mRNA_F-serratus_M_contig97.21039.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig97.21039.1
Unique NamemRNA_F-serratus_M_contig97.21039.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Match: A0A176WID5_MARPO (PlsC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WID5_MARPO)

HSP 1 Score: 138 bits (348), Expect = 7.010e-31
Identity = 138/539 (25.60%), Postives = 215/539 (39.89%), Query Frame = 1 
Query:   13 LLLFISEADGIDLESNANFRFLSTSFDAWYMVIDDEDRSTFQQLTDRVAKFLQTLGVSEERQAVLVGSSFGGLLVANLAHQHEAWIKGLVLVNPATSYARSAWRIIASFVANAPGPKAFRMT-VALALAIGLP---AAAMMSEYTREFEALPPQEVPAWLMDLTQEWLGHSSRLFGGGSQEQVRWRLKHWMESGSNQVDSFLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPTCQQVVLSGVGHAALHSRCEANLGALIKFSIIYDRDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLPETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVNDRGEVKEGLGGVPDYEEGRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHPMVGVAGVEKLSTVRRKSVSGRRLVGAARGVASSTAKVFGVALGRVGNAGVWATNKVVRASKRTIPCYYDVPRRELVDDCAPRGGTPGYGSFSILHERAVEIMAKLGAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQK 1617
            LLLFI   D + L    + R L+  F+   + I  +DR++F  L + V K ++           L+G SFGG +   +A ++      LVLVNPATS+  S  + +   +  AP P+ FR+   AL+  +G P   A+A +      +E LP       L       L     +     +E + W++K  +  G+   +S L  +K  +L++   +D M PSV+EA RL  ++P  +  +    GH  L       + +LIK +            + +  SKK                        DP+ DF     D++     T    + +  SP+FLS  + G ++ GL   P   EG+ +LFVGNH  +G D  ++V + LK+KG+ +RGL HP++ +                                                                     E  D   P GG               ++    G VPV   N+ +LL  GEA LLYPGGV+EAL +K
Sbjct:  320 LLLFIPGMDSMGLGLLLHQRKLARLFEVRCLHIPLQDRTSFVGLVEFVEKVVKEESAKRPGPIYLLGESFGGSMCLTIAARNPKLDIVLVLVNPATSFGSSQLQPLIPLLPIAP-PEVFRLLPFALSFTMGDPVKMASASVDSTLPIWEKLPK------LAHALTSLLPTLPTIADLMPRETLAWKIK-LLSDGAKYANSRLHAVKADILLLVSGKDQMLPSVDEARRLKEILPQTKIRLFKDSGHTLLLEE-GVEVASLIKAT------------NTLRHSKK-----------------------FDPIRDFRPPQQDEIELTRNTSIRTVRQIFSPIFLSATEDGRIRRGL---PKLTEGKPLLFVGNHTFIGFDLGMIVDEFLKNKGILLRGLAHPVMSI---------------------------------------------------------------------ENQDLQEPGGG---------------DLFRLFGTVPVNGNNLYRLLSRGEAALLYPGGVREALKRK 727
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BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Match: A0A0K6S9U4_9ALVE (AB hydrolase-1 domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S9U4_9ALVE)

HSP 1 Score: 138 bits (347), Expect = 1.090e-30
Identity = 164/640 (25.62%), Postives = 256/640 (40.00%), Query Frame = 1 
Query:  130 TFQQLTDRVAKFLQTLGVSEERQAV-LVGSSFGGLLVANLAHQHEAW-----------------------------IKGLVLVNPATSYARSAWRIIASFVANAPGPKAFRMTVALALAIGLPAAAMMSEYT------REFEALPPQ-----------EVPAWLMDLTQEWLGHSSRLFGGGSQE--------------QVRWRLKHWMESGSNQVDSFLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPTCQQVVLSGVGHAALHSRCEANLGALIKFSIIYD-----RDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLPETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVND-RGEVKEGLGGVPDYEE--GRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHPMVGVAGVE----------------KLSTVRRKS---VSGRRLVGAARGVASSTAKVFGV------ALGR----------------------VGNAGVWATNKVVRASKRTI-----PCYYDVPRRELVDDCAPRGGTPGYGSFSILH-------------ERAVEIMAKL----------GAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQK 1617
