mRNA_F-serratus_M_contig989.21168.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 142 bits (358), Expect = 2.340e-30 Identity = 153/501 (30.54%), Postives = 228/501 (45.51%), Query Frame = 1 Query: 1519 ETAPVMGSGISFVQEMLEPELAGLRAK-NCAGPLAQAVHFRHQ--EFICSPLVVDYLRLKFSAGLPNPFRETDWRRENGRTDRDLARFMLDEDESKLMVYVLQGGCADSPRRVKGG------------DKEKYWTFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFD-FAVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVL---SEALIITQYRRAMRSDSLPSPLNVPQ-------ELICHLFWWNKER-AKELFARGMFWLITGPVAIAATAVLWAVSLP 2940 +T + G++ +LEPE A + GPLA+A+ H+ F +PL ++++ LKF+ GLP +G + L + LD E L C P + GG D+ TF PG FI G+V+ +++ VP MR+ALD V++ + F +V++ + G LT E+ + IYVV AI L E + + + W LV A + R S +Y A +P + ++L+ Q+ S G + L+ M S+L +F +M V ILGFA++F++LF ET +LL F +MLG F F G A VLLV +L +M + LLNLLIA+L+T H KVE EAVL S A + T YR + +D+LP+P N+ Q +++ LF N A+ R +FWL+ GP AI +W VS P Sbjct: 513 QTVCGLSGGMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPAL--------NDGHSVLILEKSRLDVREEAKGHESLTALC---PGSILGGFLPRVGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLF-EKGSLTIAEMAFAIYVVAAI--MLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARA------------IDSDSSWGRGLY------AVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKG-----------ETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVE-----EAVLIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGPGAILGGIFVWLVSTP 965
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.710e-30 Identity = 150/496 (30.24%), Postives = 229/496 (46.17%), Query Frame = 1 Query: 1534 MGSGISFVQEMLEPELAGLRAK-NCAGPLAQAVHFRHQ--EFICSPLVVDYLRLKFSAGLPNPFRETDWRRENGRTDRDLARFMLDEDESKLMVYVLQGGCADSPRRVKGG------------DKEKYWTFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFD-FAVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVL---SEALIITQYRRAMRSDSLPSPLNVPQ-------ELICHLFWWNKER-AKELFARGMFWLITGPVAIAATAVLWAVSLP 2940 + G++ +LEPE+A + GPLA+A+ H+ F +PL ++++ LKF+ GLP ++G + L + LD E L C P + GG D+ TF PG FI G+V+ +++ VP MR+AL+ ++++ + F +V++ + G LT E+ + IYVV AI L E + + + W LV A + R S +Y A +P + ++L+ Q+ S G + L+ M S+L +F +M V ILGFA++F++LF ET +LL F +MLG F F G A VLLV +L +M + LLNLLIA+L+T H KVE EAVL S A + T YR + +D+LP+P N+ Q +++ LF N A+ R +FWL+ GP AI +W VS P Sbjct: 427 LSGGMAACTALLEPEVADDSSTYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPAL--------KDGHSVLILEKSRLDIREEAKGHESLTALC---PGSILGGFLPRVGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLF-EKGQLTIAEVAFAIYVVAAI--MLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARA------------IDPDSSWGRGLY------AVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKG-----------ETIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVE-----EAVLIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGPGAILGGVFVWLVSTP 874
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.320e-28 Identity = 117/393 (29.77%), Postives = 197/393 (50.13%), Query Frame = 1 Query: 1564 MLEPELAGLRAKNCAGPLAQAVHFRHQ-EFICS-PLVVDYLRLKFSAGLPNPFRETDWRRENGRTDRDLARFMLDED---ESKLMVYVLQGGCADSPRRVKGGDKEKYWTFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPW-ELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFD-FAVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKE 2721 + EPE R GPL + R Q E C+ PLV+D++ KF+ GLP+ R+T+ N + + + + + E ++ + + + +R G T+ PG +FI+AGL+S+ +++ VPA+R+ LD++ Y ++I+F V++ DAG W E+++ +Y+ G I + RE+ + + + WN ++ A+L + ++ RM+ V D QS A SAP ++LF QI S GP++ +F M LA+FG +ML+ +LGF +FYSL+ + TY +F + LG D F F G LLV++L L+ + +LNLL+A+L+T H+KV+ +A E Sbjct: 753 IFEPETVISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPS-LRDTEGVLLNNTSFTEPGQTLYGDGLLAEGRVFFFGM------ALQRSYAGGTLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFG-GFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPW--EYMRDQWNLLDVASLTLLLGGVIQRMYGQVDD---------QSSRA--------LYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETT-------------TYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLE 1105
