mRNA_F-serratus_M_contig97.21014.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig97.21014.1
Unique NamemRNA_F-serratus_M_contig97.21014.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: B9RQV4_RICCO (40S ribosomal protein S3, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RQV4_RICCO)

HSP 1 Score: 335 bits (860), Expect = 1.710e-110
Identity = 170/216 (78.70%), Postives = 194/216 (89.81%), Query Frame = 2 
Query:   92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
            M+T +SKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFPD++VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRFIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+  ++Y+D AVRHV++RQGVLG+ V IML  DP GK GP TPL D++TI  PKEE
Sbjct:    1 MSTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPRGKLGPMTPLPDLVTIHSPKEE 216
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BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A0D2UG16_GOSRA (KH type-2 domain-containing protein n=47 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0D2UG16_GOSRA)

HSP 1 Score: 335 bits (859), Expect = 2.990e-110
Identity = 168/216 (77.78%), Postives = 193/216 (89.35%), Query Frame = 2 
Query:   92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
            MA  +SKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRF FP+++VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG   ++Y+D AVRHV++RQGVLG+ V IML  DP GK+GP TPL D++TI PPKEE
Sbjct:    1 MAAQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 216
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BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A150H4K1_GONPE (KH type-2 domain-containing protein n=10 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150H4K1_GONPE)

HSP 1 Score: 334 bits (857), Expect = 4.380e-110
Identity = 170/229 (74.24%), Postives = 193/229 (84.28%), Query Frame = 2 
Query:   92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTPNFG*NT 778
            MA  +SKKRKFV DGVFYAELNELLT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRF+FP D+VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRA RAK+MKF+DGYM+ SG   + Y+D AVRHV++RQGVLG+ V IM   DPTGK GPKTPL DV+ +L PKEE   +  P  G  T
Sbjct:    1 MAVQISKKRKFVQDGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFDFPADSVELYAEKVTDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPAKVYIDGAVRHVLLRQGVLGIKVKIMKDWDPTGKRGPKTPLPDVVKVLEPKEEEIYQEKPYVGKET 229
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BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A251RDC6_PRUPE (30S ribosomal protein S3, chloroplastic n=6 Tax=Rosales TaxID=3744 RepID=A0A251RDC6_PRUPE)

HSP 1 Score: 334 bits (857), Expect = 5.400e-110
Identity = 169/223 (75.78%), Postives = 196/223 (87.89%), Query Frame = 2 
Query:   92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTP 760
            MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTS+VQKRF FP+++VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+   +Y+D AVRHV++RQGVLG+ V IML  DP GK+GP TPL D++TI  PKEE  L V P
Sbjct:    1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSIVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHSPKEEQYLPVPP 223
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BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A6P5T908_PRUAV (30S ribosomal protein S3, chloroplastic n=26 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6P5T908_PRUAV)

HSP 1 Score: 334 bits (857), Expect = 5.400e-110
Identity = 169/223 (75.78%), Postives = 196/223 (87.89%), Query Frame = 2 
Query:   92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTP 760
            MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTS+VQKRF FP+++VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+   +Y+D AVRHV++RQGVLG+ V IML  DP GK+GP TPL D++TI  PKEE  L V P
Sbjct:    1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSIVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHSPKEEQYLPVPP 223
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B9RQV4_RICCO1.710e-11078.7040S ribosomal protein S3, putative n=1 Tax=Ricinus... [more]
A0A0D2UG16_GOSRA2.990e-11077.78KH type-2 domain-containing protein n=47 Tax=Mesan... [more]
A0A150H4K1_GONPE4.380e-11074.24KH type-2 domain-containing protein n=10 Tax=Chlam... [more]
A0A251RDC6_PRUPE5.400e-11075.7830S ribosomal protein S3, chloroplastic n=6 Tax=Ro... [more]
A0A6P5T908_PRUAV5.400e-11075.7830S ribosomal protein S3, chloroplastic n=26 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:239866..244468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.2
Seed ortholog evalue1.6e-118
Seed eggNOG ortholog2880.D7G6B0
Preferred nameRPS3
KEGG koko:K02985
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGsCOG0092@1,KOG3181@2759
Ec32 ortholog descriptionRibosomal protein S3, C-terminal
Ec32 orthologEc-10_001190.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons8
Model size1456
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21014.1prot_F-serratus_M_contig97.21014.1Fucus serratus malepolypeptideF-serratus_M_contig97 239906..243784 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932747.417718-UTR-F-serratus_M_contig97:239865..2399051622932747.417718-UTR-F-serratus_M_contig97:239865..239905Fucus serratus maleUTRF-serratus_M_contig97 239866..239905 +
1690964454.0618844-UTR-F-serratus_M_contig97:239865..2399051690964454.0618844-UTR-F-serratus_M_contig97:239865..239905Fucus serratus maleUTRF-serratus_M_contig97 239866..239905 +
1622932747.6272197-UTR-F-serratus_M_contig97:243784..2444681622932747.6272197-UTR-F-serratus_M_contig97:243784..244468Fucus serratus maleUTRF-serratus_M_contig97 243785..244468 +
1690964454.1596553-UTR-F-serratus_M_contig97:243784..2444681690964454.1596553-UTR-F-serratus_M_contig97:243784..244468Fucus serratus maleUTRF-serratus_M_contig97 243785..244468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932747.4483705-CDS-F-serratus_M_contig97:239905..2399481622932747.4483705-CDS-F-serratus_M_contig97:239905..239948Fucus serratus maleCDSF-serratus_M_contig97 239906..239948 +
1690964454.0760229-CDS-F-serratus_M_contig97:239905..2399481690964454.0760229-CDS-F-serratus_M_contig97:239905..239948Fucus serratus maleCDSF-serratus_M_contig97 239906..239948 +
1622932747.4860725-CDS-F-serratus_M_contig97:240740..2408171622932747.4860725-CDS-F-serratus_M_contig97:240740..240817Fucus serratus maleCDSF-serratus_M_contig97 240741..240817 +
1690964454.0845213-CDS-F-serratus_M_contig97:240740..2408171690964454.0845213-CDS-F-serratus_M_contig97:240740..240817Fucus serratus maleCDSF-serratus_M_contig97 240741..240817 +