            ++  L +   +FLQ   V   +  V +VG SFG LL   +A + +                               ++ LV++N A+SY  + W ++   V    G  A+ +    A    LP    +  Y       RE +    Q           E  A +  L    +  ++R FGG  +               ++ WRL+ W+  G + V+S L D+K+P LV+AGSED + PSVEEA RL + +    QV++ G GH  L  R   +L  L++ + +++     R  + + +      K+  ++    ++QK    +  +        +F     DD+ +        +   TSPVF+S +   G    GL  VP   E  GR +L VGNHQL GID  ++V + LK+KG+ VRG+ HP + +   E                ++S+V RK+   V+  R +G   G   +  KVF        ALG                       VG  G     +VV            P  +D  R     + AP     G G                   ER  E+   L          GAVPVTPRN ++L++ G+  +L+PGGV+E  H+K
Sbjct:  187 SYLDLVNACVRFLQRAAVQRRKMRVTIVGESFGALLALGIALRWQTLSRASAVNELEGASGEEDEDVSVARLDGGSLESLVILNSASSYDDTFWGVLKPLVERLQGGAAYTLAAGAAYFATLPDDKQLRAYLSRLVLRREGKEGGQQKNSGGGNETETENFAGIRRLVDVQVERAARFFGGVFETWRRLEDSTSRMPPPELSWRLERWLSEGVSTVNSRLSDLKIPTLVVAGSEDRLLPSVEEAVRLVQAVGPSAQVLVEGSGHNVLDKRFSIDL--LMEEAGLFEKAGGERGWMPRFLRNRVGGKEVVEVDLERERQKRXREKVERWFK-----NFTAPQLDDLTEKDTREVEFLVNTTSPVFISSDAVTGRRTFGLDYVPSPAELAGRPVLLVGNHQLFGIDLGVIVLRFLKEKGVLVRGMGHPFIFLDRTEAEGGEGRGRGDFGDDDEMSSVWRKTFAVVNTSREIG--EGTEPAGPKVFTTPEEAQEALGSLIASTSFVELLQGSEGEGGGSAVGAGGTRGGGRVVEREXXXXXXXXRPFPFDAER-----NLAPFLSRVGRGXXXXXXXXXXXXXXXXXXSERKSELPESLQGIENRFERFGAVPVTPRNFVRLMQRGDWAMLFPGGVREVYHRK 812
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BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Match: A0A061S3T3_9CHLO (Acyltransferase-like protein chloroplastic-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S3T3_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 1.220e-30
Identity = 144/544 (26.47%), Postives = 221/544 (40.62%), Query Frame = 1 
Query:   13 LLLFISEADGIDLESNANFRFLSTSFDAWYMVIDDEDRSTFQQLTDRVAKFLQTLGVSEE---RQAVLVGSSFGGLLVANLAHQHEAWIKGLVLVNPATSYARSA----WRIIASFVANAPG--PKAFRMTVALALAIGLPAAAMMSEYTREFEALPPQEVPAWLMDLTQEWLGHSSRLFGGGSQEQVRWRLKHWMESGSNQVDSFLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPTCQQVVLSGVGHAALHSRCEANLGALIKFSIIYDRDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLPETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVNDRGEVKEGLGGVPDYEEGRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHPMVGVAGVEKLSTVRRKSVSGRRLVGAARGVASSTAKVFGVALGRVGNAGVWATNKVVRASKRTIPCYYDVPRRELVDDCAPRGGTPGYGSFSILHERAVEIMAKLGAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQK 1617
            L L+    DG  L + + F  +  +FD + M ID  DR++F +L     +FL+   +SE    R   LV  S+G LL   +A +  +    LVLVNPAT+  ++      +I A  +A + G  P   R  + LAL   L + A M+E+    +          +  L Q+    + +L        + WRLK  M     ++   L+ ++  VLV+AG ED + PS +EA RL  L+      V+ G GH+ L  R   +L ++IK    Y  +                    R    K R        G    L+   + D   ++  +     +   TSPVF S    G + +GL  + D    R ILF+GNHQLL +D   ++++ L+ KG  +RGLTHPM+                                                                + D P+ +  +           G  S +  RA       G+VPV P  M +LL+AGE +LLYPGG +EAL ++
