mRNA_F-serratus_M_contig97.21031.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig97.21031.1
Unique NamemRNA_F-serratus_M_contig97.21031.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: D7G6C5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C5_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 2.290e-124
Identity = 303/680 (44.56%), Postives = 390/680 (57.35%), Query Frame = 1 
Query:    7 LQVWDI-AGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGA-GPSGSSSQARRGLPMXXXXXXXXXXXXQMVQPSLTVPYEFSPE---LPSGNVHNKAGVGDAHLAMNLPRSYPTPSLGVEAESFTSLSSDNPAKTLESALQASQ--PQDILDLGSSGKVATLDSSEIASSLPSDAGIQGISSALTAFMPVTPGASVDESQVIDKIIPSCAIFDMQ-MIEQLRAEKVFLSNVVEADKVEIMKSEQELRQTSGEVEALKAELHELRTQFQQQQQGTIKLRARVTEAAVERAALLAEISACKASLDAQQGENAFLLREEAMIDGTRDALKNYSVSIQKAKTSSNLDPPNRRPTEEISTSADQFAEQLHVSPLPINSGVHDLESKVEKEIALEPVMPSQTPPPPPLSKDPMPQHIEDPFAEVVGKQDSDNADSNSSAQSGMQQNE-----EKSQSGFDAFPPVGDGFES--DPFAMNGFGEGFSAGNATGGAGVAVVDDPFSATDDVFTNATAAAGDGFDAFPPSATSQFSMDAFGQ 2001
            +++WDI AGDP  NYLR EDFY AMRLI+MAQASPG PISAERL  E T + P ARMQ +PPPPTG+VS+G+A +G   +  E +   DPYAMS QER KYE +FP YDSD DGF+TG E VDLFSKS LPRE    IW+L+DADGD KLS+ EFC+GMHLIVCVSKKGL  P T P SL  G   A G   + +QA  G                +V+PS  +    SP    +P G   + +    A LA++L       ++G EAE+ T  S   P   LE  + ++Q  P   +    +G   +  +S    S P  AG+Q +S+A +A + VT  AS   SQ       S +I  M+ ++E L+AEK  LS++V+A +     +EQ LR    E+E L+ EL  LR ++Q+QQ  T +LRARV    V+RA LLAEI AC +S+  Q+ ENAFL +     +GT            K K S   +P      +E S+ A + AEQL VSP P        E+K   +   EP+MP++          P P  +EDPFAEVV +Q S +A  +S    G +  E     E+ QSGFDAFP V D FE+  DPFA++G         +  G+G AV D PF+ATD VFTNATAAA DGFDAFP +   QF  DAFGQ
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE----IWQLADADGDSKLSLAEFCIGMHLIVCVSKKGLPCPMTRPPSLLPGTRSASGVVTNPAQAHGGS------LATSVPPSPVVRPSPAMRPPSSPPAVMMPLGTAASNSDAFSA-LAVDLATKDLMSTVGSEAEAKTPASEQGPP-ALEPPMTSTQHQPNTAVSRSPTGTHVSDHTSPEGESSP--AGMQELSAASSALLAVTRDASTAHSQAT--AAQSSSIHSMKKLVEILKAEKESLSSIVKAGRATQTDNEQLLRDMGTELENLRHELDCLRNEYQKQQGETAELRARVARTGVDRATLLAEIKACDSSIRTQKEENAFLRQHVLGENGTL-----------KEKDS---EPTTANGEDEGSSLAGKMAEQLEVSPAPE-------EAKPTTDAPPEPMMPAKXXXXXXHGMVPQPTAVEDPFAEVVEEQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGL--------SANGSGEAVAD-PFTATDAVFTNATAAA-DGFDAFPAADAQQF--DAFGQ 631
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: D7FK23_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK23_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 4.720e-49
Identity = 88/133 (66.17%), Postives = 102/133 (76.69%), Query Frame = 1 
Query:    7 LQVWDI-AGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPRE 402
            +++WDI AGDP  NYLR EDFY AMRLI+MAQASPG PISAERL  E T + P ARMQ +PPPPTG+VS+G+A +G   +  E +   DPYAMS QER KYE +FP YDSD DGF+TG E VDLFSKS LPRE
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE 133
