mRNA_F-serratus_M_contig989.21172.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 229 bits (585), Expect = 6.440e-66 Identity = 132/371 (35.58%), Postives = 204/371 (54.99%), Query Frame = 1 Query: 7 VNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKA-SLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 V R V+ TK VF +K + G + ++K R +A GF Q+ G+ + E+ + + SIR+ L+V + QLDV+ AFL AD+ E++Y+E P+G + ++V L KA+YGL AG W K G LI GF+ +D C++ + G I +YVDD++V T+ + + + F IK+LG + + LG I DR R + +Q Y +T+ ERF + + P ++ LS+ADGP++D + A M PYR +G L +VA TRPD+A+ L++F +N GP HW A ++ L+YLK T G++ GG E + D D + D RSVSG +M+ GG I + ++ Q A Sbjct: 29 VKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVA 398
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A6H5H5A7_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H5A7_9HEMI) HSP 1 Score: 233 bits (594), Expect = 6.990e-66 Identity = 145/403 (35.98%), Postives = 216/403 (53.60%), Query Frame = 1 Query: 1 KVVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRD-------SPN-----------------------QVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMK-LSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 K+V+RPK K ++G++ V K K+ DG VE+ K R +AKGF Q +G + E+ +P SSIR +A+ + D E QLDV AFL D++E +Y+E+PD +++ PN +V LQK++YGL AG W K ++ GF++S +DPCV+ H G +I+ +YVDDL + S+ K+ L +F +K LG+I Y LG T++ Q++Y Q V +RFG + I PM + L K D + M +PY++ +G+LM++A TRPD+AYT + L++F N+ +HW A + L+YLK TA G+ T+ K L + D D A+C RS SG LGG AI+W +R QR A Sbjct: 196 KIVDRPKDKNIIGSRVVLKEKLKADGTVERKKARLVAKGFNQRQGEDFNETFAPVVRMSSIRTIMALAVEHDLELHQLDVTTAFLNGDLSERIYMEIPDNFQEILAEIIEDPNSLEDVVHQANQMLKTLQKTRKGEKVCLLQKSLYGLKQAGRQWHLKLHENVMKLGFKQSYSDPCVYY-SHRGNDTLILAIYVDDLWLGSQNKKWIEEMKGILIKTFKMKYLGKIHYGLGIEFTQNLSEGKICMSQKKYIQDVLKRFGMEDSKPISTPM-EVGLKLTRPEKLDEGV--MSKYPYQKLIGSLMYLAVSTRPDIAYTVNWLSQFNSNYTEQHWLAAKRVLRYLKGTAKKGIEF---TKTKKPLRGFADADWANCASDRRSYSGFFFELGGAAITWEARKQRTVA 591
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK) HSP 1 Score: 233 bits (594), Expect = 7.130e-66 Identity = 139/375 (37.07%), Postives = 208/375 (55.47%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--RDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTS--VIPVPMGKASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 +V+ P+ +G K ++KRK G DG+VE +K R +AKGF Q +GI Y E+ SP SIR+ LA+ A D+E Q+DV+ AFL + EE+Y+ PDG+ + ++V L K++YGL A W+++F + GFE++ ++PCV+ K+ KVVV +V+YVDD+L++ + E L F +KDLG ++ LG I RDRK + Q Y V RF + ++P+ GK LS+ PK E+ M PY AVG+LM+ TRPD+ Y ++++ N G EHW AV L+YLKRT + + + ++ + + D+D + D +S SG L GGAI W S Q A Sbjct: 167 LVDAPEQIRPIGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY--TSNDLVIQGYTDSDFQADRDMLKSTSGSVFTLNGGAIVWRSIKQSSIA 536
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A2P6SKU2_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SKU2_ROSCH) HSP 1 Score: 238 bits (607), Expect = 1.160e-65 Identity = 136/374 (36.36%), Postives = 207/374 (55.35%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKAS-LSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATEN-MKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V++P +G K VFK K DG+VE+YK R +AKG+ Q +GI Y E+ SP T+ + R+ +A++A D E Q+DV+ AFL D+ EE+Y+ P+G+ + ++V L+K++YGL A W KF + GF ++ D C++ K G +++++YVDD+L+ S L S F +KD+GE Y LG ITR+RK Q+ Y + +RFG + P+ K L + PKN E +M PY VG+LM+ TRPD+++ + L++F N G EHW A K L+YLK+T + E +++ A+ D + S D +S SG +L GGAISW + Q +TAT Sbjct: 536 LVDKPCNAKPIGCKWVFKTKKDADGKVERYKARLVAKGYNQKEGIDYNETFSPVSTKDAFRVVMALVAHFDLELHQMDVKTAFLNGDLHEEIYMLQPEGFAEDESKVCKLKKSIYGLKQASRQWYLKFDKVITQFGFLENKLDECIYL-KTSGSNFILLILYVDDILLASSNICLLKETKAFLLSQFDMKDMGEAHYVLGIEITRNRKQYALGLSQKNYVDKILQRFGMQGCKSGDAPISKGDRLHKGQCPKNVLEAESMKNVPYARLVGSLMYAQICTRPDISFAVNMLSRFQSNGGHEHWIAGKKVLRYLKKTKDHMLVYRKIDEQELEVEAYTDASYKSDMDDLKSTSGYIFLLAGGAISWKTAKQTLTAT 908
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA) HSP 1 Score: 231 bits (590), Expect = 1.240e-65 Identity = 135/382 (35.34%), Postives = 205/382 (53.66%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELP----------DGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKA-SLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 +V+RP GK ++ +K + K Q+G +EK K R +AKGF Q GI Y E+ +P ++IR+ +A+ A++ E QLD A+L + E+Y++LP + + + ++V L+KA+YGL +G LW +K +L G S++DPC++ + +++I +YVDDL+V KQ R ++L SSF +KDLG I LG + K T T Q RY + RF + P + L + PK + E + PY+ VG+LM++A TRPD+A+ L++F N+G +HW A + L+YLK T +LG++ T N L + D D S D RS +G A L AISW SR QR A Sbjct: 124 IVDRPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTYNN-NNTIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCKEMCPKTEEEKLSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFT-RTRNFSLEGFADADWGSNIDDRRSYTGFAFTLANAAISWESRKQRTVA 503 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig989.21172.1 >prot_F-serratus_M_contig989.21172.1 ID=prot_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=polypeptide|length=267bp MYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVback to top mRNA from alignment at F-serratus_M_contig989:297100..298526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig989.21172.1 ID=mRNA_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=mRNA|length=1427bp|location=Sequence derived from alignment at F-serratus_M_contig989:297100..298526+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig989:297100..298526+ >mRNA_F-serratus_M_contig989.21172.1 ID=mRNA_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=CDS|length=1602bp|location=Sequence derived from alignment at F-serratus_M_contig989:297100..298526+ (Fucus serratus male)back to top |