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Homology
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A7S2PJ71_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJ71_9STRA) HSP 1 Score: 337 bits (864), Expect = 4.730e-111 Identity = 170/215 (79.07%), Postives = 189/215 (87.91%), Query Frame = 2
Query: 98 TNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 742
+ +S KRKFVADGVFYAELNELLT ELAE+GYAGVEVR TP RTE+II ATR QNVLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLK+KLLGGLAVRRACYGV+RF+ME+ AKG EVIV+GKLR QRAKAMKF DGYMIK+G + Y D AVRHVM+RQG++GV VSIMLPHDP+GK+GPK PL D +TIL PKEE+
Sbjct: 2 SKISTKRKFVADGVFYAELNELLTSELAEDGYAGVEVRTTPHRTEVIIRATRTQNVLGEKGQRIRELTSVVQKRFDFADGAVELYAERVANRGLCAQAQAESLKFKLLGGLAVRRACYGVVRFVMEANAKGVEVIVSGKLRGQRAKAMKFCDGYMIKTGHAGQVYTDTAVRHVMLRQGIIGVRVSIMLPHDPSGKDGPKIPLDDAVTILEPKEEV 216
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A0C9S7C2_9SPER (30S ribosomal protein S3, chloroplastic n=6 Tax=Spermatophyta TaxID=58024 RepID=A0A0C9S7C2_9SPER) HSP 1 Score: 337 bits (863), Expect = 5.830e-111 Identity = 172/226 (76.11%), Postives = 196/226 (86.73%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTPNFG 769
MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLC+ QAESL+YKLLGGLAVRRACYGVLRFIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+ V IML DP GK GP TPL DV+TI PKEE L + P G
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENTVELYAEKVNNRGLCSIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTPLPDVVTIHTPKEEEDLSLKPLVG 226
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A2R6XUZ1_MARPO (30S ribosomal protein S3, chloroplastic n=49 Tax=Embryophyta TaxID=3193 RepID=A0A2R6XUZ1_MARPO) HSP 1 Score: 336 bits (862), Expect = 7.970e-111 Identity = 171/226 (75.66%), Postives = 195/226 (86.28%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTPNFG 769
MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRFIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG +Y+D AVRHV++RQGVLG+ V IML DP GK+GP TPL D++TI PKEE + P G
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENTVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDMVTIHTPKEEEEFAMKPFIG 226
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A1W0A5I5_9STRA (40S ribosomal protein S3-3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5I5_9STRA) HSP 1 Score: 336 bits (862), Expect = 8.550e-111 Identity = 173/224 (77.23%), Postives = 194/224 (86.61%), Query Frame = 2
Query: 101 NVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIA---LEVTPN 763
N+SKKRKF+ADGVF+AELNE L ELAE+GY+GVEVRVTP+RTE+II ATR Q VLGEKGQRIRELTSVVQKRFNF D AVELYAERVA RGLCAQ QAESLK+KLLGGLAVRRA GVLRF+MESGAKG EVIV+GKLRAQRAKAMKF++GYM+K+G +YVD AVRHV+MRQGVLGV V+IMLPHDPTG+ GPK L DV+TIL PKEE+ +E TP
Sbjct: 6 NISKKRKFIADGVFFAELNEFLQTELAEDGYSGVEVRVTPVRTEVIIRATRTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKFKLLGGLAVRRAAMGVLRFVMESGAKGCEVIVSGKLRAQRAKAMKFKEGYMVKTGNANLEYVDTAVRHVLMRQGVLGVKVNIMLPHDPTGRLGPKRQLDDVVTILEPKEEVYRPYVEPTPE 229