Sbjct:  124 LCLYFPGIDGQGLTATSQFVRMGKAFDVYAMTIDASDRTSFDRLVQLAGEFLEH-ALSESPASRPVYLVADSWGALLALGVALERPSLCHRLVLVNPATTETQTGLSRLMQIAAPALAISGGALPPGLRTALPLALGPALGSPARMAEHWFRQQRASAGAAREAVGALVQQAEALAEQL----PPATLDWRLK-MMRRAVRKLGPSLRRVEQRVLVVAGEEDRLLPSADEAKRLGGLLQRSATRVIPGAGHSLLQER-GVDLVSIIKEEGFYTTE--------------------RRFTSKPRQKHIGNNFGKAEALELPTEGD---LERAFDDYRGIGTLTSPVFFSEAPDGTISQGLDNL-DTSIDRPILFIGNHQLLALDMSFMIREFLQKKGRLMRGLTHPMI----------------------------------------------------------------FVDTPQEQNSN-----------GPMSSM--RAT--FTSFGSVPVGPTTMYRLLQAGEMILLYPGGAREALKKR 557
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BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Match: A0A200QGQ4_9MAGN (Diacylglycerol acyltransferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QGQ4_9MAGN)

HSP 1 Score: 136 bits (343), Expect = 2.250e-30
Identity = 146/538 (27.14%), Postives = 210/538 (39.03%), Query Frame = 1 
Query:   13 LLLFISEADGIDLESNANFRFLSTSFDAWYMVIDDEDRSTFQ---QLTDRVAKFLQTLGVSEERQAVLVGSSFGGLLVANLAHQHEAWIKGLVLVNPATSYARSAWRIIASFVANAPGPKAFRMTVALALAIGLPAAAMMSEYTREFEALPPQEVPAWLMDLTQEWLGHSSRLFGGGSQEQVRWRLKHWMESGSNQVDSFLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPTCQQVVLSGVGHAALHSRCEANLGALIKFSIIYDRDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLPETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVNDRGEVKEGLGGVPDYEEGRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHPMVGVAGVEKLSTVRRKSVSGRRLVGAARGVASSTAKVFGVALGRVGNAGVWATNKVVRASKRTIPCYYDVPRRELVDDCAPRGGTPGYGSFSILHERAVEIMAKLGAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQK 1617
            LLL++   DG+ LE  +  + L   FD W + I  +DR+ F+   +L DR  K  +  G S  R   LVG S GG L   +A ++      L+L NPATS+ +S  R +  FV   P          LA  IG P    ++   RE   LP  +    L +     L     L     +E + W+LK  +ES S+  +S +  +K   L++A   D + PS+EEA RLS L+PTCQ        HA L    + +L  +IK +  Y R                                   T   D V DF +       K V      ++   +PV LS  + G++  GL G+P   EG  +L VG H L+G D   LV   L  + + VRG+ HP++    VE+            RL                                                              P   +F ++          +G+VPV+  N  +LL     VLLYPGGV+EALH+K
Sbjct:  156 LLLYLPGMDGVGLELISQHQRLGKVFDIWCLHIPVQDRTPFRDLVRLVDRTVK--EENGRSPNRPIYLVGESIGGCLALAVAARNPTIDLMLILANPATSFRKSQLRNLVPFVEAIPEQLHIGFPYILAAIIGDPLRMALASGQRE---LPLPQTIRELSENLSALLSSIPVLADALPRESLLWKLK-MLESASSFANSCVHAVKAQTLILASGRDQLLPSLEEAERLSGLLPTCQIRNFKDSRHA-LFMEDDFDLVTVIKGAGFYRR-----------------------------------TRNVDYVSDF-IPPTPSEFKQVCESYRWLDIAVNPVMLSTLENGKIVRGLAGIPS--EGPVVL-VGYHMLMGFDLGPLVTSFLSKRNILVRGIAHPLLFQKEVEQ------------RL--------------------------------------------------------------PDSSTFDVIRV--------MGSVPVSASNFYRLLATKSHVLLYPGGVREALHRK 565
[Close]
BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Match: K8E9I0_9CHLO (Hydrolase_4 domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8E9I0_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 4.150e-30
Identity = 146/556 (26.26%), Postives = 221/556 (39.75%), Query Frame = 1 
Query:    7 RDLLLFISEADGIDLESNANFRFLSTSFDAWYMVIDDEDRSTFQQLTDRVAKFLQTLGVSE-ERQAVLVGSSFGGLLVANLAHQHEAWIKGLVLVNPATSYARSAWRIIASFVANAPGPKAFRMTVALALAIGLPAAAMMSEYTREFEALPPQEVPAWLMDLTQEWLGHSSRLFGGGSQEQVRWRLKHWMES--------GSNQVDSFLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPT--CQQVVLSGVGHAALHSRCEANLGALIKFSIIYDRDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLPETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVNDR-GEVKEGLGGVPDYEE--GRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHPMVGVAGVEKLSTVRRKSVSGRRLVGAARGVASSTAKVFGVALGRVGNAGVWATNKVVRASKRTIPCYYDVP-----RRELVDDCAPRGGTPGYGSFSILHERAVEIMAKLGAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQK 1617
