mRNA_F-serratus_M_contig989.21172.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A438GMM1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GMM1_VITVI) HSP 1 Score: 241 bits (614), Expect = 2.690e-67 Identity = 142/375 (37.87%), Postives = 206/375 (54.93%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRADG-PKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V P G +G K VFK K G +E+YK R +AKGF Q +GI Y E+ SP + S+R+ LA++A D E +Q+DV+ FL ++ EE+Y++ P+G+ S + V L+K++YGL A W KF + + GF + D C++ K G V +V+YVDD+L+ + K H + L +F +KD+GE SY +G I RDR Q+ Y V ERF + S P+ K D PKND E M PY AVG+LM+ TRPD+A+ L ++ N G +HWKA K ++YL+ T + T N+++ + D+D A C D+ +S SG +L GGAISW S Q +TAT Sbjct: 381 LVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFGFVENVMDQCIYL-KVSGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTAT 753
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA) HSP 1 Score: 235 bits (600), Expect = 3.730e-67 Identity = 139/376 (36.97%), Postives = 214/376 (56.91%), Query Frame = 1 Query: 1 KVVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMG-KASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMK-LSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 K+V PKGK L +K +FK K G +E+YK R + +G+ QIK I Y+E +P S+R+ LA++A DWE Q DV+ AFL D+ EE+Y+ P+G ++ + V L +A+YGL A W KK L +KGF + +D C++ R G V II +YVDDLL++++T L + F KD+G + + LG + R+R +T + DQ YA+ V E+F + + P LS+ + PKN+ E A M YR VG+LM++ +RPD+A+ ++K+ ++ G HW A + L+Y+K T G+ G + K L+A+VD+D+A DT RSVSG + +G AI++ ++QR A Sbjct: 74 KLVKLPKGKRALTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKEDLVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVRTG-GSGVAIIGIYVDDLLLIADTASRIQEMKSMLSAGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQLNPCKTPCDPNVILSKENCPKNEDERAQMKNKDYRGLVGSLMYLMTGSRPDIAFGIQCVSKYLNDPGLAHWNAAKRILRYVKGTIGYGLVIDGRSRTGKQLTAFVDSDYAKDIDTRRSVSGYVMQMGDCAITYSCKSQRTVA 448
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A438J7E3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J7E3_VITVI) HSP 1 Score: 244 bits (622), Expect = 4.240e-67 Identity = 143/375 (38.13%), Postives = 208/375 (55.47%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRADG-PKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V+ P G +G K VFK K G +E+YK R +AKGF Q +GI Y E+ SP + S+R+ LA++A D E +Q+DV+ AFL ++ EE+Y++ P+G+ S + V L+K++YGL A W KF + + GF + D C++ K G V +V+YVDD+L+ + K H + L +F +KD+GE SY +G I RDR Q+ Y V ERF + S P+ K D PKND E M PY AVG+LM+ TRPD+A+ L ++ N G +HWKA K ++YL+ T + T N+++ + D+D A C D+ +S SG +L GGAISW S Q +TAT Sbjct: 1035 LVDLPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVSKLKKSIYGLKQASRQWYLKFHNIISSFGFVENVMDQCIYL-KVSGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFVVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTAT 1407
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 231 bits (590), Expect = 5.880e-67 Identity = 127/368 (34.51%), Postives = 205/368 (55.71%), Query Frame = 1 Query: 16 PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSA-WVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 P G+ +G K VF +K +DG + +YK R +A+G+ QI G+ Y E+ +P S+ AL + A D E Q+DV+ A+L ++ EE+Y+ P+GY D +V L+K +YGL +G W+ +F +L + GF + +AD CV++R G++ II V+VDDLL+ SET +D +L + F +KDLGE +G I RDR+ T + Q++Y + V RFG + + + + + A+ A + G Y+ +G+L++ A TRPD+++ L +F N GPEHW A+ + +YL T +L + E +S + D AS PD +S+SG ++GG + +W S+ Q A Sbjct: 10 PAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVILKKRTDDLIADPAMVGG--YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQSTVA 374