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: W5I1R7_WHEAT (KH type-2 domain-containing protein n=28 Tax=cellular organisms TaxID=131567 RepID=W5I1R7_WHEAT) HSP 1 Score: 336 bits (861), Expect = 9.480e-111 Identity = 169/219 (77.17%), Postives = 194/219 (88.58%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIAL 748
MAT +SKK+KFV+DGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+ V IML DP GK GP TPL D++TI PPKEE L
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 219
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: I1I1A9_BRADI (KH type-2 domain-containing protein n=4 Tax=Pooideae TaxID=147368 RepID=I1I1A9_BRADI) HSP 1 Score: 336 bits (861), Expect = 9.480e-111 Identity = 169/219 (77.17%), Postives = 194/219 (88.58%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIAL 748
MAT +SKK+KFV+DGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+ V IML DP GK GP TPL D++TI PPKEE L
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 219
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A067KFX0_JATCU (KH type-2 domain-containing protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A067KFX0_JATCU) HSP 1 Score: 336 bits (861), Expect = 1.390e-110 Identity = 169/216 (78.24%), Postives = 195/216 (90.28%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLG+KG+RIRELTSVVQKRF FP+++VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRFIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +DY+D AVRHV++RQGVLG+ V IML DP GK+GP TPL D++TI PPKEE
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHPPKEE 216
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A565BKT6_9BRAS (KH type-2 domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565BKT6_9BRAS) HSP 1 Score: 336 bits (862), Expect = 1.600e-110 Identity = 168/216 (77.78%), Postives = 193/216 (89.35%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
MAT +SKKRKFVADGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTS+VQKRF FP D+VELYAE+V RGLCA QAESL+YKLLGG AVRRACYGVLRF+ME+GAKG EVIV+GKLRAQRAK+MKF+DGYM+ SG+ ++Y+D AVRHVM+RQGVLG+ V IML DPTGK+GP TPL DV+ I PPKEE
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVMNRGLCAIAQAESLRYKLLGGXAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPTKEYIDSAVRHVMLRQGVLGIKVKIMLDWDPTGKQGPMTPLPDVVIIHPPKEE 216
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A4S8JYP6_MUSBA (KH type-2 domain-containing protein n=8 Tax=Zingiberales TaxID=4618 RepID=A0A4S8JYP6_MUSBA) HSP 1 Score: 335 bits (860), Expect = 1.660e-110 Identity = 168/216 (77.78%), Postives = 194/216 (89.81%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+ V IML DP GK+GP TPL D++TI PPK+E
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHPPKDE 216
BLAST of mRNA_F-serratus_M_contig97.21014.1 vs. uniprot
Match: A0A804IEI5_MUSAM (KH type-2 domain-containing protein n=8 Tax=Mesangiospermae TaxID=1437183 RepID=A0A804IEI5_MUSAM) HSP 1 Score: 335 bits (860), Expect = 1.660e-110 Identity = 168/216 (77.78%), Postives = 194/216 (89.81%), Query Frame = 2
Query: 92 MATNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 739
MAT +SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+ V IML DP GK+GP TPL D++TI PPK+E
