mRNA_F-serratus_M_contig967.20994.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig967.20994.1
Unique NamemRNA_F-serratus_M_contig967.20994.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.300e-52
Identity = 130/305 (42.62%), Postives = 163/305 (53.44%), Query Frame = 2
Query:  113 QFHVCPFVLRQRMDK-------GXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKEL-------RVLEARGRGLLEITTLVSGNHRKTNNPRA 985
            +FHVCP + R+RM                       CPG+A+++ Q  TGVCYFNMR  +  G  V+QRSYNA AVRV   +       P P                               A  +L      GS   D G       G + VVPA ++ EG LC+EMRIRLY  GAMSKLL+RL KD+ N  VQLQGPF++  L P PAHRNV+MIAAGTGINPM+Q IR+Y +     A   + RSR+AL+ Q TS +DLY  +E+       R+ EA+  GLLE+T L+SG HRK N P A
Sbjct:  715 RFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLPQNITGVCYFNMRA-QEKGNGVIQRSYNAYAVRVRDTN-------PTP------------------------------TAGGMLMGGLSHGS---DKGA------GTLIVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGA 970          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.450e-52
Identity = 130/298 (43.62%), Postives = 167/298 (56.04%), Query Frame = 2
Query:  113 QFHVCPFVLRQRMDK-------GXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985
            +FHVCP + R+RM                       CPG+A+++    TGVCYFNMR  +  G+ V+QRSYNA AVRV   + +           PAV         GG      L GG        L    + G+G +             +VVPA ++ EG LC+EMRIRLY  GAMSKLL+RL KD+ N  VQLQGPF++  L P PAHRNV+MIAAGTGINPM+Q IR+Y +     A   + RSR+AL+ Q TS +DLY  +E+  L+A+  GLLE+T L+SG HRK N P A
Sbjct: 1407 RFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLN--ITGVCYFNMRA-QEKGKGVIQRSYNAYAVRVRDTNPT-----------PAV---------GGM-----LMGG--------LSHGGDKGAGTL-------------KVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGA 1653          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 8.250e-46
Identity = 118/331 (35.65%), Postives = 164/331 (49.55%), Query Frame = 2
Query:   26 VQTSLVPVAAAAFLENIQKRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRF----DASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985
            V T  VPV +        KR    + + ++FHVCP + R++M                       CPG+A+ + +   GVC+F+M   +  G+ V+QR+YNA AVRV  F    D SG  + P                                                              RVVPA E+ EG LC+EMRIRLY  GAMS+LL++L KD+ N  +QLQGPF++  L P PAHRNV+MIAAGTG+NPM+Q IR+Y +     A  T  RSR+ L+ Q  S ++LY  +E+  ++A+ +GLLE+  LVSG+ R+ N P A
Sbjct:  899 VTTFGVPVVSPGAGPAALKRTWSSKKLLQRFHVCPLLFREKMGTDSPIGRGLLFTKRPTYRYIFSCPGQAQALVETIHGVCHFHMPG-QVPGKGVIQRAYNAYAVRVQGFVDGKDGSGKGATPP-------------------------------------------------------------RVVPAQETSEGVLCIEMRIRLYHDGAMSQLLEKLSKDTDNPAIQLQGPFIITKLVPPPAHRNVVMIAAGTGVNPMVQQIRDYLALPRDQAHST--RSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGA 1165          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 5.280e-41
Identity = 115/298 (38.59%), Postives = 153/298 (51.34%), Query Frame = 2
Query:  113 QFHVCPFVLRQRMD------KGXXXXXXXXXXXXX-CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985
