mRNA_F-serratus_M_contig971.21043.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A0K1EC39_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EC39_CHOCO) HSP 1 Score: 239 bits (609), Expect = 7.180e-65 Identity = 133/301 (44.19%), Postives = 167/301 (55.48%), Query Frame = 3 Query: 141 AARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNGPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 1043 AAR L+V G + H+C++ DG +KCWG S GQLGLGD V RG +MGD+LP V LG + G H CA R G++KCWGGN G LG GD RG SMG++LP + LG G A VA C LL D ++KC+G +GQ+G G+ T G+ MGD+L V L GA AA+ CA++ A+KCWG NG+G LG+GD +RGD P EM D LP LG G + G CA+++DG VKCWG N GQ GLGD E G+ EM Sbjct: 62 AARALDVTPGYA----HTCALLVDGAVKCWGEGSAGQLGLGDAVPRGDDPGEMGDDLPAVSLGTGETVEALAAGSFHHCALLRGGRVKCWGGNASGSLGLGDGEGRGLDVGSMGENLPTVDLGTGVTAVALVAGGETNCALLPDRTLKCWGDNGYGQLGLGDVTPR-GNLPGTMGDDLPAVDLGVDGAGTAVFMGAAH--VCALLTRG-----AVKCWGANGHGQLGLGDADHRGDAPGEMGDALPDVDLGAGNLVAALALGRMHSCALLKDGSVKCWGDNERGQLGLGDTELRGDAPGEM 350
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A812PY59_9DINO (UVR8 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PY59_9DINO) HSP 1 Score: 237 bits (604), Expect = 1.220e-64 Identity = 137/317 (43.22%), Postives = 185/317 (58.36%), Query Frame = 3 Query: 105 NVLVVLSMVAMLAARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNG-PCAVMQSDVAASVALKCWGPNGYGSLGVGDH-FNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETY--GNDADEM 1043 +L +LS V +L A EVA+ +S+G H C+M G++KCWG N QLG GD V RG +++MG +LP +DLG A V G H+CA G LKCWG G+LGYGD RG +D MGD LP + LG G A F+C +L + S+KC+G+ +GQ+G G T+N+G ++EMGD+L V L G TA+ + A + CA + +LKCWG YG LG+G + + G EM D LPT LGTG +AVE+ G+ CA +++G VKCWGRN N Q GLG + G+DA+EM Sbjct: 5 KMLALLSAVCILTAVAEEVAK-LSLGDWHVCAMGSQGSVKCWGNNGNAQLGQGDDVRRGDGANEMGKSLPTIDLGTGRHALEVNSGASHNCARLDDGLLKCWGYGHLGRLGYGDQVQRGGNSDEMGDFLPTVELGTGRTAVQLALGYEFSCAVLDNASVKCWGQGGYGQLGIG-TTSNMGAGSSEMGDHLPPVDL---GTGRTAADVTAGSYFACARLDDS-----SLKCWGHGEYGQLGIGSNSYTVGRVSGEMGDNLPTVDLGTGRTAVELSAGVFHACARLDNGSVKCWGRNNNNQLGLGFATSINMGDDANEM 311
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A540WM56_9DELT (Tandem-95 repeat protein n=7 Tax=Myxococcus TaxID=32 RepID=A0A540WM56_9DELT) HSP 1 Score: 243 bits (619), Expect = 2.010e-64 Identity = 137/309 (44.34%), Postives = 177/309 (57.28%), Query Frame = 3 Query: 156 EVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAAN--HFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNG-PCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEMETTYRSLT*G 1073 +V V G H+C++F DG +KCWG+N GQLGL D +RG +MGD LP V LG + + G ++CA G +KCWG N G LG GDT +RG M ++LP + LG G A A+AAN +TC +L D ++KC+G +D Q+G G+ N GD EMGD L V L GA TA +LAA +G CA++ D +KCWG N +G LG+GD +RGDDPDEM D LP LG G +A I G CA+++DG VKCWG N GQ GLGD E G+ EM + G Sbjct: 239 DVPNSVVAGPLHTCAVFQDGRVKCWGFNEYGQLGLEDAANRGDGPGEMGDLLPFVRLGAGQKVTSLHLGAYYTCALLESGAVKCWGRNIAGMLGLGDTQSRGAVPGGMDEALPPVDLGTGRTAK-ALAANGSDYTCAILDDDTVKCWGDSDRAQLGLGDVRNR-GDGPGEMGDALPPVDL---GAGRTAKALAAGSGHTCALLDDDT-----VKCWGYNVFGQLGLGDTEDRGDDPDEMGDALPRVELGAGRTARAIAAGGYSTCALLDDGSVKCWGYNEYGQLGLGDTEPRGDGPGEMAAALPPVNLG 537