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHPPKDE 216
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 432.2 |
Seed ortholog evalue | 1.6e-118 |
Seed eggNOG ortholog | 2880.D7G6B0 |
Preferred name | RPS3 |
KEGG ko | ko:K02985 |
KEGG Pathway | ko03010,map03010 |
KEGG Module | M00177 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272 |
EggNOG free text desc. | oxidized purine nucleobase lesion DNA N-glycosylase activity |
EggNOG OGs | COG0092@1,KOG3181@2759 |
Ec32 ortholog description | Ribosomal protein S3, C-terminal |
Ec32 ortholog | Ec-10_001190.1 |
COG Functional cat. | J |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
Exons | 8 |
Model size | 1456 |
Cds size | 732 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932747.417718-UTR-F-serratus_M_contig97:239865..239905 | 1622932747.417718-UTR-F-serratus_M_contig97:239865..239905 | Fucus serratus male | UTR | F-serratus_M_contig97 239866..239905 + |
1690964454.0618844-UTR-F-serratus_M_contig97:239865..239905 | 1690964454.0618844-UTR-F-serratus_M_contig97:239865..239905 | Fucus serratus male | UTR | F-serratus_M_contig97 239866..239905 + |
1622932747.6272197-UTR-F-serratus_M_contig97:243784..244468 | 1622932747.6272197-UTR-F-serratus_M_contig97:243784..244468 | Fucus serratus male | UTR | F-serratus_M_contig97 243785..244468 + |
1690964454.1596553-UTR-F-serratus_M_contig97:243784..244468 | 1690964454.1596553-UTR-F-serratus_M_contig97:243784..244468 | Fucus serratus male | UTR | F-serratus_M_contig97 243785..244468 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932747.4483705-CDS-F-serratus_M_contig97:239905..239948 | 1622932747.4483705-CDS-F-serratus_M_contig97:239905..239948 | Fucus serratus male | CDS | F-serratus_M_contig97 239906..239948 + |
1690964454.0760229-CDS-F-serratus_M_contig97:239905..239948 | 1690964454.0760229-CDS-F-serratus_M_contig97:239905..239948 | Fucus serratus male | CDS | F-serratus_M_contig97 239906..239948 + |
1622932747.4860725-CDS-F-serratus_M_contig97:240740..240817 | 1622932747.4860725-CDS-F-serratus_M_contig97:240740..240817 | Fucus serratus male | CDS | F-serratus_M_contig97 240741..240817 + |
1690964454.0845213-CDS-F-serratus_M_contig97:240740..240817 | 1690964454.0845213-CDS-F-serratus_M_contig97:240740..240817 | Fucus serratus male | CDS | F-serratus_M_contig97 240741..240817 + |
1622932747.5058558-CDS-F-serratus_M_contig97:241102..241260 | 1622932747.5058558-CDS-F-serratus_M_contig97:241102..241260 | Fucus serratus male | CDS | F-serratus_M_contig97 241103..241260 + |
1690964454.0939174-CDS-F-serratus_M_contig97:241102..241260 | 1690964454.0939174-CDS-F-serratus_M_contig97:241102..241260 | Fucus serratus male | CDS | F-serratus_M_contig97 241103..241260 + |
1622932747.5207095-CDS-F-serratus_M_contig97:241992..242068 | 1622932747.5207095-CDS-F-serratus_M_contig97:241992..242068 | Fucus serratus male | CDS | F-serratus_M_contig97 241993..242068 + |
1690964454.1030228-CDS-F-serratus_M_contig97:241992..242068 | 1690964454.1030228-CDS-F-serratus_M_contig97:241992..242068 | Fucus serratus male | CDS | F-serratus_M_contig97 241993..242068 + |