            +FHVCP + R+RM       +G              CPG+A+++                     VVQRSYNA AVRV   D +G            ++PG             A+ GG        L    + G G +             +VVPA E++ G LC+EMRIRLY  GAMSKLL+ L KDS N TV+LQ PF++  L P PAHRNV+MIAAGTGINPM+Q IR+Y +     A   + +SR+AL+ Q TS +DL+   E+  ++ +  GLLE+  L+SG HRK N P A
Sbjct: 1186 RFHVCPLLFRERMGAVSSFGRGYLPTSRPVYRYIFLCPGQAQILG--------------------VVQRSYNAYAVRV--QDTNGS-----------LTPG-------------AIMGG--------LSQGSDKGQGTL-------------KVVPAGETKAGVLCIEMRIRLYTDGAMSKLLENLAKDSDNPTVRLQAPFVIQKLVPPPAHRNVMMIAAGTGINPMVQQIRDYLALPKSGA--QSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGA 1414          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.130e-32
Identity = 93/226 (41.15%), Postives = 113/226 (50.00%), Query Frame = 2
Query:  113 QFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 769
            +F VCP + R+RM                       CP +A+  AQA +GVCYFNMR  +  G+ VVQR YNA AVR++           EPP                       PGG  A +                      T     +VVPA E+ EG LC+EMRIR+Y  GAMSKLL++L KD+ N  VQLQGPFLV+ L P PAHRNVIMIAAGTG+NP
Sbjct: 1090 RFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPAKAQAQAQAVSGVCYFNMRA-QEEGKGVVQRPYNAFAVRLLDV---------EPP----------------------TPGGRVAWSK---------------------TSAKLPKVVPAEETTEGVLCIEMRIRMYHDGAMSKLLEKLSKDTDNVAVQLQGPFLVNKLAPPPAHRNVIMIAAGTGVNP 1262          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 2.360e-31
Identity = 90/229 (39.30%), Postives = 115/229 (50.22%), Query Frame = 2
Query:  104 VFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 769
            +F +F VCP + R+RM                       CP   +  AQA +GVCYFNMR  +  G+ VVQR+YNA AVR++           EPP     +PG       G A    LP                                   ++VPA E+ EG LC+EMRIR+Y  GAMSKLL++L +D+ NA VQLQGPFL++ L P P +RNVIMIAAGTG+NP
Sbjct: 1093 LFERFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPANGQAQAQAVSGVCYFNMRA-QEEGKGVVQRAYNAFAVRLLDV---------EPP-----TPGGRVAWTKGFAK---LP-----------------------------------KIVPAGETTEGILCIEMRIRMYHDGAMSKLLEKLSQDTDNAAVQLQGPFLINKLAPPPVYRNVIMIAAGTGVNP 1268          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 8.650e-21
Identity = 99/328 (30.18%), Postives = 139/328 (42.38%), Query Frame = 2
Query:   80 KRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVI----------RFDASGGASLPEPP---RAPAVSPGDAAR--------AEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRL------YKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSV-SDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNP 979
            +R  R R     FHVCP +L +++  G             CPG A  +  +  GVC+F MR+ +  G +VV+R+YNA AVRV+            ++S G    E         +  G  AR        A  GH ST         +  + +  S ++    I       + DG    +  +   E ++ V   IR       +  G   + LD       N  VQLQGPFL   L P PAHRNV+MIAAGTG+NP                             +  SV +DLYC  EL  L+A+  GLLE+T L+SG++ + N P
Sbjct:  393 RRVARTRNPLHLFHVCPLLLHEKLCDGGGRPVHKFVFA--CPGTAAALVGSMEGVCHFKMRLTQEAGMTVVERAYNAFAVRVLDEEGKRRVVPALESSEGVLCVEMRIRLYPDGLMSGLLARLIKVVPTVAITGHCSTHK-------NHKLFISASNKLSRSPIGDRPTNRSTDGSTYALDRLFWEERSIRVSPTIRAPCSCCGWVRGGGHQNLD-------NPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNPS----------------------------ECNSVEADLYCTDELTALQAKANGLLEVTALISGDNTRRNVP 676          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LN38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN38_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.000e-15
