mRNA_F-serratus_M_contig97.21033.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig97.21033.1
Unique NamemRNA_F-serratus_M_contig97.21033.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Match: A0A484DSB6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSB6_BRELC)

HSP 1 Score: 375 bits (963), Expect = 1.180e-120
Identity = 193/398 (48.49%), Postives = 253/398 (63.57%), Query Frame = 3 
Query:  435 ASDSKSPEFLAKSPLGRVPVLETPKGCIFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFCAHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYLVGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMAVVGTVELAKEEMTVEGAPAVPTKGKKEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDVEEPPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSNN-SYEDSMKQFWEIFDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIRKWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIATPVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK 1625
            A D KS  F+AK+PLG+VP+LET +GCIFES AIARYVAR+R DT LYG +FFES Q+D+WIDF A E+E+P  +W +P+IG   +N  A+AKAK D+K AL  +E  LL +TYLVG+++TLADI VASALVYP K ++  E+RK F  VTRWF+T VNQP+F AVVG V L    +T EG  +     KK+                               +   E+ P  KK  +PLA+L++D  S  + DAWK  YSN  +  D+M  FWE  D EG+SLW C Y YN+ENS++FMT N VGGF+QRS  +RK+ FG M + G EG E++++G WL RG S + + +AN DA +Y W K    ++D  K  V   WC+E  +EGRP+   KVFK
Sbjct:    2 AKDIKSKAFMAKTPLGKVPLLETEEGCIFESGAIARYVARLRPDTGLYGKTFFESGQVDAWIDFSAFEMEVPLEVWVHPIIGVGKFNAAALAKAKADVKKALQIIENHLLLRTYLVGEQVTLADIVVASALVYPFKFILDKEFRKPFSAVTRWFSTVVNQPEFQAVVGDVPLIDVALTAEGDNSNTKAVKKD----------------------ASKKEKKENATPKEDTPKPKKVEHPLAILNRDNPSLMNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNNENSKMFMTCNAVGGFLQRSEGMRKYAFGVMDVCGAEGSEIVITGCWLFRGDSEKHMIEANPDAEYYTWTK--AELNDATKARVAAYWCNEDELEGRPIADSKVFK 375
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BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Match: B7FUD3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUD3_PHATC)

HSP 1 Score: 376 bits (966), Expect = 1.260e-120
Identity = 210/438 (47.95%), Postives = 271/438 (61.87%), Query Frame = 3 
Query:  333 TAKLWTNPANFRAFKALIAAEYNSVEIEVPEFNHASDSKSPEFLAKSPLGRVPVLETPKGC-IFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFCAHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYLVGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMAVVGTVELAKEEMTVEGAPAVPTKGKKEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDVEE--PPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSN-NSYEDSMKQFWEIFDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIRKWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIA---TPVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK 1625
            T KL    A+FRAF  LIAAEYN V+I+V     A+        +KSP+G++P+LE P G  IF S+++AR+VA +RRD+ L G +  E A ID+W+D+   +LELPA +WFYPV GYMP+N++A  KAK DL  AL  L++ LL+KTYLV  +ITLADI VAS L+YP KLV    Y K +  V RWF TCVNQP+F  VVG V + K+E+   G     TK     XXXXX                           DV    P P  K  +P  ++DK+A S FS DAWKK YSN +SY+ +M+ FWE FD EGW+LW+  Y YN +N R+FM++N VGGF QR+ EIRKW FG M + G E   L + G WL+RG +++ +  ANDDANWY W K+A    P +DE KT V   WCSE  +EG+P+   KVFK