1622932747.5350666-CDS-F-serratus_M_contig97:242464..242566 | 1622932747.5350666-CDS-F-serratus_M_contig97:242464..242566 | Fucus serratus male | CDS | F-serratus_M_contig97 242465..242566 + |
1690964454.1117861-CDS-F-serratus_M_contig97:242464..242566 | 1690964454.1117861-CDS-F-serratus_M_contig97:242464..242566 | Fucus serratus male | CDS | F-serratus_M_contig97 242465..242566 + |
1622932747.5548606-CDS-F-serratus_M_contig97:242708..242799 | 1622932747.5548606-CDS-F-serratus_M_contig97:242708..242799 | Fucus serratus male | CDS | F-serratus_M_contig97 242709..242799 + |
1690964454.1262753-CDS-F-serratus_M_contig97:242708..242799 | 1690964454.1262753-CDS-F-serratus_M_contig97:242708..242799 | Fucus serratus male | CDS | F-serratus_M_contig97 242709..242799 + |
1622932747.583959-CDS-F-serratus_M_contig97:243137..243226 | 1622932747.583959-CDS-F-serratus_M_contig97:243137..243226 | Fucus serratus male | CDS | F-serratus_M_contig97 243138..243226 + |
1690964454.1400597-CDS-F-serratus_M_contig97:243137..243226 | 1690964454.1400597-CDS-F-serratus_M_contig97:243137..243226 | Fucus serratus male | CDS | F-serratus_M_contig97 243138..243226 + |
1622932747.6030855-CDS-F-serratus_M_contig97:243688..243784 | 1622932747.6030855-CDS-F-serratus_M_contig97:243688..243784 | Fucus serratus male | CDS | F-serratus_M_contig97 243689..243784 + |
1690964454.1498091-CDS-F-serratus_M_contig97:243688..243784 | 1690964454.1498091-CDS-F-serratus_M_contig97:243688..243784 | Fucus serratus male | CDS | F-serratus_M_contig97 243689..243784 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21014.1 >prot_F-serratus_M_contig97.21014.1 ID=prot_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=polypeptide|length=244bp
MVWYEISRRVAGARGTAMATNVSKKRKFVADGVFYAELNELLTQELAEEG YAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDA VELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKG AEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLG VTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEVTPNFG* back to topmRNA from alignment at F-serratus_M_contig97:239866..244468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig97.21014.1 ID=mRNA_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=mRNA|length=4603bp|location=Sequence derived from alignment at F-serratus_M_contig97:239866..244468+ (Fucus serratus male) GGCGAACGCGTTCACTGGAGCGTGAAGCCCGCGAGAGGTCATGGTATGGT
ACGAAATATCACGGCGAGTTGCCGGGGCCAGAGGTGAGGCTGCCGCAGAT
CGCTGCTGGGATATGTTGTTCGGTGCCGGCACAGTGGCTTTTCTTGGTCC
TTCAACAATTTCACAGAAATCGCTGTCATCTTCGTCGTGAGAAGGGGGAG
GCGGCGGCGGCCGCGTCGATTTCGCCCTCCCATCTCCCTCAGCCCTTCGC
TTTGGCATGGGCAGCACGAACAATTCTAGTTCCTCCGTTCTCTCGCGTGA
TGAAAAAATTCCTTCCTAAGTATCAAACTAGGTCGGATACCTTTCTCCTC
ATTCCACAGCAGAAAGTATTTGTACGTTATGGCTACGGACAGTGTACAAC
ACCAGCTCGTGGGTTTCCATTTATGTAAGATGTCAACACCGTCGCAGTCT
CAGATGACTACAAGTACAAAAGTCCCTGTAAAAACACGAAACCAGCTATT
TATAAAACCCGGCCGACCTCTTCTGTATCCCGAGAAGTCCGACACACAAC
TCTCCCCTCCCTAAGGGCTTTTCAAGGTAACAAGTGCATATGATGCAGGG
ACGATCTCTTTGGCAGCAGCACACGAACTCGATATCGAGTAGTTTTCCCG
TTTGCACTCCACTCATGCAGTGGATCCCACACATTATGTTGTGCTCCTGC
