|
Homology
BLAST of mRNA_F-serratus_M_contig972.21049.1 vs. uniprot
Match: A0A7S4LNG7_OXYMA (Hypothetical protein n=2 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S4LNG7_OXYMA) HSP 1 Score: 158 bits (399), Expect = 2.370e-38 Identity = 120/365 (32.88%), Postives = 181/365 (49.59%), Query Frame = 3
Query: 336 GVTD--IHDCENLQYTSTIGIGTPSQELKVTLNTGSYDLWVASTECDSCGATHGYDSSASSTYMPNGEEFSVLYENGMGGTGFLSMDKLTVGGLSTT-VTFGEMTMAD---LLENCDEMDGMMGMG---LSNKDGQNAFEDMLDAGVVDVPVFSFFMGNIDENSPTGILTLGGVNQTHYEGCLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEATAFIDTATSLVVGPKADIGVIAGELGAFCVKFLETSASEIEEVDCVNDAEDVELILLDCDTEFDDISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDNT----WILGDSFLRAFYTAYNVHDRTVGLAPATN 1391
G TD I D +N QY + +GTP Q+ V +TGS +LWV + + Y+ SSTY NG EF ++Y +G +G S D +T+G + TF E+ L + DG+ GM +S + F ++D+ +DVPVF+F++GN N+P G L +GGV+ HY G +V +S E +W+V L VK+ S + TA +D+ TSL+ GP AD+ IA +LGA V E ++DCDT ++F GG ++TL S DL+ Q+S N C+ G+ G D+ WILGD F+R +Y ++ + +G+A A +
Sbjct: 47 GSTDVVISDYQNAQYYGDLTVGTPGQKETVIYDTGSSNLWVPN-KSPVLAFKKVYNHEKSSTYKANGTEFKIMYGSGPV-SGMFSQDTMTIGSVEVPEYTFAEVNDTSGLGLAYRAGKFDGICGMAWDAISVGGVKTPFHALVDSQKLDVPVFAFYLGN---NAP-GELVIGGVDSKHYTGDFSFVPLSSET------YWAVGLDGVKLDG-SAIGSTKTAIVDSGTSLLAGPSADVKAIASKLGAKSVLGKE--------------------YIVDCDTFKSSMTFSLGGQEYTLDSKDLVL---------QASGNQ-CILGLTGIDVPAPAGPLWILGDVFMRKYYVQFDWGQKRIGVATAAS 368
BLAST of mRNA_F-serratus_M_contig972.21049.1 vs. uniprot
Match: UPI0011414F20 (lysosomal aspartic protease-like n=1 Tax=Formica exsecta TaxID=72781 RepID=UPI0011414F20) HSP 1 Score: 158 bits (399), Expect = 2.370e-38 Identity = 121/361 (33.52%), Postives = 174/361 (48.20%), Query Frame = 3
Query: 348 IHDCENLQYTSTIGIGTPSQELKVTLNTGSYDLWVASTECDS----CGATHGYDSSASSTYMPNGEEFSVLYENGMGGTGFLSMDKLTVGGLSTTVTFGEMTMADLLENCD------EMDGMMGMGLS--NKDGQN-AFEDMLDAGVVDVPVFSFFMGNIDENSPTGILTLGGVNQTHYEGCLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEATAFIDTATSLVVGPKADIGVIAGELGAFCVKFLETSASEIEEVDC--VNDAEDVELILLDCDTEFDDISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDNTWILGDSFLRAFYTAYNVHDRTVGLAPA 1385
+ D ++ Y I IGTP Q V +TGS +LWV S +C S C + YDSS SSTY NGE F + Y G TGFLS D + V GL+ T A+ +E + DG++GMG ++DG F +M+ +V PVFSF++ D + G L LGG + HY G L +V V+++ G+W + V VG ++ G A DT TSL+VGP I VI ++G VDC +N V ++L + +++ DD+ +LQ +ED + C+ G D D WILGD FLR +Y+ Y++ + VG AP+
Sbjct: 57 LSDYLDVSYYGNISIGTPPQYFSVLFDTGSSNLWVPSQQCQSDNQACSSHRRYDSSKSSTYESNGEHFGIQYGTGSL-TGFLSTDVVNVAGLNVQ----HQTFAEAVEEPGSTFVYAKFDGILGMGYDTISEDGVTPVFNNMVQQNLVPEPVFSFYLNRDDSSDEVGELILGGTDPDHYVGELAYVPVTEK------GYWQFTMDSVTVGDNNVA-GSYQAIADTGTSLIVGPSDVIDVINQQIGT----------DNYGNVDCSTINQLPTVGIVL-------NGLTYNLTPDDY------ILQDVEDGVAT--------CMSGFEESDSD-LWILGDVFLRPYYSVYDLGNNQVGFAPS 373
BLAST of mRNA_F-serratus_M_contig972.21049.1 vs. uniprot
Match: A0A7S1Z4I8_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4I8_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.080e-38 Identity = 120/373 (32.17%), Postives = 185/373 (49.60%), Query Frame = 3