            + L++++   DG    +++ F  LS  FD   + I   DRS   ++ D V  F++       ER+  L+G S GG +   +  +H   +    +VNPA+S+ RS W  +   +   P            L  GLP A  +S    +   L  + V    +  T E +       G  +    R  LKH ++           N  +  L++ ++PVLV+A + D + PS EEA RL +L+ T  C+  +L G  HAAL  +   ++  L+K      R + D+                               +  DP   F    +  + K    G   +    SPVF S  +R G+V  GL  VP +     R +L VGNHQ    D   LV + LK K + VRGL HP+V          ++ +                                      K +R + +  P    +P     +R       P GG  G G+FS             GAVPV+ +N  KLLKA E VLL+PGGV+EA  +K
Sbjct:  103 KPLMIYLPGLDGTGFSASSQFATLSKEFDLVCLNIPSNDRSDVFEIVDIVRAFIERAKEEHPEREVQLIGESMGGAMSLFVCLKHPELVTRATVVNPASSFDRSVWPSVGPLLPQIPEN----------LYAGLPFA--LSPVLIDPIRLATEAVELGNLSETLEKMTAMLPALGSLATIIPRDTLKHRLQILTDACVYINDNDGEK-LKNARVPVLVVASTNDLLIPSNEEAPRLQKLMGTKKCKIEILEGASHAALQEK-GMDIVHLMKRHDWISRPVEDE-----------------------------NRLSRDPT--FTPPSESQIEK-ARDGLQFLRSVHSPVFFSTRERDGQVINGLDAVPTWRGTGNRPVLLVGNHQTFAPDLGFLVDEFLKQKNVCVRGLAHPVVSRDNGNGTGAMQTEDDDEEEN----------------------------PLEKQLREATKNTPFAQFMPESKEEKRRQRRAGVPNGGPFGGGNFS-----------DFGAVPVSGKNFYKLLKANETVLLFPGGVREAFKRK 573
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A176WID5_MARPO7.010e-3125.60PlsC domain-containing protein n=2 Tax=Marchantia ... [more]
A0A0K6S9U4_9ALVE1.090e-3025.63AB hydrolase-1 domain-containing protein n=2 Tax=C... [more]
A0A061S3T3_9CHLO1.220e-3026.47Acyltransferase-like protein chloroplastic-like n=... [more]
A0A200QGQ4_9MAGN2.250e-3027.14Diacylglycerol acyltransferase n=1 Tax=Macleaya co... [more]
K8E9I0_9CHLO4.150e-3026.26Hydrolase_4 domain-containing protein n=1 Tax=Bath... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:829195..833394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score463.0
Seed ortholog evalue1.9e-127
Seed eggNOG ortholog2880.D7G6D7
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010287,GO:0016101,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0019432,GO:0033306,GO:0034308,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046460,GO:0046463,GO:0046486,GO:0071704,GO:1901576,GO:1901615,GO:1903173
EggNOG free text desc.fatty alcohol metabolic process
EggNOG OGs2QQUD@2759,COG0204@1
Ec32 ortholog descriptionAlpha/beta hydrolase fold containing protein
Ec32 orthologEc-10_001470.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size1623
Cds size1623
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932751.5906873-CDS-F-serratus_M_contig97:829194..8294221622932751.5906873-CDS-F-serratus_M_contig97:829194..829422Fucus serratus maleCDSF-serratus_M_contig97 829195..829422 -
1690964456.2913268-CDS-F-serratus_M_contig97:829194..8294221690964456.2913268-CDS-F-serratus_M_contig97:829194..829422Fucus serratus maleCDSF-serratus_M_contig97 829195..829422 -
1622932751.606285-CDS-F-serratus_M_contig97:829623..8297911622932751.606285-CDS-F-serratus_M_contig97:829623..829791Fucus serratus maleCDSF-serratus_M_contig97 829624..829791 -