GATCGATCTTTCGAGCCCTCCGCCGCCACTCATGGCTACGTAGGGAGGAC
CCGGTCGCAGACAAGCCTAGAATTTAGGTTTCCGTTGCTTTCGTAACTCC
ACCCATGAAATGAATGCCCTTTCACTTACGACCTTGAATGTTGACTTCCT
ATACGTACGACTCACATTTTTTTAGGCACAGCCATGGCGACCAACGTTTC
CAAGAAGCGCAAGTTTGTGGCGGACGGTGTCTTCTATGCTGAGCTGAACG
AGGTGGAGTCCAACTTGTACTGTCTGTATTATACATTGATCGATTAGTAC
CTGTAATGCATCCTTCCATCTCCCCCTCCACTTCTCGTCAACCGATTCCT
AGTTGTACCCTTGTTATATCAGTAGCGCAGTAACCCCATTGTTGGTCTCC
TCAAGCCAGCTTAAGCCGACAGAACGCTTGGATTTCAATCGGTACTGACG
CTTTTCTTTGTCGCCTTTGTTTTCACCATTTCTCGTTGCTGTACTGGTAC
CACTGTATCCTCCTCTCTGTTCTGTATCATTGCGCAGCTCCTCACCCAGG
AGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCGTGACTCCCCTC
CGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAATGTCCTCGGCGA
GAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCAGAAACGGTGCG
CTCGCGTTGTTCTCCACTCACTTTTTTTTTCAATATGTTGAAAGTACGGG
TAGGAGGTAACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCC
CAGCGAACGAGATTTTTCTCACTAAAAACTAAAGTTAAAATGCCCAACGA
GTGGAGAACGATTAAATCGAAAGTACACAAAATTCGACTTCACGGTCGAC
GAGGAAAAGGAATGGCTGAATGGCACGCACCGCAGAAGGAAATGTAGCTG
AGAAATCCTGTGTGACCTTCCCAGCGAACGTGGTGTCCAGAATGAATGGC
AAGAAAACACAAACACACACCAAGTACAAAAGCAACCGAAAAATGATCGG
GCTCCCATACTTCCTCGTGATACTAGTGTATGTGTGATCACCGTACATAC
ATATACTGACCGAGGATAATACTATTTTTCGTGAGTCAACACGCTTTCAT
TTGCCCACCGTTGATTACCAGGTACAGTTGTTGATTCACACATTCAGCGT
GTTATCTTTGCAACTGAAGAATCTACAGCGTACATTATATCTAATTAAAA
ACCCGAACTGAAGAGGCAGCCAGTTGTGCCGGACTGTTGGCATTTCACGT
GCGGCTTGAGCTCCGAATTGTCGACATGAACGAGGTGCTTTACCTTTTGC
AGATGTTACCTGGTTCTGTGACTGACCTCAACGGTTTGCGCTGTGCAACC
ATGACTATGGTCCTGGTACGTTCACAGGTTCAACTTCCCCGATGACGCTG
TCGAGCTCTACGCGGAACGAGTTGCGAAGCGCGGCCTCTGTGCGCAGACC
CAGGTTTGTTGTTTCGACTCTTGGGGAAGTCGATAACTGTGTAGTAATCA
GAAAATGGACCATGGTATGTGGTGTGTGCTTTGCTTATCAAACTTCCCTC
CTAACTTGAACTGAGACAACAAATCATTACGCATCCTCCAGGTGACAAAA
TTCCGTTTTACGTTCTGGTTGCCCAGGTTCCGCAAGGGATCGAAGCGAAG
CTGCGTTCCATAGCATTATGTTAAATATGGCTAGTAGAAGAAAATTGTAT
TAAAAGTAATATGCCCAACGAGATTGGCTATAGCATCATGTGAAATATGG
CTAGTAGAAAAAAAAAATGTTAAAAGTAATATGCCCAACGAGATTGGCGT
TGCGTCTAGGCTCGAGCCAGCTCAACACTCTGTTTCACGAACTCCGCAGG
CCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCGTGCGCCGTGCA
TGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCCAAAGGTGCTGA
GGTGAGAGTATGACGCCACAAACGCTTTCGTCTTGTATTTCTGTGTTACC
TCGCTCTCTGCCCGCCGTTGAAGCATATCGAGATAAATGATGTTCGTCTG
TGTTGCCATCCTCAACATGGCACGCTACGCTTGACTACACCAGGTGATCG
TGGCCGGTAAGCTCAGGGCGCAGCGTGCGAAAGCGATGAAATTCCGCGAT
GGCTACATGATCAAGAGCGGACGCGTGAGGGAGGGTGAGTATGTCCTCCT
AACAGTGATGTTGACAACGGTGTCAGTAGAGGAAGCACTTAAGTAGTTGG
GAGAGGCTTTCTGGTTCTGAGGTTTTAGCTTCGAGCGTATACTTACGAGC
CGTTTCGAATGATCTTGACAACTAATGGTATGTAGTCAAGGTTACCAAGC
GGTATCGCAACAAATACTTTCGATGTACGAGTAGCCAAGGTGTTTATAGA
CTACTTTTGATATAAAAGTGGCACAAATAAAGTTAGGGCGGCTGACTCAA
TGCTGAAGCTTTTCATGGCACCACGAGTGATATATATCTAACCGGCCCAT
GTGGATAACTTTCTATCTTCAGATTATGTGGACCACGCTGTTCGGCACGT
GATGATGCGTCAGGGTGTGCTGGGTGTTACGGTTTCCATCATGCTTCCCC
ACGACCCTACGGTGAGTTTAATCTTTCGATAGGGTGCGACTCGATACGAA
GTCTCATATTTTCGCATGTCACGATGTGTCGCCTACTCTGAAATGAAGTT
TAAAACACGCCAGTGTGGGGATTCCGCTTTGAAATGACGCTCGTTGTAGG
GCTCGACAAGTCGAGATCTAGCCTTCAAGTTTGTGAACCTTGTCAAATTG
AGGCTGAAAGAATGCATTTGTGTGTGACGCTTATCCGCGAGCCAATTTCT