Query: 315 LGDDGKMGVTDIHDCENLQYTSTIGIGTPSQELKVTLNTGSYDLWVASTECDSCG------ATHGYDSSASSTYMPNGEEFSVLYENGMGGTGFLSMDKLTVGG-LSTT-VTFGEMTMADLLEN---CDEMDGMMGMGLSNKD--GQNAFEDML-DAGVVDVPVFSFFMGNIDENSPTGILTLGGVNQTHYEGCLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEATAFIDTATSLVVGPKADIGVIAGELGAFCVKFLETSASEIEEVDCVNDAEDVELILLDCDTEFD--DISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDN--TWILGDSFLRAFYTAYNVHDRTVGLA 1379
+ + GK IHD N QY ++ IGTP Q KV +TGS +LWV C CG YD S SS+Y NGEEF ++Y +G GF S + +TV +S T + F E+T A L + DG+MG+ S+ G+ F D+L + V+ P+FSF++G+ E G LT GGV++ YEG +E+VD+ + +W + + + G SM G+ TA +D+ TSL+ GPK ++ +A ++GA + + +DC+ D D++ G +T+ DL+ ++N CLF ++G D+ WILGD F+R +YT ++ + VG A
Sbjct: 97 INEGGKDETVAIHDFSNAQYYGSVSIGTPPQSFKVIFDTGSSNLWVPKEGCSHCGYKIFGLGKDKYDHSKSSSYTENGEEFKIVYGSGAV-NGFFSKETVTVSDDVSVTGMDFAEVTDAGGLGIGYVMGKFDGIMGLAFSSISIKGKPTFMDLLLEQNVLKEPIFSFYLGDNTE----GELTFGGVDEEKYEGEIEYVDL------ISSTYWEIDVDGISAGDYSM--GKTTAIVDSGTSLLTGPKKEVSKLALQVGAKPNMMGQYT--------------------MDCEKLGDVPDLTVTINGSVYTVSGRDLVM----------KAANT-CLFAIMGMDIPEGPQWILGDVFMRKYYTVFDYGNERVGFA 425
BLAST of mRNA_F-serratus_M_contig972.21049.1 vs. uniprot
Match: A0A673SZ28_SURSU (Renin n=7 Tax=Carnivora TaxID=33554 RepID=A0A673SZ28_SURSU) HSP 1 Score: 158 bits (400), Expect = 3.640e-38 Identity = 126/382 (32.98%), Postives = 193/382 (50.52%), Query Frame = 3
Query: 285 SVWEHRSRRKLGDDGKMGVTDIHDCENLQYTSTIGIGTPSQELKVTLNTGSYDLWVASTECD----SCGATHGYDSSASSTYMPNGEEFSVLYENGMGGTGFLSMDKLTVGGLSTTVTFGEMTMADLLE-NCDEMDGMMGMGLSNKDGQNA---FEDMLDAGVVDVPVFSFFMGNIDENSPT--GILTLGGVNQTHYEGCLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEAT-AFIDTATSLVVGPKADIGVIAGELGAFCVKFLETSASEIEEVDCVNDAEDVELILLDCDTEFDDISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDN----TWILGDSFLRAFYTAYNVHDRTVGLAPA 1385
S W ++R D+ V + + ++QY IGIGTP Q KV +TGS +LWV ST+C +C YDSS SS+YM NG F++ Y +G GFLS D++TVGG++ T TFGE+T L+ + DG++GMG + F+ +L GV+ VFS + +NS G + LGG + +Y+G +V VS+ G W + +K + V S +++ E A +DT S + GP + + ++ LGA E S ++ V+C +L+ DISF GG +TL SSD + L+D +++ C + G D+ W+LG SF+R FYT ++ + +G A A
Sbjct: 58 SEWTQFTKRFSFDNSTAPVV-LTNYLDIQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTKCSPLYTACEIHSLYDSSESSSYMENGTAFTIRYTSGRV-KGFLSQDEVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEDVFSVYYSRNSKNSHLLGGEVVLGGSDPQYYQGSFHYVSVSKT------GSWQIKMKGLSVRSATLVCEEGCMAVVDTGASYISGPTSSLRLLMETLGA-----KELSPNQYV-VNC-------KLV-----PTLPDISFHLGGRAYTLTSSDYV--LQD-----PYANDDLCTLALHGLDVSPPTGPVWVLGASFIRKFYTEFDRRNNRIGFALA 406
BLAST of mRNA_F-serratus_M_contig972.21049.1 vs. uniprot
Match: RENI1_MOUSE (Renin-1 n=11 Tax=Mus TaxID=10088 RepID=RENI1_MOUSE) HSP 1 Score: 158 bits (399), Expect = 4.420e-38 Identity = 118/356 (33.15%), Postives = 175/356 (49.16%), Query Frame = 3
Query: 363 NLQYTSTIGIGTPSQELKVTLNTGSYDLWVASTECD----SCGATHGYDSSASSTYMPNGEEFSVLYENGMGGTGFLSMDKLTVGGLSTTVTFGEMTMADLLE-NCDEMDGMMGMGLSNKDGQNA---FEDMLDAGVVDVPVFSFFMGNIDENSPTGILTLGGVNQTHYEGCLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEATAFI-DTATSLVVGPKADIGVIAGELGAFCVKFLETSASEIEEVDCVNDAEDVELILLDCDT--EFDDISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDN----TWILGDSFLRAFYTAYNVHDRTVGLAPA 1385
N QY IGIGTP Q KV +TGS +LWV ST+C +CG Y+SS SS+YM NG +F++ Y +G GFLS D +TVGG++ T TFGE+T L+ + DG++GMG + F+ +L GV+ VFS + N + G + LGG + HY+G +V +S+ W + +K V VGS ++L E A + DT +S + P + + +I LGA IEE +++C DISF GG +TL S+ D+ + + C + D+ W+LG +F+R FYT ++ H+ +G A A