1690964456.3045197-CDS-F-serratus_M_contig97:829623..8297911690964456.3045197-CDS-F-serratus_M_contig97:829623..829791Fucus serratus maleCDSF-serratus_M_contig97 829624..829791 -
1622932751.623257-CDS-F-serratus_M_contig97:830195..8302761622932751.623257-CDS-F-serratus_M_contig97:830195..830276Fucus serratus maleCDSF-serratus_M_contig97 830196..830276 -
1690964456.3150625-CDS-F-serratus_M_contig97:830195..8302761690964456.3150625-CDS-F-serratus_M_contig97:830195..830276Fucus serratus maleCDSF-serratus_M_contig97 830196..830276 -
1622932751.6455894-CDS-F-serratus_M_contig97:830388..8305411622932751.6455894-CDS-F-serratus_M_contig97:830388..830541Fucus serratus maleCDSF-serratus_M_contig97 830389..830541 -
1690964456.3261173-CDS-F-serratus_M_contig97:830388..8305411690964456.3261173-CDS-F-serratus_M_contig97:830388..830541Fucus serratus maleCDSF-serratus_M_contig97 830389..830541 -
1622932751.6658502-CDS-F-serratus_M_contig97:830816..8309211622932751.6658502-CDS-F-serratus_M_contig97:830816..830921Fucus serratus maleCDSF-serratus_M_contig97 830817..830921 -
1690964456.3399944-CDS-F-serratus_M_contig97:830816..8309211690964456.3399944-CDS-F-serratus_M_contig97:830816..830921Fucus serratus maleCDSF-serratus_M_contig97 830817..830921 -
1622932751.682223-CDS-F-serratus_M_contig97:831166..8313401622932751.682223-CDS-F-serratus_M_contig97:831166..831340Fucus serratus maleCDSF-serratus_M_contig97 831167..831340 -
1690964456.355338-CDS-F-serratus_M_contig97:831166..8313401690964456.355338-CDS-F-serratus_M_contig97:831166..831340Fucus serratus maleCDSF-serratus_M_contig97 831167..831340 -
1622932751.7023785-CDS-F-serratus_M_contig97:831605..8317791622932751.7023785-CDS-F-serratus_M_contig97:831605..831779Fucus serratus maleCDSF-serratus_M_contig97 831606..831779 -
1690964456.3657506-CDS-F-serratus_M_contig97:831605..8317791690964456.3657506-CDS-F-serratus_M_contig97:831605..831779Fucus serratus maleCDSF-serratus_M_contig97 831606..831779 -
1622932751.7185097-CDS-F-serratus_M_contig97:832029..8321491622932751.7185097-CDS-F-serratus_M_contig97:832029..832149Fucus serratus maleCDSF-serratus_M_contig97 832030..832149 -
1690964456.3753085-CDS-F-serratus_M_contig97:832029..8321491690964456.3753085-CDS-F-serratus_M_contig97:832029..832149Fucus serratus maleCDSF-serratus_M_contig97 832030..832149 -
1622932751.7329621-CDS-F-serratus_M_contig97:832470..8326351622932751.7329621-CDS-F-serratus_M_contig97:832470..832635Fucus serratus maleCDSF-serratus_M_contig97 832471..832635 -
1690964456.3888707-CDS-F-serratus_M_contig97:832470..8326351690964456.3888707-CDS-F-serratus_M_contig97:832470..832635Fucus serratus maleCDSF-serratus_M_contig97 832471..832635 -
1622932751.749957-CDS-F-serratus_M_contig97:832912..8330141622932751.749957-CDS-F-serratus_M_contig97:832912..833014Fucus serratus maleCDSF-serratus_M_contig97 832913..833014 -
1690964456.3977985-CDS-F-serratus_M_contig97:832912..8330141690964456.3977985-CDS-F-serratus_M_contig97:832912..833014Fucus serratus maleCDSF-serratus_M_contig97 832913..833014 -
1622932751.7687254-CDS-F-serratus_M_contig97:833241..8333941622932751.7687254-CDS-F-serratus_M_contig97:833241..833394Fucus serratus maleCDSF-serratus_M_contig97 833242..833394 -