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A835ZIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN7_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.520e-45
Identity = 96/183 (52.46%), Postives = 125/183 (68.31%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAV-SKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGG 555
            QVWDIA   K+N+L   +FY AMRLI+MAQ+  G P++ E+L  EGTV +P AR+QG+ PP  G + S+G+  +G +          DPY M  +E  KY+ LFP YD DGDGF+TG E V LF+KSGL R  L+Q+W+++D+D D +LS  EF V MHLIVC+SKKGL VP  LP SLA+ G
Sbjct:   51 QVWDIADSSKQNFLTRPEFYCAMRLIAMAQS--GAPLTREKLIVEGTVPIPLARLQGVAPPSGGLMYSQGLGPSGPSQ--------DDPYFMLPEELAKYDMLFPSYDPDGDGFVTGAEAVPLFTKSGLDRGVLKQVWDMADSDRDARLSRAEFAVAMHLIVCISKKGLPVPPALPPSLARPG 223
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BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0W8DN66_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN66_PHYNI)

HSP 1 Score: 155 bits (393), Expect = 2.370e-38
Identity = 85/199 (42.71%), Postives = 117/199 (58.79%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGL 603
            +VW IA   +R+ L   +FY AMRLISMAQ   G+ +SA+R  +  T+  P   M+G+PPP    V  +             + +P   YA++  E+ KY+ +F  YD+D DGFL G E V LF  SGL R  LR IW ++D   D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++   G+G S + + +  G 
Sbjct:   35 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSGGSAAKNDSSSGF 231
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: W2ZUS1_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUS1_PHYPR)

HSP 1 Score: 154 bits (389), Expect = 2.280e-35
Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609
            +VW IA   +R+ L   +FY AMRLISMAQ   G+ +SA+R  +  T+  P   M+G+PPP    V  +             + +P   YA++  E+ KY+ +F  YD+D DGFL G E V LF  SGL R  LR IW ++D   D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++   G+G  GS+  A  G  M
Sbjct:   87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 283
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A4D9DB77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB77_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.560e-35
Identity = 79/189 (41.80%), Postives = 115/189 (60.85%), Query Frame = 1 
Query:    1 MVLQVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLP--PPP-----TGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLA 546
            ++  +W +A   +R++L  EDFY A+RLI +AQ   G   + E++++  T  +P+AR   +P  PPP     T    +  A          ++  GD YAMS+++R +Y   F   D +GDGF+ GP+ V+LFS+SGL R  L ++W+L+DAD D +LS  EF V MHLIVC+SK+GL VP  LP SLA
Sbjct:   78 LLKNIWSLADSRQRHFLAREDFYVALRLIGLAQN--GIAPTREKIQETATAPVPYARFSNVPLAPPPLPAPATATPPQDPAXXXXXXXXXSSLE-GDGYAMSSEDRARYLNHFGPCDVNGDGFVDGPQAVELFSRSGLDRSVLGRVWDLADADNDSRLSPGEFAVAMHLIVCISKRGLPVPERLPPSLA 263
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: W2QJ60_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QJ60_PHYPN)

HSP 1 Score: 154 bits (389), Expect = 2.870e-35
Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609
            +VW IA   +R+ L   +FY AMRLISMAQ   G+ +SA+R  +  T+  P   M+G+PPP    V  +             + +P   YA++  E+ KY+ +F  YD+D DGFL G E V LF  SGL R  LR IW ++D   D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++   G+G  GS+  A  G  M
Sbjct:   87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 283
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0W8DPG9_PHYNI (Epidermal growth factor receptor substrate 15 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DPG9_PHYNI)

HSP 1 Score: 154 bits (389), Expect = 4.090e-35
Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609
            +VW IA   +R+ L   +FY AMRLISMAQ   G+ +SA+R  +  T+  P   M+G+PPP    V  +             + +P   YA++  E+ KY+ +F  YD+D DGFL G E V LF  SGL R  LR IW ++D   D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++   G+G  GS+  A  G  M
Sbjct: 1403 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 1599
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A833T268_PHYIN (Cytoskeletal-regulatory complex EF hand n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T268_PHYIN)

HSP 1 Score: 153 bits (387), Expect = 5.060e-35
Identity = 91/213 (42.72%), Postives = 118/213 (55.40%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPP------PTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKG--GDGAGPSGSSSQ-----ARRGLPM 609
            +VW IA   +R+ L   +FY AMRLISMAQ   G+ +S +R  +  T+  P   M G+PPP      P   +       G         +P  PYA++  E+ KY  +F  YD+D DGFL GPE V LF  SGL R  LR IW ++D   D KLS+ EF V MHLIVCVSK+GL +P+TLPR L +   G  A   G S+Q     A+ G P+
Sbjct:   87 EVWSIADAQRRSELSRNEFYVAMRLISMAQR--GEQVSVQRFFQMATMQYPLPAMDGVPPPQQQPIQPQAQMHAPQQDFGSVHQQATGSQPTGPYALTTDEKSKYSIVFQQYDTDHDGFLMGPEAVALFQMSGLDRNVLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELGETAFGSSAAVPGHSNQMSAPSAQNGFPV 297
[Close]
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0P1A6M0_PLAHL (Transcription factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M0_PLAHL)

HSP 1 Score: 153 bits (386), Expect = 8.290e-35
Identity = 82/185 (44.32%), Postives = 110/185 (59.46%), Query Frame = 1 
Query:   10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPL-----ENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAK 549
            ++W IA   +R+ L   +FY AMRLISM Q   G+ +S +R  +   ++ P A M G+PPP +       ++      PL     +   P  PYA+SA E+ KY+ +F  YD+D DGF+ G E V LF  SGL R  LR IW ++D   D KLS  EF V MHLIVCVSK+GL +PATLPR L++
Sbjct:  593 EIWSIADAQQRSELSRNEFYVAMRLISMIQR--GEQVSVQRFSQFAAMSYPLAMMDGMPPPSSIQQQPIQSQESHPIEPLCGSMQQQPTPTGPYALSADEKSKYDNIFQQYDTDRDGFIMGSEAVTLFQMSGLDRIVLRNIWSMADITQDSKLSAQEFYVAMHLIVCVSKRGLPMPATLPRELSE 775
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C5_ECTSI2.290e-12444.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FK23_ECTSI4.720e-4966.17EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZIN7_9STRA1.520e-4552.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0W8DN66_PHYNI2.370e-3842.71Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