1622932747.5058558-CDS-F-serratus_M_contig97:241102..2412601622932747.5058558-CDS-F-serratus_M_contig97:241102..241260Fucus serratus maleCDSF-serratus_M_contig97 241103..241260 +
1690964454.0939174-CDS-F-serratus_M_contig97:241102..2412601690964454.0939174-CDS-F-serratus_M_contig97:241102..241260Fucus serratus maleCDSF-serratus_M_contig97 241103..241260 +
1622932747.5207095-CDS-F-serratus_M_contig97:241992..2420681622932747.5207095-CDS-F-serratus_M_contig97:241992..242068Fucus serratus maleCDSF-serratus_M_contig97 241993..242068 +
1690964454.1030228-CDS-F-serratus_M_contig97:241992..2420681690964454.1030228-CDS-F-serratus_M_contig97:241992..242068Fucus serratus maleCDSF-serratus_M_contig97 241993..242068 +
1622932747.5350666-CDS-F-serratus_M_contig97:242464..2425661622932747.5350666-CDS-F-serratus_M_contig97:242464..242566Fucus serratus maleCDSF-serratus_M_contig97 242465..242566 +
1690964454.1117861-CDS-F-serratus_M_contig97:242464..2425661690964454.1117861-CDS-F-serratus_M_contig97:242464..242566Fucus serratus maleCDSF-serratus_M_contig97 242465..242566 +
1622932747.5548606-CDS-F-serratus_M_contig97:242708..2427991622932747.5548606-CDS-F-serratus_M_contig97:242708..242799Fucus serratus maleCDSF-serratus_M_contig97 242709..242799 +
1690964454.1262753-CDS-F-serratus_M_contig97:242708..2427991690964454.1262753-CDS-F-serratus_M_contig97:242708..242799Fucus serratus maleCDSF-serratus_M_contig97 242709..242799 +
1622932747.583959-CDS-F-serratus_M_contig97:243137..2432261622932747.583959-CDS-F-serratus_M_contig97:243137..243226Fucus serratus maleCDSF-serratus_M_contig97 243138..243226 +
1690964454.1400597-CDS-F-serratus_M_contig97:243137..2432261690964454.1400597-CDS-F-serratus_M_contig97:243137..243226Fucus serratus maleCDSF-serratus_M_contig97 243138..243226 +
1622932747.6030855-CDS-F-serratus_M_contig97:243688..2437841622932747.6030855-CDS-F-serratus_M_contig97:243688..243784Fucus serratus maleCDSF-serratus_M_contig97 243689..243784 +
1690964454.1498091-CDS-F-serratus_M_contig97:243688..2437841690964454.1498091-CDS-F-serratus_M_contig97:243688..243784Fucus serratus maleCDSF-serratus_M_contig97 243689..243784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig97.21014.1

>prot_F-serratus_M_contig97.21014.1 ID=prot_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=polypeptide|length=244bp
MVWYEISRRVAGARGTAMATNVSKKRKFVADGVFYAELNELLTQELAEEG
YAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDA
VELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKG
AEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLG
VTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTPNFG*
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mRNA from alignment at F-serratus_M_contig97:239866..244468+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig97.21014.1 ID=mRNA_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=mRNA|length=4603bp|location=Sequence derived from alignment at F-serratus_M_contig97:239866..244468+ (Fucus serratus male)
GGCGAACGCGTTCACTGGAGCGTGAAGCCCGCGAGAGGTCATGGTATGGT
ACGAAATATCACGGCGAGTTGCCGGGGCCAGAGGTGAGGCTGCCGCAGAT
CGCTGCTGGGATATGTTGTTCGGTGCCGGCACAGTGGCTTTTCTTGGTCC
TTCAACAATTTCACAGAAATCGCTGTCATCTTCGTCGTGAGAAGGGGGAG
GCGGCGGCGGCCGCGTCGATTTCGCCCTCCCATCTCCCTCAGCCCTTCGC
