mRNA_F-serratus_M_contig981.21122.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Match: K9VYE6_9CYAN (Dioxygenase n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VYE6_9CYAN) HSP 1 Score: 297 bits (760), Expect = 1.240e-88 Identity = 183/505 (36.24%), Postives = 277/505 (54.85%), Query Frame = 1
Query: 247 LEYDIDSWSKGYEDADPEDQYLMEPSEGSIPEDIEGTWFRNGPAKFKIGNDLVKHPLDGDGMVMAISFSKEGAYFRNRFVRTKGFVKELEAGKQLYRGF--SNLPGGLLNNAFRIGRKNVANTNVHFWGGNLLALWERGLPYLLDAKSLDTLGETKLGGTIDEKRPTFTAHPRIDVTNQ----RLVGFGSHN--MQEVTLYEYDMNFKLVQSRLMKDVKGL--LHDFVVTDDYYVFYSGPVGLDPLKWVLGLETMGSAIKWEGQKRGATVYVVPRDPSKTTK-------TIDIPAGFCLHLANGFQDPNTGELILDVVESEFLSLDNKKGGGDEPVWENIDFSE----EVPRNRLQRYCMDLSSPEGALSSKTTLYNKFLDFPVVNPRVSCREHRYVWAACGRLESEEACPVQGVVKIDTQTGIIENWLPSRHEFLSECNFVPCKGAAADAPEDSGYLISVLVNGRDHRTEVLIFDAAKVSKGPVCRLPLKGFVGHTLHGSFASD 1698
L Y+ W+KGY+ E Y ++ EG IP ++ GT FRNGP + + + HP DGDGM+ AI+FS A++RNRFVRT+ FV+E AGK LYRG + PGG+LNNAF + +KN+ANT V +WGG LLALWE P+ LD +L+TLG L G +DE F AHPRID +++ LV F +T+YE D+N K+V+ V G +HDF +T +Y +F+ PV ++PL +VLGL I++ ++ + V+PR+ + K ++ +GF H AN F+ G++ +D + + V N DF E + +L R+ ++L E + L N+ +FP V+P R +RYV+ + A P+Q ++K D +T + W + F+SE FVP A+A ED G++++V+ + HR++V+I D +++G V RL LK V + LHGS+A +
Sbjct: 17 LSYNAQGWAKGYQSQKDEYDYWIDDVEGQIPVELSGTLFRNGPGLLDVNGEKIHHPFDGDGMISAIAFSDGRAHYRNRFVRTQAFVEEQAAGKILYRGVFGTQKPGGVLNNAFDLRKKNIANTQVIYWGGKLLALWEAAEPHRLDPYTLETLGLDYLDGVLDEG-DAFAAHPRIDPSSKDGTPHLVNFSIKPGLSSTITIYELDINGKVVEQHA-HSVPGFAFIHDFAITPNYCIFFQNPVSINPLPYVLGLRGAAECIEFHPEQ-STKIIVIPRNNTVLPKGGKSGVQMLETKSGFVFHHANAFEQD--GQIYIDSICYQSFP----------EVEPNSDFREVKFDAISPGQLWRFTVNL---ENETVERQQLENRCCEFPFVHPSHMGRPYRYVFMGAAHNNTGNA-PLQAILKADLETEERQLWSAAPEGFVSEPVFVPRADASA---EDDGWVLTVVYDSSRHRSDVVILDGRDLNQGAVARLHLKHHVPYGLHGSWAQE 499
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Match: K9F0W9_9CYAN (Dioxygenase n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9F0W9_9CYAN) HSP 1 Score: 296 bits (759), Expect = 1.270e-88 Identity = 190/507 (37.48%), Postives = 276/507 (54.44%), Query Frame = 1
Query: 223 TSSTSGSTLEYDIDSWSKGYEDADPEDQYLMEPSEGSIPEDIEGTWFRNGPAKFKIGNDLVKHPLDGDGMVMAISFSKEGAYFRNRFVRTKGFVKELEAGKQLYRGF--SNLPGGLLNNAFRIGRKNVANTNVHFWGGNLLALWERGLPYLLDAKSLDTLGETKLGGTIDEKRPTFTAHPRIDVTNQR------LVGFGSHN--MQEVTLYEYDMNFKLVQSRLMKDVKGL--LHDFVVTDDYYVFYSGPVGLDPLKWVLGLETMGSAIKWEGQKRGATVYVVPRDPSKTTKTIDIPAGFCLHLANGFQDPNTGELILD-VVESEFLSLDNKKGGGDEPVWENIDFSEEVPRNRLQRYCMDLSSPEGALSSKTTLYNKFLDFPVVNPRVSCREHRYVWAACGRLESEEACPVQGVVKIDTQTGIIENWLPSRHEFLSECNFVPCKGAAADAPEDSGYLISVLVNGRDHRTEVLIFDAAKVSKGPVCRLPLKGFVGHTLHGSFASDLV 1704