TCACCAGATCTGATTATCGCCGTTGAAAATGTGGGAGTAGAAATTTCTTC
TAACCACCAGTACAAGTTTTTCGATCTTCCACTTTCTCTGCATTTGGTTC
ATCCTCAACATTATTGATTGTTTACGTGGCCTCCGTTGGTTGATTGGGAA
CTGTAAAAGATTTTGGACATTTTTCGAGACAATGACGGAGTTCTCCGTCT
CGTCCCTTTGCTGTTGGCTGCAGGGCAAGGAGGGCCCGAAGACTCCTCTG
TCGGACGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGT
TACCCCCAACTTCGGTTGAAACACGCATGGTTAATTTTGCCTGCGCTGGG
TAGTCGTGACTGCACACTGCGGTCTAGTTTGGTTTGAGGAGGGGTGGAGT
AGCACTGAAATTTCGTGAAAGCAACCAATGGAAGTGCTTCAGTATATGCA
CGGACTCATTTTCTCTTTTTTCAAGATAACTCTTGTTCCGCACGAAGTGC
GTCACCCCATCACATGATTCAGACACAATGACTATTGTAGTACGAAGACG
ACTCCAGCAATGGCACGACACAATCTACTTTACTTGAGCATAGCAAGCCC
GTTTTCATTGATGTGATGGCACAAAGACTGCCATCTAGCTTGAGGAGGGG
CAAAATGGCGCTGAAATGTCATCAAAGCAACCGATGGAAGTCCTGCAGCA
TTATAAGCACGACTCATTTGCTCTTTTCTTAAGATATCCCTAGTTTGCTT
CACCCCACTTTACTCAAAACACCATGCCTACAGGCTGGGCTGGCCAAGAC
GCTGTACACATGGCGGAATGGGATTTGCCACGCGGTTTTTACGATTTTTC
ACCAGAAATTTTGACACGTGATTTAGACCGCTCTTGCGGAGAGGACCACC
CCTGCACATTTTGGTTTTAGTTTTTTTTCGTAAGTTATGGTATGATAGCC
GGATATAAGTAGATGTGGGAATATTTGTTTCGCGACGAAATTATGGGAAA
AAT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig97:239866..244468+ >mRNA_F-serratus_M_contig97.21014.1 ID=mRNA_F-serratus_M_contig97.21014.1|Name=mRNA_F-serratus_M_contig97.21014.1|organism=Fucus serratus male|type=CDS|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig97:239866..244468+ (Fucus serratus male) ATGGTATGGTACGAAATATCACGGCGAGTTGCCGGGGCCAGAGATGGTAT GGTACGAAATATCACGGCGAGTTGCCGGGGCCAGAGGCACAGCCATGGCG ACCAACGTTTCCAAGAAGCGCAAGTTTGTGGCGGACGGTGTCTTCTATGC TGAGCTGAACGAGGCACAGCCATGGCGACCAACGTTTCCAAGAAGCGCAA GTTTGTGGCGGACGGTGTCTTCTATGCTGAGCTGAACGAGCTCCTCACCC AGGAGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCGTGACTCCC CTCCGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAATGTCCTCGG CGAGAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCAGAAACGCT CCTCACCCAGGAGCTGGCGGAGGAGGGATACGCCGGCGTGGAAGTTCGCG TGACTCCCCTCCGTACCGAGATTATCATCAGCGCCACCCGCCCACAAAAT GTCCTCGGCGAGAAGGGTCAGCGCATCAGGGAACTCACCTCAGTTGTGCA GAAACGGTTCAACTTCCCCGATGACGCTGTCGAGCTCTACGCGGAACGAG TTGCGAAGCGCGGCCTCTGTGCGCAGACCCAGGTTCAACTTCCCCGATGA CGCTGTCGAGCTCTACGCGGAACGAGTTGCGAAGCGCGGCCTCTGTGCGC AGACCCAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCGTG CGCCGTGCATGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCCAA AGGTGCTGAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGTCTCGCCG TGCGCCGTGCATGCTACGGTGTCCTACGCTTCATCATGGAGTCTGGGGCC AAAGGTGCTGAGGTGATCGTGGCCGGTAAGCTCAGGGCGCAGCGTGCGAA AGCGATGAAATTCCGCGATGGCTACATGATCAAGAGCGGACGCGTGAGGG AGGGTGATCGTGGCCGGTAAGCTCAGGGCGCAGCGTGCGAAAGCGATGAA ATTCCGCGATGGCTACATGATCAAGAGCGGACGCGTGAGGGAGGATTATG TGGACCACGCTGTTCGGCACGTGATGATGCGTCAGGGTGTGCTGGGTGTT ACGGTTTCCATCATGCTTCCCCACGACCCTACGATTATGTGGACCACGCT GTTCGGCACGTGATGATGCGTCAGGGTGTGCTGGGTGTTACGGTTTCCAT CATGCTTCCCCACGACCCTACGGGCAAGGAGGGCCCGAAGACTCCTCTGT CGGACGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGTT ACCCCCAACTTCGGTTGAGGCAAGGAGGGCCCGAAGACTCCTCTGTCGGA CGTGATCACCATCTTGCCGCCCAAGGAAGAAATTGCGTTGGAGGTTACCC CCAACTTCGGTTGA back to top
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