|
Homology
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A8J4PVX8_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVX8_9MYCE) HSP 1 Score: 398 bits (1023), Expect = 3.190e-132 Identity = 192/366 (52.46%), Postives = 268/366 (73.22%), Query Frame = 3
Query: 198 VLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGR-ATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAET---AAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSR 1283
+L+++GS HFRQRV+CS LSGR IRI +IR ++ + GL +EA+FLRL+DK+TNGTK++IN TGTTL F PG + GG+ +HECGTTR + +F+E L+ L F+K P ++TL+GITN+D+DL++D ++ TLP++R+FG+ EEG L + + +RGAPP GGG V F CPIV LK I D G I+RIRG AY T+VSPQ NRV + ++G+L PDV++ +DH G G SPG+ L+LVAE+TTG L AE + EK PE+LG+ + ++EEI NGGC+DS +QSLA+L MVLCPED+S++R+GK+T Y+I Y+R+L DFFG F+++PD + TV+ +C GIGFKN++R
Sbjct: 1 MLKYQGSTHFRQRVICSTLSGRPIRITNIR--------DQDEKPGLRDYEASFLRLIDKITNGTKIDINVTGTTLTFVPGIIIGGKNISHECGTTRGISYFVEALICLGPFAKVPLDVTLNGITNNDIDLTIDTIRTTTLPVIRKFGL-EEG-LNIKIIKRGAPPNGGGSVNFKCPIVPSLKAIQLVDEGKIRRIRGIAYATRVSPQFPNRVLDKAKGVLLEFTPDVYISSDHYRGNESGLSPGYGLTLVAETTTGCCLSAECMGGSGEKNETPEELGERAAISLMEEIYNGGCIDSHNQSLALLFMVLCPEDISKIRLGKITPYTIEYIRNLFDFFGVTFKIEPDQDSKTVVFTCLGIGFKNMAR 356
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A397J989_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J989_9GLOM) HSP 1 Score: 398 bits (1022), Expect = 4.370e-132 Identity = 192/367 (52.32%), Postives = 272/367 (74.11%), Query Frame = 3
Query: 192 SSVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 1292
S VL+F G +FRQR++ SILSG+ I+I+ IR ++ GL E FLRL+DK+TNG+ +EIN TGT++ +KPG + GG+ H+CG +R++G+F+E L+ LA F+K PFNLTL+GITND++D+SVD ++ VTL L RF V EEG LEL + +RG+ P GGG V F CP+++ LKPI + D G IKRIRG A CT+VSPQ ANR+ S+R +LNR +PDV+++TD G G+SPGFA+SLVAESTTG L+ AE AA+ G PED+G+ +K++L EI+ GGC+DS +Q L +L+MVL EDVS++R+G+LT ++I Y+R L++FF F++KPDP T+T+L++C G+G+ N S+ +T
Sbjct: 2 SKVLKFSGHNYFRQRLILSILSGKTIKINKIR--------SDDNNPGLQDFEIGFLRLLDKVTNGSTLEINYTGTSVLYKPGVITGGKINHDCGISRAIGYFLEPLIALAPFAKNPFNLTLTGITNDNIDISVDTIRTVTLLQLGRF-VTEEG-LELKISKRGSAPLGGGEVTFKCPVMKSLKPIQYIDEGRIKRIRGIACCTRVSPQNANRMVNSARSILNRYIPDVYIYTDVYKGEESGKSPGFAISLVAESTTGVLISAEQAAKSGETPEDIGQRTAKILLTEIRKGGCIDSLNQWLILLMMVLSTEDVSKIRLGQLTAFTIQYIRDLKNFFDVTFKIKPDPATNTLLMACVGVGYINYSKKST 358
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A1Y1Z8N6_9FUNG (18S rRNA biogenesis protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8N6_9FUNG) HSP 1 Score: 396 bits (1018), Expect = 1.810e-131 Identity = 191/366 (52.19%), Postives = 267/366 (72.95%), Query Frame = 3
Query: 195 SVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 1292
