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Homology
BLAST of mRNA_F-serratus_M_contig989.21170.1 vs. uniprot
Match: H3GNU7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNU7_PHYRM) HSP 1 Score: 88.2 bits (217), Expect = 1.970e-15 Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 3
Query: 3 RYVGKLGGLYPTD-DLEAAKCDAVLDSTVDFGMHMRPSFMEKDEAKKMAMREELAASFIPTWLGNMEKRLEQTE--GLYFLDKMTVADIAVANRVRTLKAGVFDGIPPSIVDICPKLVALTEAILAEPKIAEF 392
RY G+LGGLYPT AAK D +L + + G M PSF EKDE KK AMREELA +P + ++ RLE+ ++ +K+ V ++ + +++ ++G+ D I P+++D L A + + PK+ E+
Sbjct: 72 RYAGRLGGLYPTSAPFAAAKVDEMLHALAEMGEQMMPSFSEKDEDKKKAMREELATVTLPRYAAQLDARLEKMRLMPVFQSEKVFVHELTIYQWMKSFRSGMIDYISPTVLDGYELLNATFDKVAKHPKVVEW 204
BLAST of mRNA_F-serratus_M_contig989.21170.1 vs. uniprot
Match: W4G8Z8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8Z8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.170e-15 Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 3
Query: 3 RYVGKLGGLYPTDD-LEAAKCDAVLDSTVDFGMHMRPSFMEKDEAKKMAMREELAASFIPTWLGNMEKRLEQTE---GLYFLDKMTVADIAVANRVRTLKAGVFDGIPPSIVDICPKLVALTEAILAEPKI 383
RYVG+L GLYP ++ L+A K D ++D D PS E+D AKK AMRE L +P +E RL + G ++LDK+++AD+AV V +K G IP ++ D P+++A+ EA+ A P +
Sbjct: 75 RYVGRLAGLYPLENALDALKVDELVDFIEDINQLFVPSRNEQDPAKKKAMREALGTHEVPKHFALLEARLRLSSSAAGPWYLDKLSLADVAVYAAVVMIKTGFTMHIPTTLCDEHPRMLAIYEAVGAHPNV 205
BLAST of mRNA_F-serratus_M_contig989.21170.1 vs. uniprot
Match: A0A523PBZ5_9PROT (Glutathione S-transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PBZ5_9PROT) HSP 1 Score: 82.4 bits (202), Expect = 1.260e-14 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 3 RYVGKLGGLYPTDDLEAAKCDAVLDSTVDFGMHMRPSFMEKDEAKKMAMREELAASFIPTWLGNMEKRLEQTEGLYFLDK-MTVADIAVANRVRTLKAGVFDGIPPSIVD-ICPKLVALTEAILAEPKIAEFLA 398
RYVGK+ GLYP DDL+A CD VL + D ++ +F +DE ++A RE+L ++ +L ++K L + G YF D +TVAD+ + R+L++G D +P +V + P LV E I ++P++ + A
Sbjct: 70 RYVGKMAGLYPEDDLQALYCDEVLGALEDLSHYIVQTFGLQDEELRLA-REKLVDGWLSVYLRGLDKLLARGGGEYFADNGLTVADLKSFVQTRSLRSGNLDYVPKDLVQRLAPGLVEHQERIESDPRVVAYYA 202
BLAST of mRNA_F-serratus_M_contig989.21170.1 vs. uniprot
Match: A0A7Y3G0D8_9GAMM (Glutathione S-transferase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3G0D8_9GAMM) HSP 1 Score: 82.0 bits (201), Expect = 1.870e-14 Identity = 49/135 (36.30%), Postives = 81/135 (60.00%), Query Frame = 3
Query: 3 RYVGKLGGLYPTDDLEAAKCDAVLDSTVDFGMHMRPSF-MEKDEAKKMAMREELAASFIPTWLGNMEKRLEQTEGLYFLD-KMTVADIAVANRVRTLKAGVFDGIPPSIVD-ICPKLVALTEAILAEPKIAEFLA 398
RY+GK+ GLYP DDL+A CD +D+ D + +F ++ DE K+ RE+LA ++ +L +++ L + G +F D +MTVAD+ V + R+L AG D +P IV+ + P LV + I ++P++ + A