W2ZUS1_PHYPR2.280e-3543.78Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A4D9DB77_9STRA2.560e-3541.80Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W2QJ60_PHYPN2.870e-3543.78Uncharacterized protein n=9 Tax=Phytophthora paras... [more]
A0A0W8DPG9_PHYNI4.090e-3543.78Epidermal growth factor receptor substrate 15 n=4 ... [more]
A0A833T268_PHYIN5.060e-3542.72Cytoskeletal-regulatory complex EF hand n=1 Tax=Ph... [more]
A0A0P1A6M0_PLAHL8.290e-3544.32Transcription factor n=1 Tax=Plasmopara halstedii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:695191..699569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue2.2e-109
Seed eggNOG ortholog2880.D7G6C5
KEGG koko:K12472
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
EggNOG free text desc.endocytosis
EggNOG OGsKOG0998@1,KOG0998@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons8
Model size2010
Cds size2010
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21031.1prot_F-serratus_M_contig97.21031.1Fucus serratus malepolypeptideF-serratus_M_contig97 695191..699569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932749.842443-CDS-F-serratus_M_contig97:695190..6952891622932749.842443-CDS-F-serratus_M_contig97:695190..695289Fucus serratus maleCDSF-serratus_M_contig97 695191..695289 +
1690964455.4220939-CDS-F-serratus_M_contig97:695190..6952891690964455.4220939-CDS-F-serratus_M_contig97:695190..695289Fucus serratus maleCDSF-serratus_M_contig97 695191..695289 +
1622932749.8591175-CDS-F-serratus_M_contig97:695901..6962041622932749.8591175-CDS-F-serratus_M_contig97:695901..696204Fucus serratus maleCDSF-serratus_M_contig97 695902..696204 +
1690964455.434293-CDS-F-serratus_M_contig97:695901..6962041690964455.434293-CDS-F-serratus_M_contig97:695901..696204Fucus serratus maleCDSF-serratus_M_contig97 695902..696204 +
1622932749.8747907-CDS-F-serratus_M_contig97:696545..6968801622932749.8747907-CDS-F-serratus_M_contig97:696545..696880Fucus serratus maleCDSF-serratus_M_contig97 696546..696880 +
1690964455.443465-CDS-F-serratus_M_contig97:696545..6968801690964455.443465-CDS-F-serratus_M_contig97:696545..696880Fucus serratus maleCDSF-serratus_M_contig97 696546..696880 +
1622932749.8912365-CDS-F-serratus_M_contig97:697141..6974301622932749.8912365-CDS-F-serratus_M_contig97:697141..697430Fucus serratus maleCDSF-serratus_M_contig97 697142..697430 +
1690964455.4535306-CDS-F-serratus_M_contig97:697141..6974301690964455.4535306-CDS-F-serratus_M_contig97:697141..697430Fucus serratus maleCDSF-serratus_M_contig97 697142..697430 +
1622932749.9045541-CDS-F-serratus_M_contig97:697543..6976481622932749.9045541-CDS-F-serratus_M_contig97:697543..697648Fucus serratus maleCDSF-serratus_M_contig97 697544..697648 +