++++F+G +FRQR+V + LSGR +RI+ IR E+ GL +EA FLRL++K+TNG+ +EIN TGT + +KPG + GG+ H+CGT R +G+F+E L+ LA F K P N L+GIT +++D+SVD ++ VTL L+RFG E+G LEL + +RGAPP GGG V F CPI+R LKP+ F D G IKRIRG AYCT+VSPQ ANR+ +S+R +LNR +PD++++TD G G+SPGFAL+LVAESTTGALL AE AA G PED+GK +K++LEE+ GGC DS Q + +L+MVL PEDVS++RIGK++ ++I YLR L+ FFG F+++PDP T+L++C G G+ N+++ T
Sbjct: 4 TIIKFEGHNYFRQRLVMATLSGRPVRIEKIR--------SEDDNPGLKDYEANFLRLLEKVTNGSHLEINYTGTAVFYKPGIIVGGKIQHDCGTARGVGYFLEALIALAPFGKLPMNALLTGITTNNLDISVDTIRTVTLMQLKRFGF-EDG-LELKINKRGAPPLGGGEVVFKCPIIRALKPLQFIDEGRIKRIRGIAYCTRVSPQTANRLVDSARSVLNRYIPDIYIYTDVFKGAESGKSPGFALTLVAESTTGALLSAELAANPGETPEDIGKKCAKMLLEEVNKGGCFDSVCQWVGLLMMVLGPEDVSKIRIGKISPFTIQYLRDLKSFFGVTFKIRPDPENKTILMACMGTGYVNVNKKTT 359
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A397V8X0_9GLOM (Putative RNA 3'-terminal phosphate cyclase-like protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V8X0_9GLOM) HSP 1 Score: 396 bits (1017), Expect = 2.570e-131 Identity = 194/367 (52.86%), Postives = 266/367 (72.48%), Query Frame = 3
Query: 192 SSVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 1292
+ +L+F G +FRQR+V + LSG+ ++ID IR ++ GL EA FLRL+DK+TNG+ +EIN +GT++ FKPG + GG+ H+CGT R++G+F+E ++ LA FSK PFNLT GITND+VDLS+D ++ L LRRFG+ EEG LEL + +RGAPP GGG V F CPIV+ LKPI FTD G IKRIRG A CT+VSPQ NR+ +++R +LNR +PDV+++TD G G+SPGFALSLVAESTT L+ AE AA G PED+G+ +KL+L EI+ GGC+ S +Q L +L MVL PEDVS++R+G+LT ++I YLR +RDFF F++K D ++T+LL+C G+G+ N ++ T
Sbjct: 3 TKILKFSGHNYFRQRLVLATLSGKTVKIDKIR--------SDDNDPGLKDFEANFLRLLDKVTNGSIIEINYSGTSVLFKPGIITGGKIIHDCGTARAIGYFLEPMIALAPFSKDPFNLTFFGITNDNVDLSMDIIRTAVLLQLRRFGI-EEG-LELKISKRGAPPLGGGEVNFKCPIVKALKPIQFTDEGRIKRIRGIACCTRVSPQNTNRMVDAARSVLNRYIPDVYIYTDVYKGEESGKSPGFALSLVAESTTSVLITAEQAANPGETPEDIGRRTAKLLLSEIRKGGCIGSPNQWLMLLFMVLSPEDVSKIRLGQLTAFTIQYLRDIRDFFDVTFKIKQDAESNTLLLTCVGVGYINYNKKTT 359
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: RCL1_DICDI (Probable RNA 3'-terminal phosphate cyclase-like protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RCL1_DICDI) HSP 1 Score: 396 bits (1018), Expect = 2.730e-131 Identity = 193/378 (51.06%), Postives = 268/378 (70.90%), Query Frame = 3
Query: 198 VLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRA-THECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTL---------------PEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSR 1283
+L+F+GS HFRQR++CS LSG+AIRI +IR E+ + GL +EA+FLRLVDK+TNG+K+EIN TGT + + PG + GG+ THECGT R +G+F+E L+ L F+K P ++TL+GITN+D+DL++D ++ TLP++R+FG+ EEG L + + +RGAPP GGG V F CPIV LK I D G I+RIRG AY T++SPQ +NRV + ++GLL PDV++ +DH G G SPG+ L+LVAE+TTG L AE + G PEDLG+ + +LEEI NGGC+DS +QSLA+L MVLCPED+S++R+GK+T Y+I ++R LRDFFG F+++PD + TVL +C GIG+KN++R