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A812N2T7_9DINO (HERC4 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812N2T7_9DINO) HSP 1 Score: 247 bits (630), Expect = 7.170e-64 Identity = 133/295 (45.08%), Postives = 174/295 (58.98%), Query Frame = 3 Query: 162 AEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAA-YNGPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 1043 A V GG H+C+ DDG++KCWG N+ GQLGLG TV G S++MGD+LP V LG A + G H+CA G +KCWG ND GQLG G T RG + MGD LP ++LG G +A A + C L DG++KC+GR GQ+G G T++ GD ++EMGD+L V L G +A +AA + CA + ++KCWG N YG LG+G + GD EM D LP LG G SAVE+ G CA ++DG +KCWGRN GQ GLG+ + G+ + EM Sbjct: 79 AVDVVPGGWHTCARLDDGSVKCWGSNNQGQLGLGTTVQMGDGSNEMGDHLPAVALGTGRSAVEMAAGWGHNCARLDDGSVKCWGNNDNGQLGLGTTDDRGGGSSEMGDYLPAVALGTGRSAVEVAAGWYHICARLDDGTVKCWGRNTHGQLGLG-TTDDRGDASSEMGDHLPAVAL---GTGRSAVEVAAGWGHTCARLDDG-----SVKCWGNNEYGQLGLGTTEHMGDGTSEMGDYLPAVALGAGRSAVEVAAGARHTCARLDDGSIKCWGRNAQGQLGLGNTDNMGDGSSEM 364
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A848LHZ3_9DELT (Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LHZ3_9DELT) HSP 1 Score: 239 bits (610), Expect = 8.980e-64 Identity = 137/318 (43.08%), Postives = 177/318 (55.66%), Query Frame = 3 Query: 90 GRGIGNVLVVLSMVAMLAARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNGPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 1043 G G G + LS V + R + G ++C++ DD ++KCWG NS GQLGLGDT RG +MGD LP VDLG A +T G H+CA +KCWG N+FGQLG GDT RG+ MGD+LP + LG G A VA + TC LL DGSI+C+G ++GQ+G G+ + GD EM L V L G A SL + CA++ +KCWG N +G LG+GD +RG P +M D LP LGTG +A + TG+ C ++DG VKCWGRN GQ GLGD + G+ M Sbjct: 281 GNGPGEMDDALSPVDLGTGRTARAL--TANGSGYTCALLDDASVKCWGDNSHGQLGLGDTRSRGDGPGEMGDALPPVDLGRGRTAKALTSGYSHTCALLDDDSVKCWGYNEFGQLGLGDTRIRGDGPGEMGDALPTVKLGAGRTARAIVAGGYSTCALLDDGSIQCWGYNEYGQLGLGDTAHR-GDGPGEMEAALPRVNL-GTGRTAKALSLGEFY-TCALLDD-----ATVKCWGRNFHGQLGLGDAEDRGLSPSQMGDALPPVNLGTGRTATALTTGV-HTCVTLDDGDVKCWGRNTYGQLGLGDTKERGDGRSAM 587 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig971.21043.1 >prot_F-serratus_M_contig971.21043.1 ID=prot_F-serratus_M_contig971.21043.1|Name=mRNA_F-serratus_M_contig971.21043.1|organism=Fucus serratus male|type=polypeptide|length=355bp MTEGRSRQGIVSAKLPCLVRCTSRSFGGGRGIGNVLVVLSMVAMLAARCLback to top mRNA from alignment at F-serratus_M_contig971:40090..63592- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig971.21043.1 ID=mRNA_F-serratus_M_contig971.21043.1|Name=mRNA_F-serratus_M_contig971.21043.1|organism=Fucus serratus male|type=mRNA|length=23503bp|location=Sequence derived from alignment at F-serratus_M_contig971:40090..63592- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig971:40090..63592- >mRNA_F-serratus_M_contig971.21043.1 ID=mRNA_F-serratus_M_contig971.21043.1|Name=mRNA_F-serratus_M_contig971.21043.1|organism=Fucus serratus male|type=CDS|length=2130bp|location=Sequence derived from alignment at F-serratus_M_contig971:40090..63592- (Fucus serratus male)back to top |