Sbjct: 81 NTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRV-KGFLSQDSVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYY-NRGSHLLGGEVVLGGSDPQHYQGNFHYVSISKTDS------WQITMKGVSVGSSTLLCEEGCAVVVDTGSSFISAPTSSLKLIMQALGA--------KEKRIEEY------------VVNCSQVPTLPDISFDLGGRAYTLSST-------DYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 444.1 |
Seed ortholog evalue | 1.1e-121 |
Seed eggNOG ortholog | 2880.D7FJG5 |
KEGG ko | ko:K01378,ko:K01379,ko:K06002,ko:K08245 |
KEGG Pathway | ko04071,ko04140,ko04142,ko04210,ko04915,ko04974,ko05152,map04071,map04140,map04142,map04210,map04915,map04974,map05152 |
Hectar predicted targeting category | signal anchor |
EggNOG free text desc. | aspartic-type endopeptidase activity |
EggNOG OGs | KOG1339@1,KOG1339@2759 |
Ec32 ortholog description | expressed unknown protein |
Ec32 ortholog | Ec-00_009120.1 |
EC | 3.4.23.1,3.4.23.4,3.4.23.40,3.4.23.5 |
COG Functional cat. | M |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko01002,ko04147 |
Exons | 8 |
Model size | 3455 |
Cds size | 1920 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932754.1627576-UTR-F-serratus_M_contig972:18946..20380 | 1622932754.1627576-UTR-F-serratus_M_contig972:18946..20380 | Fucus serratus male | UTR | F-serratus_M_contig972 18947..20380 - |
1690964457.5322986-UTR-F-serratus_M_contig972:18946..20380 | 1690964457.5322986-UTR-F-serratus_M_contig972:18946..20380 | Fucus serratus male | UTR | F-serratus_M_contig972 18947..20380 - |
1622932754.3508868-UTR-F-serratus_M_contig972:27112..27213 | 1622932754.3508868-UTR-F-serratus_M_contig972:27112..27213 | Fucus serratus male | UTR | F-serratus_M_contig972 27113..27213 - |
1690964457.6440127-UTR-F-serratus_M_contig972:27112..27213 | 1690964457.6440127-UTR-F-serratus_M_contig972:27112..27213 | Fucus serratus male | UTR | F-serratus_M_contig972 27113..27213 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932754.1763809-CDS-F-serratus_M_contig972:20380..21095 | 1622932754.1763809-CDS-F-serratus_M_contig972:20380..21095 | Fucus serratus male | CDS | F-serratus_M_contig972 20381..21095 - |
1690964457.5480273-CDS-F-serratus_M_contig972:20380..21095 | 1690964457.5480273-CDS-F-serratus_M_contig972:20380..21095 | Fucus serratus male | CDS | F-serratus_M_contig972 20381..21095 - |
1622932754.1962013-CDS-F-serratus_M_contig972:21456..21563 | 1622932754.1962013-CDS-F-serratus_M_contig972:21456..21563 | Fucus serratus male | CDS | F-serratus_M_contig972 21457..21563 - |
1690964457.5604131-CDS-F-serratus_M_contig972:21456..21563 | 1690964457.5604131-CDS-F-serratus_M_contig972:21456..21563 | Fucus serratus male | CDS | F-serratus_M_contig972 21457..21563 - |
1622932754.2442424-CDS-F-serratus_M_contig972:22038..22146 | 1622932754.2442424-CDS-F-serratus_M_contig972:22038..22146 | Fucus serratus male | CDS | F-serratus_M_contig972 22039..22146 - |
1690964457.5789554-CDS-F-serratus_M_contig972:22038..22146 | 1690964457.5789554-CDS-F-serratus_M_contig972:22038..22146 | Fucus serratus male | CDS | F-serratus_M_contig972 22039..22146 - |
1622932754.2597845-CDS-F-serratus_M_contig972:23006..23248 | 1622932754.2597845-CDS-F-serratus_M_contig972:23006..23248 | Fucus serratus male | CDS | F-serratus_M_contig972 23007..23248 - |