1690964456.4064398-CDS-F-serratus_M_contig97:833241..8333941690964456.4064398-CDS-F-serratus_M_contig97:833241..833394Fucus serratus maleCDSF-serratus_M_contig97 833242..833394 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21039.1prot_F-serratus_M_contig97.21039.1Fucus serratus malepolypeptideF-serratus_M_contig97 829195..833394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig97.21039.1

>prot_F-serratus_M_contig97.21039.1 ID=prot_F-serratus_M_contig97.21039.1|Name=mRNA_F-serratus_M_contig97.21039.1|organism=Fucus serratus male|type=polypeptide|length=541bp
QGRDLLLFISEADGIDLESNANFRFLSTSFDAWYMVIDDEDRSTFQQLTD
RVAKFLQTLGVSEERQAVLVGSSFGGLLVANLAHQHEAWIKGLVLVNPAT
SYARSAWRIIASFVANAPGPKAFRMTVALALAIGLPAAAMMSEYTREFEA
LPPQEVPAWLMDLTQEWLGHSSRLFGGGSQEQVRWRLKHWMESGSNQVDS
FLQDIKLPVLVIAGSEDNMFPSVEEAARLSRLIPTCQQVVLSGVGHAALH
SRCEANLGALIKFSIIYDRDLLDQVMDQVAQSKKAKKIPKRWQQQKMRLP
ETLKTIGADPVLDFNLDMDDDVVKLVWTGTNMMNRFTSPVFLSVNDRGEV
KEGLGGVPDYEEGRSILFVGNHQLLGIDTPILVQKILKDKGMFVRGLTHP
MVGVAGVEKLSTVRRKSVSGRRLVGAARGVASSTAKVFGVALGRVGNAGV
WATNKVVRASKRTIPCYYDVPRRELVDDCAPRGGTPGYGSFSILHERAVE
IMAKLGAVPVTPRNMMKLLKAGEAVLLYPGGVKEALHQKVY
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mRNA from alignment at F-serratus_M_contig97:829195..833394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig97.21039.1 ID=mRNA_F-serratus_M_contig97.21039.1|Name=mRNA_F-serratus_M_contig97.21039.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig97:829195..833394- (Fucus serratus male)
CAGGGTCGGGATCTTCTGTTGTTCATCTCGGAGGCAGATGGAATCGACTT
GGAGTCAAACGCAAACTTCAGGTTCCTTTCGACCTCATTTGACGCGTGGT
ACATGGTCATTGACGACGAAGATCGATCGACCTTCCAGCAGCTCACCGAT
CGGGTACAGTTATAGCCCTTACGTCAACCGGCACCTGGAGCTGTCCTTTT
ATTCCCCCATTACACGCTGCCTTCTTATTTCCATTATTTCACCATTCAAT
GATTGCATGCATGCCGAAAAGCGTGTATTTTTGTCATGAAAGACAGGCCC
CTCTCTTGTCCAAACGTACGTGTCCTTTTTTGAGACTTTCAAAGGACATT
TAGAGGTCGTAATTTCTTTCAGGATGGCAGGTGGCAAAGTTCTTACAAAC
CTTGGGAGTGAGTGAAGAGAGGCAAGCAGTCCTGGTGGGATCATCATTCG
GAGGGTTACTTGTCGCAAACCTGGCTCATCAGGTATTATACTGTACAACA
AGCTACTTGTGGAAGGCGCAGTCGAATACTTCGCGACAATGCTTCCGACC
AAGGACGAGGAGTAGTGTGGATCAATGTATATAATATCAACTTGGGTCCG
TGTTGGTGAATAACCACGAGATTCAAGAGTTGAGAGTTGATCACTGGGTG
GGTGGTGGGTGGAGTTTGTTCAGACCAGACCATCCTGCGCTGAAAGTTCA
CCTCACAAAACATTCCTCTGGCAAGCGATCTCCTCGCAACCCCACTAACC
GGTACGCAGCATGAAGCGTGGATAAAAGGACTCGTCCTGGTGAATCCTGC
CACATCCTACGCTAGGTCCGCCTGGCGCATCATCGCTTCTTTCGTCGCAA
ACGCCCCAGGGCCTAAGGCATTCAGAATGACCGTGGCGCTTGCGCTAGCC
ATTGGATTGCCTGCTGCTGCTATGGTGATGACGGTGTATCGACACGTTGT
TTCTATTATTTATTCTATGTCTGCTGCTCACTGCTTCCTTCCGTCGGATG
GATTCAATTTCATCAATATCATCAAATCATCAATATCATCAAATCATCAA
TATCATCAATATCATCAATATCATCAATATTATCCTGCTTGCATGCATAA
AAATATAATGATTCGAATGTATCGCATATTCACTGGCGTTGAGCATCAAG
AGAGAGAGAGAGTGATCTGCAAGTAAAGCTGTCCATAAATATATACCGTA
CGAAGTACTGTATACGAAGTACTGCGCTAATTATTCAATGTCCAGATGTC
AGAGTATACGCGAGAGTTTGAGGCTCTTCCACCCCAGGAAGTTCCCGCAT
GGCTGATGGACCTGACTCAAGAGTGGTTGGGTCATTCCTCAAGACTCTTT
GGCGGAGGGTCGCAGGTCAAGTGGTGGATGCGTTTCCTCACTTCACGTAT
ATATGTAATATTATACTGGTACCTACAGCCGGTCATAAAACGCTATTATT
ATTACCGGCACTCCAATCAAAACAATACAGCAGTAGAGTGAGCGGTCATA
AGAATACGGTGCGTGGAAGGCAACCCATGGCCTGCCACAACTTGAACGAT
TATAAGAATACGGTTTTGTTGTACTTTCGTCCTTAGCACTTAAAATGTCG