TTTGGCATGGGCAGCACGAACAATTCTAGTTCCTCCGTTCTCTCGCGTGA
TGAAAAAATTCCTTCCTAAGTATCAAACTAGGTCGGATACCTTTCTCCTC
ATTCCACAGCAGAAAGTATTTGTACGTTATGGCTACGGACAGTGTACAAC
ACCAGCTCGTGGGTTTCCATTTATGTAAGATGTCAACACCGTCGCAGTCT
CAGATGACTACAAGTACAAAAGTCCCTGTAAAAACACGAAACCAGCTATT
TATAAAACCCGGCCGACCTCTTCTGTATCCCGAGAAGTCCGACACACAAC
TCTCCCCTCCCTAAGGGCTTTTCAAGGTAACAAGTGCATATGATGCAGGG
ACGATCTCTTTGGCAGCAGCACACGAACTCGATATCGAGTAGTTTTCCCG
TTTGCACTCCACTCATGCAGTGGATCCCACACATTATGTTGTGCTCCTGC
GATCGATCTTTCGAGCCCTCCGCCGCCACTCATGGCTACGTAGGGAGGAC
CCGGTCGCAGACAAGCCTAGAATTTAGGTTTCCGTTGCTTTCGTAACTCC
ACCCATGAAATGAATGCCCTTTCACTTACGACCTTGAATGTTGACTTCCT
ATACGTACGACTCACATTTTTTTAGGCACAGCCATGGCGACCAACGTTTC
CAAGAAGCGCAAGTTTGTGGCGGACGGTGTCTTCTATGCTGAGCTGAACG
AGGTGGAGTCCAACTTGTACTGTCTGTATTATACATTGATCGATTAGTAC
CTGTAATGCATCCTTCCATCTCCCCCTCCACTTCTCGTCAACCGATTCCT
AGTTGTACCCTTGTTATATCAGTAGCGCAGTAACCCCATTGTTGGTCTCC
TCAAGCCAGCTTAAGCCGACAGAACGCTTGGATTTCAATCGGTACTGACG
CTTTTCTTTGTCGCCTTTGTTTTCACCATTTCTCGTTGCTGTACTGGTAC
CACTGTATCCTCCTCTCTGTTCTGTATCATTGCGCAGCTCCTCACCCAGG
AGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCGTGACTCCCCTC
CGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAATGTCCTCGGCGA
GAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCAGAAACGGTGCG
CTCGCGTTGTTCTCCACTCACTTTTTTTTTCAATATGTTGAAAGTACGGG
TAGGAGGTAACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCC
CAGCGAACGAGATTTTTCTCACTAAAAACTAAAGTTAAAATGCCCAACGA
GTGGAGAACGATTAAATCGAAAGTACACAAAATTCGACTTCACGGTCGAC
GAGGAAAAGGAATGGCTGAATGGCACGCACCGCAGAAGGAAATGTAGCTG
AGAAATCCTGTGTGACCTTCCCAGCGAACGTGGTGTCCAGAATGAATGGC
AAGAAAACACAAACACACACCAAGTACAAAAGCAACCGAAAAATGATCGG
GCTCCCATACTTCCTCGTGATACTAGTGTATGTGTGATCACCGTACATAC
ATATACTGACCGAGGATAATACTATTTTTCGTGAGTCAACACGCTTTCAT
TTGCCCACCGTTGATTACCAGGTACAGTTGTTGATTCACACATTCAGCGT
GTTATCTTTGCAACTGAAGAATCTACAGCGTACATTATATCTAATTAAAA
ACCCGAACTGAAGAGGCAGCCAGTTGTGCCGGACTGTTGGCATTTCACGT
GCGGCTTGAGCTCCGAATTGTCGACATGAACGAGGTGCTTTACCTTTTGC
AGATGTTACCTGGTTCTGTGACTGACCTCAACGGTTTGCGCTGTGCAACC
ATGACTATGGTCCTGGTACGTTCACAGGTTCAACTTCCCCGATGACGCTG
TCGAGCTCTACGCGGAACGAGTTGCGAAGCGCGGCCTCTGTGCGCAGACC
CAGGTTTGTTGTTTCGACTCTTGGGGAAGTCGATAACTGTGTAGTAATCA
GAAAATGGACCATGGTATGTGGTGTGTGCTTTGCTTATCAAACTTCCCTC
CTAACTTGAACTGAGACAACAAATCATTACGCATCCTCCAGGTGACAAAA
TTCCGTTTTACGTTCTGGTTGCCCAGGTTCCGCAAGGGATCGAAGCGAAG
CTGCGTTCCATAGCATTATGTTAAATATGGCTAGTAGAAGAAAATTGTAT
TAAAAGTAATATGCCCAACGAGATTGGCTATAGCATCATGTGAAATATGG
CTAGTAGAAAAAAAAAATGTTAAAAGTAATATGCCCAACGAGATTGGCGT
TGCGTCTAGGCTCGAGCCAGCTCAACACTCTGTTTCACGAACTCCGCAGG
CCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCGTGCGCCGTGCA
TGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCCAAAGGTGCTGA
GGTGAGAGTATGACGCCACAAACGCTTTCGTCTTGTATTTCTGTGTTACC
TCGCTCTCTGCCCGCCGTTGAAGCATATCGAGATAAATGATGTTCGTCTG
TGTTGCCATCCTCAACATGGCACGCTACGCTTGACTACACCAGGTGATCG
TGGCCGGTAAGCTCAGGGCGCAGCGTGCGAAAGCGATGAAATTCCGCGAT
GGCTACATGATCAAGAGCGGACGCGTGAGGGAGGGTGAGTATGTCCTCCT
AACAGTGATGTTGACAACGGTGTCAGTAGAGGAAGCACTTAAGTAGTTGG
GAGAGGCTTTCTGGTTCTGAGGTTTTAGCTTCGAGCGTATACTTACGAGC
CGTTTCGAATGATCTTGACAACTAATGGTATGTAGTCAAGGTTACCAAGC
GGTATCGCAACAAATACTTTCGATGTACGAGTAGCCAAGGTGTTTATAGA
CTACTTTTGATATAAAAGTGGCACAAATAAAGTTAGGGCGGCTGACTCAA
TGCTGAAGCTTTTCATGGCACCACGAGTGATATATATCTAACCGGCCCAT
GTGGATAACTTTCTATCTTCAGATTATGTGGACCACGCTGTTCGGCACGT
GATGATGCGTCAGGGTGTGCTGGGTGTTACGGTTTCCATCATGCTTCCCC
ACGACCCTACGGTGAGTTTAATCTTTCGATAGGGTGCGACTCGATACGAA