Sbjct: 1 MLKFQGSTHFRQRIICSTLSGKAIRITNIR--------DEDEKPGLRDYEASFLRLVDKITNGSKIEINSTGTQITYIPGIIIGGKGITHECGTVRGIGYFVEALICLGPFAKAPLDITLNGITNNDIDLTIDTIRTTTLPIIRKFGI-EEG-LIIKIIKRGAPPNGGGSVNFKCPIVPHLKAIQLIDEGKIRRIRGIAYATRISPQFSNRVLDKAKGLLLEYTPDVYISSDHYKGNESGLSPGYGLTLVAETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPEDLGERTAFALLEEIFNGGCIDSHNQSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIEPDQNSKTVLFTCLGIGYKNMAR 368
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 689.9 |
Seed ortholog evalue | 7.1e-196 |
Seed eggNOG ortholog | 2880.D7G6A6 |
Preferred name | RCL1 |
KEGG ko | ko:K11108 |
KEGG Pathway | ko03008,map03008 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0030234,GO:0030490,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0098772,GO:0140098,GO:1901360,GO:1990904 |
EggNOG free text desc. | RNA-3'-phosphate cyclase activity |
EggNOG OGs | COG0430@1,KOG3980@2759 |
Ec32 ortholog description | RNA 3'-terminal phosphate cyclase domain |
Ec32 ortholog | Ec-10_001150.1 |
COG Functional cat. | A |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03009 |
Exons | 11 |
Model size | 1672 |
Cds size | 1200 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932748.1507578-UTR-F-serratus_M_contig97:265047..265142 | 1622932748.1507578-UTR-F-serratus_M_contig97:265047..265142 | Fucus serratus male | UTR | F-serratus_M_contig97 265048..265142 + |
1690964454.404633-UTR-F-serratus_M_contig97:265047..265142 | 1690964454.404633-UTR-F-serratus_M_contig97:265047..265142 | Fucus serratus male | UTR | F-serratus_M_contig97 265048..265142 + |
1622932748.373551-UTR-F-serratus_M_contig97:270360..270737 | 1622932748.373551-UTR-F-serratus_M_contig97:270360..270737 | Fucus serratus male | UTR | F-serratus_M_contig97 270361..270737 + |
1690964454.5423472-UTR-F-serratus_M_contig97:270360..270737 | 1690964454.5423472-UTR-F-serratus_M_contig97:270360..270737 | Fucus serratus male | UTR | F-serratus_M_contig97 270361..270737 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932748.1721134-CDS-F-serratus_M_contig97:265142..265282 | 1622932748.1721134-CDS-F-serratus_M_contig97:265142..265282 | Fucus serratus male | CDS | F-serratus_M_contig97 265143..265282 + |
1690964454.4228623-CDS-F-serratus_M_contig97:265142..265282 | 1690964454.4228623-CDS-F-serratus_M_contig97:265142..265282 | Fucus serratus male | CDS | F-serratus_M_contig97 265143..265282 + |
1622932748.192656-CDS-F-serratus_M_contig97:266399..266490 | 1622932748.192656-CDS-F-serratus_M_contig97:266399..266490 | Fucus serratus male | CDS | F-serratus_M_contig97 266400..266490 + |
1690964454.4343739-CDS-F-serratus_M_contig97:266399..266490 | 1690964454.4343739-CDS-F-serratus_M_contig97:266399..266490 | Fucus serratus male | CDS | F-serratus_M_contig97 266400..266490 + |