1690964457.5901763-CDS-F-serratus_M_contig972:23006..23248 | 1690964457.5901763-CDS-F-serratus_M_contig972:23006..23248 | Fucus serratus male | CDS | F-serratus_M_contig972 23007..23248 - |
1622932754.2756076-CDS-F-serratus_M_contig972:23689..23798 | 1622932754.2756076-CDS-F-serratus_M_contig972:23689..23798 | Fucus serratus male | CDS | F-serratus_M_contig972 23690..23798 - |
1690964457.603073-CDS-F-serratus_M_contig972:23689..23798 | 1690964457.603073-CDS-F-serratus_M_contig972:23689..23798 | Fucus serratus male | CDS | F-serratus_M_contig972 23690..23798 - |
1622932754.2918143-CDS-F-serratus_M_contig972:24184..24351 | 1622932754.2918143-CDS-F-serratus_M_contig972:24184..24351 | Fucus serratus male | CDS | F-serratus_M_contig972 24185..24351 - |
1690964457.6153703-CDS-F-serratus_M_contig972:24184..24351 | 1690964457.6153703-CDS-F-serratus_M_contig972:24184..24351 | Fucus serratus male | CDS | F-serratus_M_contig972 24185..24351 - |
1622932754.3120189-CDS-F-serratus_M_contig972:24851..24975 | 1622932754.3120189-CDS-F-serratus_M_contig972:24851..24975 | Fucus serratus male | CDS | F-serratus_M_contig972 24852..24975 - |
1690964457.6244361-CDS-F-serratus_M_contig972:24851..24975 | 1690964457.6244361-CDS-F-serratus_M_contig972:24851..24975 | Fucus serratus male | CDS | F-serratus_M_contig972 24852..24975 - |
1622932754.3367531-CDS-F-serratus_M_contig972:26764..27112 | 1622932754.3367531-CDS-F-serratus_M_contig972:26764..27112 | Fucus serratus male | CDS | F-serratus_M_contig972 26765..27112 - |
1690964457.633773-CDS-F-serratus_M_contig972:26764..27112 | 1690964457.633773-CDS-F-serratus_M_contig972:26764..27112 | Fucus serratus male | CDS | F-serratus_M_contig972 26765..27112 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig972.21049.1 >prot_F-serratus_M_contig972.21049.1 ID=prot_F-serratus_M_contig972.21049.1|Name=mRNA_F-serratus_M_contig972.21049.1|organism=Fucus serratus male|type=polypeptide|length=640bp
MVQARDGCHCASIAALKRRIISPAASISLAVVLIMLFASNEAKKAPIASS ITRRAQYPFPTSVWEHRSRRKLGDDGKMGVTDIHDCENLQYTSTIGIGTP SQELKVTLNTGSYDLWVASTECDSCGATHGYDSSASSTYMPNGEEFSVLY ENGMGGTGFLSMDKLTVGGLSTTVTFGEMTMADLLENCDEMDGMMGMGLS NKDGQNAFEDMLDAGVVDVPVFSFFMGNIDENSPTGILTLGGVNQTHYEG CLEWVDVSQEQKDVPDGFWSVVLKDVKVGSESMLRGEATAFIDTATSLVV GPKADIGVIAGELGAFCVKFLETSASEIEEVDCVNDAEDVELILLDCDTE FDDISFFFGGDDFTLKSSDLLQPLEDFETSKQSSSNPWCLFGMLGEDMDN TWILGDSFLRAFYTAYNVHDRTVGLAPATNHRKGDECDADANLGASHPSL TSADDTEGSNAADDDGGGEGSSKTAPAAHKDSGEDDDEKHPPGLIAVAVP AVVGTIVLFSAVVGLVLLGRHVWAGKKYRHLGGDMVEMADTAVRVPMPED DFLQASGPRGDSGVGGGKRVVLKGIYEDGDEDEVDVDLGGKGRGGLGGST KANVFGRLLSSPDEEGFAAFDDDENEGLGAQSGGRQSDI* back to topmRNA from alignment at F-serratus_M_contig972:18947..27213- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig972.21049.1 ID=mRNA_F-serratus_M_contig972.21049.1|Name=mRNA_F-serratus_M_contig972.21049.1|organism=Fucus serratus male|type=mRNA|length=8267bp|location=Sequence derived from alignment at F-serratus_M_contig972:18947..27213- (Fucus serratus male) GTTAGTCGGAGGTGGTGTAGGTACTACCAAAAGGACACACCCCAGCAGCT
TGTCCGTCACATCATCGAGCGACTCTTCTCACTGACGTTCAACTTGTTTT