T S+ ++ +D+D W GY E Y +E +G+IP ++EGT FRNGP + V HP DGDGM+ AIS ++ AYFRNRFVRT+G+VKE AGK LYRG + PGG + NAF + KN+ANTNV +WG LLALWE P+ L+ ++LDTLG L G + + F+AHPRID + R LV FG +TLYE+D +LV + +++ G LHDF +T +Y +F+ PV +P+ ++ G++ I++ +K+ ++PR+ + +T+D+ F H AN F+ G+L LD V EF L KG + + DFS +P +L R+ +DL++ S L + +FP +NP R +RY++ A P+Q V+K D TG E W + F E FVP + A ED G+L+S N +E+ I DA V++GPV L L V + LHG+F + V
Sbjct: 3 TLSSPSASTSFDMDDWRSGYRSQPNEYAYAIEDIDGTIPAELEGTLFRNGPGLLDVNGYPVHHPFDGDGMITAISIAQGKAYFRNRFVRTEGYVKERAAGKPLYRGVFGTQKPGGPMANAFDLRLKNIANTNVIYWGEKLLALWEAAEPHRLNPETLDTLGLDDLDGVL-KPGEAFSAHPRIDPSCDRTNNQPCLVNFGVKTGLSSTITLYEFDPKGRLVHTH-RRNIPGFAFLHDFAITPNYCIFFQNPVSFNPIPYLAGIKGAAECIQFN-EKQPTRALIIPRNGTSPIQTVDLQPCFVFHHANAFEAD--GKLYLDSVCYQEFPDL---KGAEN---YLEADFSR-IPEGQLWRFELDLTT---GTSQAECLIERGCEFPDLNPNNVGRPYRYLYIGVAHRPQGNA-PLQAVLKRDLATGKEEIWSFAPRGFAGEPIFVPRPNSKA---EDEGWLLSQFYNAERGCSELAILDAQHVTQGPVATLKLPHHVPYGLHGNFTQNFV 490
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Match: A0A7C9TTU7_9CYAN (Dioxygenase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TTU7_9CYAN) HSP 1 Score: 296 bits (757), Expect = 3.700e-88 Identity = 188/513 (36.65%), Postives = 276/513 (53.80%), Query Frame = 1
Query: 235 SGSTLEYDIDSWSKGYEDADPEDQYLMEPSEGSIPEDIEGTWFRNGPAKFKIGNDLVKHPLDGDGMVMAISFSKEGAYFRNRFVRTKGFVKELEAGKQLYRGF--SNLPGGLLNNAFRIGRKNVANTNVHFWGGNLLALWERGLPYLLDAKSLDTLGETKLGGTIDEKRPTFTAHPRIDVTNQR------LVGFGSHNMQEVTL--YEYDMNFKLVQSRLMKDVKGL--LHDFVVTDDYYVFYSGPVGLDPLKWVLGLETMGSAIKWEGQKRGATVYVVPRDPSKT--------TKTIDIPAGFCLHLANGFQDPNTGELILD-VVESEFLSLDNKKGGGDEPVWENIDFSE----EVPRNRLQRYCMDLSSPEGALSSKTTLYNKFLDFPVVNPRVSCREHRYVWAACGRLESEEACPVQGVVKIDTQTGIIENWLPSRHEFLSECNFVPCKGAAADAPEDSGYLISVLVNGRDHRTEVLIFDAAKVSKGPVCRLPLKGFVGHTLHGSFASD 1698
S ++L Y + W KGYE E Y ++ EG IP+++EGT FRNGP I ++HP DGDGM+ ++FSK AYFRNRFVRT GFV+E +AGK LYRG + PGG L NAF + KN+ANTN+ +WGG LLALWE G PY LD SL+TLG +L G + E TF AHPRID + LV F + T+ YE++ N +++ R + G LHD ++ +Y +F+ PV L+PL ++LG G + + + + + + P+ K ID F H AN +++ + E+ +D V F S+ EP N+DF E VP +L R+ ++ + E +S L + +FP ++P R +RY++ + + A P+Q V+KID +TG + W + F E FVP + ED G+++ ++ + HR++V I DA +S GP+ RL LK + + LHGSF D
