|
Homology
BLAST of mRNA_F-serratus_M_contig97.21004.1 vs. uniprot
Match: A0A7S2UX76_9STRA (Mitogen-activated protein kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX76_9STRA) HSP 1 Score: 413 bits (1061), Expect = 2.830e-139 Identity = 206/370 (55.68%), Postives = 263/370 (71.08%), Query Frame = 1
Query: 7 RKFHKVSVGRETFEIDTRYKNLKPIGDGSYGFVCSADDELDGRQVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDMKPSNLLVNANCDLAICDFGLARGVELEYEDE---LTEYVVTRWYRAPELLCDSTHYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEELTFVTHPAARKAI--LSKANPTTKDLESYFPTDSSPLALDLLRRMLVFHPEHRITVDEALEHAYLADLHGQMTEPTCPELFDFEYERIFGTA--TIPKDELQKIMFRDMLHFSGTRAAED 1095
+ F+ V VGR+TF+ID RY L+PIG G+YG+VCSA D++ VAIKKV + F DLVDAKRI+RE+K LRHF H NI + DIMT+PP + DFRD+YIVTNLMESD++RII SGQ L DQHF+YF+YQ+LRGLKFIHS NVLHRD+KPSN+LVNANCDL ICDFGL+R +E E + LTEYVVTRWYR+PELL + YG+ VD+WSVGCI AEM++R F+G NP QL+ I+ LG P EE++ F+ P +R I + + L +Y P P A+DLL RMLVF+P+ RI+V+EAL H YL + G EP C DFE+ER+ A IPK ++Q +++ +MLH+ ED
Sbjct: 16 KNFYTVEVGRDTFQIDRRYTELRPIGAGAYGYVCSAHDQVTNSSVAIKKVSNCFRDLVDAKRILREVKSLRHFGTHPNITTLIDIMTVPPYSVDFRDIYIVTNLMESDLERIITSGQVLGDQHFKYFLYQILRGLKFIHSVNVLHRDLKPSNILVNANCDLNICDFGLSRAIEACDEAQDIGLTEYVVTRWYRSPELLLGAAQYGQEVDIWSVGCIMAEMMNRVALFRGKNPLDQLKRILVHLGCPSEEDMQFLD-PDSRAEISRFGRKQQPPQPLSTYLPNSIDPQAVDLLSRMLVFNPQQRISVEEALHHPYLEEFGGMFDEPVCTTPLDFEFERLAMDARGAIPKAQVQALLYNEMLHYRPLSGLED 384
BLAST of mRNA_F-serratus_M_contig97.21004.1 vs. uniprot
Match: A0A812LSE0_9DINO (Mitogen-activated protein kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LSE0_9DINO) HSP 1 Score: 405 bits (1040), Expect = 2.230e-131 Identity = 205/344 (59.59%), Postives = 250/344 (72.67%), Query Frame = 1
Query: 67 NLKPIGDGSYGFVCSADDELDGRQVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDMKPSNLLVNANCDLAICDFGLARGVELEYEDELTEYVVTRWYRAPELLCDSTHYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEELTFVTHPAARKAILS---KANPTTKDLESYFPTDSSPLALDLLRRMLVFHPEHRITVDEALEHAYLADLHGQMTEPTCPELFDFEYERIFGTATIPKDELQKIMFRDMLHFSGTRAA 1089
NLKPIG G+YG V SADD + GR+VAIKKV VF DL+DAKRI+RE+KLLRH H+NII I DIMT PP+T DF +YIVT L E D++RI+ S QPLTDQH+QYF++Q+LRGLK+IHSANVLHRD+KPSNLLVNANCDL ICDFGLARGV E E +LTEYVVTRWYRAPELLC++ YG VDVWS GCIF E+L+RRP F+G + QLE IVS LG P +EL VT A + I S + T +D + FP +S ALDLL RML F P+ RI + +AL H +L DLH + EP C +FDFEYE+ + +P+ LQK M+ +M+ + R A
Sbjct: 2 NLKPIGKGAYGLVASADDLITGRKVAIKKVSRVFQDLIDAKRILRELKLLRHLGHHDNIIEIVDIMTGPPETEDFHTLYIVTKLFECDLERIVTSAQPLTDQHYQYFLFQLLRGLKYIHSANVLHRDLKPSNLLVNANCDLCICDFGLARGVSAETEGQLTEYVVTRWYRAPELLCEAETYGAGVDVWSAGCIFGELLARRPLFKGKSTSKQLELIVSTLGTPTADELKKVTSRGALQLIQSLPPRKKITLEDWKKIFP-QASEQALDLLHRMLQFDPDKRINLLDALAHPFLKDLHAKAREPLCESVFDFEYEKDYPDE-MPQSLLQKYMYEEMVALTAAREA 343
BLAST of mRNA_F-serratus_M_contig97.21004.1 vs. uniprot
Match: A0A3R6ZVW3_9STRA (Mitogen-activated protein kinase (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZVW3_9STRA) HSP 1 Score: 386 bits (991), Expect = 9.250e-127 Identity = 191/318 (60.06%), Postives = 243/318 (76.42%), Query Frame = 1