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.930e-28 Identity = 175/691 (25.33%), Postives = 288/691 (41.68%), Query Frame = 1 Query: 1162 VRECFLGAIAASDWPTNPLIPGLNLSVALIEAIRQSPDFRQPLLE-LRADVDALVLSVLEHLPDTVAGFNRFTPTGITPADLPSKGPLRMKKSLTGLGGVEASLSSTVARGQTNKGLGAIETAPVMGSGISFVQEMLEPELAG-LRAKNCAGPLAQAVHFRH-QEFIC-SPLVVDYLRLKFSAGLPNPFRETDW---RREN-----------------------------------------------------------------GRTDRDLAR---FMLDEDESKLMVYV----LQGGCADSPRRVKGGDKEKYW--TFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFDF--AVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHL------FWWNKERAKEL--FARGMFWLITGPVAIAATAVLWAVSLPLTL--AW 2955 +++CFLG ++ D NP IPGL+LSVAL E+++ +P+ LE L+ +D L+ +VL+ LP T+A F P G+ GG E+ +LEPE+AG LR ++ GPL A+ R + +C +PL+ Y+ +F AGLP+ D R E GR RD F+ +L+ + + A +P + D E + TF PG QF+L G+++K A++ VP MR+ L V+ + ++ V + D G L+ E+ +V+ I L ++ G + + + WN +E+ +L+ + L R+ ++V+ + A SAP V +VLF Q G ++ + +F ++ +F ++ ++GF ++FY+LF ++Y L +F +MLG +++ + + VLLV++L ++ V LLNLLIA+L+T H+KV+ D S+ I+ Y R + SD LPSP N+PQ + + K K + F+ G+FWL G AI LWA S P+ + AW Sbjct: 210 MKDCFLGGLSFVD---NPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASF----PGGV--------------------GGCES---------------------------------VLEPEVAGVLRDRDFRGPLRLALQERQFSKTLCIAPLMFKYMCYRFVAGLPDLQDSNDLLGGREEKRTRTSFETSGPVRAPVASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGTRRGRKGRDFLYSDGFVAGSATERLLQGLGWTGRRAAAALTPPPERPSDWETIFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYT-AVALESDDGELSNTEIALTFHVMAEIVSNLLQMR-AGFVE-FWRDKWNWLESLSLLLLAGGLTIRI------------------RNSDVHQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFEEA-------------KSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQIAVGLVARGVDGLLGTKTCPKIMREFSVGVFWLTLGSPAILIAWGLWAASAPMAVLTAW 806
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 134 bits (338), Expect = 4.550e-28 Identity = 146/535 (27.29%), Postives = 236/535 (44.11%), Query Frame = 1 Query: 1552 FVQE-MLEPELAGLR---AKNCAGPL----AQAVHFRHQ---EFICSPLVVDYLRLKFSAGLP-----NPFRET---DWRRENGRTDRDLARFMLDE--DESK----------------------------------LMVYVLQGGCADSPRRVKGGDKEKYW------TFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTH--------------------------------------FSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLF------GSPSALLPDGGEI---SNFETYFSSLLTLFSSMLGTFDFAVFDGAPM----------AEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNV 2802 F+Q+ MLEP L + AK GP+ Q+ R EF+ SPLV+DY+ +KF+ LP NPF+ T + + DLA+ + D++K ++ VLQG D PR E W T PG+QF LAG++ K FF VP +R + Y ++++F V+ +++ + E+++ I+ G + +++ E + R H F + WN ++ +T+ I A +FRM A F E +++ AQ+F A SAP + ++L L+QI ++LGP+ ++RM S + RF A + + +L FALAF+++F P L D F T+ S +T+FSS LG + +FD AG+ ++V++ M+V LLNLLIA+L+T H +V NA+KE L+ A ++ Q +++ P PLN+ Sbjct: 63 FLQQWMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEYDDFEVYDLAKLLRGSGNDQAKGGNEPSGTPTASTGSTAGESLGSFLWQLPGSFMSFLLRVLQGW--DHPR-----SNESVWYYVPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSYLVMLVLFCSSVL-LKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRISRGLGPEVGGRVKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMIA--------RFDSEF-----DLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDPFPLRDAFGTFGDSFVTVFSSALGGPEIDLFDDVGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSAQSVAHLRPPPPLNL 576
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 132 bits (333), Expect = 3.210e-27 Identity = 115/370 (31.08%), Postives = 172/370 (46.49%), Query Frame = 1 Query: 1858 DKEKYWTFS-----PGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGS------PSALLPDGGEI---SNFETYFSSLLTLFSSMLGTFDFAVFDGAPMA----------EAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHLFWWNKERAKELFARGMFWLITGP 2895 DK K WT PG+QF LAG++ K F+ VPA+R ++ Y +YV F + WN ++T+T+ + VFRM A D H AQ+F AASAP + ++L L+QI ++LGP+ ++RM SD RF A + V +L FALAF+++F + P+ D + F T+ S +T+FS+ LG DF +++ A EAG+ L+V+++ +M V LLNLLIA+L+T HSKV N DKE L+ A +I Q R + P PLN+ + ++ L E + F R W++ P Sbjct: 1131 DKPKRWTIPHSTILPGLQFSLAGVLGKPETFYQVPAIRFVFEIFTY----------------------------LYV--------------------FYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFH--------------AQFFYAASAPLLFSRLLVLSQIDATLGPMTQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDATTEPVR--FRR---WMVRNP 1433
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 131 bits (330), Expect = 5.650e-27 Identity = 161/604 (26.66%), Postives = 261/604 (43.21%), Query Frame = 1 Query: 1207 TNPLIPGLNLSVALIEAIRQSPDFRQPLLELRADVDALVLSVLEHLPDTVAGFNRFTPTGITPADLPSKGPLRMKKSLTGLGGVEASLSSTVARGQTNKGLGAIETAPVMGSGISFVQEMLEPELAGLRA---KNCAGP-----LAQAVH--FRHQEFICSPLVVDYLRLKFSAGLPNPFRETDWRRE--------NGRTDRDLARFMLDEDE------------------SKLMVYVLQG------GCADSPR--RVKGGDKEK--YWTFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPWELLWLIYVVGAIGQQLRE-----------------------------VEETGSIRTH---------------------FSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFDFAVFDGAP-----------MAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSK 2697 +NPL+ G +S L A P R L L+ VD L+ +L+ LP TV G G+T LR L G++ T+A +G V+ +LEP L +A K GP L +A+ + +F+ SPLV+DY+ +KFS LPN + + N + + + + E ++ LQG + PR + D+ K + T P +QF LAGL+ K A F+ VPA+R AL+ L Y ++ +F V ++D+ + P E+ + +++ G + +++ E V+ S R+ F + WN ++T TL + A VFR+ G G + + ++AQ+F A SAP + ++L L+QI ++LGP++ ++RM S RFG ++V + GFALAF ++FGS A G ++ ++ ++LLT+F + LG F F FD ++AG LLV +L ++ V +LNLLIA+L+T H + Sbjct: 728 SNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQRIVDHLINQLLDKLPHTVRGM------GMT--------LLRPMVPHHRLPGLQQHRLDTLAN----------------LAGYMVVEWILEPRLLNRQATVGKRYNGPDYMDPLQRALDRGSKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEVLSVRPEPPEANPGGGSQPCNSKKWDDRLLRFLQGWNPTDMNPEEQPRGKSTRRSDRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFC-SCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLL-------GIREFGGPTDPGDYFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDA---GSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAHGE 1290
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.610e-26 Identity = 114/384 (29.69%), Postives = 178/384 (46.35%), Query Frame = 1 Query: 1876 TFSPGMQFILAGLVSKTAAFFGVPAMRLALDVLVYSGVIIVFVLKVVVIRDAGVLTPW-ELLWLIYVVGAIGQQLREVEE-----------------TGSIRTHFSNP------------------------------WNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLF------GSPSALLPDGGEI---SNFETYFSSLLTLFSSMLGTFDFAVF------------DGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELIC 2820 T PG+QF LAG+ K F+ VP +R A ++ Y ++++F V++ + PW E+ + ++ G + +++ E + GS RT P WN ++T+T+ I A +FRM A + F ++ AQ+F A SAP + ++L L+QI ++LGP+ ++RM S RF A + + +L FALAF+++F P L D F T+ S +T+F+ LG DF F +GA AG+ LLV+++ M V LLNLLIA+L+TTH KV NA+KE + A +I Q R + P PLN+ + L+C Sbjct: 983 TMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSI--PWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL-----DDKFF---------LFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDAFPLRDAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGAR--NAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIK-LVC 1347
