mRNA_F-serratus_M_contig98.21086.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig98.21086.1
Unique NamemRNA_F-serratus_M_contig98.21086.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:93862..94769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size891
Cds size891
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932760.4132535-CDS-F-serratus_M_contig98:93861..939171622932760.4132535-CDS-F-serratus_M_contig98:93861..93917Fucus serratus maleCDSF-serratus_M_contig98 93862..93917 -
1690964460.7556565-CDS-F-serratus_M_contig98:93861..939171690964460.7556565-CDS-F-serratus_M_contig98:93861..93917Fucus serratus maleCDSF-serratus_M_contig98 93862..93917 -
1622932760.4353967-CDS-F-serratus_M_contig98:93934..947691622932760.4353967-CDS-F-serratus_M_contig98:93934..94769Fucus serratus maleCDSF-serratus_M_contig98 93935..94769 -
1690964460.7656102-CDS-F-serratus_M_contig98:93934..947691690964460.7656102-CDS-F-serratus_M_contig98:93934..94769Fucus serratus maleCDSF-serratus_M_contig98 93935..94769 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21086.1prot_F-serratus_M_contig98.21086.1Fucus serratus malepolypeptideF-serratus_M_contig98 93862..94769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig98.21086.1

>prot_F-serratus_M_contig98.21086.1 ID=prot_F-serratus_M_contig98.21086.1|Name=mRNA_F-serratus_M_contig98.21086.1|organism=Fucus serratus male|type=polypeptide|length=297bp
ENEEEGEGDHQDSSEPTNENLTSGEGADDEQGLDEHGSTATEKVGNEPSS
SAEVEEQSAAQSKEVSLPASLSSAAAADVEILAEEKIDFEVEKKGEDGEP
REVNKAVSTAGQQAVKGGDNQEAGGDGDQGQAWGNQAEVVDVPAEASDQV
MEASTPSASSGNPVSSTHLSTTEGAMVESVEFSPAVTSSAAEPGVPEGGG
GGMEVAGAAGEDSGEREEPARGDVGKEVAQKDQSVENWAWGNEGEGIAEG
PGSEGEAPAVAPTVVTAGESAGGASATSGSNGPRRSVGDRIGKRTGG
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mRNA from alignment at F-serratus_M_contig98:93862..94769-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig98.21086.1 ID=mRNA_F-serratus_M_contig98.21086.1|Name=mRNA_F-serratus_M_contig98.21086.1|organism=Fucus serratus male|type=mRNA|length=908bp|location=Sequence derived from alignment at F-serratus_M_contig98:93862..94769- (Fucus serratus male)
GAAAACGAAGAGGAGGGAGAGGGAGACCACCAAGACTCTTCGGAACCCAC
CAACGAGAACCTCACTTCAGGTGAAGGCGCCGACGATGAGCAGGGGCTCG
ACGAGCATGGGAGCACTGCTACTGAGAAGGTTGGAAACGAGCCCTCGAGC
TCGGCAGAAGTTGAGGAGCAATCGGCAGCGCAGAGCAAGGAAGTTTCTCT
CCCTGCATCCCTGTCCTCTGCAGCCGCCGCCGACGTCGAGATCCTCGCCG
AAGAGAAGATCGATTTTGAAGTGGAGAAAAAGGGTGAAGATGGGGAACCG
AGGGAGGTGAATAAGGCGGTTTCAACAGCAGGGCAGCAAGCTGTCAAAGG
AGGTGATAATCAAGAGGCGGGAGGAGACGGAGATCAAGGGCAGGCTTGGG
GGAACCAGGCGGAAGTGGTGGATGTGCCGGCCGAAGCCAGCGATCAAGTC
ATGGAGGCTTCTACACCTTCTGCTTCGTCGGGCAACCCGGTTTCGAGCAC