Query: 124 LDGRQVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDMKPSNLLVNANCDLAICDFGLARGVELEYEDELTEYVVTRWYRAPELLCDSTHYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEELTFVTHPAARKAILSKANPTTKDLESYFPTDSSPLALDLLRRMLVFHPEHRITVDEALEHAYLADLHGQMT--EPTCPELFDFEYER--IFGTATIPKDELQKIMFRDML 1065
L GR+VAIKK+ DVF DL DAKRI+RE+KLL+H HENII I D++ +PP+TT+F D+YIVT+LMESD++RII+S Q L+D HFQYF+YQ+LRG KFIHSANVLHRD+KPSNLLVN+NCDL+ICDFGLARGVEL + ++LTEYVVTRWYRAPELL D +YG VD+W+VGCIFAEML RRPFF G +P QL IV ILG P +E+ FVTH AA+KAI +FP +++PLA+DLL RML F P++RITV +ALEH YL LH ++ EP F+F++ER + +PK+ELQ +++ + +
Sbjct: 256 LRGRKVAIKKITDVFDDLTDAKRILREMKLLKHLGAHENIINILDVILIPPNTTNFDDIYIVTDLMESDLERIISSTQTLSDAHFQYFLYQILRGTKFIHSANVLHRDLKPSNLLVNSNCDLSICDFGLARGVELSHNEDLTEYVVTRWYRAPELLTDCQNYGNAVDMWAVGCIFAEMLKRRPFFTGKDPSDQLHMIVRILGSPTPDEMMFVTHEAAKKAITQHGY-----YPKFFP-EANPLAIDLLARMLKFSPDNRITVTQALEHPYLTQLHNPVSADEPVATSAFNFDFERESLDQGVEMPKNELQHLVYLESM 567
BLAST of mRNA_F-serratus_M_contig97.21004.1 vs. uniprot
Match: A0A485LIZ0_9STRA (Mitogen-activated protein kinase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LIZ0_9STRA) HSP 1 Score: 378 bits (970), Expect = 5.260e-126 Identity = 193/353 (54.67%), Postives = 249/353 (70.54%), Query Frame = 1
Query: 16 HKVSVGRETFEIDTRYKNLKPIGDGSYGFVCSADDELDGRQVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDMKPSNLLVNANCDLAICDFGLARGVELEYED-ELTEYVVTRWYRAPELLCDSTHYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEELTFVTHPAARKAILSKANPTTKDLESYFPTDSSPLALDLLRRMLVFHPEHRITVDEALEHAYLADLHGQMTEPTCPELFDFEYERIFGTATIPKDELQKIMFRDMLHF 1071
H V TF++DT+YK +KPIG G+YG V SA + G +VAIKKV F DL+DAKRI+REIKLL+HFD HENII I D++ PP + F DVYI+++LME+D+ RII S QPL+D H QYF+YQ+LR LK+IHS++VLHRD+KPSNLL+N+NCDL +CDFGLARGVE + ++ ELTEYVVTRWYRAPE++ + Y K +D+WS GCIFAE+L R+P F G + HQL+ I LG P EEEL FVT AR+ + S+ N LE FP + P ALDLL +MLVF P RI+V+EALEH YL LH EP + F FE+E+ + K LQ+++ ++ F
Sbjct: 29 HSFVVSGTTFQVDTKYKFIKPIGHGAYGVVISAQNTETGDKVAIKKVSKAFEDLIDAKRILREIKLLQHFD-HENIITIVDLLP-PPSVSHFEDVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSSVLHRDLKPSNLLLNSNCDLKVCDFGLARGVEPDEDNMELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPSEEELHFVTSEKARRFMKSQPNKPKIPLEKLFP-NVKPNALDLLDKMLVFDPTKRISVEEALEHPYLESLHNNDDEPKSTKPFSFEFEK----ENLTKRRLQELISEEVCRF 374
BLAST of mRNA_F-serratus_M_contig97.21004.1 vs. uniprot
Match: W4GU97_9STRA (Mitogen-activated protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU97_9STRA) HSP 1 Score: 374 bits (960), Expect = 1.190e-125 Identity = 177/261 (67.82%), Postives = 214/261 (81.99%), Query Frame = 1
Query: 4 GRKFHKVSVGRETFEIDTRYKNLKPIGDGSYGFVCSADDELDGRQVAIKKVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDVYIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDMKPSNLLVNANCDLAICDFGLARGVELEYEDELTEYVVTRWYRAPELLCDSTHYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEELTFVTHPAARKAI 786
G FH V+V R+ FE+ + Y NL+PIG GSYG V SA+D L GR+VAIKK+ DVF DL DAKRI+RE+KLL+H HENII I D++ +PP+TT+F D+YIVT+LMESD++RII+S Q L+D HFQYF+YQ+LRG KFIHSANVLHRD+KPSNLLVN+NCDL+ICDFGLARGVEL + ++LTEYVVTRWYRAPELL D +YG VD+W+VGCIFAEML RRPFF G +P QL IV ILG P +E+ FVTH AA+KAI
Sbjct: 10 GPDFHCVTVSRDMFEVRSHYTNLRPIGGGSYGIVVSAEDTLRGRKVAIKKITDVFDDLTDAKRILREMKLLKHLGAHENIINILDVILIPPNTTNFDDIYIVTDLMESDLERIISSTQTLSDAHFQYFLYQILRGTKFIHSANVLHRDLKPSNLLVNSNCDLSICDFGLARGVELSHNEDLTEYVVTRWYRAPELLTDCQNYGNAVDMWAVGCIFAEMLKRRPFFTGKDPSDQLHMIVRILGSPTPDEMMFVTHEAAKKAI 270
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 473.8 |
Seed ortholog evalue | 7.9e-131 |
Seed eggNOG ortholog | 44056.XP_009040213.1 |
Preferred name | MPK6 |
KEGG ko | ko:K04371,ko:K04464,ko:K14512,ko:K20535,ko:K20536,ko:K20537,ko:K20600 |
KEGG Pathway | ko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04138,ko04139,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05206,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,ko05418,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04138,map04139,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05206,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231,map05418 |
KEGG Module | M00687,M00690 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000165,GO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000302,GO:0000910,GO:0000911,GO:0001101,GO:0002218,GO:0002252,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0005856,GO:0006464,GO:0006468,GO:0006725,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006971,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007389,GO:0007568,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009314,GO:0009403,GO:0009404,GO:0009409,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009504,GO:0009524,GO:0009555,GO:0009574,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009620,GO:0009627,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009682,GO:0009700,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009734,GO:0009737,GO:0009738,GO:0009751,GO:0009753,GO:0009755,GO:0009791,GO:0009814,GO:0009856,GO:0009861,GO:0009862,GO:0009863,GO:0009864,GO:0009867,GO:0009868,GO:0009908,GO:0009914,GO:0009987,GO:0010015,GO:0010033,GO:0010035,GO:0010051,GO:0010101,GO:0010102,GO:0010120,GO:0010150,GO:0010183,GO:0010200,GO:0010224,GO:0010229,GO:0010243,GO:0010311,GO:0010468,GO:0010817,GO:0012505,GO:0014070,GO:0015630,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019748,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022622,GO:0023014,GO:0023052,GO:0030865,GO:0031122,GO:0031347,GO:0031349,GO:0031984,GO:0032260,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032870,GO:0033206,GO:0033554,GO:0033993,GO:0034641,GO:0035556,GO:0035670,GO:0035690,GO:0035821,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0042430,GO:0042435,GO:0042493,GO:0042539,GO:0042542,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043622,GO:0044003,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0045087,GO:0045088,GO:0045089,GO:0046217,GO:0046483,GO:0046677,GO:0047484,GO:0048229,