AATGGTGCAGGCACGAGATGGTTGCCATTGCGCGTCCATTGCGGCACTCA
AACGCCGGATAATTTCCCCCGCAGCTTCTATTTCACTGGCAGTAGTCCTG
ATCATGCTTTTCGCAAGCAATGAGGCCAAAAAGGCCCCAATCGCATCAAG
CATTACCAGGAGAGCTCAATACCCTTTTCCCACGTCAGTTTGGGAGCATC
GATCACGCAGAAAGCTTGGTGATGACGGTAAAATGGGAGTCACTGATATT
CACGACTGCGAGAACCTCCAGTACACCTCCACGATCGGCATCGGCACCCC
ATCCCAGGAGCTGAAGGTCACGCTGAACACCGGAAGCTACGACTTGTGGG
TAAGACCTACGACTACCCTAGCCTGCCTGTAGCAGCGACGCTAGAGTAGC
GATAGCGTGGCTTGTTAATCACAAGGAATGACAAACAGGCCTTCGGTTGC
CCTGCTTCTTCGTCGAGACCGCTGAACGAATAGAGCAGCACCCACACGCA
AGATCACAGATTACTAGTCTATAGACGAAAGCTGGCTCGTACTTGTTATA
AACCCATTTGTAGCCGAAAGAAAAATCTGAACCCCAGACCTTCTGAGCAA
GTTGCTCTATCCCGCTTGACGATCAGATCTCCTTGTAATATATACGAAGT
ACCTGGTACTGCTGTCGTCCGGTTCCCAGTACGGTACACGTGTTACGGTA
AATGCTGTACAGGACGCATTAAGTATTTTAGTACAGGAGGTCGCTTACCC
ACCGACACAAGACTCAACTTTGGTGCTCAGGGCCACGACGGTGCATGGTC
CATGTGCGGCACCGGTCGTTTTTCTGCAAACCCCACTCAACCTACCATAA
CACACCGTATTGATACTAATATTAATAGTTGCCTACAGTACTACAAAAGT
TGTTCTAAAGAGTTGTGTTCTTGTTTTTCCTTACCTCGTACACTCACTCT
GTTCAAACCCCGACTAGCTCTAGCTAGGGCTCTGGTCTAATAACTTAGAA
CACCACCCGACTAAACGCCATGTGTATTCTAATCACTCAAAAGGTTTAGG
TGGGAACATAGACTATACTGCTGTAGGGACGAAAGCTCTTAGTCGTACTA
AAAGGGTTCATCATCCCCCATGTAGGAACAGTATTATAATATCGGGAAGA
AGCCCACCGTTTATAACGTTGTTAATCACTATTTAGGGACATCAAAACAA
AACAAGGAACGATATCATGCTCAGAAGGTCTAGGCGCGTTCTAGTTTTTC
TATAAAAATCACTCTATTAGTAGGCTCTAGTTATACAGTATTTTTGGACT
AAGAGTTCCAGACTACGGTGCAGATTTTCCCCCCTAACCGGGGGATGGTC
AAAGGGTCTAGATGCTGGTCTGATTTTCTATAACTATGGTATGATATAGA
GAAAGAGAAAGTTAAAGATGGTGTTTGGTGTTACATTTCGATGAAGGAAG
TCTACAAGTCATAGTCTAGGTGTGAAGGACTTCAGATTTACAACATGCTC
TTCGACACTATTATAATATACATTTATGAATGCAGGTGTTTGAAGGTTTA
GTCACAAATAAGGTCAAAATGATAAATCGGGGATAAATGTCTTGTTATAC
TATACAACTTCCATCAAGGGATCAGTACTACAATATTAACATGATCATAG
AAGAGATAACGTTCATTATTGTTATTACGATAAAATTACCTATAACTCAT
GGATATGGGAGGCCTCAAATTACAACGGGCGATAGGGACTGATCTACAGT
AATGGAAGCAGGCGTAAAGTACTTGTGGTATCAAAAATGGAAATGCAGGT
TATGTAAGAGCAGGAGGAATAGTCTAGTGGTAAGGTATATAATATGTATG
TAACAATGAAAGCAACAGGTTTGGGTCAATGATTTGAAGAATGGCAAAGT
TTTTGTTTAACAATCGATATTCCCAACTACAGGTATAGAACCTATAATAG
TTGGTAAACCTTTTTTGACTCAATTGCCCCGGACGCTGTGGATGTTCGCA
TCATAAGGTAAGGTAAAGGTTCAGATGCGCTTAGATTTTCCTTACAACTA
CGAGTATGGTAATACGAAATATCGTACTATACGGAGCTATTTGATGATGC
CCTTTCTTCCCCTTGTGCGTGATGCGCTTGTGCTCCAGGTGGCGAGCACC
GAGTGCGACTCCTGCGGAGCAACTCATGGGTACGACTCTTCTGCGTCGAG
CACCTACATGCCCAACGGAGAGGAGTTCAGCGTGTTGTACGAAAACGGCA
TGGGGGGCACGGGTACGACGTTTCTATTTTGTTTCTGTTTTTTCAATACG
GTGTGCAGCGAGTGAGGGTAGTCATAGTGGCGTTTTTGCGTCACCGTGTG
CCCCACCCGAGAGCATAGAGTTGTTGCTGTTGTTCATTCCCACGTTCAGC
GTTTTGTCCTCGTCACTAGGAACTATTGTTCCTGTACACAAGAGCCAGCG
ATAGACCTATCAAATGTCATTTTCAGCTCCTGGTCAGAACGAGGTTCGAA
GGTCAACGGATCACATCTTTTGTGACAACCCGCTACTCAAACCAACAGGG
ATCCAAATCGCAACAAGATATTGTTATTAATAGGTTCAACACCCGGAAAC
ATTGGAAACGTATTCGCATCAAGACATATCTTTTACACCTAGCGCGTTAT
TTTTATTTTGATGTATTTTTGCTCGTCGAGACCTCGGGGCTTCTCTCCTT
TGGAAGTAAGTCTCCTCCGCACAACGACGTGGTGTCCACACGTGCACATG
ACGTCATCACAGGATTCCTGTCCATGGACAAGCTGACTGTGGGAGGGCTC
TCAACGACCGTGACCTTCGGAGAGATGACCATGGCTGACCTGCTGGAGAA
CTGCGACGAAATGGACGGGATGATGGGCATGGGCCTCTCGAACAAAGACG
GCCAGAACGCCTTCGAAGACATGCTCGATGTGAGCTAATTCTCAGCACTG
AATGCACCGCTTGCACGCATTAGTCCCGCCGCCATAAATAGTTTGTTTTT
TTATGTAGTCTCATGAAGTGCGTTTCAAGCGCTCGAACATCATACGCAAG
CTTGAGAGCAAACTCGCCTGTTTTTCCCATCCAAAAGCGCTACTGATACG