1622932748.211026-CDS-F-serratus_M_contig97:266986..267052 | 1622932748.211026-CDS-F-serratus_M_contig97:266986..267052 | Fucus serratus male | CDS | F-serratus_M_contig97 266987..267052 + |
1690964454.444621-CDS-F-serratus_M_contig97:266986..267052 | 1690964454.444621-CDS-F-serratus_M_contig97:266986..267052 | Fucus serratus male | CDS | F-serratus_M_contig97 266987..267052 + |
1622932748.224972-CDS-F-serratus_M_contig97:267479..267616 | 1622932748.224972-CDS-F-serratus_M_contig97:267479..267616 | Fucus serratus male | CDS | F-serratus_M_contig97 267480..267616 + |
1690964454.4547825-CDS-F-serratus_M_contig97:267479..267616 | 1690964454.4547825-CDS-F-serratus_M_contig97:267479..267616 | Fucus serratus male | CDS | F-serratus_M_contig97 267480..267616 + |
1622932748.241009-CDS-F-serratus_M_contig97:267822..267958 | 1622932748.241009-CDS-F-serratus_M_contig97:267822..267958 | Fucus serratus male | CDS | F-serratus_M_contig97 267823..267958 + |
1690964454.4667196-CDS-F-serratus_M_contig97:267822..267958 | 1690964454.4667196-CDS-F-serratus_M_contig97:267822..267958 | Fucus serratus male | CDS | F-serratus_M_contig97 267823..267958 + |
1622932748.2533138-CDS-F-serratus_M_contig97:268120..268301 | 1622932748.2533138-CDS-F-serratus_M_contig97:268120..268301 | Fucus serratus male | CDS | F-serratus_M_contig97 268121..268301 + |
1690964454.4786-CDS-F-serratus_M_contig97:268120..268301 | 1690964454.4786-CDS-F-serratus_M_contig97:268120..268301 | Fucus serratus male | CDS | F-serratus_M_contig97 268121..268301 + |
1622932748.2666435-CDS-F-serratus_M_contig97:268500..268649 | 1622932748.2666435-CDS-F-serratus_M_contig97:268500..268649 | Fucus serratus male | CDS | F-serratus_M_contig97 268501..268649 + |
1690964454.4898727-CDS-F-serratus_M_contig97:268500..268649 | 1690964454.4898727-CDS-F-serratus_M_contig97:268500..268649 | Fucus serratus male | CDS | F-serratus_M_contig97 268501..268649 + |
1622932748.282426-CDS-F-serratus_M_contig97:268878..268937 | 1622932748.282426-CDS-F-serratus_M_contig97:268878..268937 | Fucus serratus male | CDS | F-serratus_M_contig97 268879..268937 + |
1690964454.4996715-CDS-F-serratus_M_contig97:268878..268937 | 1690964454.4996715-CDS-F-serratus_M_contig97:268878..268937 | Fucus serratus male | CDS | F-serratus_M_contig97 268879..268937 + |
1622932748.3236375-CDS-F-serratus_M_contig97:269138..269213 | 1622932748.3236375-CDS-F-serratus_M_contig97:269138..269213 | Fucus serratus male | CDS | F-serratus_M_contig97 269139..269213 + |