1690964455.4634407-CDS-F-serratus_M_contig97:697543..6976481690964455.4634407-CDS-F-serratus_M_contig97:697543..697648Fucus serratus maleCDSF-serratus_M_contig97 697544..697648 +
1622932749.9183185-CDS-F-serratus_M_contig97:698015..6981111622932749.9183185-CDS-F-serratus_M_contig97:698015..698111Fucus serratus maleCDSF-serratus_M_contig97 698016..698111 +
1690964455.472981-CDS-F-serratus_M_contig97:698015..6981111690964455.472981-CDS-F-serratus_M_contig97:698015..698111Fucus serratus maleCDSF-serratus_M_contig97 698016..698111 +
1622932749.9351468-CDS-F-serratus_M_contig97:698556..6986701622932749.9351468-CDS-F-serratus_M_contig97:698556..698670Fucus serratus maleCDSF-serratus_M_contig97 698557..698670 +
1690964455.4834828-CDS-F-serratus_M_contig97:698556..6986701690964455.4834828-CDS-F-serratus_M_contig97:698556..698670Fucus serratus maleCDSF-serratus_M_contig97 698557..698670 +
1622932749.9547458-CDS-F-serratus_M_contig97:698900..6995691622932749.9547458-CDS-F-serratus_M_contig97:698900..699569Fucus serratus maleCDSF-serratus_M_contig97 698901..699569 +
1690964455.4959934-CDS-F-serratus_M_contig97:698900..6995691690964455.4959934-CDS-F-serratus_M_contig97:698900..699569Fucus serratus maleCDSF-serratus_M_contig97 698901..699569 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig97.21031.1

>prot_F-serratus_M_contig97.21031.1 ID=prot_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=polypeptide|length=670bp
MVLQVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGT
VALPFARMQGLPPPPTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERL
KYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRK
LSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRG
LPMVPVPPSPSPSPSQMVQPSLTVPYEFSPELPSGNVHNKAGVGDAHLAM
NLPRSYPTPSLGVEAESFTSLSSDNPAKTLESALQASQPQDILDLGSSGK
VATLDSSEIASSLPSDAGIQGISSALTAFMPVTPGASVDESQVIDKIIPS
CAIFDMQMIEQLRAEKVFLSNVVEADKVEIMKSEQELRQTSGEVEALKAE
LHELRTQFQQQQQGTIKLRARVTEAAVERAALLAEISACKASLDAQQGEN
AFLLREEAMIDGTRDALKNYSVSIQKAKTSSNLDPPNRRPTEEISTSADQ
FAEQLHVSPLPINSGVHDLESKVEKEIALEPVMPSQTPPPPPLSKDPMPQ
HIEDPFAEVVGKQDSDNADSNSSAQSGMQQNEEKSQSGFDAFPPVGDGFE
SDPFAMNGFGEGFSAGNATGGAGVAVVDDPFSATDDVFTNATAAAGDGFD
AFPPSATSQFSMDAFGQNM*
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mRNA from alignment at F-serratus_M_contig97:695191..699569+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig97.21031.1 ID=mRNA_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=mRNA|length=4379bp|location=Sequence derived from alignment at F-serratus_M_contig97:695191..699569+ (Fucus serratus male)
ATGGTCCTCCAGGTTTGGGACATCGCGGGGGATCCGAAGCGGAACTACCT
TCGTTGTGAAGATTTTTATGCAGCGATGCGGCTCATTTCGATGGCGCAGG
TGAGGTATGCCTTATTGCTCTCAACAAAACGTACTATTAATATTATATAA
TAATTGTTGCCATGTTAAAACATTGGAAGAGCAAAAGTGCGTTGTGATAA
TGCACATTTTTTTTTATACTAGGTACGCCTGATTAATTATTTTGTGTCGT
CGCCCCGGTAGCTCAGAGGCAACCTCGTAACCTTACCTTCTGACAAGTTG