Sbjct: 70 RYIGKMAGLYPDDDLQALYCDEAMDAIEDLLHDIVATFGLQGDELKRA--REKLADGWLSVYLRGLDELLTRGGGNFFADNRMTVADLKVFMQTRSLLAGTLDHVPADIVERLAPGLVGHKKRIESDPRVVAYYA 202
BLAST of mRNA_F-serratus_M_contig989.21170.1 vs. uniprot
Match: C1MRJ0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MRJ0_MICPC) HSP 1 Score: 82.8 bits (203), Expect = 2.000e-14 Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 3
Query: 6 YVGKLGGLYPTDDLEAAKCDAVLDSTVDFGMHMRPSF---MEK---DEAKKMA---MREELAASFIPTWLGNMEKRLEQTEGLYFLDKMTVADIAVANRVRTLKAGVFDGIPPSIVDICPKLVALTEAILAEPKIAEFLAKT 404
+ G + GL P D ++A + + + D +RPS M+K D KK MREE+A + IP +LG+ EK LE +E L DK+TVAD V + +R L G D IPP+ V+ PKL AL + + A P+IAE+L KT
Sbjct: 104 WAGTITGLTPRDPIKAMRVNEACELDNDLRGKIRPSIYVGMDKSLGDREKKRKVKEMREEIAKTHIPFYLGHFEKMLEDSEYLCG-DKVTVADCQVLSTLRWLGGGGLDHIPPTCVEAFPKLCALKKKMEAMPEIAEYLEKT 244
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 75.9 |
Seed ortholog evalue | 1.3e-11 |
Seed eggNOG ortholog | 157072.XP_008864522.1 |
KEGG rclass | RC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 |
KEGG ko | ko:K00799,ko:K04097 |
KEGG TC | 1.A.12.2.2,1.A.12.3.2 |
KEGG Reaction | R02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 |
KEGG Pathway | ko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418 |
Hectar predicted targeting category | other localisation |
GOs | GO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643 |
EggNOG free text desc. | glutathione transferase activity |
EggNOG OGs | KOG1695@1,KOG1695@2759 |
EC | 2.5.1.18,5.3.99.2 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko02000 |
Exons | 5 |
Model size | 1218 |
Cds size | 324 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932778.6737041-UTR-F-serratus_M_contig989:270271..271070 | 1622932778.6737041-UTR-F-serratus_M_contig989:270271..271070 | Fucus serratus male | UTR | F-serratus_M_contig989 270272..271070 - |
1690964470.5899441-UTR-F-serratus_M_contig989:270271..271070 | 1690964470.5899441-UTR-F-serratus_M_contig989:270271..271070 | Fucus serratus male | UTR | F-serratus_M_contig989 270272..271070 - |
1622932778.7887347-UTR-F-serratus_M_contig989:273835..273906 | 1622932778.7887347-UTR-F-serratus_M_contig989:273835..273906 | Fucus serratus male | UTR | F-serratus_M_contig989 273836..273906 - |
1690964470.6603174-UTR-F-serratus_M_contig989:273835..273906 | 1690964470.6603174-UTR-F-serratus_M_contig989:273835..273906 | Fucus serratus male | UTR | F-serratus_M_contig989 273836..273906 - |
1622932778.8141272-UTR-F-serratus_M_contig989:274389..274413 | 1622932778.8141272-UTR-F-serratus_M_contig989:274389..274413 | Fucus serratus male | UTR | F-serratus_M_contig989 274390..274413 - |