Sbjct:    3 TYKLHAPEASFRAFSTLIAAEYNGVKIDVSTDLGAA--------SKSPVGKLPLLELPDGSTIFSSHSMARFVAGIRRDSGLTGNTLNEQAAIDAWMDWAGQDLELPACVWFYPVAGYMPFNQSAYEKAKADLGNALAVLDQHLLDKTYLVNHQITLADIVVASTLLYPFKLVADKGYLKPYGNVVRWFQTCVNQPEFQQVVGQVAMCKKELAAAGQE---TKXXXXXXXXXXEKKP---------------------KEDVAALAPAPAPKTEHPYKIMDKEAPSGFSMDAWKKTYSNASSYDAAMQTFWETFDAEGWALWLQVYNYNEDNKRIFMSANAVGGFQQRTDEIRKWAFGVMDVLGTEETVLEIKGIWLLRGDTVEHMVSANDDANWYTWTKLAGKGLPPTDEVKTQVAAYWCSEDELEGKPIQDSKVFK 408
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BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Match: H3G8J1_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8J1_PHYRM)

HSP 1 Score: 366 bits (940), Expect = 2.900e-117
Identity = 200/398 (50.25%), Postives = 257/398 (64.57%), Query Frame = 3 
Query:  435 ASDSKSPEFLAKSPLGRVPVLETPKGCIFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFCAHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYLVGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMAVVGTVELAKEEMTVEGAPAVPTKGKKEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDVEEPPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSNN-SYEDSMKQFWEIFDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIRKWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIATPVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK 1625
            A D KS  F AK+P G+VP+LET +GCIFES AIARYVAR+R+DT LYG +FFES Q+DSWIDF A+ELE+P  +W +P++G   +N  A+ KAK D+K AL +LE  L  +TYLVG++ITLADI VASALVYP K V+  E+RK +  V RWF+T VNQP+F AVVG V L    +T EG  +     KK+    XXXXXXXXXX                           KK  +PLAVL+++  +  + DAWK  YSN  +  D+M  FWE  D EG+SLW C Y YN EN+++FMT N VGGF+QRS  +RK+ FG M + G EG E+I++G WL RG S + + +AN DA +Y W K    +SDE K  V   WC+E  +EG+P+   KVFK
Sbjct:    2 AKDLKSAAFKAKTPAGKVPILETDEGCIFESGAIARYVARLRQDTNLYGKTFFESGQVDSWIDFSANELEVPLEVWVHPILGVSAFNAAALTKAKADVKKALQSLENHLHLRTYLVGEQITLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEGDNSGKKATKKDASKKXXXXXXXXXXKP-------------------------KKVEHPLAVLNREKPASMNLDAWKVQYSNTKNLADAMTWFWEHLDKEGYSLWFCDYNYNKENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEGSEIIITGCWLFRGDSEKHMIEANPDAEYYTWTK--AELSDETKARVAAYWCNEDELEGKPIADSKVFK 372
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BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Match: A0A485LSR7_9STRA (Aste57867_24963 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSR7_9STRA)

HSP 1 Score: 367 bits (943), Expect = 4.580e-117
Identity = 203/433 (46.88%), Postives = 264/433 (60.97%), Query Frame = 3 
Query:  339 KLWTNPANFRAFKALIAAEYNSVEIEVPE-FNHASDSKSPEFLAKSPLGRVPVLETPKGCIFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFCAHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYLVGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMAVVGTVELAKEEMTVEGAPA--VPTKGKKEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDVEEPPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSNNS-YEDSMKQFWEIFDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIRKWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIATPVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK 1625