GGACGTGAGTTCGATCCCGGCAACGGTATTTTCCTCACTGAAAAACTAAA
AACTAAAAAAAAATGCTCAACTAGTGGAGAACGATTAAATCGTTAGTACA
CTAAATTGGACTTCACGGTCGACGAGGGAAAGGAATGGCTAAATCCTTCT
CGCGATAAAAATTAAGGCACGCACCGCAGAAAGAATGTGGATGAGAAATC
CTGTGTGACCCCGGCTGGTACGTCGAACGAACTTGATATCCAGAATGAAT
GGGAAGAAAACACACACACACACACATATTCTTGTCGGGTGCTATTTTTA
TATTTTTTATGCTGTAAATCTTTTCGCGTGCTAAGTTCATCCGCTGTGAC
TGGAGAAACGTCTGAATTATTGCTTCACTTCACTTCATTTCCGGTCATTC
CAACGTTTCAGGCTTCCCCTGGCAAACCGATCTCAGCGGAGCGCCTGAAG
AAGGAGGGAACGGTTGCTCTTCCGTTCGCAAGGATGCAGGGTCTTCCTCC
TCCGCCAACAGGAGCTGTCTCAAAGGGGATTGCACGCACTGGTGATAATG
CGATTCCTCTTGAAAACGTGCGACCTGGTGACCCGTACGCCATGTCTGCT
CAGGAGAGGTTGAAATACGAGAGGCTGTTCCCTGTCTATGACTCGGATGG
AGACGGCTTTCTGACTGGACCTGAAACTGTTGATCTTTTCTCGAAGTCTG
GTCTTCCACGAGAGGTAATTTTTAGTTGGTACACGCGCTTATTTGAGTGT
AACTAATGTGACCGATGTCTCGGATGTACTAAATACCCCGTATCATGTAG
AGTATGTAGAGTGTAGAGTACAAACATATTTGGCAGGAGAAAGCAACAAG
TTCAAGTTGGTGTGGTGTGTGTGCCCTGTGATAAAGTAACAACCTGTGCT
TCACCAGCCCCACGTATTGAATTGAAGAGCACATACGCGTTCACCCTTCG
AGGGTACCGAGGCGATATTATTTTTTTGCTGATGACTGCCCCGACGTTTC
CTCTTTTCTTGCTAATCGTATTAATTCGAACACTGCCTATCCCGCGTTTT
CCCAGCATTTGCGACAAATCTGGGAGTTATCAGACGCTGACGGCGACAGG
AAGCTTTCTATGCCGGAGTTCTGTGTGGGGATGCATCTTATAGTGTGCGT
GAGCAAAAAGGGTCTGGGAGTGCCTGCCACTCTACCGCGTAGCCTTGCCA
AAGGCGGCGATGGGGCAGGCCCGTCTGGAAGTTCTTCACAAGCGCGGCGT
GGGTTACCTATGGTACCCGTCCCTCCATCTCCATCTCCATCTCCATCTCA
GATGGTACAGCCATCGCTCACTGTGCCGTACGAATTTTCCCCCGAGCTTC
CTTCCGGAAATGTACATAATAAGGCGGGTGTGGGAGACGCGTTCAGGCGA
GTGATTTCCTGGATGGTGAAGAGAATCCAAGAATGCATCGCCATACTTTG
TGACGGCAAGCTATGAACTATGATATATTGTATGTGGACTCAACGACTCC
TCGCGCGGACCAATCAGCATCGGTATTTCCGTAGCCGTAATGCTTTTGTC
GCAACAGGCAGATGTTATCTTGTCATATTGGTAATGTGCGATACTTTCTT
GCCATCCCGCTTATTTGAAAGTGGCTCGGCCATCGTGGGACCCATTCGCA
GTCACCTGGCGATGAATCTTCCAAGAAGTTATCCGACTCCTTCTCTCGGT
GTCGAAGCGGAGTCTTTCACTTCATTATCTTCTGACAACCCTGCGAAAAC
GCTGGAGAGTGCTCTGCAAGCTTCGCAGCCCCAAGACATACTTGACCTGG
GTTCCTCTGGTAAGGTCGCCACACTCGACTCAAGTGAAATCGCATCCTCT
CTACCCAGCGATGCAGGAATTCAGGGCATATCGAGCGCTTTGACCGCCTT
CATGCCAGTTACCCCTGGGGCATCGGTGGACGAGAGTCAGGTGTGTCCCT
TTGGGCAATAACTTTTACTTGAAGCAACCCACAGTTGGAGAGCTTGGCTA
TTCCCGCCACGTGACTGTTGTGCACATCGTACATGCTTCTGTCGACTCCC
GAGGTTATTGACAAAATAATCCCATCTTGTGCTATTTTTGACATGCAGAT
GATTGAGCAGCTTCGAGCGGAGAAGGTATTCCTTAGCAATGTTGTGGAAG
CTGACAAGGTAAGATAGGTTCAGCTGTCGCAAGGGGCTATCGTTTTTTCA
CGCAATCCCACCTCCGATTCCTACATTTGGACACGATGGAGCCCGCCCCG
TACACTATACCCTATATTATATAATATACTACAGAAAAGCTTTGGCTACT
TGCATGTTAATAGGCGTTGAATGCCAGCCGACTTAAGCTCGGTATTTTGT
GCATCCGCACATAAATTGTGTAGAATATGTTGTATAATGTATAAATACCG
TGTAAGTACACTAGAGGAAGTGCCTGTGGGATTTGGCTTCCTTGCTGACG
TGCTGGGTTTTTTTCAAACTTGCCGGCCATGTGTTGAAGTATTAATAAAC
TAATTATTAATAAACTACTCACCAGGTGGAAATTATGAAAAGCGAACAAG
AACTTCGTCAAACGAGCGGCGAGGTTGAAGCGCTCAAGGCAGAGCTTCAT
GAACTCCGAACCCAGTTTCAGGTGAGCTCGAACCGCTGTGGTATTAGGAG
GCCTATACAACCACTGTATTTCTCGTTAGACGTTCTTATGGGCCCCGTAC
AGGACAGAATAGAACAGTCAGCTGCCTGGTAAAGCTTCGATTTAGATCAT
CCGCTACGTATGCGTTTTTTTAGTGCCCACTTGTTTTTTATTTACATTCA