1690964454.5103974-CDS-F-serratus_M_contig97:269138..269213 | 1690964454.5103974-CDS-F-serratus_M_contig97:269138..269213 | Fucus serratus male | CDS | F-serratus_M_contig97 269139..269213 + |
1622932748.3360684-CDS-F-serratus_M_contig97:269917..270026 | 1622932748.3360684-CDS-F-serratus_M_contig97:269917..270026 | Fucus serratus male | CDS | F-serratus_M_contig97 269918..270026 + |
1690964454.5226593-CDS-F-serratus_M_contig97:269917..270026 | 1690964454.5226593-CDS-F-serratus_M_contig97:269917..270026 | Fucus serratus male | CDS | F-serratus_M_contig97 269918..270026 + |
1622932748.3548117-CDS-F-serratus_M_contig97:270303..270360 | 1622932748.3548117-CDS-F-serratus_M_contig97:270303..270360 | Fucus serratus male | CDS | F-serratus_M_contig97 270304..270360 + |
1690964454.53204-CDS-F-serratus_M_contig97:270303..270360 | 1690964454.53204-CDS-F-serratus_M_contig97:270303..270360 | Fucus serratus male | CDS | F-serratus_M_contig97 270304..270360 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21018.1 >prot_F-serratus_M_contig97.21018.1 ID=prot_F-serratus_M_contig97.21018.1|Name=mRNA_F-serratus_M_contig97.21018.1|organism=Fucus serratus male|type=polypeptide|length=400bp
MTTSKKMIPAVAKTTLASKLKTTNEPNDTITTSSVLRFKGSKHFRQRVVC SILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKV EINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFN LTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGG GGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSR GLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEK GTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIG KLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT* back to topmRNA from alignment at F-serratus_M_contig97:265048..270737+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig97.21018.1 ID=mRNA_F-serratus_M_contig97.21018.1|Name=mRNA_F-serratus_M_contig97.21018.1|organism=Fucus serratus male|type=mRNA|length=5690bp|location=Sequence derived from alignment at F-serratus_M_contig97:265048..270737+ (Fucus serratus male) GATGCACCTGTAGCGGTGGAGGTCGAGTTGGATTACGTTTTACGACAGTT
TCCGTACTTAGCTCCTACTTTACCTACACAAATTTTCCCGGTGCAATGAC
TACATCAAAGAAGATGATTCCCGCTGTGGCAAAAACAACGCTTGCAAGCA
AGTTGAAAACAACTAACGAGCCAAACGATACGATAACGACCTCGTCCGTT
CTTCGCTTCAAAGGCAGCAAGCACTTCCGCCAAAGGTGCGGCTACAAACC
AGTGCAGTTCAGTACTCATAGTCCATATCCGGAAACAAAGAACTTTCGCC
TTGTTTTGAGGAATAACATTTGGTCATGGTTGTAAATACATCAGCTTTCT
TCTTGGCTCAGTCGAGTTGGCTGGTTCGAAGTGGTTTGTAATACTTGTAG
CGTACCCGGGTCCGGCGAGAAAGGTACATTATCTTTCTTTGGAGATGTCG
CTTTTTTCTACTGGTATTTAGTATTTTTGTACCATTGCCGTTTTCTTTGT
ATACAGGTAGGATATAGGAGAGCACTCCACGTCCGTTTTGCCCTTCCGTG
TGGTCTTTTTCTACCTTGTGACCACGGGCTGGATTTTTTACACCAGCTTA
TGTGAGATTTTGATAATTCAATCAACGTGTTTGGTTACCATTAGCTCTTC
GCGTTTTTTGTTTTTTCCAGGCATTGGACTACTTTTTGTTCTCTTTGTGC