GO:0048232,GO:0048285,GO:0048364,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048481,GO:0048518,GO:0048527,GO:0048528,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0048868,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050826,GO:0050832,GO:0050896,GO:0050918,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052167,GO:0052169,GO:0052173,GO:0052200,GO:0052255,GO:0052306,GO:0052308,GO:0052314,GO:0052315,GO:0052317,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0060255,GO:0060918,GO:0061458,GO:0061640,GO:0065007,GO:0065008,GO:0070887,GO:0071215,GO:0071229,GO:0071236,GO:0071310,GO:0071365,GO:0071395,GO:0071396,GO:0071407,GO:0071446,GO:0071495,GO:0071704,GO:0071840,GO:0075136,GO:0080026,GO:0080134,GO:0080135,GO:0080136,GO:0090567,GO:0090693,GO:0090696,GO:0090697,GO:0090698,GO:0097305,GO:0097306,GO:0097435,GO:0098542,GO:0098791,GO:0099402,GO:0140013,GO:0140096,GO:1901000,GO:1901002,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901700,GO:1901701,GO:1902410,GO:1903046,GO:1903047,GO:1905392,GO:1905393 |
EggNOG free text desc. | MAP kinase activity |
EggNOG OGs | KOG0660@1,KOG0660@2759 |
Ec32 ortholog description | Mitogen-activated protein kinase |
Ec32 ortholog | Ec-10_001290.1 |
EC | 2.7.11.24 |
COG Functional cat. | H |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147 |
Exons | 8 |
Model size | 1176 |
Cds size | 1176 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932745.3454757-CDS-F-serratus_M_contig97:57893..58115 | 1622932745.3454757-CDS-F-serratus_M_contig97:57893..58115 | Fucus serratus male | CDS | F-serratus_M_contig97 57894..58115 - |
1690964452.960551-CDS-F-serratus_M_contig97:57893..58115 | 1690964452.960551-CDS-F-serratus_M_contig97:57893..58115 | Fucus serratus male | CDS | F-serratus_M_contig97 57894..58115 - |
1622932745.3611019-CDS-F-serratus_M_contig97:58382..58460 | 1622932745.3611019-CDS-F-serratus_M_contig97:58382..58460 | Fucus serratus male | CDS | F-serratus_M_contig97 58383..58460 - |
1690964452.9753973-CDS-F-serratus_M_contig97:58382..58460 | 1690964452.9753973-CDS-F-serratus_M_contig97:58382..58460 | Fucus serratus male | CDS | F-serratus_M_contig97 58383..58460 - |
1622932745.3816297-CDS-F-serratus_M_contig97:58745..58940 | 1622932745.3816297-CDS-F-serratus_M_contig97:58745..58940 | Fucus serratus male | CDS | F-serratus_M_contig97 58746..58940 - |
1690964452.9916756-CDS-F-serratus_M_contig97:58745..58940 | 1690964452.9916756-CDS-F-serratus_M_contig97:58745..58940 | Fucus serratus male | CDS | F-serratus_M_contig97 58746..58940 - |
1622932745.3942363-CDS-F-serratus_M_contig97:59216..59346 | 1622932745.3942363-CDS-F-serratus_M_contig97:59216..59346 | Fucus serratus male | CDS | F-serratus_M_contig97 59217..59346 - |
1690964453.0025644-CDS-F-serratus_M_contig97:59216..59346 | 1690964453.0025644-CDS-F-serratus_M_contig97:59216..59346 | Fucus serratus male | CDS | F-serratus_M_contig97 59217..59346 - |