GTGATTGACACTCATTGAAAACAAACATAATTTCATTATTTCATAGTGTG
AGTGATAACTTGTATTGATTGAAGGATTGGGAGGATCGGACTGTTTTGTC
GTCTGTGACGTGACGACGAGTCTTCTTTCTCTCTCTTAGCTCTCTTAGCA
CAGCACCACTTGTATTGAGGTATTGAGGTATTGAACTTAACTCGTCATAT
TTCGAATAACAGTTATGGGGCGGAACTCGTGAAATGTTTGGTTCGAATCG
GCAATGTCGCTCGCAGCAACAGCAACAGGGAACCATCAAACTACGAGCGC
GAGTGACGGAGGCGGCGGTTGAACGGGCGGCTCTCCTGGCGGAAATCAGT
GCGTGTAAAGCTTCGCTTGACGCCCAACAGGTGGGTTTTGGTCTTACCGC
CTGAACCGATGCTGATACCGTGGGGACGATATACGAGAGATGGTAAGATG
GTCGTGCTGTATCTGCTGCATCTCAATATTCAAGGCGACGCTTGATAACA
ACACATCACCCTACTGTGTCGGAAAACGTCCCTATGTATATTGTTTGCAA
CTGTCTCACTCAAATACTTAGCTTTAGGATACTGTTTCTCCCATTTGGCC
TTTTCTGCAGGGAGAAAATGCTTTCCTTCTTCGCGAAGAAGCAATGATCG
ACGGCACACGCGACGCCCTCAAGAACTACAGTGTCTCCATTCAAAAGGCG
AAAACCTCCTCAAACCTGGACCCCCCTAATCGTCGCCCGACGGAGGAAAT
TTCGACCTCTGCAGACCAGTTTGCAGAACAACTGCACGTTTCGCCATTAC
CTATTAATAGTGGCGTTCACGATCTTGAGTCAAAAGTGGAGAAGGAGATT
GCTCTGGAGCCAGTGATGCCATCGCAAACACCCCCCCCTCCTCCACTCTC
CAAGGACCCAATGCCTCAGCATATCGAAGATCCTTTTGCAGAAGTGGTCG
GCAAACAAGACTCCGACAATGCGGATTCAAATTCCTCAGCTCAGTCAGGG
ATGCAACAGAACGAGGAAAAAAGCCAAAGTGGATTCGATGCTTTCCCTCC
GGTTGGTGACGGTTTTGAGTCCGATCCCTTTGCGATGAACGGCTTTGGCG
AAGGCTTTAGTGCCGGGAACGCGACGGGAGGAGCTGGAGTGGCTGTAGTG
GATGACCCGTTTTCGGCGACGGATGATGTCTTCACCAACGCCACGGCGGC
GGCTGGAGACGGATTCGATGCCTTTCCTCCTTCCGCCACATCACAGTTCT
CGATGGATGCATTTGGACAAAATATGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig97:695191..699569+

>mRNA_F-serratus_M_contig97.21031.1 ID=mRNA_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=CDS|length=4020bp|location=Sequence derived from alignment at F-serratus_M_contig97:695191..699569+ (Fucus serratus male)
ATGGTCCTCCAGGTTTGGGACATCGCGGGGGATCCGAAGCGGAACTACCT
TCGTTGTGAAGATTTTTATGCAGCGATGCGGCTCATTTCGATGGCGCAGA
TGGTCCTCCAGGTTTGGGACATCGCGGGGGATCCGAAGCGGAACTACCTT
CGTTGTGAAGATTTTTATGCAGCGATGCGGCTCATTTCGATGGCGCAGGC
TTCCCCTGGCAAACCGATCTCAGCGGAGCGCCTGAAGAAGGAGGGAACGG
TTGCTCTTCCGTTCGCAAGGATGCAGGGTCTTCCTCCTCCGCCAACAGGA
GCTGTCTCAAAGGGGATTGCACGCACTGGTGATAATGCGATTCCTCTTGA
AAACGTGCGACCTGGTGACCCGTACGCCATGTCTGCTCAGGAGAGGTTGA
AATACGAGAGGCTGTTCCCTGTCTATGACTCGGATGGAGACGGCTTTCTG
ACTGGACCTGAAACTGTTGATCTTTTCTCGAAGTCTGGTCTTCCACGAGA
GGCTTCCCCTGGCAAACCGATCTCAGCGGAGCGCCTGAAGAAGGAGGGAA
CGGTTGCTCTTCCGTTCGCAAGGATGCAGGGTCTTCCTCCTCCGCCAACA
GGAGCTGTCTCAAAGGGGATTGCACGCACTGGTGATAATGCGATTCCTCT
TGAAAACGTGCGACCTGGTGACCCGTACGCCATGTCTGCTCAGGAGAGGT
TGAAATACGAGAGGCTGTTCCCTGTCTATGACTCGGATGGAGACGGCTTT
CTGACTGGACCTGAAACTGTTGATCTTTTCTCGAAGTCTGGTCTTCCACG
AGAGCATTTGCGACAAATCTGGGAGTTATCAGACGCTGACGGCGACAGGA
AGCTTTCTATGCCGGAGTTCTGTGTGGGGATGCATCTTATAGTGTGCGTG
AGCAAAAAGGGTCTGGGAGTGCCTGCCACTCTACCGCGTAGCCTTGCCAA
AGGCGGCGATGGGGCAGGCCCGTCTGGAAGTTCTTCACAAGCGCGGCGTG
GGTTACCTATGGTACCCGTCCCTCCATCTCCATCTCCATCTCCATCTCAG
ATGGTACAGCCATCGCTCACTGTGCCGTACGAATTTTCCCCCGAGCTTCC
TTCCGGAAATGTACATAATAAGGCGGGTGTGGGAGACGCCATTTGCGACA
AATCTGGGAGTTATCAGACGCTGACGGCGACAGGAAGCTTTCTATGCCGG
AGTTCTGTGTGGGGATGCATCTTATAGTGTGCGTGAGCAAAAAGGGTCTG