TATTATTAGAAAACGCATACTGGTAGCTTGACGAGTTGTGGCTGGACTGA
TTGGCTGGTTGACATTATATACAGGTTTGTTTTTTGTTTTTTTAATGTAT
CTCACTTACCGCCGATGAGCACCTACTGCAACGTTACTACACTGTTAATG
CCTGTGACCAGTAAGGAACCTTCCATCTCTCCCCTGGTCTCGCCTACGAC
TTTTCATCACGATGCAAGTTCAGCAAAGTTCAGCTCGTCAGCTAATGATT
AAATTTTACTTAGACTCACGTTCTCTCGCTTTCCGCCACGGAAGCTAGAA
TAAAAATCCGGATTTAGTTAAGAATCGAATTCGCGCTCGCGGGACCAAAT
TCTCAGGCGCAACGGGGACAGGGAAATATTGATTTTCCCTGTTCAGCTGA
CCACGCAGGATTGGCAACCTTACCCGGTTGATCCAAACTCTGCTATATAT
GATGACCATATATACTATTAATGATTAATATCGATCTACTATTACTATTA
GTGATGTATTAGTACGAGGTTACCACTATCCCACTCGGGCGACGAGCATG
TCATACCGTACCGTCATACCGTACCGCCTCGAGACCTACCAGTAGTTGTC
AAAACCTCGTATTCTTGTCTGCCTAAACCCAAATCCTCCTCGCTATCTCC
AGAGTTGTTTGCTCCATTCTCAGCGGACGAGCCATCCGAATCGATGATAT
CCGACCCTTCCCGACAAGTACGAGTCACCAGGAGGAAGTTCAGGTAAATA
TATGTATTGAAGGGCACTGACTTCGTTGTGACAGTGCGTTGGAATTGCCT
GGCTCGTCAGAAGCGTCAGAAGCGTGAAAAGCGACATTACGAGTCCCTTC
TGTACCAGGTATTTGGCTTTCAAGTGCAGTACAAGGGACAGCTTGAGCTT
TTTCAGTGCATAATTCAGTACATTATTTAGTACATTATAGATTTTCAAGT
GTTAAAAGAGTACCGGGAGAGATGGGACTCGTAACCGTAGACCGCAGACG
CCATGTGCTGCGTAAGGACAACAATGCTGTAATTAGAGCAATCAAACAGC
CGTGATTGAAATTGTAGCACAAGTACTCTGTTATATTGTACTGTAGGCCC
CACGATACTGTTTGGTTACGGCGCTTTATCCCGCCTACTAATGGGTTAGT
TACCTTTGGACTATTTGGTGTCTCCGCGATGTCCCACGATCTTGTTCGCT
CTTGCCCCTGATGCCTTTGGCTCCGATCCTGGTTCTCAGATGGGGCTCAT
GCCCCATGAAGCAGCGTTCTTACGACTGGTCGATAAGCTTACCAACGGAA
CGAAGGTACTTGTAAACTTGAGGAAGCGGTCGATTGCGCCGCCCGCTGTC
TATATGATACTCCAGTATGCCATGTAGCTCTATCTGGTATGTGTACATGA
CTCGACAACAGCTCGAAGGGGTCCTTCGGTGGCTGTCACAACAGAGAGTA
CATATGGGACCTTCAGACATGTAATTTGTCTCACAGCGTAAATGATGAGC
AGGCTGACGCGGGACGGGGCGCGCGGAACCCGTCTCGCGAGACCAAATTC
TCAGACGCTCACGAGGACAGGGAGATATGCATTTCCCCGTTCAACTGACC
ACGAGCAGGGTTGGCAACCTCGCCCGGTTGATCTATACTCTGCTATATGT
GATGCTATACTCTGCTCTATGTGATGAAAATGCATACATACATGTTATGT
TCCCACCCATGGCCTGGTGGTTTCTTCCTCAGGTCGAGATCAACGAGACT
GGAACCACCCTTAAGTTTAAACCAGGGTACGTGGCAGGGGGTCGGGCAAC
CCACGAGTGTGGCACGACTCGTTCCCTAGGCTGGTTTATTGAAGGCCTCC
TTCCGCTCGCTCTGTTCAGGTACACGTTAGCGAAGCCGGTAATATGTAAG
AGTAGAAGTTACAGGGTATTTTATTTTGTTTTTATTTCGTCTGCTGAGCT
TGCACGATGCACGATGCAATGATATATATATATGTCTTGGTGCTTGAATA
TGTTAAAATTGACGGCTCCTTCGCACCGCCCGTGTCGTAATTGATGACCG
GATCTACCGTGTTTTCGTCACGCAGCAAGACGCCGTTCAACCTCACCCTT
TCGGGGATAACCAACGATGACGTGGATCTTTCGGTGGATGCGTTGAAGGC
TGTTACGCTACCGCTTCTGAGGCGATTCGGGGTGGCAGAGGAAGGACGGC
TCGAGTTGACGGTACGCGTTGCTCGTGCCTCGGTGTTAGAAGTCGCGTCA
AGCACCACTTGCTACTTTTGTACGGGTGCTCATGGCCCACCTTCTCGCCT
CGTTGCCGACTTTGGCGAGTAACCCATCCAACACACCGGAACTGATCCAA
TACATCCGAACTTGTATGAATAGGTGAAGCGTCGCGGGGCTCCGCCAGGT
GGGGGGGGGCTCGTGGAATTCACTTGTCCAATCGTCAGGGAGCTGAAGCC
TATCGACTTCACCGACCCAGGGTTGATCAAACGGATTCGCGGCAACGCCT
ATTGCACCAAAGTCTCGCCACAAATTGCTAACCGCGTGGCAGAGTCGTCT
CGAGGTGGGCGCAGAGCTGTTGCCTTGAGCCTTGGTTCTAATCTATTTGA