ACTACGGTTCGCCAGGAACAAGTCCGGTGGCGACTAAAACACTGGATGGA
ATCAGGAAGTAATCAGGTGGACTCCTTTCTCCAAGACATCAAGCTGCCCG
TTCTCGTCATTGCTGGGAGTGAGGACAACATGTTTCCTTCGGTCGAAGAG
GCCGCCCGGCTTAGTAGACTGATACCCACGTGTCAACAGGTCGGTTGCCG
TAACCTTTCCGATGGTGCTCGACAATTATTTGACGCTTTTTATAAAGGAT
ATTATGTTTATTATGATCCTACTTGGACATCGTTGAACTGACGCCGGAGG
GTTAAAAGAGGGGTTGAGCAGGGCTGGTAAAGCATTAACAACTATTTAAA
AAAGCTCGACACAGAGATCCTTTATCACAACTACGACGTGCAGCCAGAAC
GACCTTCACAAATAACTTTGAAGTTTTTCGTTCTGCCGACACCTTCATCG
ACAGGTCGTACTGAGTGGAGTTGGGCACGCTGCGCTGCACAGCCGCTGTG
AGGCTAACTTAGGCGCTTTAATCAAATTCTCAATTATTTACGATCGGGAC
TTGTTGGATCAAGTGATGGATCAAGTCGCACAAAGCAAGAAGGCAAAAAA
AATTCCCAAACGATGGCAGCAGCAGAAGGTGACCCGGCGCGATAAGGCAG
CTAGTAGTAATACATATGGGGTGTATTAACCGGTAGAACTACATACTGTA
ACTGCAGCAACAGTGCTCGAAGCGAAGTCAAGCGCTTATGAAAATTTCCG
TGATTATTCGTTCGGCGGTGAACTGTTGTTCATGTTGCTTCCACAACGTC
CTACGACTCTAATCATCGTGGCCCTGTTCGTCCGGCGGAGTAGGGCGGGT
CAATCACCAAAAACATGCTGGAGATGAGACTTCCCGAGACGTTGAAAACA
ATCGGCGCTGACCCAGTACTAGACTTCAATCTAGATATGGACGACGACGT
CGTGAAGCTCGTGTGGACAGGCACCAATGTACGTACTCCACCCTATAGGG
ACCAAGGGAGAGGATCGATGCCGATCTTATTTATGTGCGTAGACGGATCG
TCGAGTCAGTTGCTTACTGAAAAAAGGCGTATCCCATCAATGTATCCCGT
TTGTCTTGAAAGTAGTGCTCGTCATTACCATTAACACCATTGACACAGGA
GAACTGCACGAAATATTTGCGTAGAAGTACGTTGCAACCACTCACGATGG
ACACCATTAGACATACGCTTGCGCTTTTGGCCCCATGACCAACAACTGTT
CAGATGATGAATCGATTCACGAGCCCAGTGTTTCTGTCGGTGAATGACCG
TGGGGAGGTGAAAGAGGGCTTAGGAGGCGTTCCAGATTATGAGGAAGGAC
GGTCGATTTTGTTCGTTGGGAACCACCAACTATTGGGAATAGACACGCCG
ATTCTGGTGAGGCACGCTCAACCAGTAACAGCCTCACGTTCATCGAGTCG
TCTTTCGATATCCCGAACCGAGACCCTCGCTCAGTAAAAGTAAGTGTTTT
TTTCGTCGACGACTCCAGGTGCAAAAAATCCTCAAGGACAAGGGGATGTT
TGTCCGGGGACTGACTCACCCAATGGTGGGGGTTGCCGGTGTCGAAAAAG
TCAACTCCAGAATGAAAAGCAAGCAGGTGATCAAACCTCTTACTAAAGCC
TTGTTATGAGGAGAATATTTTTGTCTCTAGGCTCCCTGGCGAGTGTGTTG
GTTCTCCTAATAGCTATGTGTGTCCCTTCAACTTGATTCCCACCATTGCA
ATGATTATCACGGGTTGTTATGGGCGAAGTGTCACCGCGCCGTCTGATGC
AAAACTGAGCTTTTCTACTTATTAGTTAGTACTTCAGTGCATTCGGATGA
CATTTTTGTGAGAATGGTTACCGAGCAAACTCACTTGACTTCCCCTACTG
CGGAAGCCGCTCCGATAGCCACTACACGGCCTTTGGATGGGGATATATAT
ATATGTCGATTTCAATGCCTCAATACTGTTTTACCTACTCCTGCACAACA
CAGCTGTCAACTGTTCGGCGAAAAAGCGTAAGTGGGAGAAGACTCGTCGG
CGCCGCGCGAGGGGTAGCGTCGTCAACAGCCAAAGTATTCGGAGTGGCCT
TGGGAAGGGTAGGGAATGCTGGAGTCTGGGCCACGAACAAAGTTGTTAGA
GCTTCGAAGAGAACAATTCCTGTCGCTCTATTCCGCTTACGCGGGGACAT
TGGAACGGGCTCACGAGGTGAGGGTTGTACATACATCCCTTATATTATTC
TGAAAATGCCCAACACACCAAATCATCTTATTTATGACTGGCTCTACTAG
GAACGTGGTACATTTTAGTTGAAGTCAGAGGAACATCGATGAAGTCACGC
TCACTAATCTCACGTGCTTAAGTGTTACTACGATGTCCCACGACGTGAAC
TTGTAGATGATTGTGCCCCCCGTGGTGGTACTCCCGGCTACGGGTCGTTT
TCAATCCTGCATGAACGTGCGGTGGAAATCATGGCCAAGCTAGGAGCCGT
ACCCGTGACACCCAGGAACATGATGAAGCTCCTCAAGGCCGGCGAGGCTG
TACTGTTGTATCCAGGAGGGGTCAAGGAAGCACTCCACCAAAAGGTCTAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig97:829195..833394-

>mRNA_F-serratus_M_contig97.21039.1 ID=mRNA_F-serratus_M_contig97.21039.1|Name=mRNA_F-serratus_M_contig97.21039.1|organism=Fucus serratus male|type=CDS|length=3246bp|location=Sequence derived from alignment at F-serratus_M_contig97:829195..833394- (Fucus serratus male)
CAGGGTCGGGATCTTCTGTTGTTCATCTCGGAGGCAGATGGAATCGACTT
GGAGTCAAACGCAAACTTCAGGTTCCTTTCGACCTCATTTGACGCGTGGT
ACATGGTCATTGACGACGAAGATCGATCGACCTTCCAGCAGCTCACCGAT
CGGCAGGGTCGGGATCTTCTGTTGTTCATCTCGGAGGCAGATGGAATCGA