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A2N9EBY4_FAGSY (Integrase catalytic domain-containing protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EBY4_FAGSY) HSP 1 Score: 243 bits (619), Expect = 5.990e-67 Identity = 140/375 (37.33%), Postives = 211/375 (56.27%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKAS-LSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V+ P G +G K VFK K G++E+YK R +AKGF Q +G+ Y+E+ SP ++ S R+ +A++A D+E Q+DV+ AFL D+TE++Y+ PDG++ S + V L+K++YGL A W KF + + GF+ + D C++ K G ++ +V+YVDD+L+ S L +F +KDLGE S+ LG I RDR Q+ Y V ERF + P+ K LS+ P+ND E M PY AVG+LM+ TRPD+A+ L +F + +HW+A K L+YL+RT +T + + +++ + D D+A C D +S SG ML GGAISW S Q +TA+ Sbjct: 670 LVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPSMDHWRAAKKVLRYLQRTKDFMLTYRHS-DLLEVVGYADADYAGCADDLKSTSGYVFMLAGGAISWKSVKQTLTAS 1042
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A5N6QA02_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6QA02_9ASTR) HSP 1 Score: 240 bits (613), Expect = 7.820e-67 Identity = 140/375 (37.33%), Postives = 209/375 (55.73%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRA-DGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V P G +G K VFK K+ +G +E++K R +AKGF Q +GI YQE+ SP + S+R+ +A++A D E Q+DV+ AFL D+ E+++++ P+G+ + V L+K++YGL A W KF + GF ++Q D C + K G I+V+YVDD+L+ S + H + L +F +KDLGE SY +G I RDR Q+ Y V R+ + S P+ K + + PK +AE A M PY VG+LM+ TRPD+AY A L ++ N G +HWKA K L+YL+ T +T ++N+++ + D+D A C D +S SG ML GG ISW S Q++T T Sbjct: 445 LVELPNGVKPVGCKWVFKTKLDPNGNIERFKARLVAKGFTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLYEDVFMKQPEGFMPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKKHGFLKNQVDQCTYL-KMSGSNFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVNGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDVFGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTYR-RSDNLEVVGYSDSDFAKCKDDKKSTSGYIFMLAGGPISWKSHKQQLTTT 817
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A5N6MU84_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A5N6MU84_9ASTR) HSP 1 Score: 231 bits (589), Expect = 1.310e-66 Identity = 136/374 (36.36%), Postives = 205/374 (54.81%), Query Frame = 1 Query: 7 VNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKASLSRA-DGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 V P G +G K VFK K+ +G +E++K R +AKGF Q + I YQE+ SP + S+R+ +A++A D E Q+DV+ AFL D+ E+++++ P+G+ + V L+K++YGL A W KF + GF ++Q D C + K G I+V+YVDD+L+ S + H + L +F +KDLGE SY +G I RDR + Q+ Y V R+ + S P+ K + + PK +AE A M PY VG+LM+ TRPD+AY L ++ N G +HWKA K L+YL+ T +T ++N+++ + D+D A C D +S SG ML ISW S Q++T T Sbjct: 10 VELPNGVKPVGCKWVFKTKLDPNGNIERFKARLVAKGFTQKERIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLYEDVFMKQPEGFMPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKKHGFLKNQVDQCTYL-KMSGSNFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVSGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDVFGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIFGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTYR-RSDNLEVVGYSDSDFAKCKDDKKSTSGSIFMLADEPISWKSHKQQLTTT 381
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW) HSP 1 Score: 241 bits (614), Expect = 4.100e-66 Identity = 136/374 (36.36%), Postives = 209/374 (55.88%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS--PNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPM-GKASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 +V+ G+ +G K +FK+K DG+V +K R +AKGF Q G+ Y E+ SP SIR+ LA+ A D+E Q+DV+ AFL +TE++Y+ P+G+ D+ PN+V L++++YGL A W+ F ++ GF RS+ + CV+ K G +V +V+YVDD+L++ L F +KDLGE +Y LG I RDRK R Q Y + V +RF + +P+ A LS+ P D EIA M PY AVG++M+ TRPD+A+ ++++ N G HW AV L+YL+RT ++ + GG+ + +++ + D + D+ RS SG +L GGA++W S Q A Sbjct: 812 LVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYV-KASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGS-DTLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVA 1183