ACAGCATACTTCGGCGTATACGCTCTCCTAGTATTCGCCTGTTGCCTCCC
GATCGAGAAAACATCCTTGGACCAGCGAAACATGCTTGCCGCAGCGCTCG
TGCGTCTTCCATAGGGCGCAGCAGACACGTTTTGCCCGCGCCGCACCGAC
CGTCGCAGCTGCTTGCACTCCGTGTTGACTACTTCTGTACTGTGTTGGGG
GTCGCTTGGGCGCAGGCCGGTGTCGTGGACGTCCCGGTCTTTTCGTTTTT
CATGGGGAACATCGATGAGAATTCGCCCACCGGCATACTCACCCTGGGAG
GCGTGAATCAGACTCACTACGAAGGTAATTGCTTCCCTAAGCCGATTCTT
TCTTTCCTACGACTTTTATTTTTGAGGGGGGGGGTGGCGGCATCAAGGCC
AAGTTTTTCCTGATTGGCCGGTTTCCTATGGGGAAAATACATTCACGGTC
TGAAGATTCCCATTAAGTTAAGCGGAGGTACATGGAGGCCAATTCAGCAG
CCGTATACTCCGCTTGACTCATGTAAATTGATAATGCGACGCGTGCTTGC
CCAGAAGAGGAGTCAGCGCCCGTAGCAGAGTAAAGCTATCACCTCAGCTC
CGACGGGAAGTGGATGTAGTATAACAAACTTGTAAGAAAGTTTTCACCTA
AATCCCACGCCGTGTACGCCCTGGCCACAGCCTGTTTGTGGCTCTCCGGC
GAGATATGGCCTCGAAATCTCGCCCTTCCCCTTCACCCCTACGAAAAACA
CTCACATACCCGCAGGCTGTCTTGAGTGGGTGGATGTTTCGCAGGAACAG
AAGGATGTCCCCGATGGCTTCTGGTCCGTGGTGCTGAAGGATGTTAAGGT
AGGGTCTGAGAGCATGCTGCGGGGGGAAGCGACGGCCTTCATCGATACCG
CGACGTCGCTGGTCGTGGGTCCAAAGGCAGACATCGGCGTGATCGCGGGC
GAGCTCGGGGCGTTTTGCGTCAAGTTCCTGGAAACGTCTGCTTCCGAAAT
CGAGGAGGCAAGTCCCCCCTCCCCTCCTAAAGCTCTAGATTCCGCCCACT
CTTGAGAGCGTTCAGAGACGAGCATCTAAAATAAACAGCAGTGGAGTCTC
GATTGCAGCCTCGTGCTGTTTACCGAGCGAGGTTGTGCTTAGACACACGA
CCAATGGCGTGAAGAGAATGTTTTCGATGTGCATCTCTCGTCTTCAAGGC
GTTGGCGCTTGATCCGGACGACGTGTGAGGCAGGACTTGACTGTTTGTTT
AATAACAACACCACCGCTGCCTAAAGAAATCTCGCCGAGACACCTGTCAC
CCGTCACCGGTCGTGCGTAAAACATGTTGCCACCCGCACGCATTTGGAAG
CTGTGGACCATTTTCTTTTACCACTATAGGCAATACGTAGCTGTTTCGAT
GCCGCGCGTTCGCGGCGTTCGACATCGTACTTACCCTCCCTCATCCGCGG
CTGCGTTTTTACTAGCCTACCCGCTAGAAGGGGAAACGCCTAGTGCTTTT
GGCTCCTTAGGATACAACGTCGCTGTCGCGTGTGTGTGAAGGGGTACCCG
TCGATACCAGCCCCCCCCTACGGTCTGTCGTCTCGTAGCTCTAAACGAGG
CGTAGCGCGAGGATGAGTTCCTCTTCTTGAGAGTCCCGCATCACTTATCC
TCGTCCGCTACGTCTTGGCGCGTGGGCGCTTTCCACTACCGCGGGCTGAG
CGATGCGGGCGCGCGCGTTCAATTTTACAAACGCGAGGGCTGGTCGCGGA
GGTTATCGGTATCGATACATTCCAGGATAAACGAATACGTCATGTAGCAC
CCGTGAATTCCGTCTCTCGCGACACTTGGTGGAACTAGCTCTCCTCTCCT
CTTATGTGTGTTGGCAGGTCGACTGCGTGAATGACGCTGAAGACGTGGAG
CTGATTCTCTTGGATTGCGACACGGAGTTTGACGACATTAGCTTCTTCTT
TGGCGGCGACGACTTTACTCTAAAAGTGAGCAACCCCTCCCTCCCCATCC
GTGCGGCAGCCGTCCGAGCTAGTGCGCCATCAAATTGCCTCGCCGAAGGC
TAACGTGTATAGACCTAGATGCTCTGCCGGCGCTTTACGCGGGAAAGTAA
ATACCTTCGATCAATCACACACTTGCGCGGGGTGAGGATGCGACGACGCC
CGAAACAGTCGACCCAAATTTAGGAAATTCCCCTCCCCCCCCCAAAAGAA
CTGTCGAGAGAATCAGGAGACATCCTGTCCTCTTATCTTCCAAGTAATGA
TGGGATGTCTGGTTTCGTCCGGCTGGATGTAGCGTTGGCTTTCGTTTGCG
ATGACGTCATACATATTTTCACCGTCAACGCGTGCGGAAAATCGTTCGAA
AGGGCCTGTTCTCGCCACGTGACGTTCGCCATTCTCTTGTTCCCGCGTGC
ACACCCACGCACGACCTTCGGAAAAAACTCCTTCGGTAATATGTCGTCAG
TCAAGTGATTTGCTCCAGCCGTTGGAGGATTTCGAGACCTCGAAGCAATC
GTCATCAAACCCCTGGTGCCTCTTTGGTATGCTGGGAGAAGACATGGACA
ACACATGGTAAGATGGCGTGTAATGTCTGTGGGAAGGGAACGAGGGGGGC
GGGGGGGGTGCGGTCTGTTTTTTTCCCAATGGTCGCCGCTGCTCTATGAC
GACAGGTGATATCCTATATAATTGTATTCCATATCCCTTGCGCCCTCACG
CGTAGAAGATTCCCAAGGCGAACGCCACGCATAGCACCGCAAAGCGTTGT
TTTTACGCGCTCGTACCTCATATGCGCGTGCATCTCCCCTTCACGATTTA
ATTATGTGCGACCGAGAGGGACGCGACGGGGTCATACCACGGTGATAAAA
AATCTCAGTGCCTTGTTTGTTCTTGGCATCCTCCCCCCCCTCCCCCTTTA
TGATTAACGTCCGCGCAGGATCCTCGGCGACTCATTCCTGCGAGCTTTCT
ACACGGCGTACAATGTCCATGACAGGACCGTCGGATTGGCGCCAGCTACG
AACCACCGGAAAGGCGATGAGTGCGACGCCGACGCGAATTTAGGAGCGTC
GCACCCTTCCTTGACGAGCGCGGACGATACCGAAGGAAGTAATGCTGCTG