1690964470.6727068-UTR-F-serratus_M_contig989:274389..274413 | 1690964470.6727068-UTR-F-serratus_M_contig989:274389..274413 | Fucus serratus male | UTR | F-serratus_M_contig989 274390..274413 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932778.7005265-CDS-F-serratus_M_contig989:271070..271247 | 1622932778.7005265-CDS-F-serratus_M_contig989:271070..271247 | Fucus serratus male | CDS | F-serratus_M_contig989 271071..271247 - |
1690964470.615019-CDS-F-serratus_M_contig989:271070..271247 | 1690964470.615019-CDS-F-serratus_M_contig989:271070..271247 | Fucus serratus male | CDS | F-serratus_M_contig989 271071..271247 - |
1622932778.7249782-CDS-F-serratus_M_contig989:271423..271484 | 1622932778.7249782-CDS-F-serratus_M_contig989:271423..271484 | Fucus serratus male | CDS | F-serratus_M_contig989 271424..271484 - |
1690964470.6259353-CDS-F-serratus_M_contig989:271423..271484 | 1690964470.6259353-CDS-F-serratus_M_contig989:271423..271484 | Fucus serratus male | CDS | F-serratus_M_contig989 271424..271484 - |
1622932778.7425568-CDS-F-serratus_M_contig989:272205..272246 | 1622932778.7425568-CDS-F-serratus_M_contig989:272205..272246 | Fucus serratus male | CDS | F-serratus_M_contig989 272206..272246 - |
1690964470.6363509-CDS-F-serratus_M_contig989:272205..272246 | 1690964470.6363509-CDS-F-serratus_M_contig989:272205..272246 | Fucus serratus male | CDS | F-serratus_M_contig989 272206..272246 - |
1622932778.7663898-CDS-F-serratus_M_contig989:273790..273835 | 1622932778.7663898-CDS-F-serratus_M_contig989:273790..273835 | Fucus serratus male | CDS | F-serratus_M_contig989 273791..273835 - |
1690964470.6472337-CDS-F-serratus_M_contig989:273790..273835 | 1690964470.6472337-CDS-F-serratus_M_contig989:273790..273835 | Fucus serratus male | CDS | F-serratus_M_contig989 273791..273835 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig989.21170.1 >prot_F-serratus_M_contig989.21170.1 ID=prot_F-serratus_M_contig989.21170.1|Name=mRNA_F-serratus_M_contig989.21170.1|organism=Fucus serratus male|type=polypeptide|length=108bp
MHMRPSFMEKDEAKKMAMREELAASFIPTWLGNMEKRLEQTEGLYFLDKM TVADIAVANRVRTLKAGVFDGIPPSIVDICPKLVALTEAILAEPKIAEFL AKTGTSK* back to topmRNA from alignment at F-serratus_M_contig989:270272..274413- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig989.21170.1 ID=mRNA_F-serratus_M_contig989.21170.1|Name=mRNA_F-serratus_M_contig989.21170.1|organism=Fucus serratus male|type=mRNA|length=4142bp|location=Sequence derived from alignment at F-serratus_M_contig989:270272..274413- (Fucus serratus male) TCCGCTACGTCGGGAAGCTTGGAGGTGAGAAGCGAAAATATTTACCAAGG
CCAGGGGTTTTGGGACTTATGCGTCTTCCGCGCGCTGTCCGGCTCCGACT