            KL+      RAFK LIAAEYN V++ +PE F    D+KS EFL  +PLG+VPVL+TP+G IFESNAIARYVAR+R DT L G +F+ES Q+D W DF  +ELE+P     YP+ GY  ++     KA EDLK  L  LE  LL +TY VG++ITLADI V  AL+YP K  +  ++RK +  + RWF T   QP+F AVVG V L       +GA A   P K    P    XXXXXXXX                    DVE+ P EKKA +PLAVL++ + S    D WK  YSN      +M+  WE +D EG+SLW C+Y YN EN ++FMT N V GF+QRS  +RK+ FG M + G+EG  + + GAW+ RGQS++ + +AN DA +Y W K+   + D  K  + E WCSE  ++G+ +  GKVFK
Sbjct:    5 KLYVPQGGSRAFKILIAAEYNGVDLNIPENFQMGVDNKSAEFLKLNPLGKVPVLQTPEGPIFESNAIARYVARIRSDTNLLGKTFYESGQVDQWADFVVNELEVPLAAIMYPIFGYRAFDSEIEKKAFEDLKKTLQVLENHLLLRTYFVGEQITLADIAVFGALIYPFKFALDKDFRKPYSNLIRWFQTVAAQPEFAAVVGDVPLCDNATLADGATAKEAPKKAAATPKAPKXXXXXXXX-------------------EDVEDAPVEKKAEHPLAVLNRTSPSKLKFDDWKVCYSNTKPLSKAMEWLWENYDAEGYSLWFCKYNYNDENKKMFMTCNAVSGFLQRSEAMRKFAFGVMSVIGEEGGLIEIVGAWMFRGQSVEHMIEANPDAEYYTWTKVEN-LDDATKARIEEYWCSEDKLDGKTIADGKVFK 417
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BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Match: A0A5A8CRJ1_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRJ1_CAFRO)

HSP 1 Score: 365 bits (937), Expect = 7.560e-116
Identity = 218/439 (49.66%), Postives = 276/439 (62.87%), Query Frame = 3 
Query:  342 LWTNPANFRAFKALIAAEYNSVEIEVPEFNHASDSKSPEFLAKSPLGRVPVLETPKGCIFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFCAHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYLVGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMAVVGTVELAKEEMTVEGAP-AVPTKGKKEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDVEEPPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSNNSYEDS---------MKQFWEI-FDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIRKWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIATPVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK 1625
            L++   +FRA K LIAAE+N V+I  PEF   +D+ +PEFLAK+PLG+VPV++TP+G +FES+AIARYVAR+RRD++L G SFFES Q+D+W+DFC+H++E+P+++  +P+ GY PY +    +A  DL  AL A+EK LL  TY VG+ ITLADI + SAL YPM +V+  E R SFPCVTRWFTTCV +PQF A +G   L  E M  EGA  A   KG    XXXXXXXXXXXXXX           XXXX           KK    L        S  + D +K+ YSN   +           M +FW   FD EG+S+W C YKYN EN   FMTSNLVGGF+QR+ E+RK  FG M I  +E     ++G W+IRGQSIQPL D N DA +YDW K+  P S+ED+T V   WC      G  V   K+FK
Sbjct:   10 LYSYEGDFRALKVLIAAEFNGVDIATPEFKVGTDNVTPEFLAKNPLGKVPVMDTPEGSLFESSAIARYVARLRRDSDLCGRSFFESGQVDAWVDFCSHQVEVPSSLIVFPIFGYTPYKKQIDMQAWTDLTAALAAMEKHLLHHTYFVGESITLADIALVSALFYPMTMVLDAEARASFPCVTRWFTTCVGKPQFAARLGETTLCVERMLAEGASKAAAAKGGXXXXXXXXXXXXXXXXXAAAKADAKPAAXXXXXXXXXXXXXXAKKWHEELPP------SSMNMDDFKRFYSNAPTDPESGDRDFFAVMPEFWASKFDKEGYSIWFCEYKYNDENKVSFMTSNLVGGFVQRADEVRKVAFGNMLILNEEAP-FRIAGCWMIRGQSIQPLLDCNPDAEYYDWTKV-DPASEEDRTKVGAFWCCYEDFLGIKVQDAKMFK 440
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A484DSB6_BRELC1.180e-12048.49Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
B7FUD3_PHATC1.260e-12047.95Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
H3G8J1_PHYRM2.900e-11750.25Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A485LSR7_9STRA4.580e-11746.88Aste57867_24963 protein n=1 Tax=Aphanomyces stella... [more]
A0A5A8CRJ1_CAFRO7.560e-11649.66Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:741617..747405 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score709.1
Seed ortholog evalue1.2e-201
Seed eggNOG ortholog2880.D7G6C4
Preferred nameEEF1G
KEGG rclassRC00055,RC00523
