mRNA_F-serratus_M_contig97.21035.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5KWZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ9_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.130e-34 Identity = 94/273 (34.43%), Postives = 143/273 (52.38%), Query Frame = 1 Query: 472 YIRWSLTLLQRACAHRSISKMS--------TEKRKEVLVDALRA--QDNAMKRPSPF--FEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAE-STPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETY 1251 Y W ++LLQ A R + S T + E LV A+R+ + A P +E+ + P+ E + P+ L+ R+A++ GV+ P K+ DW+ ++ ++ +L + +ED+ + A +T RKS HCVPR EL+ ER+R+ A S+ QL+R ELD KETG KR+V E+W+ KD +V I+PN V QPD +++KF M +++ KDY + N +KSGSHDEW+SFC S Y Sbjct: 102 YSTWPVSLLQIAIQARGETPASKPLTASPETVEVPEALVMAVRSAIRSGASINPKKMMDWEENAYLASRVLEEEXPLTASPETVEVPEDLVLAVRSAIRSGVSIDPKKMMDWEENAYLASGVLEVMADEDSASGAGVTTADRRKSKHCVPRAVELMVAERFRERLAA--SRTQLSRTELDNKETGSKRSVYFELWKDFKDTDVE---------------IDPNTVHQPDISYDKFMNMAKEINKDYGDCHHNMKKSGSHDEWYSFCLSKAGLY 357
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5KAY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.020e-29 Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 766 DWQGQSFTSAALLTAIKEEDAEADAESTPSAR-KSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSI 1242 DW ++ ++ +L I +ED + A +T + R KS HCVPR EL+ ER+R+ A S+ QL+R ELD KETG KR+V E+W+ KD +V + + A I+PN V PD +++KF M+++V KDY + N +KSGSHDEW+SFC + Sbjct: 3 DWDENAYLASRVLEVIADEDRASGAGATTAGRRKSKHCVPRAVELMVAERFRERLAA--SRTQLSRTELDNKETGSKRSVYFELWKDFKDTDVEY-----ERVPAXAAQIDPNRVHPPDISYDKFMNMVKEVNKDYGDCYHNMKKSGSHDEWYSFCRGKV 155
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: D7G0J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J4_ECTSI) HSP 1 Score: 125 bits (315), Expect = 5.340e-28 Identity = 84/288 (29.17%), Postives = 138/288 (47.92%), Query Frame = 1 Query: 472 YIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKE-EDAEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRE 1332 Y +W +LL+ AC+ R I EK + + L D M+R SPF DL V GGTP + P+A +E + P++L+ +AA+ +G + KL + G+S+ +AA+L AI+ +D E E + RKS HCVPRFCE++A + + QL++ ELD K T K R+ +V +WE KD V L H++ + + P + T +R S++TYY+G + +P +++ + ++P+ + E Sbjct: 118 YHKWPASLLREACSLRKIMGFCREKDSGKMANRLEQLDVVMERNSPFLADLDDKVAGGTPASQPLASAKETEEIPEELMIATKAAVGMGASFKKRKLLAYNGRSYPAAAVLAAIEAAKDGEGGDEDIGARRKSKHCVPRFCEVVAMN----LELWFGHRRQLSKAELDNKLTSKTRSAMVRLWEQFKDDKV----ELKMPKHLM-IQARTSSTRPPSTHDHPALTALRHTP------------------------GSLDTYYYGLMCEKYPGIEQASSQMLPEGMETE 372
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5KQ81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ81_9PHAE) HSP 1 Score: 112 bits (280), Expect = 5.840e-26 Identity = 60/148 (40.54%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 631 IVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAESTPSA---RKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLAD 1065 ++ GT + P A EA + PQ LI RAA+ G + P K++D +S+T+AA++ A+KEED + A+++ S RKS HCVPRFCEL+ +++R+ + S+ QL+R+ELD K+TG R++ +E+WEA KD + + S++D Sbjct: 1 MLSDGTATSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFC--ESRTQLSRRELDAKQTGTNRDIHLELWEAFKDESFEMRYSVSD 146
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JY80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY80_9PHAE) HSP 1 Score: 113 bits (283), Expect = 7.060e-24 Identity = 72/197 (36.55%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 643 GTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKE-EDAEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFC 1230 GTP + P A +E+ + P++LI ++A+ +G + KL G+S+ +AA+L AI+E ++AE E + RKS HCVPRFCE++A + + QL++ EL K TGK R +VE+WE KD V V S +P+ TF+KF TM ++ KD + N KSG H+E +SFC Sbjct: 4 GTPASQPPASAKESEKIPEELILATKSAVDMGASFEKRKLLPCNGRSYPAAAVLAAIEELKNAEGGVEDIGARRKSKHCVPRFCEMVAMN----LDKWFRHRTQLSKAELHNKLTGKTRPAMVELWEEFKDRKVLVRYSACRS--------------KPNITFDKFTTMKNEIIKDLGDMYVNVNKSGHHEEMYSFC 182