GGAGTGCCTGCCACTCTACCGCGTAGCCTTGCCAAAGGCGGCGATGGGGC
AGGCCCGTCTGGAAGTTCTTCACAAGCGCGGCGTGGGTTACCTATGGTAC
CCGTCCCTCCATCTCCATCTCCATCTCCATCTCAGATGGTACAGCCATCG
CTCACTGTGCCGTACGAATTTTCCCCCGAGCTTCCTTCCGGAAATGTACA
TAATAAGGCGGGTGTGGGAGACGCTCACCTGGCGATGAATCTTCCAAGAA
GTTATCCGACTCCTTCTCTCGGTGTCGAAGCGGAGTCTTTCACTTCATTA
TCTTCTGACAACCCTGCGAAAACGCTGGAGAGTGCTCTGCAAGCTTCGCA
GCCCCAAGACATACTTGACCTGGGTTCCTCTGGTAAGGTCGCCACACTCG
ACTCAAGTGAAATCGCATCCTCTCTACCCAGCGATGCAGGAATTCAGGGC
ATATCGAGCGCTTTGACCGCCTTCATGCCAGTTACCCCTGGGGCATCGGT
GGACGAGAGTCAGTCACCTGGCGATGAATCTTCCAAGAAGTTATCCGACT
CCTTCTCTCGGTGTCGAAGCGGAGTCTTTCACTTCATTATCTTCTGACAA
CCCTGCGAAAACGCTGGAGAGTGCTCTGCAAGCTTCGCAGCCCCAAGACA
TACTTGACCTGGGTTCCTCTGGTAAGGTCGCCACACTCGACTCAAGTGAA
ATCGCATCCTCTCTACCCAGCGATGCAGGAATTCAGGGCATATCGAGCGC
TTTGACCGCCTTCATGCCAGTTACCCCTGGGGCATCGGTGGACGAGAGTC
AGGTTATTGACAAAATAATCCCATCTTGTGCTATTTTTGACATGCAGATG
ATTGAGCAGCTTCGAGCGGAGAAGGTATTCCTTAGCAATGTTGTGGAAGC
TGACAAGGTTATTGACAAAATAATCCCATCTTGTGCTATTTTTGACATGC
AGATGATTGAGCAGCTTCGAGCGGAGAAGGTATTCCTTAGCAATGTTGTG
GAAGCTGACAAGGTGGAAATTATGAAAAGCGAACAAGAACTTCGTCAAAC
GAGCGGCGAGGTTGAAGCGCTCAAGGCAGAGCTTCATGAACTCCGAACCC
AGTTTCAGGTGGAAATTATGAAAAGCGAACAAGAACTTCGTCAAACGAGC
GGCGAGGTTGAAGCGCTCAAGGCAGAGCTTCATGAACTCCGAACCCAGTT
TCAGCAACAGCAACAGGGAACCATCAAACTACGAGCGCGAGTGACGGAGG
CGGCGGTTGAACGGGCGGCTCTCCTGGCGGAAATCAGTGCGTGTAAAGCT
TCGCTTGACGCCCAACAGCAACAGCAACAGGGAACCATCAAACTACGAGC
GCGAGTGACGGAGGCGGCGGTTGAACGGGCGGCTCTCCTGGCGGAAATCA
GTGCGTGTAAAGCTTCGCTTGACGCCCAACAGGGAGAAAATGCTTTCCTT
CTTCGCGAAGAAGCAATGATCGACGGCACACGCGACGCCCTCAAGAACTA
CAGTGTCTCCATTCAAAAGGCGAAAACCTCCTCAAACCTGGACCCCCCTA
ATCGTCGCCCGACGGAGGAAATTTCGACCTCTGCAGACCAGTTTGCAGAA
CAACTGCACGTTTCGCCATTACCTATTAATAGTGGCGTTCACGATCTTGA
GTCAAAAGTGGAGAAGGAGATTGCTCTGGAGCCAGTGATGCCATCGCAAA
CACCCCCCCCTCCTCCACTCTCCAAGGACCCAATGCCTCAGCATATCGAA
GATCCTTTTGCAGAAGTGGTCGGCAAACAAGACTCCGACAATGCGGATTC
AAATTCCTCAGCTCAGTCAGGGATGCAACAGAACGAGGAAAAAAGCCAAA
GTGGATTCGATGCTTTCCCTCCGGTTGGTGACGGTTTTGAGTCCGATCCC
TTTGCGATGAACGGCTTTGGCGAAGGCTTTAGTGCCGGGAACGCGACGGG
AGGAGCTGGAGTGGCTGTAGTGGATGACCCGTTTTCGGCGACGGATGATG
TCTTCACCAACGCCACGGCGGCGGCTGGAGACGGATTCGATGCCTTTCCT
CCTTCCGCCACATCACAGTTCTCGATGGATGCATTTGGACAAAATATGTA
GGGAGAAAATGCTTTCCTTCTTCGCGAAGAAGCAATGATCGACGGCACAC
GCGACGCCCTCAAGAACTACAGTGTCTCCATTCAAAAGGCGAAAACCTCC
TCAAACCTGGACCCCCCTAATCGTCGCCCGACGGAGGAAATTTCGACCTC
TGCAGACCAGTTTGCAGAACAACTGCACGTTTCGCCATTACCTATTAATA
GTGGCGTTCACGATCTTGAGTCAAAAGTGGAGAAGGAGATTGCTCTGGAG
CCAGTGATGCCATCGCAAACACCCCCCCCTCCTCCACTCTCCAAGGACCC
AATGCCTCAGCATATCGAAGATCCTTTTGCAGAAGTGGTCGGCAAACAAG
ACTCCGACAATGCGGATTCAAATTCCTCAGCTCAGTCAGGGATGCAACAG
AACGAGGAAAAAAGCCAAAGTGGATTCGATGCTTTCCCTCCGGTTGGTGA
CGGTTTTGAGTCCGATCCCTTTGCGATGAACGGCTTTGGCGAAGGCTTTA
GTGCCGGGAACGCGACGGGAGGAGCTGGAGTGGCTGTAGTGGATGACCCG
TTTTCGGCGACGGATGATGTCTTCACCAACGCCACGGCGGCGGCTGGAGA
CGGATTCGATGCCTTTCCTCCTTCCGCCACATCACAGTTCTCGATGGATG
CATTTGGACAAAATATGTAG
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