KEGG koko:K01872,ko:K01873,ko:K03233,ko:K15439
KEGG ReactionR03038,R03665
KEGG Pathwayko00970,ko05134,map00970,map05134
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0001047,GO:0001067,GO:0002181,GO:0002182,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003723,GO:0003746,GO:0003824,GO:0004364,GO:0004812,GO:0004832,GO:0005085,GO:0005488,GO:0005507,GO:0005509,GO:0005515,GO:0005543,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005829,GO:0005840,GO:0005853,GO:0005886,GO:0005911,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006399,GO:0006412,GO:0006414,GO:0006417,GO:0006418,GO:0006438,GO:0006449,GO:0006518,GO:0006520,GO:0006575,GO:0006725,GO:0006749,GO:0006790,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009059,GO:0009506,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016070,GO:0016740,GO:0016765,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0022613,GO:0030054,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0034660,GO:0035770,GO:0036464,GO:0042221,GO:0042254,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043244,GO:0043436,GO:0043603,GO:0043604,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051128,GO:0051171,GO:0051173,GO:0051186,GO:0051246,GO:0051252,GO:0051254,GO:0051704,GO:0051707,GO:0055044,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.translation elongation factor activity
EggNOG OGsCOG0625@1,KOG0867@2759,KOG1627@1,KOG1627@2759
Ec32 ortholog descriptioneukaryotic elongation factor-1 B gamma
Ec32 orthologEc-10_001330.1
EC6.1.1.7,6.1.1.9
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016,ko03019
Exons9
Model size2202
Cds size1299
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932750.1091747-UTR-F-serratus_M_contig97:741616..7419451622932750.1091747-UTR-F-serratus_M_contig97:741616..741945Fucus serratus maleUTRF-serratus_M_contig97 741617..741945 +
1690964455.5580332-UTR-F-serratus_M_contig97:741616..7419451690964455.5580332-UTR-F-serratus_M_contig97:741616..741945Fucus serratus maleUTRF-serratus_M_contig97 741617..741945 +
1622932750.2967432-UTR-F-serratus_M_contig97:746831..7474051622932750.2967432-UTR-F-serratus_M_contig97:746831..747405Fucus serratus maleUTRF-serratus_M_contig97 746832..747405 +
1690964455.6751254-UTR-F-serratus_M_contig97:746831..7474051690964455.6751254-UTR-F-serratus_M_contig97:746831..747405Fucus serratus maleUTRF-serratus_M_contig97 746832..747405 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932750.1257203-CDS-F-serratus_M_contig97:741945..7419541622932750.1257203-CDS-F-serratus_M_contig97:741945..741954Fucus serratus maleCDSF-serratus_M_contig97 741946..741954 +
1690964455.5728116-CDS-F-serratus_M_contig97:741945..7419541690964455.5728116-CDS-F-serratus_M_contig97:741945..741954Fucus serratus maleCDSF-serratus_M_contig97 741946..741954 +
1622932750.1426294-CDS-F-serratus_M_contig97:742263..7424341622932750.1426294-CDS-F-serratus_M_contig97:742263..742434Fucus serratus maleCDSF-serratus_M_contig97 742264..742434 +
1690964455.583746-CDS-F-serratus_M_contig97:742263..7424341690964455.583746-CDS-F-serratus_M_contig97:742263..742434Fucus serratus maleCDSF-serratus_M_contig97 742264..742434 +