CTTGGAGTCAAACGCAAACTTCAGGTTCCTTTCGACCTCATTTGACGCGT
GGTACATGGTCATTGACGACGAAGATCGATCGACCTTCCAGCAGCTCACC
GATCGGGTGGCAAAGTTCTTACAAACCTTGGGAGTGAGTGAAGAGAGGCA
AGCAGTCCTGGTGGGATCATCATTCGGAGGGTTACTTGTCGCAAACCTGG
CTCATCAGGTGGCAAAGTTCTTACAAACCTTGGGAGTGAGTGAAGAGAGG
CAAGCAGTCCTGGTGGGATCATCATTCGGAGGGTTACTTGTCGCAAACCT
GGCTCATCAGCATGAAGCGTGGATAAAAGGACTCGTCCTGGTGAATCCTG
CCACATCCTACGCTAGGTCCGCCTGGCGCATCATCGCTTCTTTCGTCGCA
AACGCCCCAGGGCCTAAGGCATTCAGAATGACCGTGGCGCTTGCGCTAGC
CATTGGATTGCCTGCTGCTGCTATGCATGAAGCGTGGATAAAAGGACTCG
TCCTGGTGAATCCTGCCACATCCTACGCTAGGTCCGCCTGGCGCATCATC
GCTTCTTTCGTCGCAAACGCCCCAGGGCCTAAGGCATTCAGAATGACCGT
GGCGCTTGCGCTAGCCATTGGATTGCCTGCTGCTGCTATGATGTCAGAGT
ATACGCGAGAGTTTGAGGCTCTTCCACCCCAGGAAGTTCCCGCATGGCTG
ATGGACCTGACTCAAGAGTGGTTGGGTCATTCCTCAAGACTCTTTGGCGG
AGGGTCGCAGATGTCAGAGTATACGCGAGAGTTTGAGGCTCTTCCACCCC
AGGAAGTTCCCGCATGGCTGATGGACCTGACTCAAGAGTGGTTGGGTCAT
TCCTCAAGACTCTTTGGCGGAGGGTCGCAGGAACAAGTCCGGTGGCGACT
AAAACACTGGATGGAATCAGGAAGTAATCAGGTGGACTCCTTTCTCCAAG
ACATCAAGCTGCCCGTTCTCGTCATTGCTGGGAGTGAGGACAACATGTTT
CCTTCGGTCGAAGAGGCCGCCCGGCTTAGTAGACTGATACCCACGTGTCA
ACAGGAACAAGTCCGGTGGCGACTAAAACACTGGATGGAATCAGGAAGTA
ATCAGGTGGACTCCTTTCTCCAAGACATCAAGCTGCCCGTTCTCGTCATT
GCTGGGAGTGAGGACAACATGTTTCCTTCGGTCGAAGAGGCCGCCCGGCT
TAGTAGACTGATACCCACGTGTCAACAGGTCGTACTGAGTGGAGTTGGGC
ACGCTGCGCTGCACAGCCGCTGTGAGGCTAACTTAGGCGCTTTAATCAAA
TTCTCAATTATTTACGATCGGGACTTGTTGGATCAAGTGATGGATCAAGT
CGCACAAAGCAAGAAGGCAAAAAAAATTCCCAAACGATGGCAGCAGCAGA
AGGTCGTACTGAGTGGAGTTGGGCACGCTGCGCTGCACAGCCGCTGTGAG
GCTAACTTAGGCGCTTTAATCAAATTCTCAATTATTTACGATCGGGACTT
GTTGGATCAAGTGATGGATCAAGTCGCACAAAGCAAGAAGGCAAAAAAAA
TTCCCAAACGATGGCAGCAGCAGAAGATGAGACTTCCCGAGACGTTGAAA
ACAATCGGCGCTGACCCAGTACTAGACTTCAATCTAGATATGGACGACGA
CGTCGTGAAGCTCGTGTGGACAGGCACCAATATGAGACTTCCCGAGACGT
TGAAAACAATCGGCGCTGACCCAGTACTAGACTTCAATCTAGATATGGAC
GACGACGTCGTGAAGCTCGTGTGGACAGGCACCAATATGATGAATCGATT
CACGAGCCCAGTGTTTCTGTCGGTGAATGACCGTGGGGAGGTGAAAGAGG
GCTTAGGAGGCGTTCCAGATTATGAGGAAGGACGGTCGATTTTGTTCGTT
GGGAACCACCAACTATTGGGAATAGACACGCCGATTCTGATGATGAATCG
ATTCACGAGCCCAGTGTTTCTGTCGGTGAATGACCGTGGGGAGGTGAAAG
AGGGCTTAGGAGGCGTTCCAGATTATGAGGAAGGACGGTCGATTTTGTTC
GTTGGGAACCACCAACTATTGGGAATAGACACGCCGATTCTGGTGCAAAA
AATCCTCAAGGACAAGGGGATGTTTGTCCGGGGACTGACTCACCCAATGG
TGGGGGTTGCCGGTGTCGAAAAAGTGCAAAAAATCCTCAAGGACAAGGGG
ATGTTTGTCCGGGGACTGACTCACCCAATGGTGGGGGTTGCCGGTGTCGA
AAAACTGTCAACTGTTCGGCGAAAAAGCGTAAGTGGGAGAAGACTCGTCG
GCGCCGCGCGAGGGGTAGCGTCGTCAACAGCCAAAGTATTCGGAGTGGCC
TTGGGAAGGGTAGGGAATGCTGGAGTCTGGGCCACGAACAAAGTTGTTAG
AGCTTCGAAGAGAACAATTCCTCTGTCAACTGTTCGGCGAAAAAGCGTAA
GTGGGAGAAGACTCGTCGGCGCCGCGCGAGGGGTAGCGTCGTCAACAGCC
AAAGTATTCGGAGTGGCCTTGGGAAGGGTAGGGAATGCTGGAGTCTGGGC
CACGAACAAAGTTGTTAGAGCTTCGAAGAGAACAATTCCTTGTTACTACG
ATGTCCCACGACGTGAACTTGTAGATGATTGTGCCCCCCGTGGTGGTACT
CCCGGCTACGGGTCGTTTTCAATCCTGCATGAACGTGCGGTGGAAATCAT
GGCCAAGCTAGGAGCCGTACCCGTGACACCCAGGAACATGATGAAGCTCC
TCAAGGCCGGCGAGGCTGTACTGTTGTATCCAGGAGGGGTCAAGGAAGCA
CTCCACCAAAAGGTCTATTGTTACTACGATGTCCCACGACGTGAACTTGT
AGATGATTGTGCCCCCCGTGGTGGTACTCCCGGCTACGGGTCGTTTTCAA
TCCTGCATGAACGTGCGGTGGAAATCATGGCCAAGCTAGGAGCCGTACCC
GTGACACCCAGGAACATGATGAAGCTCCTCAAGGCCGGCGAGGCTGTACT
GTTGTATCCAGGAGGGGTCAAGGAAGCACTCCACCAAAAGGTCTAT
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