ACGATGATGGTGGTGGCGAAGGAAGCTCGAAAACAGCGCCCGCTGCGCAT
AAGGACTCCGGCGAGGACGACGACGAGAAACACCCACCGGGTTTGATCGC
CGTCGCGGTGCCCGCAGTCGTTGGAACGATCGTACTGTTTTCTGCGGTGG
TAGGCCTCGTCCTGCTTGGGCGGCATGTATGGGCGGGGAAGAAGTACCGT
CACTTGGGCGGGGACATGGTAGAGATGGCGGACACAGCAGTCAGAGTCCC
TATGCCGGAGGATGACTTTTTGCAGGCGAGTGGGCCTCGGGGCGACTCTG
GCGTAGGTGGCGGCAAGAGGGTTGTCCTCAAAGGAATTTACGAGGATGGT
GACGAAGATGAGGTCGATGTAGACCTAGGGGGAAAAGGTCGCGGCGGGCT
GGGAGGGTCAACCAAGGCGAATGTGTTCGGCAGGCTGCTTAGCAGCCCCG
ACGAGGAGGGATTTGCGGCATTCGATGATGATGAAAACGAGGGCCTGGGG
GCTCAATCTGGCGGGCGGCAGAGCGATATTTGAAAGGGTTTTATTCCGCA
GGTCACAGCGTCGAGATCGTAAGGCATTGCAAGCATCCCCAGCGCGTTAC
CTCGTTCCTTTGAGCATCATCAGCTGTCGTAAACAAGCAGTACAAACCTC
AGGTTAATTCAAGCTTTTGTCTAGTGTTTACATTGTTTTCTTGCGTGCTT
CCTACAGTATACTTCAAGGAGGAGCACCGTTCCTCTTGCGGTCGAACCTC
CGCAATCAGATCCGATCAGATCCGCTATGAAAAGGGGAACGTTCCACTAT
GTGTTGTTGGATAAAGCATCTGTCTCGAGACTAAAGTCATCTACTCCTTC
GTGGATCACTATTATTAGGCAGACCTAAGTGGCGATGCGATGTATGAGAC
GTCAGGCCCACAAACCAAACGGTGGCGTTGAAAGGTTTGTTGCGCCTTCC
GAAGGATACGGATGTGCGTGTCATGGTGCCATAGGATAGTCGTGTGCTTT
TCCGTCTGTGCGTGTTTGTGTGTATCAAAATGCGAAGGTTATCTAAGGGG
GTCTATGCCGCCGGCAAGTTAGTCGCACGAAGGGCCCCCTGCTAACGGAG
AAGCATCTGAACATTTTTGACATCCTATGCACCGTACATCCGTAGGGTGC
GTGTGTACTATGTAGCGTGTTGAGTAATCATCCGACGCTGTGTGTTCTGC
TCCTGTTGATAGTTGACCGATCCTTGTTGTGTGAAGCGTTCAGCAAATCT
GGATGCGATAGTAGTTGAGCTGATTGTATGTAAAATGTGGATGTGGATGG
GGGGGTGGTGACCTTATTTCGTGCACGGAATCGTCTGTGCGGTCCCTGTA
GAACAGGTGTAGGGGCAGGGAACAATATTGATTTTCACAACTGTGAATAG
GCGGTTGTGGGAAAAATCTACGAGGAAAACAGCAGGAGACACTCCAAAAA
TTCAGAGCACAGTAGCAAGGTAGTAACGACGAGGCCTAAGGTAGATCAGT
GCACGAGGCGTTAGTTGTCCATCCTCCCGTTTTTTCCTGCACTTTTTTAA
CGCCGTATTCACGGACTACAATGATTACTTATTCGTACCAGGTAGTTTTG
TTTTGCCGGTATGAACCTCCCGTAACGCTCCGCGACAAGAATAGGTGACT
TCTTTTGTGTAAGGTTTTTGGGGAACTTGAGCTCATCAACCCAAAGGACT
GCAGATAATATCAACATTTCGATGTGGATGAAAGTACAGTATTGAGGCAA
TCCACAGTAATAGTAGGGGCAGCGCCAAAAAAACTCTCTACAGAACAATC
TGGCCAGAGACAATTTATTTTAATGTACAATCCCACAGACTTGTACGATA
CACGCTGGTGCAGTATATATGTATGTGTGGTCATCACAAACAGCAAGAGT
AAGGATCAGCGGGGTAAGACTGCCAACCCTGCTCGTGGTCAGCTGAACAG
GAATAATGAAAATTTCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig972:18947..27213- >mRNA_F-serratus_M_contig972.21049.1 ID=mRNA_F-serratus_M_contig972.21049.1|Name=mRNA_F-serratus_M_contig972.21049.1|organism=Fucus serratus male|type=CDS|length=3840bp|location=Sequence derived from alignment at F-serratus_M_contig972:18947..27213- (Fucus serratus male) ATGGTGCAGGCACGAGATGGTTGCCATTGCGCGTCCATTGCGGCACTCAA ACGCCGGATAATTTCCCCCGCAGCTTCTATTTCACTGGCAGTAGTCCTGA TCATGCTTTTCGCAAGCAATGAGGCCAAAAAGGCCCCAATCGCATCAAGC ATTACCAGGAGAGCTCAATACCCTTTTCCCACGTCAGTTTGGGAGCATCG ATCACGCAGAAAGCTTGGTGATGACGGTAAAATGGGAGTCACTGATATTC ACGACTGCGAGAACCTCCAGTACACCTCCACGATCGGCATCGGCACCCCA TCCCAGGAGCTGAAGGTCACGCTGAACACCGGAAGCTACGACTTGTGGAT GGTGCAGGCACGAGATGGTTGCCATTGCGCGTCCATTGCGGCACTCAAAC GCCGGATAATTTCCCCCGCAGCTTCTATTTCACTGGCAGTAGTCCTGATC ATGCTTTTCGCAAGCAATGAGGCCAAAAAGGCCCCAATCGCATCAAGCAT TACCAGGAGAGCTCAATACCCTTTTCCCACGTCAGTTTGGGAGCATCGAT CACGCAGAAAGCTTGGTGATGACGGTAAAATGGGAGTCACTGATATTCAC GACTGCGAGAACCTCCAGTACACCTCCACGATCGGCATCGGCACCCCATC CCAGGAGCTGAAGGTCACGCTGAACACCGGAAGCTACGACTTGTGGGTGG CGAGCACCGAGTGCGACTCCTGCGGAGCAACTCATGGGTACGACTCTTCT