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A151S6Y9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S6Y9_CAJCA) HSP 1 Score: 229 bits (584), Expect = 4.370e-66 Identity = 135/374 (36.10%), Postives = 199/374 (53.21%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--RDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTSVIPVPMGKA-SLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITA 1116 +V PKGK L + +FK K + YK R + KGFRQ KG+ + E SP SSIR L++ LD E ++DV+ FL D+ EE+Y++ PDG+ + V L+K++YGL A W KKF + + ++++ +D CVF RK +I+++YVDD+L++ + R + L SF +KD+G LG I RDRK + Q+ Y Q V +RF + P+ LS P N+ E M PY AVG+LM+ TRPD+A+ T+++F N G EHW AV L+YL+ T+ L + GG + L + D+D A D+ +S SG V GG ++W SR Q+ A Sbjct: 42 LVKLPKGKRALENRWIFKVKQESNSTSPIYKARLVVKGFRQRKGVDFNEIFSPVVRMSSIRTMLSLATTLDLEVEKMDVKTIFLHGDLEEEIYMKQPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQDYKKTTSDHCVFVRKFSDDDFIILLLYVDDMLIVGKDVSKIDRLKKQLGESFSMKDMGAAKKILGISIIRDRKDKKLWLSQEHYIQNVLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKLYFGG--DKPTLVGYSDSDMAGDIDSRKSTSGYLVKFAGGVVAWQSRLQKCVA 413
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Match: A0A438GI73_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GI73_VITVI) HSP 1 Score: 240 bits (613), Expect = 5.900e-66 Identity = 144/377 (38.20%), Postives = 212/377 (56.23%), Query Frame = 1 Query: 4 VVNRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFMAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTGTFDQQRYAQTVTERFGTRKTS--VIPVPMG-KASLSRADGPKNDAEIAAMHGFPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNHGPEHWKAVLKALQYLKRTASLGVTCGGATENMKLSAWVDTDHASCPDTHRSVSGGAVMLGGGAISWFSRAQRITAT 1119 +V P G +G K VFK K G +E+YK R +AKGF Q +GI Y E+ SP + S+R+ LA++A D E +Q+DV+ AFL ++ EE+Y++ P+G+ S + V L+K++YGL A W KF + + GF + D C++ K G V +V+YVDD+L+ + K H + L +F +KD+GE SY +G I RDR Q+ Y V ERF + S V P+ G + +L++ PKND E M PY AVG+LM+ TRPD+A+ L ++ N G +HWKA K ++YL+ T + T N+++ + D+D A C D+ +S SG +L GGAISW S Q +TAT Sbjct: 857 LVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFGFVENVMDQCIYL-KVSGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLNQC--PKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTAT 1229 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig989.21172.1 >prot_F-serratus_M_contig989.21172.1 ID=prot_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=polypeptide|length=267bp MYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVback to top mRNA from alignment at F-serratus_M_contig989:297100..298526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig989.21172.1 ID=mRNA_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=mRNA|length=1427bp|location=Sequence derived from alignment at F-serratus_M_contig989:297100..298526+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig989:297100..298526+ >mRNA_F-serratus_M_contig989.21172.1 ID=mRNA_F-serratus_M_contig989.21172.1|Name=mRNA_F-serratus_M_contig989.21172.1|organism=Fucus serratus male|type=CDS|length=1602bp|location=Sequence derived from alignment at F-serratus_M_contig989:297100..298526+ (Fucus serratus male)back to top |