1622932745.4074233-CDS-F-serratus_M_contig97:60636..60791 | 1622932745.4074233-CDS-F-serratus_M_contig97:60636..60791 | Fucus serratus male | CDS | F-serratus_M_contig97 60637..60791 - |
1690964453.011547-CDS-F-serratus_M_contig97:60636..60791 | 1690964453.011547-CDS-F-serratus_M_contig97:60636..60791 | Fucus serratus male | CDS | F-serratus_M_contig97 60637..60791 - |
1622932745.4495995-CDS-F-serratus_M_contig97:61263..61536 | 1622932745.4495995-CDS-F-serratus_M_contig97:61263..61536 | Fucus serratus male | CDS | F-serratus_M_contig97 61264..61536 - |
1690964453.0215034-CDS-F-serratus_M_contig97:61263..61536 | 1690964453.0215034-CDS-F-serratus_M_contig97:61263..61536 | Fucus serratus male | CDS | F-serratus_M_contig97 61264..61536 - |
1622932745.5667996-CDS-F-serratus_M_contig97:63890..63954 | 1622932745.5667996-CDS-F-serratus_M_contig97:63890..63954 | Fucus serratus male | CDS | F-serratus_M_contig97 63891..63954 - |
1690964453.031936-CDS-F-serratus_M_contig97:63890..63954 | 1690964453.031936-CDS-F-serratus_M_contig97:63890..63954 | Fucus serratus male | CDS | F-serratus_M_contig97 63891..63954 - |
1622932745.598825-CDS-F-serratus_M_contig97:64146..64205 | 1622932745.598825-CDS-F-serratus_M_contig97:64146..64205 | Fucus serratus male | CDS | F-serratus_M_contig97 64147..64205 - |
1690964453.0426288-CDS-F-serratus_M_contig97:64146..64205 | 1690964453.0426288-CDS-F-serratus_M_contig97:64146..64205 | Fucus serratus male | CDS | F-serratus_M_contig97 64147..64205 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21004.1 >prot_F-serratus_M_contig97.21004.1 ID=prot_F-serratus_M_contig97.21004.1|Name=mRNA_F-serratus_M_contig97.21004.1|organism=Fucus serratus male|type=polypeptide|length=392bp
MGRKFHKVSVGRETFEIDTRYKNLKPIGDGSYGFVCSADDELDGRQVAIK KVGDVFSDLVDAKRIVREIKLLRHFDGHENIIAIADIMTMPPDTTDFRDV YIVTNLMESDMDRIIASGQPLTDQHFQYFIYQVLRGLKFIHSANVLHRDM KPSNLLVNANCDLAICDFGLARGVELEYEDELTEYVVTRWYRAPELLCDS THYGKTVDVWSVGCIFAEMLSRRPFFQGHNPHHQLETIVSILGRPPEEEL TFVTHPAARKAILSKANPTTKDLESYFPTDSSPLALDLLRRMLVFHPEHR ITVDEALEHAYLADLHGQMTEPTCPELFDFEYERIFGTATIPKDELQKIM FRDMLHFSGTRAAEDPPSTDIAERLIRSTLSEKKDDREDDR* back to topmRNA from alignment at F-serratus_M_contig97:57894..64205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig97.21004.1 ID=mRNA_F-serratus_M_contig97.21004.1|Name=mRNA_F-serratus_M_contig97.21004.1|organism=Fucus serratus male|type=mRNA|length=6312bp|location=Sequence derived from alignment at F-serratus_M_contig97:57894..64205- (Fucus serratus male) ATGGGCAGGAAGTTTCATAAAGTGTCCGTGGGCCGCGAAACCTTTGAAAT
TGACACAAGGTACGGTCTTATACAGTAGTACAACTATTCTACGTAAGACA
TAGTCCCTTCGAGCGTACATCATGATTCCCTGCTGTGCATGATACCATTT
TTGAGGAATTCTCGTAGCTCTGGTTTTCGGTTTCCACCACCCCAACGCAA
CTTGCCCCCCTTTTCGACCTGGAATGTGATGATCACCCCTCGCCCTCGAA
GGTACAAGAACCTCAAGCCTATCGGGGATGGATCTTACGGATTTGTTTGC
TCCGCCGATGACGAGGTCAGCCAGCCTCGAACATTCGATTTATCCAAGAC
GGAGTTTATTATACTCGTACAGAATACGCTCTATGTTCGGGCAAGGATTG
CAAGTACTCGTACCTGACCCACAGCGGGCACACGACTGTTTCCCCTACTT
CCGTAGTCGGTGGTCTTTCTAGTTCCTGAATGCCTTGAGCAATACATTGG