1622932750.1613398-CDS-F-serratus_M_contig97:742771..7428671622932750.1613398-CDS-F-serratus_M_contig97:742771..742867Fucus serratus maleCDSF-serratus_M_contig97 742772..742867 +
1690964455.5969892-CDS-F-serratus_M_contig97:742771..7428671690964455.5969892-CDS-F-serratus_M_contig97:742771..742867Fucus serratus maleCDSF-serratus_M_contig97 742772..742867 +
1622932750.1878047-CDS-F-serratus_M_contig97:744918..7450921622932750.1878047-CDS-F-serratus_M_contig97:744918..745092Fucus serratus maleCDSF-serratus_M_contig97 744919..745092 +
1690964455.6114368-CDS-F-serratus_M_contig97:744918..7450921690964455.6114368-CDS-F-serratus_M_contig97:744918..745092Fucus serratus maleCDSF-serratus_M_contig97 744919..745092 +
1622932750.2040286-CDS-F-serratus_M_contig97:745362..7455871622932750.2040286-CDS-F-serratus_M_contig97:745362..745587Fucus serratus maleCDSF-serratus_M_contig97 745363..745587 +
1690964455.6202202-CDS-F-serratus_M_contig97:745362..7455871690964455.6202202-CDS-F-serratus_M_contig97:745362..745587Fucus serratus maleCDSF-serratus_M_contig97 745363..745587 +
1622932750.2222614-CDS-F-serratus_M_contig97:745780..7459841622932750.2222614-CDS-F-serratus_M_contig97:745780..745984Fucus serratus maleCDSF-serratus_M_contig97 745781..745984 +
1690964455.6293085-CDS-F-serratus_M_contig97:745780..7459841690964455.6293085-CDS-F-serratus_M_contig97:745780..745984Fucus serratus maleCDSF-serratus_M_contig97 745781..745984 +
1622932750.2409716-CDS-F-serratus_M_contig97:746146..7463311622932750.2409716-CDS-F-serratus_M_contig97:746146..746331Fucus serratus maleCDSF-serratus_M_contig97 746147..746331 +
1690964455.6394777-CDS-F-serratus_M_contig97:746146..7463311690964455.6394777-CDS-F-serratus_M_contig97:746146..746331Fucus serratus maleCDSF-serratus_M_contig97 746147..746331 +
1622932750.2608325-CDS-F-serratus_M_contig97:746453..7465641622932750.2608325-CDS-F-serratus_M_contig97:746453..746564Fucus serratus maleCDSF-serratus_M_contig97 746454..746564 +
1690964455.650967-CDS-F-serratus_M_contig97:746453..7465641690964455.650967-CDS-F-serratus_M_contig97:746453..746564Fucus serratus maleCDSF-serratus_M_contig97 746454..746564 +
1622932750.2802613-CDS-F-serratus_M_contig97:746707..7468311622932750.2802613-CDS-F-serratus_M_contig97:746707..746831Fucus serratus maleCDSF-serratus_M_contig97 746708..746831 +
1690964455.6642134-CDS-F-serratus_M_contig97:746707..7468311690964455.6642134-CDS-F-serratus_M_contig97:746707..746831Fucus serratus maleCDSF-serratus_M_contig97 746708..746831 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21033.1prot_F-serratus_M_contig97.21033.1Fucus serratus malepolypeptideF-serratus_M_contig97 741946..746831 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig97.21033.1

>prot_F-serratus_M_contig97.21033.1 ID=prot_F-serratus_M_contig97.21033.1|Name=mRNA_F-serratus_M_contig97.21033.1|organism=Fucus serratus male|type=polypeptide|length=433bp
MTAKLWTNPANFRAFKALIAAEYNSVEIEVPEFNHASDSKSPEFLAKSPL
GRVPVLETPKGCIFESNAIARYVARMRRDTELYGVSFFESAQIDSWIDFC
AHELELPATIWFYPVIGYMPYNETAVAKAKEDLKIALGALEKTLLEKTYL
VGDKITLADITVASALVYPMKLVMGPEYRKSFPCVTRWFTTCVNQPQFMA
VVGTVELAKEEMTVEGAPAVPTKGKKEPKKDKKEGKKEKKDKKEGKKDKK
EKKKEEDGSRDVEEPPPEKKAPNPLAVLDKDAKSPFSGDAWKKIYSNNSY