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  596 MRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQ 778
            M IR+Y  GAMSKLL++L +D+ N TVQLQ PFL++ L P PAHR VIMIAAGT +NP  Q
Sbjct:    1 MHIRMYHDGAMSKLLEKLSEDADNPTVQLQVPFLIEKLAPRPAHRKVIMIAAGTAVNPSKQ 61          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5K906_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K906_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.030e-15
Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2
Query:  524 VTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPK-------DSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGIN 766
            V  + GK RVVPA+ES EG LCVEMRIRLY  G M+ LL +L +       +  N+ VQLQG FL   L P PAHRN +MIAAGTG N
Sbjct:   59 VLDEKGKRRVVPALESSEGVLCVEMRIRLYPDGLMNGLLAQLIRVRGIGHQNLDNSAVQLQGAFLRHWLTPSPAHRNAVMIAAGTGPN 146          
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LB74_ECTSI (Delta-9 desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB74_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.260e-11
Identity = 65/228 (28.51%), Postives = 86/228 (37.72%), Query Frame = 2
Query:   74 IQKRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNG---------------ESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLR 712
            I +R  R R     FHVCP +L +++  G             CPG A  +  +  GVC+FNMR+ +  G               ++VVQR+YNA AVRV+                                                                    ++GK RVVP++ES EG LCVEMRIRLY  G MS LL  L K  AN  +++      D  R
Sbjct:  647 IPRRVARTRNPLHSFHVCPLLLHEKLCDGGGRPVHKFVFA--CPGTAAALVGSMEGVCHFNMRLAQEAGMRLPRYRQKPVYVARQTVVQRAYNAFAVRVL-------------------------------------------------------------------DEEGKRRVVPSLESSEGVLCVEMRIRLYPDGLMSGLLAHLIKAKANGLLEVTALISGDHTR 805          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FX04_ECTSI1.300e-5242.62Dopamine beta-monooxygenase, putative n=1 Tax=Ecto... [more]
A0A6H5JBL8_9PHAE1.450e-5243.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW8_ECTSI8.250e-4635.65Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LFE6_ECTSI5.280e-4138.59Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G7J2_ECTSI1.130e-3241.15Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G7J1_ECTSI2.360e-3139.30Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KC42_9PHAE8.650e-2130.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN38_ECTSI3.000e-1563.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K906_9PHAE6.030e-1556.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB74_ECTSI2.260e-1128.51Delta-9 desaturase n=1 Tax=Ectocarpus siliculosus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig967contigF-serratus_M_contig967:312207..316498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.4
Seed ortholog evalue2e-47
Seed eggNOG ortholog2880.D7FX04
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DOMON domain