Sbjct: 7 SSTSLSYSREDWQKGYESQRNELDYWIDDVEGEIPQELEGTLFRNGPGLLDINGQPIQHPFDGDGMISQVAFSKGRAYFRNRFVRTTGFVEEQKAGKILYRGVFGTQKPGGWLANAFDLTHKNIANTNIIYWGGKLLALWEGGKPYQLDPYSLETLGLDELEGILQEGN-TFAAHPRIDPSCHMDGGEPCLVNFSVKPGRYTTIEIYEFNSNGDMLR-RQAHSIPGFAFLHDMAISPNYCIFFQNPVRLNPLPFLLGFRAAGQCLAYNPNETTKILLIPRQTPAADRPGSGDGKVKIIDTEPCFVFHHANAWEEGD--EIFIDSVCYDSFPSV--------EP---NVDFREVNFDTVPAGQLWRFQVNPKTQE---TSHRVLEGRCCEFPTLHPDRVGRSYRYLYIGAAQSATGNA-PLQAVLKIDLETGDRQIWSAAPRGFTGEPLFVPRPNGTS---EDDGWIMLLIYDAAYHRSDVAILDARDLSLGPIARLHLKHHIPYALHGSFTPD 497
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Match: D8G906_9CYAN (Dioxygenase n=1 Tax=Kamptonema sp. PCC 6506 TaxID=272129 RepID=D8G906_9CYAN) HSP 1 Score: 295 bits (755), Expect = 3.900e-88 Identity = 183/493 (37.12%), Postives = 273/493 (55.38%), Query Frame = 1
Query: 247 LEYDIDSWSKGYEDADPEDQYLMEPSEGSIPEDIEGTWFRNGPAKFKIGNDLVKHPLDGDGMVMAISFSKEGAYFRNRFVRTKGFVKELEAGKQLYRGF--SNLPGGLLNNAFRIGRKNVANTNVHFWGGNLLALWERGLPYLLDAKSLDTLGETKLGGTIDEKRPTFTAHPRIDVTN---QRLVGFGSHN--MQEVTLYEYDMNFKLVQSRLMKDVKGL--LHDFVVTDDYYVFYSGPVGLDPLKWVLGLETMGSAIKWEGQKRGATVYVVPRDPSK-TTKTIDIPAGFCLHLANGFQDPNTGELILDVVESEFLSLDNKKGGGDEPVWENIDFSEEVPRNRLQRYCMDLSSPEGALSSKTTLYNKFLDFPVVNPRVSCREHRYVWAACGRLESEEACPVQGVVKIDTQTGIIENWLPSRHEFLSECNFVPCKGAAADAPEDSGYLISVLVNGRDHRTEVLIFDAAKVSKGPVCRLPLKGFVGHTLHGSFAS 1695
+ YD W +GYE E Y ++ EG IP D++GT+FRNGP I + HP DGDGMV AI+F+ A+F N+FVRT+G++ E EAGK LYRG + PGGL N F + KN+ANTN+ +WGG LLALWE PY LD +L+TLG L G + P F+AHPRI+ +RLV F +T+YE D + KL+ R + G LHD +T +Y +F+ PV +PL + LGL+ IK++ KR V ++PR+P++ K ++ F H AN +++ GE+ +D V E S + + G D + ++F + +P L R+ ++L + + +FPV++P + +RY++ ES A P+Q ++KID + W + F+ E FVP + ED G+L+ ++ + +HR++V+I DA ++KGPV RL LK V + LHGSF S
Sbjct: 10 VSYDRKDWQRGYESQTQEYNYWIDDVEGEIPSDLQGTFFRNGPGLLDINGQKIHHPFDGDGMVCAIAFANGRAHFCNKFVRTEGYLAEQEAGKILYRGVFGTQKPGGLATNIFDLKIKNIANTNIIYWGGKLLALWEAAAPYRLDPYTLETLGLEYLDGILKPDEP-FSAHPRIESRGGKGKRLVNFSVKPGLSSTITIYELDADGKLLH-RHSHVIPGFAFLHDMAITPNYCIFFQNPVAFNPLPFALGLKGAAECIKFD-PKRRTQVILIPRNPNQGEIKFLEAETCFAFHHANAWEE--AGEIFVDSVCYE--SFPDVEPGKD---FREVNF-DSIPAGELWRFRLNLQEET---VQHEVIERRCCEFPVLHPDRVGQSYRYLYIGGAEAESGNA-PLQVILKIDLTKNERQIWSAAPRGFVGEPVFVPRNSFES---EDDGWLLILMYDAANHRSDVVILDALDITKGPVARLHLKHHVPYGLHGSFTS 484
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Match: A0A8J7F8L9_9CYAN (Dioxygenase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F8L9_9CYAN) HSP 1 Score: 296 bits (757), Expect = 4.140e-88 Identity = 178/508 (35.04%), Postives = 278/508 (54.72%), Query Frame = 1