EDSMKQFWEIFDPEGWSLWICRYKYNSENSRLFMTSNLVGGFIQRSGEIR
KWLFGCMQITGKEGEELIVSGAWLIRGQSIQPLKDANDDANWYDWVKIAT
PVSDEDKTLVTEMWCSETTVEGRPVLGGKVFK*
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mRNA from alignment at F-serratus_M_contig97:741617..747405+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig97.21033.1 ID=mRNA_F-serratus_M_contig97.21033.1|Name=mRNA_F-serratus_M_contig97.21033.1|organism=Fucus serratus male|type=mRNA|length=5789bp|location=Sequence derived from alignment at F-serratus_M_contig97:741617..747405+ (Fucus serratus male)
GGCCAACAGGACGTTAAGTTGGTTTGTACGTATTCACGCAAGGAGCTAGA
AGAGCACAGTCGCAAGCAGCAGCTTCGACCTTTGATTTCTCTGGAGATTT
CTTAAAATTTCAGCCGCGAGGTTCCAAGATCGCGCTCACCTTTCTGTCAG
TTAGGGAGACACCTGGACAACACGACAGCAGGAAGCATGCATCATGATTT
TTGATTTTGTGTCATTCCCGGTTCCCCGGAAGTTAAGAACGCCCGTCTCT
ACAAAAACGCCTCAAGTTATACTGCCAACTTGTGTGGCTCAGAGCCGGCA
ACCTCACTCTTCCAAACACCTCCATCACGATGACTGCTGTGAGTGACGAA
CACGCTGAATGCATATTGCTTACAAATACGAGGAATATTTTTAATTGACT
GACGTCACTTTCAAGTTCTGCCCGGTACACGTGGTCGTGTATTAATTGGG
ATGACAAACTGTGCTCGGTGCTTGACTAGCTCTACCGCTGCCCCACGCGT
GAATACCGAATACCCAGCTAAATGATTCTCGTTACAAAGCATCTTGAGTT
TCTCGTTCATCAAACGCAAACCCTTGCGTAGCAGACCCCGCGCGTTCGTT
GTTCATGCTCTTGTGCAATAATACCGTCGCTCTTTATTTTGAAGCAGAAG
CTTTGGACGAACCCGGCCAACTTTCGAGCTTTCAAGGCCCTGATCGCTGC
GGAGTACAACAGCGTAGAAATTGAGGTCCCCGAGTTTAACCACGCCAGCG
ACAGCAAATCCCCCGAGTTTTTGGCCAAGTCCCCACTCGGACGCGTTCCC
GTTCTAGAGACACCCAAGGTGATGAGGGCATCAGTCGTTCTGTTTCACGT
GTAAAGCAATTTTTCCGGCTCATCGAAGAATCTACTCGGTACTTCATTCC
CAGTAGTCCTGGGATATACTGTATATAATATACCAGGTATCTACTAACCT
GTACTGGTACGGACAGACCTCAAGCTCAGTACAAATACATGTGGCGTACA
GAGACCATTTCGTTTCGTAATGTTCCTGTACAAGCACTGTACTCCGTCCC
TATGTACATACAAGTACAGTATTCCTCTATATTTATCGATACAACCAGGT
GTACATTTACTCCACTTACACGTCCAACTTCTTCCTCCTTTTCCTCCTCG
CGCAGGGCTGCATTTTCGAGTCCAATGCAATCGCACGTTACGTCGCGCGC
ATGCGGCGGGACACAGAACTGTATGGCGTATCTTTTTTCGAGTCGGCACA
GGTGAGCCTAGTGTTTTTTGAAGAAAATACAGAACGCACCTAGACCTTCT
GAGCAATATCTTCACCAACCTGCTGTTTTTATTTGTAGATCGTGACCAGC
TATATAATCATTTGTTCGTTGTCTGGCCTGTTGGGAAAAGCATTTCTTCC
GAAACTGGGACCGATTGTTAAAAAAATATTTCTGACCGCACTAAAATTAT
TTCTTCTGAGCTGTATAGCACTAAAATCTGGCCATCATTCTGAAATCCAA
GAGTCAGGTTTCATTTTTTTTTTCCGGGCGCCAGCCGCTAGAATTTGGGT
CCCATATATATATGTATATGAGAGTCTTTCAACCCTTGACAATTGACACC
CTTTCCATCACACGGTGTACAGAGTAGTTGAGTTGAATACAGAGTAGTTG
AGTTGAAAGTATCAAATGTATGTGTATTTTAAAGAAGAATCAGAACGCGC
CTATACCTTCTGAGCATCCCCTTGTCAGGAGGAAAACAATGTCAAAACGT
TTTGGTGGGATCAATGGCTGCAAATACAAAACCTCATGTTATTACTCATA
GAGTAAAAGTATGGATCAACCGAGCATGGTAGCCAATTCTGCTTGTGGTC
AGCTGAATAGAGATAATGAATATTTCCCTGTCTGCGTTCGCGGCAGAGAA
ATTGGTCTCGCGAGACCGGTTCGGCAGTCCCGTCCGTCCCGCGCCAGCCT
GCTCATCTCCATACTCAGGCAGAATTTGGTGCTTACTCACGGGATTGTTC
CCGAGTCAAGCGGCGGCGTCCATTAGTTATATAAAACCGCCATGCGCCAT
CGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTT
CACTGCCGAGAGTCCGACGGCACAGGGCCAGTAAACCTTAAGGTAGTTAC
CATCGAGTGCTGCCTTGGCAGGTCACCATTGACCAAATAACATGCCAATG
TATGGTCACACATATTATAGCAAGAGTATGGATCAACCGGGTAAGGTTGC
CAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATACCCACGCCG
CTTTCGTGCCTGAAAATTTGGTCTCGCGAAACGGTTTCGGCAGTCCCGTT
CCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGCATCTGGTGCTTACTT
TGGGGATTCCTCCCGAGTTCCGCAGCCGCGTCTATATAATTTTTTCAATC
CGCTATACGCCATTTTAACGGGTCACGCAACTGCGTACCGATGGCGTTCA
CTGCCGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGA
ACGAGTGCTGCCTTGGCAGGTCATTATGGGCGAAATAATATATATCAACA
AGTAATGCCTCAGTAACAGGGCGTAGTCTTTCGACAGCACGCGTGGAGGC
TAAAGAAAAAATTGGTGCGGAAATCTTGAAGGCGTTCGAAGTACTGCCTC
ATATGAACAGAAAGGCAAAAATAGGTGGGCCACACTTGATTAATATGTTG
TATTGGGTTGAACACAACTGCGCCACCGGGCGCTACAGTATTAAGCGCTA
CCCATTTCTTTCTCTCCATAGACTACAGTATTATCCGGTTCTCTGAAATC
CGAGGTCGGTAGAAAGGCTCCCAAACACGAGAAATTTTGAATGTACCATA
ACTATTACCAGTAGGTAATAGTCTTGACACCTAAACCGCTTCTCACTCTG
GTTGTCATCCAAACGCGATTTCCTCTCCATTTTTGTTGCAAGATTTTTGC
TTTGTAATGCTGTAGTTGAAGCCATTTTCTTCTGTTGACCGCGTGTGGAG
CTCGTTTCAACCCTGGTATCATACGTTCGAGATCAGCCGCCGCGGGCAGT
TTTGTTGGGTCTAAACTGAGGATATAAAAAATATAAAACATTTGTACCCT
TGCACGAGTTACTACACCCTTTGAATTGTGAGTAAAGTCGAACGATACGT
ATAATGTGATATAATTGACAAAAAGCTTACAGTTCTTGTTGATTTTAGCG
TAGACATATTTGACAGATAATCGTGCTTGTTTGGTTACTGTCGCCCCTTC
AGATAGATTCTTGGATCGATTTCTGCGCACACGAGCTTGAGCTCCCAGCC
ACGATCTGGTTCTACCCGGTTATCGGTTATATGCCGTACAACGAGACGGC
AGTTGCGAAGGCGAAAGAAGACCTGAAAATCGCGCTTGGAGCGCTCGAGA
AGACCTTACTCGAGAAAACTTACTTGGTAAGTACTGAGCGATCACACTGT
CGAAGGTATACTCCTTTTGGTGATGTAGATGATTTTGGAAGCGTTATAGT
CTAATGGGTCCATGTACACAGATAGTTGTTTGCTTTTCCCCCTCTTAACT
ACCTTTTCCACGCGTACATTATGTTTTTTTAATCGTTATAACGGCTCCAA
GAGCACAGATATTTGTTGGTCTATCCTCCTCTAATTACCTTTTCCACCCT
ATACATGGTTATCTCTCCTTCCCCCTGTAATGGCTCGCTTTCGAAGGTGG
GTGATAAGATCACCCTCGCTGACATCACGGTGGCCTCAGCCCTTGTGTAC
CCAATGAAGCTGGTCATGGGCCCGGAATACCGCAAGTCGTTCCCATGCGT
GACACGTTGGTTCACCACTTGCGTGAACCAGCCTCAGTTCATGGCTGTTG
TCGGAACCGTCGAGTTGGCGAAAGAGGAGATGACTGTGGAAGGAGCCCCT
GCAGTACCGACAAAGGGGAAGGTGCGACTGGGGTGCACTTGTGATTTCGA
AGTTCGTCGAGGGTAATTCGAGCTACTCCGGGTCATAAGAGGGTTCCCTC
CCTCGACAATAAGATCAGTATATATGGAGTGGGAGTGACAATTTTTATTA
TTTATGAAAATCTCTGGTATCACCCGCGCTATGATTTGAACGGCCTACTG
CTCATGTACTCCAGAAGGAGCCAAAGAAAGACAAGAAGGAAGGAAAGAAG
GAAAAGAAAGACAAGAAGGAAGGAAAGAAAGACAAAAAGGAAAAGAAGAA
AGAGGAGGACGGTTCCAGAGACGTTGAAGAGCCGCCTCCGGAAAAAAAGG
CCCCGAACCCACTTGCTGTTCTGGACAAGGACGCGAAGTCTCCGTTCTCG
GGCGATGCGTGGAAGAAGGTGACACGGTCTTGAGGCATGCAAGTCATGGT
TTGGGATGTAGACGTTCGTTATTATTCTTAGCGCAAAGCGAACGCATTGA
GCTAGTAATAGTAGGCGCAAGTAACGTGACATTAAGTGGTGACAGCTGCT
GCGACCGTCGCGCGAAATGCTACGGAGCAGATCTACTCCAACAACTCCTA
TGAGGACAGCATGAAGCAATTCTGGGAAATCTTCGACCCCGAGGGGTGGT
CGCTCTGGATCTGTCGTTACAAGTACAATTCGGAGAACTCCCGCTTGTTC
ATGACATCGAACTTGGTTGGAGGATTCATTCAACGCTCCGGCGAAATCAG
GAAGTGGCTCTTCGGGTGAGTGGGAGTCCTGAGAGTCATGAATTGGAAAC
TTGTCTTGTGAAGCTTGGGCGCTCGGCTAACTTGTACCGTACCTTCACGG
GTACCACCACTTGATCGATTGCTTTTCCCCCGTATAGGTGCATGCAAATC
ACGGGCAAGGAAGGGGAAGAGTTGATCGTGTCGGGAGCGTGGCTTATCAG
GGGGCAAAGCATTCAGCCCCTCAAGGACGCCAACGACGACGCCAACTGGT
GAGACAGTTCTAACCGTTGAAAAACGGGGTACGTGACGAAAATCTCTAGT
GCCATCGATACTCCACGACGTGAGTAATTAAACTATGCCTATAATAGAAT
CTAACGGTAATTCCCCCCCTCTTTAACGCCTCTTATGTCAGGTATGACTG
GGTCAAGATCGCCACCCCCGTGTCAGATGAGGACAAGACTCTAGTGACTG
AAATGTGGTGTTCGGAAACGACCGTGGAAGGAAGACCCGTCCTGGGTGGA
AAGGTCTTCAAGTAGATGATGGGACAGTTTGGATCATAGCGAACACGGCA
ACACTTGTAATTGTTTTGGTCTTGTTTGAGTAGCTTGCGCCTACACGGTA
ATCTGAAAGGTTTTGTGCCAAAATAATTTGGAGTTGGGTTGTTGGTGTTT
CTCACATTCAGCGTTTTGGTTGTCAACCCGGAAAAAACTACTAGCCACGG
TGGCCAATCCGTCTCGTGGTCTGCTAAACAGGGAAAAATAAAAAATAAAA
ATCCGGCAGTGCACCTACATGCCTAGGCGCTACGCAGGTCTTGGTCCGTC
TCGCGTCCGTACAAAAAATCATTTTACGCTTCCATGCCAGTGCTGCCGGT
AATGGCCTGACAAGTATTATGGAAAACCAAATATTTATCCCTCGCGCAGG
TTATCAGACTGCTTCCACGCAGAACGAATGCCCCGAGTTGCATCTGTGCT