GATCCAATACAAATGCGATTCTTTCGTTTCTGTGACTGTCAAGAGCCGGT
GAATACTGGACTGCCGAACCTGTCTCGGCTGATCAAATTATCAGGCACCT
CGTTTTCCTTGTTCAGCTGACCGCGGGTAAATCGGTATGTGCCCGGTCTG
CTAGTCTGCTACTTGTGATGGTTACACCTGCGTGTGAGTGTGTGTTCCTG
GCACATTGACCGTCCGGGGCTCAACAGAGATATATTTACTCTGTACCTGC
ACCCGTACCAATGAATATGAAAGGAAAGTTCAATACAGGTGCACGCAATG
TAACAAAGTGAGCTGTAATCCAAACTTATAGCGTCTTCTGTTTTTGTTTT
GTTTCTTGGTGTCCCTGCACCATGGCGATCAACGTAATTGTACAGAGAGT
ATAACGGTGGGTTTCTCCCCGACATTTTACTGTTGACCCAAGCCCCTATT
TTGTACTGGTATGGTTCGATGACACTATTATCGTATTTACACAGTATCTT
CTGTTTTGTTCAGGCTCTGCATGGTGATTAATGCAAGTGTACAGCAGTAT
AACGGTGGGCTTCTCCCTGACATTATGCTACTGTACGCCGGTACTTTCGA
CATGCCCACTTCATGCCGTTAGTGGGTGTGGGAAAGAGAGGCGAATATCA
ATTGGTCCATGGTGACCTGCCAAGCGCAGCACTCGTTCGGAACTAACTTG
AGGTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTA
CGCAATCGGGTGGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGC
GGTTTCATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTA
AGCACCAGATTTAGCCTGAGTATGGAGATGAGCAGGCCGACGCGGGACGG
GACGACTGAACCCATCTCGCGAGACCAAATTCTCAGACCCGTGCGGGGAC
AGGGGAATATTAAGTTTATTTTCCCTGTTCAGCTGACCACGGGCAGGATT
GGCAACCTTACTCGGTTGATCCATACTCTTGCTATAGTATATACATACAT
ACTGTTGACCAAAGGTTACTACCATCGGGGAACCCGTTTAAATACCATGT
AGGGGCTTTGTCTTTACAGCCTATGTAACAGTATATTATTACTACCATGT
TTGATGATGCACTACATTGTTTTTGTTTTTGCTGTTTTTCTGGTGTCCCT
TCCCTGCATGGCGATTAATGTTAGTGTATGGTCACACATGTAGGAGAGTA
TGGATCAGCCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGG
GAAAATGGATATTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCCCGC
GAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACT
CAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCG
GCGTCCATATAATTATAATCAACCGCCATGCGCCATCGGGTTAGTCCCAA
GTTTATCGGGTCACGCAATTACGTACCGATGGTGTTCACTGCCGAGAGTC
CGCCGGCACAGGGCCAGTAAAACTTAAGGTAGTTCCGAACAAGTGCTGCC
TTGGCAGGTCACCATGGACTAATTATTATACGCCTCTCTTTCCCACACCC
ACTTTTGGTATGAAGTGGCCGTGTTGAAAGTACCGGCGTGTGTACAATAT
AATGGTGGGCTTCTCCCCGAAATTATACTGTTGACCTAATGTTACTACCA
TCGGGGAACCCGTTTAAATGCCATGAAAAGGTTTTGTATTTGCAGGCTAT
AATCCCACCTACCCCGGTAAACGTTTTGACATTTTCCCCCCTGACTGGGG
TATAGTATAGTATAGTATAGTATAGTATAGTATGCTCAGAAGGTCTAGGC
GGTTTCTGATTTTTCTTTCAAGTACACACAATCGCAAGACCGCAACAGCA
TTGTAATTATATACTATGCTTTACTATTGTTACTATCAATACTGCATGTA
GGAGTATCTCCGGATTTGTTTTACCGGCGTCACGAAGCATTCGGTCAAAA
GTCGTTTAGTGGAAGTAATCTTACAACTTCTGATTTTATTTTGTCCGGTA
CTCAAAAAGGCGACCAAAAGAATCCCGGGACACCTTGCCCCGAACCGTTA
TCGCCGGTCATCTTACCAGCTGGATGGGCGACAGGTGGCCATTAAAAAGG
TTGGGGACGTTTTCAGCGACCTAGTGGATGCGAAGCGCATCGTGCGGGAG
ATCAAGCTGCTTCGACACTTTGATGGACATGAGAATATTATCGCCATCGC
CGACATCATGACAATGCCTCCGGACACTACAGACTTCAGGGACGTTTACA
TCGTGACAAATCTAATGGAATCCGACATGGACAGAATCATCGCCTCAGGG
CAGCCGCTTACCGACCAGCACTTCCAGTATTTCATTTACCAGGTGATAAT
GGAATGATAACGTGTGGTCCGGGCGATAGACATCTTCACGATAGACAACG
CACGTCGAGCTTAGAGCTTAGAGCTTAGAGCTATACCGGTATGTACGACC
TTCCATGGTTCATAATCTTGATCCCAAAGTTATGAGAGGATGCTTCAATG
GAGCCGTATTGTCATTCCAACGGACGAATTTGAGACCAAAAGTTCAATGC
TATAAATAGCGCCTCGTAACGCATCATTTATCCAAAGCGGGTCGGAAAGT
AGAGATATTATCAATAATTAGCTGTGTGTTAGAAAAGAGATGCGTGCTAT
AGTGACGCGTATCATGGCGGCACCCTCTAGCCACGGGCCGGCCTGCGCCA