GCATCTAAGCACTACGGAGGGCGCAATGGTTGAGAGCGTCGAATTTTCAC
CTGCTGTCACAAGCAGCGCGGCCGAACCCGGGGTCCCAGAGGGAGGAGGA
GGGGGCATGGAGGTGGCGGGTGCGGCTGGTGAAGATAGTGGAGAACGCGA
AGAACCTGCAAGAGGGGATGTGGGTAAGGAGGTGGCACAGAAGGATCAAA
GCGTGGAGAACTGGGCGTGGGGGAACGAAGGGGAAGGAATTGCCGAGGGG
CCTGGAAGCGAGGGTGAAGCGCCAGCCGTTGCACCGACTGTAGTTACCGC
TGGCGAATCTGCAGGAGGCGCATCGGCGACTTCCGGCGGCCAGGTCGCGG
AGGAAGTAACGGGCCCCGTAGAAGCGTTGGCGACCGGATCGGGAAACGGA
CAGGAGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig98:93862..94769-

>mRNA_F-serratus_M_contig98.21086.1 ID=mRNA_F-serratus_M_contig98.21086.1|Name=mRNA_F-serratus_M_contig98.21086.1|organism=Fucus serratus male|type=CDS|length=1782bp|location=Sequence derived from alignment at F-serratus_M_contig98:93862..94769- (Fucus serratus male)
GAAAACGAAGAGGAGGGAGAGGGAGACCACCAAGACTCTTCGGAACCCAC
CAACGAGAACCTCACTTCAGGTGAAGGCGCCGACGATGAGCAGGGGCTCG
ACGAGCATGGGAGCACTGCTACTGAGAAGGTTGGAAACGAGCCCTCGAGC
TCGGCAGAAGTTGAGGAGCAATCGGCAGCGCAGAGCAAGGAAGTTTCTCT
CCCTGCATCCCTGTCCTCTGCAGCCGCCGCCGACGTCGAGATCCTCGCCG
AAGAGAAGATCGATTTTGAAGTGGAGAAAAAGGGTGAAGATGGGGAACCG
AGGGAGGTGAATAAGGCGGTTTCAACAGCAGGGCAGCAAGCTGTCAAAGG
AGGTGATAATCAAGAGGCGGGAGGAGACGGAGATCAAGGGCAGGCTTGGG
GGAACCAGGCGGAAGTGGTGGATGTGCCGGCCGAAGCCAGCGATCAAGTC
ATGGAGGCTTCTACACCTTCTGCTTCGTCGGGCAACCCGGTTTCGAGCAC
GCATCTAAGCACTACGGAGGGCGCAATGGTTGAGAGCGTCGAATTTTCAC
CTGCTGTCACAAGCAGCGCGGCCGAACCCGGGGTCCCAGAGGGAGGAGGA
GGGGGCATGGAGGTGGCGGGTGCGGCTGGTGAAGATAGTGGAGAACGCGA
AGAACCTGCAAGAGGGGATGTGGGTAAGGAGGTGGCACAGAAGGATCAAA
GCGTGGAGAACTGGGCGTGGGGGAACGAAGGGGAAGGAATTGCCGAGGGG
CCTGGAAGCGAGGGTGAAGCGCCAGCCGTTGCACCGACTGTAGTTACCGC
TGGCGAATCTGCAGGAGGCGCATCGGCGACTTCCGGAAAACGAAGAGGAG
GGAGAGGGAGACCACCAAGACTCTTCGGAACCCACCAACGAGAACCTCAC
TTCAGGTGAAGGCGCCGACGATGAGCAGGGGCTCGACGAGCATGGGAGCA
CTGCTACTGAGAAGGTTGGAAACGAGCCCTCGAGCTCGGCAGAAGTTGAG
GAGCAATCGGCAGCGCAGAGCAAGGAAGTTTCTCTCCCTGCATCCCTGTC
CTCTGCAGCCGCCGCCGACGTCGAGATCCTCGCCGAAGAGAAGATCGATT
TTGAAGTGGAGAAAAAGGGTGAAGATGGGGAACCGAGGGAGGTGAATAAG
GCGGTTTCAACAGCAGGGCAGCAAGCTGTCAAAGGAGGTGATAATCAAGA
GGCGGGAGGAGACGGAGATCAAGGGCAGGCTTGGGGGAACCAGGCGGAAG
TGGTGGATGTGCCGGCCGAAGCCAGCGATCAAGTCATGGAGGCTTCTACA
CCTTCTGCTTCGTCGGGCAACCCGGTTTCGAGCACGCATCTAAGCACTAC
GGAGGGCGCAATGGTTGAGAGCGTCGAATTTTCACCTGCTGTCACAAGCA
GCGCGGCCGAACCCGGGGTCCCAGAGGGAGGAGGAGGGGGCATGGAGGTG
GCGGGTGCGGCTGGTGAAGATAGTGGAGAACGCGAAGAACCTGCAAGAGG
GGATGTGGGTAAGGAGGTGGCACAGAAGGATCAAAGCGTGGAGAACTGGG
CGTGGGGGAACGAAGGGGAAGGAATTGCCGAGGGGCCTGGAAGCGAGGGT
GAAGCGCCAGCCGTTGCACCGACTGTAGTTACCGCTGGCGAATCTGCAGG
AGGCGCATCGGCGACTTCCGGAAGTAACGGGCCCCGTAGAAGCGTTGGCG
ACCGGATCGGGAAACGGACAGGAGGCGAAGTAACGGGCCCCGTAGAAGCG
TTGGCGACCGGATCGGGAAACGGACAGGAGGC
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