CCGAGTTTGCGTCTGTGCTCCGAGTTTCGTGACTCGAGGTGGTTTCTGTG
TCCTGATATAAAAGATAGTATCAACGGCAAAAGTTCATGAATAAAAAAAC
GCGGCGAGATCAGTGCGGGACCCGACCTCGTGTAAATAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig97:741617..747405+

>mRNA_F-serratus_M_contig97.21033.1 ID=mRNA_F-serratus_M_contig97.21033.1|Name=mRNA_F-serratus_M_contig97.21033.1|organism=Fucus serratus male|type=CDS|length=2598bp|location=Sequence derived from alignment at F-serratus_M_contig97:741617..747405+ (Fucus serratus male)
ATGACTGCTATGACTGCTAAGCTTTGGACGAACCCGGCCAACTTTCGAGC
TTTCAAGGCCCTGATCGCTGCGGAGTACAACAGCGTAGAAATTGAGGTCC
CCGAGTTTAACCACGCCAGCGACAGCAAATCCCCCGAGTTTTTGGCCAAG
TCCCCACTCGGACGCGTTCCCGTTCTAGAGACACCCAAGAAGCTTTGGAC
GAACCCGGCCAACTTTCGAGCTTTCAAGGCCCTGATCGCTGCGGAGTACA
ACAGCGTAGAAATTGAGGTCCCCGAGTTTAACCACGCCAGCGACAGCAAA
TCCCCCGAGTTTTTGGCCAAGTCCCCACTCGGACGCGTTCCCGTTCTAGA
GACACCCAAGGGCTGCATTTTCGAGTCCAATGCAATCGCACGTTACGTCG
CGCGCATGCGGCGGGACACAGAACTGTATGGCGTATCTTTTTTCGAGTCG
GCACAGGGCTGCATTTTCGAGTCCAATGCAATCGCACGTTACGTCGCGCG
CATGCGGCGGGACACAGAACTGTATGGCGTATCTTTTTTCGAGTCGGCAC
AGATAGATTCTTGGATCGATTTCTGCGCACACGAGCTTGAGCTCCCAGCC
ACGATCTGGTTCTACCCGGTTATCGGTTATATGCCGTACAACGAGACGGC
AGTTGCGAAGGCGAAAGAAGACCTGAAAATCGCGCTTGGAGCGCTCGAGA
AGACCTTACTCGAGAAAACTTACTTGATAGATTCTTGGATCGATTTCTGC
GCACACGAGCTTGAGCTCCCAGCCACGATCTGGTTCTACCCGGTTATCGG
TTATATGCCGTACAACGAGACGGCAGTTGCGAAGGCGAAAGAAGACCTGA
AAATCGCGCTTGGAGCGCTCGAGAAGACCTTACTCGAGAAAACTTACTTG
GTGGGTGATAAGATCACCCTCGCTGACATCACGGTGGCCTCAGCCCTTGT
GTACCCAATGAAGCTGGTCATGGGCCCGGAATACCGCAAGTCGTTCCCAT
GCGTGACACGTTGGTTCACCACTTGCGTGAACCAGCCTCAGTTCATGGCT
GTTGTCGGAACCGTCGAGTTGGCGAAAGAGGAGATGACTGTGGAAGGAGC
CCCTGCAGTACCGACAAAGGGGAAGGTGGGTGATAAGATCACCCTCGCTG
ACATCACGGTGGCCTCAGCCCTTGTGTACCCAATGAAGCTGGTCATGGGC
CCGGAATACCGCAAGTCGTTCCCATGCGTGACACGTTGGTTCACCACTTG
CGTGAACCAGCCTCAGTTCATGGCTGTTGTCGGAACCGTCGAGTTGGCGA
AAGAGGAGATGACTGTGGAAGGAGCCCCTGCAGTACCGACAAAGGGGAAG
AAGGAGCCAAAGAAAGACAAGAAGGAAGGAAAGAAGGAAAAGAAAGACAA
GAAGGAAGGAAAGAAAGACAAAAAGGAAAAGAAGAAAGAGGAGGACGGTT
CCAGAGACGTTGAAGAGCCGCCTCCGGAAAAAAAGGCCCCGAACCCACTT
GCTGTTCTGGACAAGGACGCGAAGTCTCCGTTCTCGGGCGATGCGTGGAA
GAAGAAGGAGCCAAAGAAAGACAAGAAGGAAGGAAAGAAGGAAAAGAAAG
ACAAGAAGGAAGGAAAGAAAGACAAAAAGGAAAAGAAGAAAGAGGAGGAC
GGTTCCAGAGACGTTGAAGAGCCGCCTCCGGAAAAAAAGGCCCCGAACCC
ACTTGCTGTTCTGGACAAGGACGCGAAGTCTCCGTTCTCGGGCGATGCGT
GGAAGAAGATCTACTCCAACAACTCCTATGAGGACAGCATGAAGCAATTC
TGGGAAATCTTCGACCCCGAGGGGTGGTCGCTCTGGATCTGTCGTTACAA
GTACAATTCGGAGAACTCCCGCTTGTTCATGACATCGAACTTGGTTGGAG
GATTCATTCAACGCTCCGGCGAAATCAGGAAGTGGCTCTTCGGATCTACT
CCAACAACTCCTATGAGGACAGCATGAAGCAATTCTGGGAAATCTTCGAC
CCCGAGGGGTGGTCGCTCTGGATCTGTCGTTACAAGTACAATTCGGAGAA
CTCCCGCTTGTTCATGACATCGAACTTGGTTGGAGGATTCATTCAACGCT
CCGGCGAAATCAGGAAGTGGCTCTTCGGGTGCATGCAAATCACGGGCAAG
GAAGGGGAAGAGTTGATCGTGTCGGGAGCGTGGCTTATCAGGGGGCAAAG
CATTCAGCCCCTCAAGGACGCCAACGACGACGCCAACTGGTGCATGCAAA
TCACGGGCAAGGAAGGGGAAGAGTTGATCGTGTCGGGAGCGTGGCTTATC
AGGGGGCAAAGCATTCAGCCCCTCAAGGACGCCAACGACGACGCCAACTG
GTATGACTGGGTCAAGATCGCCACCCCCGTGTCAGATGAGGACAAGACTC
TAGTGACTGAAATGTGGTGTTCGGAAACGACCGTGGAAGGAAGACCCGTC
CTGGGTGGAAAGGTCTTCAAGTAGGTATGACTGGGTCAAGATCGCCACCC
CCGTGTCAGATGAGGACAAGACTCTAGTGACTGAAATGTGGTGTTCGGAA
ACGACCGTGGAAGGAAGACCCGTCCTGGGTGGAAAGGTCTTCAAGTAG
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