TAGCCTTTTGCTGTAGTGCAACGGTCTTGTCCGGTGTCCAATACCTCAGA
CATATCTAACGTTACTGTCGTAGAAATCGCCACCGCGGTCGTTCGGTCTG
TTCGCCATATGTAGGTGCTCCGTGGGCTGAAGTTCATCCACAGCGCCAAC
GTTTTACATCGAGACATGAAGCCGTCGAACCTGCTGGTGAACGCGAACTG
CGATCTTGCTATCTGTGACTTCGGCCTTGCAAGGGGAGTCGAACTGGAGT
ACGAAGACGAACTGACAGAGTATGTATGATGTACGGTGTTGTACAATGTC
CCTCTCTTAATTTACTTATTGCATTATCTACTCGCACAGCACGCCCTATC
GTATACTTGGTGCTCCGTATGGATAGCCAGTACAGCGTAACTTCCTCTGA
TAGCCTTGGTAACGTTGTACCTATACCTGGTACATGTTTTCACTACCACG
GGGGGGGATGTCAATGGGGATGATTAGCTTACTAGTAATAGTAATAAGCA
CACGTTTGCCTGTGAGGGGGAGTGATAGTCTAGTACCATATCTGGTACTC
GAGTACTTATATATGAAGATGATTGAGTGATGTTCCCTATTCAGAAGTTT
AAACGAGTGTGTGACGTGCATACGTGTTTAGTCACATCGATCGATGCAGC
CCCAACAATATCGGTGTCTTCTATCATACTGTATTGACAGTCTCTAGACC
GGTACAAGTACTTTACGGGCTTGTAAATCCCATGCAATCTGCTTGGCAGA
AGAAATAAGAAAAAGTGGAGAAACAAGTGGTACTTAGAAACGTCCAATAC
TGTACATTTTTGCCTCGGAGGCTGTAAGGAGCCGAGGCGCCACGTGTTTG
TTGAATAGTCACTATTAATATGAGAAATAGTTCGCCCCAAACAAGAGAAC
AGATTGAAAACTCCGAACAGGATCTAGCCCTTTGAACATCACATCAACAC
CTGCGGGACACCTACGTGAAACGCAGGAGAATATCTTAATGTGTTCACAG
AAACAATTGAACGCATCTATTAATCGACATGTACCAGTATACCCTATTGT
TTTTGGTCTTGAAGCTACAGGAAAACTCTGCGTGCACCATCTACAGCACA
GTAGCGATATTTTTGTTGAGATTTGACCAGAGTTTATCTCTTCGGAACTA
CGCAGAACTATACCAGGCATACAGCAACCGGGGTGGGATTGTAATTCTTG
GACTGGGGGTATCTTGTACAGTATAATCCCGTGTGATATCTTTAATGCGA
GGATTTGCGTCCCCGGTCCCCGGTGTGTGAGGAGGGGGCCATTTAAACTC
TTTGCCACCTCCCGTTATAGGAATCTAATTTGAATTATCGATATTGAATT
GATCTGGGAGGGGCGGCGGTGGGCGGTTTGGGCGGAGCGTGCCCTACATT
TTGATTCGAGACAAGACACGGAGTGCGTTCGTCGGCTAGAAGCCTGCTCT
CTCAAAGGGGGTAACATAAATAATGATTGCACCTCACGCTTGGTCCTTCC
CCGCCTTTCGCCTTTCGCCTTCTGCTGATTTTATCTCTCGTGGACGAACC
CTGAGGCAGGTACGTAGTAACTCGGTGGTACCGGGCGCCCGAGCTCCTAT
GTGATTCCACGCACTACGGCAAGACCGTGGATGTTTGGAGCGTGGGTTGC
ATATTTGCGGAAATGCTGTCGCGGCGCCCATTTTTCCAGGTGACCGCTTT
ATGCCATTGGCGACAGTTGTAGCAAAGATACCCTCCACATTATGGTTGAA
ATACAGTGTATGGGTATCAAATCAGCTCGAGTTTTGACTATCTTCCGATC
GTTGACGGTGACGATCTCTCTTTTTAGTTTAATAATATAATAGTAGAAAC
GTCGGCCCTTGCGCACCAGCCTGAAGGCAACTCAAACCTTGCGCACCGTT
TCTCGAGTAGCCCGAGTTTTTTTTACCCACCCGCCTGACGCCGTGTCAAC
CTTGATGACGCACAGGGTCACAACCCGCACCATCAGTTGGAGACCATCGT
GTCGATACTTGGGCGGCCACCTGAGGAGGAGCTGACGTTTGTTACGCACC
CAGCTGCACGGAAGGCTATCCTGTCCAAGGCAAATCCCACGACGAAAGAT
CTGGAGTCATACTTCCCAACCGACTCTTCGCCGTTAGCGTTGGACTTACT
TCGACGTATGGTAAGGGGTTGCTTTCTCTGAAGCAAAGGAATATCGAATA
TCGAAACGAGCAGTATTCCCTCTTCGTATTTTTAAAGACCGTCGACTTCG
CTTCCACTTGTTTTTTTAAGTTCTTCCGAGCCCTGAATTGTTGACTTTAT
TCCACGTTTAAGATAAATGTTGACATCTGCCGGCTGTCGTCTGTAACAAG
GCTACATTTTACTACTGCTTGGGCGACCATCGACGTACAGTAAGTACGGT
AGCTACTTTTAAACAATCGCCCTATATGCATATTACCCGTCGCAGCTGGT
GTTTCATCCAGAACATCGAATTACCGTCGACGAAGCGTTGGAGCACGCGT
ATCTCGCCGACCTCCATGGGCAGGTGAAATTCAACAAAGATATCACGAGC
ATGTGCTTGACTTCCCTTTCTCTCGAAGGCGAACTTTTTTTACTGTAGCG
TTTATTCGACCCGAGCACAGTTTAATGAAATTTTCCTCGAGAAAGGGTTG
GCGGCGGGTGCCGTCGGAGCAATAATCAACCACATCGGCCCTACGCGTGA
ACCAGCTGATAGCGTAACATGTGCTTCGACGATAACATATTAAAATATAA
TGTCCACCACTGTCCTTGTTTTCATGCCGCATCTTCTCAGATGACGGAGC
CGACCTGTCCGGAGCTGTTCGACTTCGAATACGAGCGCATCTTCGGTACC