GCGTCGAGCACCTACATGCCCAACGGAGAGGAGTTCAGCGTGTTGTACGA AAACGGCATGGGGGGCACGGGTGGCGAGCACCGAGTGCGACTCCTGCGGA GCAACTCATGGGTACGACTCTTCTGCGTCGAGCACCTACATGCCCAACGG AGAGGAGTTCAGCGTGTTGTACGAAAACGGCATGGGGGGCACGGGATTCC TGTCCATGGACAAGCTGACTGTGGGAGGGCTCTCAACGACCGTGACCTTC GGAGAGATGACCATGGCTGACCTGCTGGAGAACTGCGACGAAATGGACGG GATGATGGGCATGGGCCTCTCGAACAAAGACGGCCAGAACGCCTTCGAAG ACATGCTCGATGATTCCTGTCCATGGACAAGCTGACTGTGGGAGGGCTCT CAACGACCGTGACCTTCGGAGAGATGACCATGGCTGACCTGCTGGAGAAC TGCGACGAAATGGACGGGATGATGGGCATGGGCCTCTCGAACAAAGACGG CCAGAACGCCTTCGAAGACATGCTCGATGCCGGTGTCGTGGACGTCCCGG TCTTTTCGTTTTTCATGGGGAACATCGATGAGAATTCGCCCACCGGCATA CTCACCCTGGGAGGCGTGAATCAGACTCACTACGAAGGCCGGTGTCGTGG ACGTCCCGGTCTTTTCGTTTTTCATGGGGAACATCGATGAGAATTCGCCC ACCGGCATACTCACCCTGGGAGGCGTGAATCAGACTCACTACGAAGGCTG TCTTGAGTGGGTGGATGTTTCGCAGGAACAGAAGGATGTCCCCGATGGCT TCTGGTCCGTGGTGCTGAAGGATGTTAAGGTAGGGTCTGAGAGCATGCTG CGGGGGGAAGCGACGGCCTTCATCGATACCGCGACGTCGCTGGTCGTGGG TCCAAAGGCAGACATCGGCGTGATCGCGGGCGAGCTCGGGGCGTTTTGCG TCAAGTTCCTGGAAACGTCTGCTTCCGAAATCGAGGAGGCTGTCTTGAGT GGGTGGATGTTTCGCAGGAACAGAAGGATGTCCCCGATGGCTTCTGGTCC GTGGTGCTGAAGGATGTTAAGGTAGGGTCTGAGAGCATGCTGCGGGGGGA AGCGACGGCCTTCATCGATACCGCGACGTCGCTGGTCGTGGGTCCAAAGG CAGACATCGGCGTGATCGCGGGCGAGCTCGGGGCGTTTTGCGTCAAGTTC CTGGAAACGTCTGCTTCCGAAATCGAGGAGGTCGACTGCGTGAATGACGC TGAAGACGTGGAGCTGATTCTCTTGGATTGCGACACGGAGTTTGACGACA TTAGCTTCTTCTTTGGCGGCGACGACTTTACTCTAAAAGTCGACTGCGTG AATGACGCTGAAGACGTGGAGCTGATTCTCTTGGATTGCGACACGGAGTT TGACGACATTAGCTTCTTCTTTGGCGGCGACGACTTTACTCTAAAATCAA GTGATTTGCTCCAGCCGTTGGAGGATTTCGAGACCTCGAAGCAATCGTCA TCAAACCCCTGGTGCCTCTTTGGTATGCTGGGAGAAGACATGGACAACAC ATGTCAAGTGATTTGCTCCAGCCGTTGGAGGATTTCGAGACCTCGAAGCA ATCGTCATCAAACCCCTGGTGCCTCTTTGGTATGCTGGGAGAAGACATGG ACAACACATGGATCCTCGGCGACTCATTCCTGCGAGCTTTCTACACGGCG TACAATGTCCATGACAGGACCGTCGGATTGGCGCCAGCTACGAACCACCG GAAAGGCGATGAGTGCGACGCCGACGCGAATTTAGGAGCGTCGCACCCTT CCTTGACGAGCGCGGACGATACCGAAGGAAGTAATGCTGCTGACGATGAT GGTGGTGGCGAAGGAAGCTCGAAAACAGCGCCCGCTGCGCATAAGGACTC CGGCGAGGACGACGACGAGAAACACCCACCGGGTTTGATCGCCGTCGCGG TGCCCGCAGTCGTTGGAACGATCGTACTGTTTTCTGCGGTGGTAGGCCTC GTCCTGCTTGGGCGGCATGTATGGGCGGGGAAGAAGTACCGTCACTTGGG CGGGGACATGGTAGAGATGGCGGACACAGCAGTCAGAGTCCCTATGCCGG AGGATGACTTTTTGCAGGCGAGTGGGCCTCGGGGCGACTCTGGCGTAGGT GGCGGCAAGAGGGTTGTCCTCAAAGGAATTTACGAGGATGGTGACGAAGA TGAGGTCGATGTAGACCTAGGGGGAAAAGGTCGCGGCGGGCTGGGAGGGT CAACCAAGGCGAATGTGTTCGGCAGGCTGCTTAGCAGCCCCGACGAGGAG GGATTTGCGGCATTCGATGATGATGAAAACGAGGGCCTGGGGGCTCAATC TGGCGGGCGGCAGAGCGATATTTGAGATCCTCGGCGACTCATTCCTGCGA GCTTTCTACACGGCGTACAATGTCCATGACAGGACCGTCGGATTGGCGCC AGCTACGAACCACCGGAAAGGCGATGAGTGCGACGCCGACGCGAATTTAG GAGCGTCGCACCCTTCCTTGACGAGCGCGGACGATACCGAAGGAAGTAAT GCTGCTGACGATGATGGTGGTGGCGAAGGAAGCTCGAAAACAGCGCCCGC TGCGCATAAGGACTCCGGCGAGGACGACGACGAGAAACACCCACCGGGTT TGATCGCCGTCGCGGTGCCCGCAGTCGTTGGAACGATCGTACTGTTTTCT GCGGTGGTAGGCCTCGTCCTGCTTGGGCGGCATGTATGGGCGGGGAAGAA GTACCGTCACTTGGGCGGGGACATGGTAGAGATGGCGGACACAGCAGTCA GAGTCCCTATGCCGGAGGATGACTTTTTGCAGGCGAGTGGGCCTCGGGGC GACTCTGGCGTAGGTGGCGGCAAGAGGGTTGTCCTCAAAGGAATTTACGA GGATGGTGACGAAGATGAGGTCGATGTAGACCTAGGGGGAAAAGGTCGCG GCGGGCTGGGAGGGTCAACCAAGGCGAATGTGTTCGGCAGGCTGCTTAGC AGCCCCGACGAGGAGGGATTTGCGGCATTCGATGATGATGAAAACGAGGG CCTGGGGGCTCAATCTGGCGGGCGGCAGAGCGATATTTGA back to top
|