GTCTCATATTTTCGCATGTCACGATGTGTCGCCTACTCTGAAATGAAGTT
TAAAACACGCCAGTGTGGGGATTCCGCTTTGAAATGACGCTCGTTGTAGG
GCTCGACAAGTCGAGATCTAGCCTTCAAGTTTGTGAACCTTGTCAAATTG
AGGCTGAAAGAATGCATTTGTGTGTGACGCTTATCCGCGAGCCAATTTCT
TCACCAGATCTGATTATCGCCGTTGAAAATGTGGGAGTAGAAATTTCTTC
TAACCACCAGTACAAGTTTTTCGATCTTCCACTTTCTCTGCATTTGGTTC
ATCCTCAACATTATTGATTGTTTACGTGGCCTCCGTTGGTTGATTGGGAA
CTGTAAAAGATTTTGGACATTTTTCGAGACAATGACGGAGTTCTCCGTCT
CGTCCCTTTGCTGTTGGCTGCAGGGCAAGGAGGGCCCGAAGACTCCTCTG
TCGGACGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGT
TACCCCCAACTTCGGTTGAAACACGCATGGTTAATTTTGCCTGCGCTGGG
TAGTCGTGACTGCACACTGCGGTCTAGTTTGGTTTGAGGAGGGGTGGAGT
AGCACTGAAATTTCGTGAAAGCAACCAATGGAAGTGCTTCAGTATATGCA
CGGACTCATTTTCTCTTTTTTCAAGATAACTCTTGTTCCGCACGAAGTGC
GTCACCCCATCACATGATTCAGACACAATGACTATTGTAGTACGAAGACG
ACTCCAGCAATGGCACGACACAATCTACTTTACTTGAGCATAGCAAGCCC
GTTTTCATTGATGTGATGGCACAAAGACTGCCATCTAGCTTGAGGAGGGG
CAAAATGGCGCTGAAATGTCATCAAAGCAACCGATGGAAGTCCTGCAGCA
TTATAAGCACGACTCATTTGCTCTTTTCTTAAGATATCCCTAGTTTGCTT
CACCCCACTTTACTCAAAACACCATGCCTACAGGCTGGGCTGGCCAAGAC
GCTGTACACATGGCGGAATGGGATTTGCCACGCGGTTTTTACGATTTTTC
ACCAGAAATTTTGACACGTGATTTAGACCGCTCTTGCGGAGAGGACCACC
CCTGCACATTTTGGTTTTAGTTTTTTTTCGTAAGTTATGGTATGATAGCC
GGATATAAGTAGATGTGGGAATATTTGTTTCGCGACGAAATTATGGGAAA
AAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig97:239866..244468+

>mRNA_F-serratus_M_contig97.21014.1 ID=mRNA_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=CDS|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig97:239866..244468+ (Fucus serratus male)
ATGGTATGGTACGAAATATCACGGCGAGTTGCCGGGGCCAGAGATGGTAT
GGTACGAAATATCACGGCGAGTTGCCGGGGCCAGAGGCACAGCCATGGCG
ACCAACGTTTCCAAGAAGCGCAAGTTTGTGGCGGACGGTGTCTTCTATGC
TGAGCTGAACGAGGCACAGCCATGGCGACCAACGTTTCCAAGAAGCGCAA
GTTTGTGGCGGACGGTGTCTTCTATGCTGAGCTGAACGAGCTCCTCACCC
AGGAGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCGTGACTCCC
CTCCGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAATGTCCTCGG
CGAGAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCAGAAACGCT
CCTCACCCAGGAGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCG
TGACTCCCCTCCGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAAT
GTCCTCGGCGAGAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCA
GAAACGGTTCAACTTCCCCGATGACGCTGTCGAGCTCTACGCGGAACGAG
TTGCGAAGCGCGGCCTCTGTGCGCAGACCCAGGTTCAACTTCCCCGATGA
CGCTGTCGAGCTCTACGCGGAACGAGTTGCGAAGCGCGGCCTCTGTGCGC
AGACCCAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCGTG
CGCCGTGCATGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCCAA
AGGTGCTGAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCG
TGCGCCGTGCATGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCC
AAAGGTGCTGAGGTGATCGTGGCCGGTAAGCTCAGGGCGCAGCGTGCGAA
AGCGATGAAATTCCGCGATGGCTACATGATCAAGAGCGGACGCGTGAGGG
AGGGTGATCGTGGCCGGTAAGCTCAGGGCGCAGCGTGCGAAAGCGATGAA
ATTCCGCGATGGCTACATGATCAAGAGCGGACGCGTGAGGGAGGATTATG
TGGACCACGCTGTTCGGCACGTGATGATGCGTCAGGGTGTGCTGGGTGTT
ACGGTTTCCATCATGCTTCCCCACGACCCTACGATTATGTGGACCACGCT
GTTCGGCACGTGATGATGCGTCAGGGTGTGCTGGGTGTTACGGTTTCCAT
CATGCTTCCCCACGACCCTACGGGCAAGGAGGGCCCGAAGACTCCTCTGT
CGGACGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGTT
ACCCCCAACTTCGGTTGAGGCAAGGAGGGCCCGAAGACTCCTCTGTCGGA
CGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGTTACCC
CCAACTTCGGTTGA
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