Query: 253 YDIDSWSKGYEDADPEDQYLMEPSEGSIPEDIEGTWFRNGPAKFKIGNDLVKHPLDGDGMVMAISFSKEGAYFRNRFVRTKGFVKELEAGKQLYRGF--SNLPGGLLNNAFRIGRKNVANTNVHFWGGNLLALWERGLPYLLDAKSLDTLGETKLGGTIDEKRPTFTAHPRIDVTNQR------LVGFGSHN--MQEVTLYEYDMNFKLVQSRLMKDVKGL--LHDFVVTDDYYVFYSGPVGLDPLKWVLGLETMGSAIKWEGQKRGATVYVVPRDPS-------KTTKTIDIPAGFCLHLANGFQDPNTGELILDVVESEFLSLDNKKGGGDEPVWENIDFSEEVPRNRLQRYCMDLSSPEGALSSKTTLYNKFLDFPVVNPRVSCREHRYVWAACGRLESEEACPVQGVVKIDTQTGIIENWLPSRHEFLSECNFVP------CKGAAADAPEDSGYLISVLVNGRDHRTEVLIFDAAKVSKGPVCRLPLKGFVGHTLHGSFASDL 1701
Y ++W GY+ E Y ++ EG IP ++ GT F+NGP F I + HP DGDGM+ I+F+ A+FRNRFVRT+G+++E +AGK LYRG + PGG L NAF KN+ANTNV +WGG LLALWE P+ LD ++L+TLG+ + G + E F AHPR D ++ LV F +T++E D K+V+ V G +HDFV+T +Y + + PV +PL + LG+ G IK++ + V V+PR P+ + ++ +GF H AN F+ + E+++D + E +L + G D + DF P +L R+ ++L + + + + ++ +FP V+P R+HRY++ G S A P+Q K+D QTG + W + H F+SE NFVP A + ED G+++ ++ + HR++V+I DA ++K P+ RL LK + + LHG+F +++
Sbjct: 17 YSRENWQGGYQSLTEEFDYWIDDIEGEIPPELNGTLFKNGPGLFDINGQNIHHPFDGDGMISKITFTNGRAHFRNRFVRTEGYIEEQKAGKILYRGVFGTQKPGGWLANAFDFNLKNIANTNVIYWGGKLLALWEAAEPHKLDPQTLETLGKEQFDGVLSEDE-AFAAHPRFDPHCEQNNGEPCLVNFSIKPGLSTTITIFELDNTGKIVRKNAYS-VPGFAFIHDFVITQNYCILFQNPVAFNPLPFALGMRGAGECIKFQ-PNQPTKVIVIPRKPNIAKEGNKNGMQILEAQSGFVFHHANAFEKDS--EIVIDSICYE--TLPEVEAGND---FRETDFDALKP-GQLWRFYLNLENNQ---VRRELIESRCCEFPCVHPEKVGRDHRYLYMGAGHANSGNA-PLQAWEKVDLQTGEKQLWSAAPHGFVSEPNFVPRDMPKASSFANRNGDEDDGWVLGLVYDSTHHRSDVVILDAKDLNKEPIARLHLKHHIPYGLHGNFVNEV 509 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig981.21122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig981.21122.1 >prot_F-serratus_M_contig981.21122.1 ID=prot_F-serratus_M_contig981.21122.1|Name=mRNA_F-serratus_M_contig981.21122.1|organism=Fucus serratus male|type=polypeptide|length=599bp MITRLIIIMGTAGLVDSFSVGVSPCRRSSFIGNHGLILADRLLLDGLHPSback to top mRNA from alignment at F-serratus_M_contig981:133355..171418- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig981.21122.1 ID=mRNA_F-serratus_M_contig981.21122.1|Name=mRNA_F-serratus_M_contig981.21122.1|organism=Fucus serratus male|type=mRNA|length=38064bp|location=Sequence derived from alignment at F-serratus_M_contig981:133355..171418- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig981:133355..171418- >mRNA_F-serratus_M_contig981.21122.1 ID=mRNA_F-serratus_M_contig981.21122.1|Name=mRNA_F-serratus_M_contig981.21122.1|organism=Fucus serratus male|type=CDS|length=3594bp|location=Sequence derived from alignment at F-serratus_M_contig981:133355..171418- (Fucus serratus male)back to top |