AGCAAGCAGGTCACAGAGAAGGCGAATCGTACTATTAATAATGTAAGGTA
CTGTATAGCTGTATAGCTGAATGCGTGAAAGCTCCCTGGATAGACGGTCC
ATTTCCATTCACGTGTGCTAACACCTCACACTTCCCTTGCATGGCGGCGG
CAGGACTTTTGAATCGACTACTGCCAGACGTGTGGGTACACACAGATCAC
AACGCGGGGCGAGCGGGAGGGGAATCACCGGGATTTGCTTTGAGCCTCGT
GGCGGAGTCGACTACGGGCGCTCTCTTGGTGGCAGAAACAGCAGCAGAAA
AAGTAAGAGATGGGCTGTTGTTTTGGTACGAAACTATAACATGGACTCTC
GATCGTGTTCTCTGGTATGCCATGCTCTAGAGCTCCTGTCGTGGCCAGTT
GTCAAAAACCGCTTCTCTTTCGGAAAACCGCTCCAAACGATATCATGTCT
CATCTATAAAGATTTTCTTTGTCGCATCGCCTCGCATTGCAACTCTCTCC
CTACGCCTACCGCACTACCGTACGTGTCAAGGGAACACTCCCCGAAGACC
TAGGCAAGCTCGGCAGCAAGCTCATCTTGGAGGAAATCAAGTGAGTATTG
TTAACCCTCCTTGATCACAAAAGTTCACAGTTTTAGTCTCTGCTGGAGTT
CTACCTATTAGAGACTGAGGGAGGAAATTGACACACAGATAATTGAAATC
GAGTATATACTAATAGTCAATCGCTGTCTTCGTTTCTTTCGTATTTTTGA
CTCGTTCCTGTTTCACTTCATCTGGTACCATTTTGCAACAGAAATGGTGG
ATGCGTAGACTCGTCCCACCAAAGCTTGGCGATGTTGCTGATGGTCTTGT
GTCCGGAGGATGTGAGGTGAGGGACTCGGTACTGTATTGTACTGTACTGT
ACTGCACATGGTACGAAGTGCAGTTGGTCGTACACTAATACATGACATGT
TTACTGGGAATGAAATTGTTGGAATGCATGCTTTAGCTATGTACCGTAAA
AAGAGTGGCGAGGATGTGTCTAAAATACTATTAATAGTATGTCTTTGCTA
TGTCTCCAAAATGTTTCCAAAAGCTAAATAACTTTCAGTGGAATCGTCCC
AGGGCTTAATGTCCAAACTTCGTCAGTGCAAAATTAATTACGCCTAGGTA
CCGAGGAGCAAGAATGTGTGAATGTTATGCAGGATATCCTGAAGCTGTAA
TTTTGTACCCGGTGCGCGCACTTTTTCTTGCCCAGTCGTTTGGCCCGTTC
CGTGTGACCCATCCTACCCTACCCTACCCTCATGATAATCGAAACCTCAG
CTGACCATCAAAACCCCATAGCGTGGCTTGGGCGAGGTCATAGTGCACTG
CACTGCCTTACGCGACGGAGCGTGATGAGCCCAAGATTGTTATCTTGACC
AAATATTAATAATGTAATGCAATTCGTCCGACAGTTTTGCCTAGAAATTT
TCGGCAGATCGTACCGTCTTCTTTTCTCGCGCAAATGTTGGGATATATTG
GGATAGACCGACCGTAAGGCTGGTAGTTTAACGAATTTTCTATGGAACGC
TCGCCTCTACCACGTTGCAGCCGCCTCCGCATTGGGAAACTGACTCAGTA
TAGTATCACCTACCTCCGCCACCTACGCGACTTCTTCGGGGCGTACTTTC
GACTCAAGCCGGACCCACTTACATCGACGGTAAGTGCTGACTGATACAGT
GACCGTGCTCAAAGGACAGACAATTTTGGGCAATGCCAAGTgctgtcctg
CACTGCGTGCAGGGGCTGATACAATTTCCAGTCCATGGTTCATGCAGGTC
ACCTGCTTCCATCCCCCCCCCCCCCATCCCCCATTTGTCCCATTATTTAT
CTGTACTCTCTCTATATATATACCTCGCCCTCTTCCCTTTTTGAACATTT
TGCTCCATTTTTCTTCCCTTCTTTCCCTTGCTTTTTTTGTTCCCCGCCGT
CTGAAGGTATTGCTCTCTTGTCAGGGTATTGGCTTCAAGAATTTGTCGAG
AGGAGCAACCTAAAGATAAAGATAACCATGCCGGTGCAATCACGACGTTT
ATGTTCCCCTGGACGTACTTTATGCACTATTTCGAGGGATCGTTTCTCAG
GGAGAGGGAGGGAGAGGAACAAGGAATCAATGGCAGTTTCACGTTTGCGG
GGGACTGATTGATGAGTCTCCCACGAAGTGTGGGGATCGCAGAAAGGATA
TAACTTGAAATGACAATCACCAATGACAAATAGCTTTGACAAATGTAGTC
AAACATGATTGACTGTCACGTCAGACAAGGTAACCAAACTTCCAGGAAAG
TGGAGAATTTACAAGAGGTATTGAGGTACATTCTGCACCTTCCCATGTAG