EggNOG OGs2D0T2@1,2SFBV@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1001
Cds size984
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932743.0448859-UTR-F-serratus_M_contig967:312206..3122221622932743.0448859-UTR-F-serratus_M_contig967:312206..312222Fucus serratus maleUTRF-serratus_M_contig967 312207..312222 +
1690964451.8646865-UTR-F-serratus_M_contig967:312206..3122221690964451.8646865-UTR-F-serratus_M_contig967:312206..312222Fucus serratus maleUTRF-serratus_M_contig967 312207..312222 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932743.064372-CDS-F-serratus_M_contig967:312222..3122851622932743.064372-CDS-F-serratus_M_contig967:312222..312285Fucus serratus maleCDSF-serratus_M_contig967 312223..312285 +
1690964451.8782084-CDS-F-serratus_M_contig967:312222..3122851690964451.8782084-CDS-F-serratus_M_contig967:312222..312285Fucus serratus maleCDSF-serratus_M_contig967 312223..312285 +
1622932743.079579-CDS-F-serratus_M_contig967:313077..3132211622932743.079579-CDS-F-serratus_M_contig967:313077..313221Fucus serratus maleCDSF-serratus_M_contig967 313078..313221 +
1690964451.8890595-CDS-F-serratus_M_contig967:313077..3132211690964451.8890595-CDS-F-serratus_M_contig967:313077..313221Fucus serratus maleCDSF-serratus_M_contig967 313078..313221 +
1622932743.0990503-CDS-F-serratus_M_contig967:313799..3138591622932743.0990503-CDS-F-serratus_M_contig967:313799..313859Fucus serratus maleCDSF-serratus_M_contig967 313800..313859 +
1690964451.8994083-CDS-F-serratus_M_contig967:313799..3138591690964451.8994083-CDS-F-serratus_M_contig967:313799..313859Fucus serratus maleCDSF-serratus_M_contig967 313800..313859 +
1622932743.117885-CDS-F-serratus_M_contig967:314130..3145021622932743.117885-CDS-F-serratus_M_contig967:314130..314502Fucus serratus maleCDSF-serratus_M_contig967 314131..314502 +
1690964451.9229207-CDS-F-serratus_M_contig967:314130..3145021690964451.9229207-CDS-F-serratus_M_contig967:314130..314502Fucus serratus maleCDSF-serratus_M_contig967 314131..314502 +
1622932743.1324692-CDS-F-serratus_M_contig967:314970..3150851622932743.1324692-CDS-F-serratus_M_contig967:314970..315085Fucus serratus maleCDSF-serratus_M_contig967 314971..315085 +
1690964451.934356-CDS-F-serratus_M_contig967:314970..3150851690964451.934356-CDS-F-serratus_M_contig967:314970..315085Fucus serratus maleCDSF-serratus_M_contig967 314971..315085 +
1622932743.149525-CDS-F-serratus_M_contig967:315397..3154341622932743.149525-CDS-F-serratus_M_contig967:315397..315434Fucus serratus maleCDSF-serratus_M_contig967 315398..315434 +
1690964451.943338-CDS-F-serratus_M_contig967:315397..3154341690964451.943338-CDS-F-serratus_M_contig967:315397..315434Fucus serratus maleCDSF-serratus_M_contig967 315398..315434 +
1622932743.1659274-CDS-F-serratus_M_contig967:315904..3160071622932743.1659274-CDS-F-serratus_M_contig967:315904..316007Fucus serratus maleCDSF-serratus_M_contig967 315905..316007 +
1690964451.9518661-CDS-F-serratus_M_contig967:315904..3160071690964451.9518661-CDS-F-serratus_M_contig967:315904..316007Fucus serratus maleCDSF-serratus_M_contig967 315905..316007 +