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 113 bits (283), Expect = 3.690e-22 Identity = 113/384 (29.43%), Postives = 179/384 (46.61%), Query Frame = 1 Query: 1951 MRLALDVLVYSGVIIV---FVL---------------KVVVIRDAGVLTPWELLWLIYVVGAIGQQLREVEETGSIRTHFSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLM---------------HSL-FRMFSDLARFGALMLVFILGFALAFYSLFGSPSALLPDGGEISNFETYFSSLLTLFSSMLGTFDF-AVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHLFWW-----------------NKERAKELFARG-------MFWLITGPVAIAATAVLW 2925 MR+ LD++VY G+I+ FVL + VV R P I++VG + Q+ RE+ + + + WN ++ +L+ +T LV R V D + L F A +AP ++ + LF QIH GP++ HS+ FRM L +FG +M V +LGF +AF+ F +F+++ S L LF +MLG DF VF G LLV+ L ++ V LLNLL+AIL+T+H++V N D+E +S A ++ Y+ + +D LP+P N+ Q ++ + W + R+KE +A G +FW++ GPVA+ ++LW Sbjct: 1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLD--WPEATCAKIFIVGGVFQEGREMAR--NFGRYCEDQWNALDLLSLLFLTVGLVGR----VVDWKSQ--------------LGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQF-------------RDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLW 349
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 6.810e-16 Identity = 88/307 (28.66%), Postives = 142/307 (46.25%), Query Frame = 1 Query: 2134 FSNPWNNVETATLVAITTALVFRMWAFVCDGHGEHFCGEQSGEVNEVYLAQYFQAASAPFVLGKVLFLTQIHSSLGPLMHSLFRMFSDLARFGALMLVFILGFALAFYSLFGS------PSALLPDGGEI---SNFETYFSSLLTLFSSMLGTFDFAVFDGAPMAEAGVVLLVLFLCLMNVTLLNLLIAILTTTHSKVEGNADKEAVLSEALIITQYRRAMRSDSLPSPLNVPQELICHLF------------WWNKERAKELFARGM-----------------FWLITGPVAIAATAVLWAVSLP 2940 F + W ++T T+ I A +FR+ + F ++ A++F A SAP + ++L L+QI ++LGP+ ++RM S RF A + + +L FALAF+++F + P D F T+ S +T+F+ +GA AG+ LLV+++ M V LL LLIA+L+TTH KV NA+KE + A I Q R + P PLN+ + L+C + W+ + R++ + F G A+ +A+LW VS+P Sbjct: 452 FYDTWKFLDTPTIGCILVAFIFRVTTL-----DDKFF---------LFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHIEPQCTFDDDDAFPIRDAFGTFGDSFVTVFTDCRCNLP----EGAR--NAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIK-LVCGILLDAGTMLWRAGAWFRRGRSQAKMLKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVP 737 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig989.21168.1 >prot_F-serratus_M_contig989.21168.1 ID=prot_F-serratus_M_contig989.21168.1|Name=mRNA_F-serratus_M_contig989.21168.1|organism=Fucus serratus male|type=polypeptide|length=1268bp MPLSERKLVFTTEIETDSEDDNRSAISVAIKRGELSLLEAVLKWIPMGQVback to top mRNA from alignment at F-serratus_M_contig989:130375..187357- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig989.21168.1 ID=mRNA_F-serratus_M_contig989.21168.1|Name=mRNA_F-serratus_M_contig989.21168.1|organism=Fucus serratus male|type=mRNA|length=56983bp|location=Sequence derived from alignment at F-serratus_M_contig989:130375..187357- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig989:130375..187357- >mRNA_F-serratus_M_contig989.21168.1 ID=mRNA_F-serratus_M_contig989.21168.1|Name=mRNA_F-serratus_M_contig989.21168.1|organism=Fucus serratus male|type=CDS|length=7608bp|location=Sequence derived from alignment at F-serratus_M_contig989:130375..187357- (Fucus serratus male)back to top |