TCCGCAGCGCGTTGGCCGTCTGACATTCACAGAAGACGAAAGAAACTCGA
GCACAGAGTGTCCCTCCCTCTACTCGCGTTCTCCCAACAGTCTCTTCTCC
CATGTGCACGCTCCAAGCTTTTCCCCATGCATACCCCACCGTCGCATTCC
TTCTTGCGCACCTGAGCGACGTCTAACTTTATGTTGAGCTTGCTTTCCAA
GGAATGGTACAGTTGCTGAAGTAGCACGGCCCCATCGGGACGAACTGCTT
CTGCCCCATTCCCAATTTTTCTGCCTACATTCAAGTACACGTAGGGTAAG
ATATGTTTCTATATATATATATATACCATTGTGCCAACTTTACATGCTGG
CCCGTTATATTTAGTGAGCTGGGCTGAAAAAATTATTATCGTCCGTTCAT
ATCTCAGGACTGTACCCTACCGATGACCTCGAAGCTGCCAAGTGCGACGC
CGTGCTTGACTCCACCGTCGACTTTGGGATGCACATGCGCCCCTCGTTCA
TGGAGAAAGACGAAGCCAAGAAGGTGAGTGGGGGGAATGCGTACAAGCAC
TGCACCATGGCTTGGTCCCAGAGCGCATGATGGCGAAACTGCCACGTTTT
ACCTAAATTTCTACAGGAAGTCTCAGTTGTTGATTTCATATAATTCTTGG
GTCGCTCACTGTGTCGATATGCATTCATCGCCCGCAGAATAGACGCGACT
ATGGCATGTACTCCCCACTAGATGGCGAACATGTTACGGTTGGTACTGCG
CTGGACGGCTGTGTGAAGCTCCGGTTCTAGGCGACACGATATCCGGTTAC
AGTATAATTTACTGATATGGCTAAAGAAAACGAGGCTCCCCGGATTCTCG
CTGAGTTATCCTTGGAGTATAATTTTTTTTATATTCGGAAGGCCTACAGT
AGCGTAATAGTCTTGAGAGAACGTTCACCCCCCACGCACCACACCACCCA
AGCCCCCTCCCAAAGGAAAAAGTTAAAAGTTTTCAGCGGGAGTGACACTT
TCAAAAAGTATTTTAGTGGAGAATACACTAAAGGTTGGGACAACATAATT
ACTTATTTCCACGAAAAGTTTTCTCGATGTTCGATATAATAGGTCTGTCC
TTGGCTCGGCGTCATGATGATATTTTAAGTTTGACTGGCTACGATTATAG
CTTTTGTTGTGCGTTGTTTCCGTCGGATCCTTTCCCCCCCCCTCACCTTT
TCAAAAGGCCCTCTGAAATTTTCGTCGCATTTTTCTTTAAACTCATAACA
AAAGCTCTAATATTTGTAGCCAGTCAAACTTGAAATATCATGACGCAGAG
CCAAGGACACACCTATTATGTCCAACATCGAGAAAATATTTTCGTGGAAA
TAAATAATTATGTTTTCCCAACCTCTAGTGTTTCCTCCAATGAAAGACTT
TTTTGAAAATGTCACTTCCGCTGAAAACGTTTTTCTTAGGGGGGGGCTGG
GGGGTTGAACGTTTTCTTAAAGACTAGATTATTACGCCAATGTTTCATTG
TTTATTTTACAGTTTCATTGTTTCAGTACAGAAGTGAGAGCGTGAGTAAG
CGTAGTTTTACCGTGTTGACTCGCGAGGTGTAGAGAATGCTGAACTTGGC
CGCGCGATTAAAAATAAAAAACGAAGGCGTGACTCGGAAAGAGTTTGAGT
AGGTCCTTAGTGTCCACAGGCGAGATGAGCGGGTGGAATCGGTACTGTAA
CCTTTAGTAAAATTGTGGCACGTTAAGTGGCACCATCAGCAGAGAGTGAA
AGGGAAAAGCAGCCCCCCCGTGGGTCCTCCACGTGATGAATTATTTTATT
CAACACCTTCGGAATGCGCACTCTTCTATCCCCCCACATATATGATTGCG
CTGTTATGTACAGTACAGTACAGATCAATCAAGCACACACCTCTCCCACA
AGTTTGGTAAAAAAACTTTTTCAGCATAGATCGAATAATATTATTATTAG
TACGACTGGGTCGGATCGTAAGTTATTTCCAACTTCCACGTGTGCACACT
GATCTCGTCTTCCGCCTTTGTACCATACATACCTCTTTCGTCTTGTCTAC
GTATCATACCTCCTAAGATGGCGATGCGAGAGGAGCTTGCGGCGAGCTTC
ATCCCCACGTGAGTAACGGAACACTTTGCACGCGGCGACAAATAATGACC
AACGTGATGCTGGATCTTGCAACGTATGGCCACACACATACACATAACAT
GAGTATGGATCAAACGGGTAAGGTTGCCAATCTTGCTCGTGGCGATCTGA
ACAGGGAAAACGAATGTTTCTCTGTCCGCGTTTGCGCCTGAGGATTTGGT
CTCGCGAGACGGGTTCGGCAGTCCCATCCCGCCTCCGCCTGCTCATCTCC
ATCCTCAAGCTGAATCTGGTGCTCACTCACGGGATTCCTCCCGATTTCCA
CGGCGGCGTCCATTATCTATACCGCCATAAGCCATCGGATCAGTCCCGAG
TTTATCGGGTCACGCAATTGCGTACCGATGGCTTTCACTGCTGAGAGTAC
GCGTGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACAAGTGCTGTCT
TGGCAGGTCACCATGGACCAATTACGCCTCTTTTTCCCACACCGACTATT
GGTATGAAGTGGGCATTTTGAAAGTACCGGCTAAAAACGGTGGTTAGAGG
TGGTTGTACATCGAACGAGCTGTATATCTTTATTTTGTCGCCTAACTGGT
TTACCTCCATCTGCGTGCAGGCCAATGTGATTTCGTCCATTTGCTTGCAG
ATCGATGTAATTTCGGCTGTTTCGTTTTGGTGCTCATATATGCTCCTCCT
CCACAACCATTGGCCGCCTATCTTTGCAGCTGGCTCGGAAACATGGAGAA
ACGACTCGAACAGACCGAGGGGCTCTACTTTCTTGACAAGGTAGGAGCAT
CTCATGGGCGAGCTCGGCCGCGTCTAATTTTCAAACGACAAGTTCACAAA
CACCAAAATTGTAGACGTCTTCGCCTACGTCGTGTCAGGAAGAAGAAATG
TTCCCCTGATCCTCTGCTGACTTGTTCCGCGCCGCTCTCTCATCCCGTGC
ACTTGGATATCCACAGATGACCGTGGCTGACATTGCAGTGGCCAACCGCG
TGAGAACGCTCAAAGCCGGTGTCTTCGACGGCATTCCACCGAGTATCGTC
GACATATGCCCGAAGCTGGTGGCCCTCACTGAGGCCATCTTGGCCGAGCC
TAAGATTGCAGAGTTCCTTGCCAAGACCGGGACCTCCAAGTGAAGGGACA
CGCGGCAAACTCGCTTCCGATGGCTATGATAGTTACCATGTGATTGCTGC
AGGTTTGACCCATGCCGGTTTTTGATGTAATGGTGTGGACGATGGTAGAG
CGTGTCTGACTTCCCATCTTGCCCACGACTCCGGGTGGAGATATTACGGC
GGTATCGACGGCGTAGAACGTGACCTGAGGGCGCAATCAATATTGCCACT
GCTCCATTTGTAATATATTTTTTGCCATATGGCCGGTGAGATAGATTCGT
CGTGTGATCTTACATATACGAGCTTGTAGTTGAGGAAGTAAAACAATATA
GAAGCCTCTGAATCGTTCTGTTAAGGATATCTTTGATCTTCATCGACAAA
GCTCCCGTCCTGGAGACGAAGTGTTTCAGACATTGCCTTGGAATGGCTTC
GTCTGTAACATCCTTATCCCCAGGGGCATTTTGCTGCACACGGAGACTGC
GTGCGGTTTCCAGTCGACCTGGTCTTGAAATCTCTCATCTTCCACGTATA
CGCGCACTGTCCGAACGACTACGCCAATCGCCAGAGTATGATATCGTTTA
TTGTCGAAAAGGAAAGTTCGCTCATCGCCTCTTCATTCTAATGTTTTATA
GACCCAAGCGGGTGCGAAGAGCACGACAACCTCGTGCCATCCTGTATGTA
TGGTAACCATATATAGCAGAGTATGGATAATCGGGAAATATTGCCAATCC
TGCTCGTGGTCAGTCCCGAGCTTATCGGGTCACGCAATTGCGTACCGATG
GCGTTCACTGCCGAAAGTTCGCCGGCGCAGGGTCAGTAGTCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig989:270272..274413- >mRNA_F-serratus_M_contig989.21170.1 ID=mRNA_F-serratus_M_contig989.21170.1|Name=mRNA_F-serratus_M_contig989.21170.1|organism=Fucus serratus male|type=CDS|length=648bp|location=Sequence derived from alignment at F-serratus_M_contig989:270272..274413- (Fucus serratus male) ATGCACATGCGCCCCTCGTTCATGGAGAAAGACGAAGCCAAGAAGATGCA CATGCGCCCCTCGTTCATGGAGAAAGACGAAGCCAAGAAGATGGCGATGC GAGAGGAGCTTGCGGCGAGCTTCATCCCCACATGGCGATGCGAGAGGAGC TTGCGGCGAGCTTCATCCCCACCTGGCTCGGAAACATGGAGAAACGACTC GAACAGACCGAGGGGCTCTACTTTCTTGACAAGCTGGCTCGGAAACATGG AGAAACGACTCGAACAGACCGAGGGGCTCTACTTTCTTGACAAGATGACC GTGGCTGACATTGCAGTGGCCAACCGCGTGAGAACGCTCAAAGCCGGTGT CTTCGACGGCATTCCACCGAGTATCGTCGACATATGCCCGAAGCTGGTGG CCCTCACTGAGGCCATCTTGGCCGAGCCTAAGATTGCAGAGTTCCTTGCC AAGACCGGGACCTCCAAGTGAATGACCGTGGCTGACATTGCAGTGGCCAA CCGCGTGAGAACGCTCAAAGCCGGTGTCTTCGACGGCATTCCACCGAGTA TCGTCGACATATGCCCGAAGCTGGTGGCCCTCACTGAGGCCATCTTGGCC GAGCCTAAGATTGCAGAGTTCCTTGCCAAGACCGGGACCTCCAAGTGA back to top
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