1622932743.2051644-CDS-F-serratus_M_contig967:316408..3164981622932743.2051644-CDS-F-serratus_M_contig967:316408..316498Fucus serratus maleCDSF-serratus_M_contig967 316409..316498 +
1690964451.960237-CDS-F-serratus_M_contig967:316408..3164981690964451.960237-CDS-F-serratus_M_contig967:316408..316498Fucus serratus maleCDSF-serratus_M_contig967 316409..316498 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig967.20994.1prot_F-serratus_M_contig967.20994.1Fucus serratus malepolypeptideF-serratus_M_contig967 312223..316498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig967.20994.1

>prot_F-serratus_M_contig967.20994.1 ID=prot_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=polypeptide|length=328bp
MNPVQTSLVPVAAAAFLENIQKRKERKRFVFRQFHVCPFVLRQRMDKGKE
EDRAVYRYVFACPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATA
VRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAP
VVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYK
YGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGIN
PMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEAR
GRGLLEITTLVSGNHRKTNNPRAPNTFQ
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mRNA from alignment at F-serratus_M_contig967:312207..316498+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig967.20994.1 ID=mRNA_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=mRNA|length=4292bp|location=Sequence derived from alignment at F-serratus_M_contig967:312207..316498+ (Fucus serratus male)
AGTCAATGCCGTACCCATGAATCCCGTCCAAACTTCCCTGGTGCCTGTAG CCGCTGCGGCGTTCCTCGAAAACATTCAGGTACGTGATGTACGATCCCAC TTTGAGGCTTACCCAGGCGTTGCTGCAGTCCTAGCTCTAGCTTGCTTGCG CCCGCGATATGTTTAGCTTCAGCTTCTACAGAGGCCGTACTTTCGTCTTC GCTATGGTATAGAATGCTCGTAACGGTCTCGGGGTTCGAGTGGCGATGCG TTTTGCGTGCAGCGCCCGCGAAACATCGTAAGAAGACCGCTAAAGTCAGT TATACCGCGCACTCATATCCTTTTTATGCTCCGGCCCAGCGCGGCATGCA TAAAGGTATGGACGCAGTGTACCAGTGCAACAGTGGTGCCGTAAAGCTAG GTTTGCTTGAACAAAAATGTTTTCACGACTTCACGCCTTTACAGGCATGT GCATTCGAGTGTGTTAAGGTGGGAGTAAGAATGGGATAACGTCGCGTGGG AGGTAAAGGGGAATACCAAGGTGTTGAGAACACATCAGATTACGCCCGGA AGGAAAACTAGCTTGGATTGCGTGGCTCGGTCCAGCGGACTTACTTCAGA GCTAGCCCGTACGTAGGCTTCGTTACACCGCTATTCAGAACAAGCGATTG CGGAACTCTTGGCCCACTTCCCCGGAGTGTGGACGTGGCCGTGAAGCAAA ATTAGAGTATTTTGAAGCTGACGAAACATCGGATGCGGAGCTAAATGTGG CGTACTTCCGCCAATCCTCCACACCGAGAGGGAAGAGATCACCGCGGATT CACCCTCCCCACTCAGCCCAACTCTAACCAACCCAATTGTTTGGTCGTAA CGCCTTCTTCCGTGACGACAGAAAAGGAAGGAGCGCAAGAGGTTTGTTTT CCGTCAGTTCCACGTTTGCCCCTTCGTGCTGCGGCAGAGGATGGACAAAG GAAAAGAGGAAGACCGGGCAGTCTACAGATACGTGTTCGCATGTCCTGGG GAGGCAGAAATGGTGGTGAGTGCTCCCCACCCCCCTTGCCCCCCTCGAGG CCATCGCCCAGAAGGGTGAGCGTTACTGCTATGTTTGCGATCTAATCCAG TACCCACCTCGTACGTTTATCCTCTCTTTTGTGCCCAGTCGTGCCGTATA ATTTTACGGGGGGTTTTGTGTACTCAACGTTTGGCGTGGAACCGTGCATT CCTTTTTTAGCGTTGTTTCTTGAGAACAGACGCCGCCGGCGAAAACAAGC AAGAAAACATGGGCGAGAATGCTGCCTTTCCGTTCAGCAGTAAAGTGTTA GTGGCGCTTGAAAACAACACCTGACAAATGTTCTGAAGGAGAATGCGCAC AAGACGCCTCGTATCTGTCTTATGGAGGCGTCTTTCGCCAACACATCCCA TGAATCGCCGCTCCTCTACGATGCGGAGATAGTAGCCCGTTTCTTTGTTG ACGTGTCAAATCCGTGCAACGAGTAATACTCATCGAGGCGGAGTTTCATG CTGATCCATGCAACATTTTAACCACCCCGCCGAGGAAGCACGCGCCGTTT CAGTCACAATCAATCCCACGTGAGCCCTCGCCGCTGTTCGCAGGCTCAGG