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5K9L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L9_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.380e-23 Identity = 66/184 (35.87%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 631 IVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAE-STPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKK-RNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNE 1176 ++ G TP + P+ E + P+ L+ R A+ G + P K+ DW+ ++ + +L I ED + A+ +T RKS +CVP EL+ ER+R+ A S+ QL+R ELD KETG RNVV L D HI A I+PN V QPD +++KF M+++V KDY + Sbjct: 26 VLPGETPVSKPLTASPETVEVPEALVLAVRTAIGSGASINPKKMMDWEENAYLAGRVLEVIAVEDRASGADVTTAGRRKSKYCVPLAVELMVAERFRERLAA--SRTQLSRTELDNKETGTSGRNVVTH---------------LKDHEHITAAQIDPNIVHQPDISYDKFMNMVKEVNKDYRD 192
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5K5L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L8_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.210e-22 Identity = 70/195 (35.90%), Postives = 99/195 (50.77%), Query Frame = 1 Query: 466 REYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTV 1047 + Y +WS LL+ ACA R+++ S + + L D M R SP+ DL GGTP + P A EA + PQ LI RAA++ G++ P K++D G+S+T AA++ AIKEED A+ E RKS HC L+++ELD K+ G R++ +EIWEA KD V Sbjct: 69 KSYNKWSAYLLREACALRTLTGNSRSNDTDKMAAGLTQLD-IMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSKHC-------------------------LSKKELDAKQKGTTRDIHLEIWEAFKDEKFNV 237
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5KIT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT8_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 3.100e-19 Identity = 69/211 (32.70%), Postives = 112/211 (53.08%), Query Frame = 1 Query: 436 HRAAARKAHGREYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALK-VGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEAD----------AESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDP 1035 H A+A+KA G++Y + L+R CAHR I +MS +K K+VLV ALR+ D MKRPSP+F+DL AI G + EE G P + ++R + V + + +G ++S A L E+D + + + + RK HC+ R ++ ++ R + INS++Q+TRQELD G ++++ E+ + +DP Sbjct: 178 HHASAKKARGKDYPHSATHFLKRTCAHRQIPRMS-QKSKDVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEGGEEEGAIPANALLMFRGVVNTVALARDRTEPFTVEGVDYSSVADLFDAMEKDDKLELTGGICRREFVDGCITERKDPHCMMRLVGILCEDFIRPL--VINSRLQVTRQELDTSAVGPRKHLWTEVTDRFRDP 385
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JPE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE9_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 3.390e-15 Identity = 65/248 (26.21%), Postives = 102/248 (41.13%), Query Frame = 1 Query: 646 TPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIK------------------------------------------------EEDAEADAE-STPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSI 1242 TP + P+ E + P+ L+ R A+ G + P K+ DW+ ++ ++ +L I +ED A+ +T RKS HCVPR EL+ ER+R+ S+ QL KR+V E+W+ KD V I+PN V QPD +++KF M+++V +D + N +KSGS +EW+SFC + Sbjct: 103 TPASKPLTASPETVEVPEALVLAVRTAIGSGASINPKKMMDWEENAYLASRVLEVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRTPRADVTTAGRRKSKHCVPRAVELMIAERFRERLTA--SRTQLXXXXXXXXXXXXKRSVYFELWKDFKDTEVE---------------IDPNIVHQPDISYDKFMNMLKEVNRDDGDCHHNMKKSGSREEWYSFCRGKV 333
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JXV3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV3_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.940e-12 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 436 HRAAARKAHGREYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDG 642 H A+A+KA GR+Y W+ L+R CAHR I +MS +K K LV ALR+ D MKRPSP+F+DL AIV G Sbjct: 35 HHASAKKALGRDYPHWATHFLKRTCAHRKIPRMS-QKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAG 102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21035.1 >prot_F-serratus_M_contig97.21035.1 ID=prot_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=polypeptide|length=309bp MADGRERLGPAGLSSVSRRQRERRYDRNQQLQRAKVMRALTAAAVVMVCVback to top mRNA from alignment at F-serratus_M_contig97:756808..765149+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig97.21035.1 ID=mRNA_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=mRNA|length=8342bp|location=Sequence derived from alignment at F-serratus_M_contig97:756808..765149+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig97:756808..765149+ >mRNA_F-serratus_M_contig97.21035.1 ID=mRNA_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig97:756808..765149+ (Fucus serratus male)back to top |