GCGACAATACCAAAGGACGAGCTGCAGAAGATCATGTTCCGCGACATGCT
GCACTTCTCGGGCACTCGGGCTGCAGAAGATCCTCCCTCCACGGATATAG
CGGAACGACTGATTCGTAGCACTTTGTCTGAAAAGAAAGATGATCGCGAA
GACGATAGATGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig97:57894..64205- >mRNA_F-serratus_M_contig97.21004.1 ID=mRNA_F-serratus_M_contig97.21004.1|Name=mRNA_F-serratus_M_contig97.21004.1|organism=Fucus serratus male|type=CDS|length=2352bp|location=Sequence derived from alignment at F-serratus_M_contig97:57894..64205- (Fucus serratus male) ATGGGCAGGAAGTTTCATAAAGTGTCCGTGGGCCGCGAAACCTTTGAAAT TGACACAAGATGGGCAGGAAGTTTCATAAAGTGTCCGTGGGCCGCGAAAC CTTTGAAATTGACACAAGGTACAAGAACCTCAAGCCTATCGGGGATGGAT CTTACGGATTTGTTTGCTCCGCCGATGACGAGGTACAAGAACCTCAAGCC TATCGGGGATGGATCTTACGGATTTGTTTGCTCCGCCGATGACGAGCTGG ATGGGCGACAGGTGGCCATTAAAAAGGTTGGGGACGTTTTCAGCGACCTA GTGGATGCGAAGCGCATCGTGCGGGAGATCAAGCTGCTTCGACACTTTGA TGGACATGAGAATATTATCGCCATCGCCGACATCATGACAATGCCTCCGG ACACTACAGACTTCAGGGACGTTTACATCGTGACAAATCTAATGGAATCC GACATGGACAGAATCATCGCCTCAGGGCAGCCGCTTACCGACCAGCACTT CCAGTATTTCATTTACCAGCTGGATGGGCGACAGGTGGCCATTAAAAAGG TTGGGGACGTTTTCAGCGACCTAGTGGATGCGAAGCGCATCGTGCGGGAG ATCAAGCTGCTTCGACACTTTGATGGACATGAGAATATTATCGCCATCGC CGACATCATGACAATGCCTCCGGACACTACAGACTTCAGGGACGTTTACA TCGTGACAAATCTAATGGAATCCGACATGGACAGAATCATCGCCTCAGGG CAGCCGCTTACCGACCAGCACTTCCAGTATTTCATTTACCAGGTGCTCCG TGGGCTGAAGTTCATCCACAGCGCCAACGTTTTACATCGAGACATGAAGC CGTCGAACCTGCTGGTGAACGCGAACTGCGATCTTGCTATCTGTGACTTC GGCCTTGCAAGGGGAGTCGAACTGGAGTACGAAGACGAACTGACAGAGTG CTCCGTGGGCTGAAGTTCATCCACAGCGCCAACGTTTTACATCGAGACAT GAAGCCGTCGAACCTGCTGGTGAACGCGAACTGCGATCTTGCTATCTGTG ACTTCGGCCTTGCAAGGGGAGTCGAACTGGAGTACGAAGACGAACTGACA GAGTACGTAGTAACTCGGTGGTACCGGGCGCCCGAGCTCCTATGTGATTC CACGCACTACGGCAAGACCGTGGATGTTTGGAGCGTGGGTTGCATATTTG CGGAAATGCTGTCGCGGCGCCCATTTTTCCAGGTACGTAGTAACTCGGTG GTACCGGGCGCCCGAGCTCCTATGTGATTCCACGCACTACGGCAAGACCG TGGATGTTTGGAGCGTGGGTTGCATATTTGCGGAAATGCTGTCGCGGCGC CCATTTTTCCAGGGTCACAACCCGCACCATCAGTTGGAGACCATCGTGTC GATACTTGGGCGGCCACCTGAGGAGGAGCTGACGTTTGTTACGCACCCAG CTGCACGGAAGGCTATCCTGTCCAAGGCAAATCCCACGACGAAAGATCTG GAGTCATACTTCCCAACCGACTCTTCGCCGTTAGCGTTGGACTTACTTCG ACGTATGGGTCACAACCCGCACCATCAGTTGGAGACCATCGTGTCGATAC TTGGGCGGCCACCTGAGGAGGAGCTGACGTTTGTTACGCACCCAGCTGCA CGGAAGGCTATCCTGTCCAAGGCAAATCCCACGACGAAAGATCTGGAGTC ATACTTCCCAACCGACTCTTCGCCGTTAGCGTTGGACTTACTTCGACGTA TGCTGGTGTTTCATCCAGAACATCGAATTACCGTCGACGAAGCGTTGGAG CACGCGTATCTCGCCGACCTCCATGGGCAGCTGGTGTTTCATCCAGAACA TCGAATTACCGTCGACGAAGCGTTGGAGCACGCGTATCTCGCCGACCTCC ATGGGCAGATGACGGAGCCGACCTGTCCGGAGCTGTTCGACTTCGAATAC GAGCGCATCTTCGGTACCGCGACAATACCAAAGGACGAGCTGCAGAAGAT CATGTTCCGCGACATGCTGCACTTCTCGGGCACTCGGGCTGCAGAAGATC CTCCCTCCACGGATATAGCGGAACGACTGATTCGTAGCACTTTGTCTGAA AAGAAAGATGATCGCGAAGACGATAGATGAATGACGGAGCCGACCTGTCC GGAGCTGTTCGACTTCGAATACGAGCGCATCTTCGGTACCGCGACAATAC CAAAGGACGAGCTGCAGAAGATCATGTTCCGCGACATGCTGCACTTCTCG GGCACTCGGGCTGCAGAAGATCCTCCCTCCACGGATATAGCGGAACGACT GATTCGTAGCACTTTGTCTGAAAAGAAAGATGATCGCGAAGACGATAGAT GA back to top
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