CTATGATAACAAACTCTCCAATTCTGCCCACTGCGTAGCA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig97:265048..270737+ >mRNA_F-serratus_M_contig97.21018.1 ID=mRNA_F-serratus_M_contig97.21018.1|Name=mRNA_F-serratus_M_contig97.21018.1|organism=Fucus serratus male|type=CDS|length=2400bp|location=Sequence derived from alignment at F-serratus_M_contig97:265048..270737+ (Fucus serratus male) ATGACTACATCAAAGAAGATGATTCCCGCTGTGGCAAAAACAACGCTTGC AAGCAAGTTGAAAACAACTAACGAGCCAAACGATACGATAACGACCTCGT CCGTTCTTCGCTTCAAAGGCAGCAAGCACTTCCGCCAAAGATGACTACAT CAAAGAAGATGATTCCCGCTGTGGCAAAAACAACGCTTGCAAGCAAGTTG AAAACAACTAACGAGCCAAACGATACGATAACGACCTCGTCCGTTCTTCG CTTCAAAGGCAGCAAGCACTTCCGCCAAAGAGTTGTTTGCTCCATTCTCA GCGGACGAGCCATCCGAATCGATGATATCCGACCCTTCCCGACAAGTACG AGTCACCAGGAGGAAGTTCAGAGTTGTTTGCTCCATTCTCAGCGGACGAG CCATCCGAATCGATGATATCCGACCCTTCCCGACAAGTACGAGTCACCAG GAGGAAGTTCAGATGGGGCTCATGCCCCATGAAGCAGCGTTCTTACGACT GGTCGATAAGCTTACCAACGGAACGAAGATGGGGCTCATGCCCCATGAAG CAGCGTTCTTACGACTGGTCGATAAGCTTACCAACGGAACGAAGGTCGAG ATCAACGAGACTGGAACCACCCTTAAGTTTAAACCAGGGTACGTGGCAGG GGGTCGGGCAACCCACGAGTGTGGCACGACTCGTTCCCTAGGCTGGTTTA TTGAAGGCCTCCTTCCGCTCGCTCTGTTCAGGTCGAGATCAACGAGACTG GAACCACCCTTAAGTTTAAACCAGGGTACGTGGCAGGGGGTCGGGCAACC CACGAGTGTGGCACGACTCGTTCCCTAGGCTGGTTTATTGAAGGCCTCCT TCCGCTCGCTCTGTTCAGCAAGACGCCGTTCAACCTCACCCTTTCGGGGA TAACCAACGATGACGTGGATCTTTCGGTGGATGCGTTGAAGGCTGTTACG CTACCGCTTCTGAGGCGATTCGGGGTGGCAGAGGAAGGACGGCTCGAGTT GACGCAAGACGCCGTTCAACCTCACCCTTTCGGGGATAACCAACGATGAC GTGGATCTTTCGGTGGATGCGTTGAAGGCTGTTACGCTACCGCTTCTGAG GCGATTCGGGGTGGCAGAGGAAGGACGGCTCGAGTTGACGGTGAAGCGTC GCGGGGCTCCGCCAGGTGGGGGGGGGCTCGTGGAATTCACTTGTCCAATC GTCAGGGAGCTGAAGCCTATCGACTTCACCGACCCAGGGTTGATCAAACG GATTCGCGGCAACGCCTATTGCACCAAAGTCTCGCCACAAATTGCTAACC GCGTGGCAGAGTCGTCTCGAGGTGAAGCGTCGCGGGGCTCCGCCAGGTGG GGGGGGGCTCGTGGAATTCACTTGTCCAATCGTCAGGGAGCTGAAGCCTA TCGACTTCACCGACCCAGGGTTGATCAAACGGATTCGCGGCAACGCCTAT TGCACCAAAGTCTCGCCACAAATTGCTAACCGCGTGGCAGAGTCGTCTCG AGGACTTTTGAATCGACTACTGCCAGACGTGTGGGTACACACAGATCACA ACGCGGGGCGAGCGGGAGGGGAATCACCGGGATTTGCTTTGAGCCTCGTG GCGGAGTCGACTACGGGCGCTCTCTTGGTGGCAGAAACAGCAGCAGAAAA AGACTTTTGAATCGACTACTGCCAGACGTGTGGGTACACACAGATCACAA CGCGGGGCGAGCGGGAGGGGAATCACCGGGATTTGCTTTGAGCCTCGTGG CGGAGTCGACTACGGGCGCTCTCTTGGTGGCAGAAACAGCAGCAGAAAAA GGAACACTCCCCGAAGACCTAGGCAAGCTCGGCAGCAAGCTCATCTTGGA GGAAATCAAGGAACACTCCCCGAAGACCTAGGCAAGCTCGGCAGCAAGCT CATCTTGGAGGAAATCAAAAATGGTGGATGCGTAGACTCGTCCCACCAAA GCTTGGCGATGTTGCTGATGGTCTTGTGTCCGGAGGATGTGAGAAATGGT GGATGCGTAGACTCGTCCCACCAAAGCTTGGCGATGTTGCTGATGGTCTT GTGTCCGGAGGATGTGAGCCGCCTCCGCATTGGGAAACTGACTCAGTATA GTATCACCTACCTCCGCCACCTACGCGACTTCTTCGGGGCGTACTTTCGA CTCAAGCCGGACCCACTTACATCGACGCCGCCTCCGCATTGGGAAACTGA CTCAGTATAGTATCACCTACCTCCGCCACCTACGCGACTTCTTCGGGGCG TACTTTCGACTCAAGCCGGACCCACTTACATCGACGGTATTGCTCTCTTG TCAGGGTATTGGCTTCAAGAATTTGTCGAGAGGAGCAACCTAAGTATTGC TCTCTTGTCAGGGTATTGGCTTCAAGAATTTGTCGAGAGGAGCAACCTAA back to top
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