CCGCCACGGGAGTGTGCTACTTCAACATGCGCGTTGTCCGCAGCAACGGC GAAGTGAGTGGGAAGCAACACTCTAGCGAAATCCTCCTTCCTTGGTGTGG TGTATGTGCGTCGAAGCGCGGTTCCTTAAGCAGAAATAGCGAGTAGCAGC ACCAGCGATCGTTCGCTCATCCGAAAACGCAAATACCTCAAATGCTTGCT TCTCGACAGTACCTGCCTTTTTCTAGGCATGACGCTATGTGCATAGGTTT AACCTGTGTTTTTGCTCGCGCTTCTCCTGCGGGGACTTACGGTTTGTCCA CCCTGCGCTGCGTCGTGCGTGTAGAGCGTAGTTCAGCGTTCGTACAACGC AACGGCCGTCAGGGTTATTAGGTTCGACGCCTCCGGTGGTGCGTCCTTGC CTGAGCCTCCGCGCGCGCCCGCGGTGAGCCCCGGCGATGCCGCTCGTGCG GAGGGTGGTCATGCCTCCACCATCGCCCTCCCTGGGGGTGATCCTGCCGA TGCGCCGGTCGTTCTGGAGGACAGCTTCGAGGTCGGTAGCGGCATCATTG ACAGCGGCACTGAGGTGACGACTAAGGACGGCAAAGTGAGGGTGGTGCCG GCCGTGGAATCGCGTGAGGGAAATCTGTGCGTAGAGATGCGGATCAGGCT TTACAAGTACGGTGCCATGAGCAAGCTTTTGGACCGGCTTCCGAAGGTGA GCCCTAAACAGTTTGGGCCTTGGGATACGGCCTCAGCTGATGCAATGCCA TAAATGGTTGGGATATAGTGTTTGTAGTATCGAAATGTATATCCGTAGGT ATTAGTTGGTTAGGGGCCTCGATGCAATGAACATTTCGACCAGTTGCTCG ACATTGCTCCGGGAAGGGGGGATGTGAGTGCCGCCGGCGACATTGCGTGT CCGCAATCACACCCAGTTAGTTAACAGCTGTCTGTATCCTATATTTTGGG GGGTTAGAGGGGGATGTCGTGTTTTCTTTTGAAAGAAGAGTACGTTGTAC GTTTTCCTTCCGGATGGTGTATTTCAATCAATCAAAACCAATTCCTTTCA CGATGCCTCGCCTGGAGAGCCTCTGAAACCCACGGCGAGCTTCTAACCCC ACGTGTCAAACGCCCGTATTTTTCAACGCCCGCGAAACGCGTTGCGGTGT ACGCTGGATGGCAGGATTCCGCAAACGCGACCGTCCAGCTCCAAGGTCCT TTTCTCGTGGACAGCCTCAGGCCGTGTCCTGCCCATCGCAACGTTATCAT GATCGCCGCAGGCACCGGCATCAATCCAAGTACGTTGGGAGTGGTTGGTG AAGCATCGTGACTCGCAGTAACTCCCTTGGTCGGTATTTTATCATCCCGA AAGGCAAAGCATAAGGTCGGACTTTGCGCCTCTCGGAGGAAAGTATCTGC TACATATTGTGCCACGATGTCCTCCCGTTACGTGATCATCACGCAGCAAG TGCAAAGTTGGCGCCAGAACTCTCTTTGTACGCCACGACCTGAGCGCACC CCCGTCGGCCCCAATCCCGTCCTTGTGGTTCGATCGATGTGCTCCCACCC GCGGGAATACCTGTTTTCTGTCGACGACACACTTACTCCAGTGATACAGT TCATCCGAAACTATCAGAGCTTCGAAAGGTGTGTAAATTCGGTTGAATCT GTAGCTGGTGTCAATAGCAGGAGTCAAAGCAAGTCTCTCACTAGGATCCA CGAATCAAAAGAAGCGTAGAACACGTAGAACACGCCCGTTGTTTTACGGT CTGTGGCAACTGATCTTTGCTTCCAGCCTGCGATAGAATGGAACCTCGAG GAAGAGAGCATTCGTTACCCTCTCACCGGAGATAACCATGAGACTTCAAT GGCTCTGCCTGAGATATTGGAACACCCTCTCCTTATCTAAATACAACACA ACTAGCCTAAAGAGATGATACAAGAGGAGCGTCGGGTTATGCCTTGAGCA GGCGCTTCTGTAGTACGAGATGTGGGGCAAAACGCCCTTCATCGAACCTA TTTATGGGAAAAGACTATAAGTGTGTTGGTCACGTCCACGTAGCGACAAA CTCCAACAACGCCCCCTGACTTTCTCTCTTGGCGTGCGGTTCTTGCAGTC AGGACGCCCTGCGCACGACGGGCCGATCGCGGATTGCTCTCCTCCATCAG GTCACCTCCGTCTCGGACTTGTACTGCGATAAAGAGCTACGCGTTCTAGA GGTCGGTTATGGAAAGTACTCATACTCGTTCGTTGCGTCTAATTTCGGTA CCGAGCATGAGAGTTTCTACCCTGGGGCCACGTACAACAGCGTGGCTGTC GTTCGTTGTGCTTTGGGGCTGAGGTATACCCAGAACTTTGCTTGGGGAAA ATCTCCTCCGTTTTGTGACCGAGTTCAAGCCACCGGCGTCTTTTTTACCG ACGGCTGCAAGGCTTTCTAGCGCACAGTTCAAGGCCCGCTTGTTCAGGAA CCTCCTTTTGCCAACTCTCCACCTTTCCCATACCCCAGATCGAACCGATG ATAGTTGTCCATCTGGTACAAAGTACAGATAATTGTTTGTGTTGTGGTAC AATAGTTTACCAATCTACCATGGACGCGCTTGCGCCCCCCTTGGTCCTTC AGGCAAGAGGTCGCGGCCTGCTGGAAATCACGACCCTGGTGAGTGGCAAC CACCGCAAGACGAATAACCCCAGGGCGCCGAACACCTTCCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig967:312207..316498+

>mRNA_F-serratus_M_contig967.20994.1 ID=mRNA_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig967:312207..316498+ (Fucus serratus male)
ATGAATCCCGTCCAAACTTCCCTGGTGCCTGTAGCCGCTGCGGCGTTCCT
CGAAAACATTCAGATGAATCCCGTCCAAACTTCCCTGGTGCCTGTAGCCG
CTGCGGCGTTCCTCGAAAACATTCAGAAAAGGAAGGAGCGCAAGAGGTTT
GTTTTCCGTCAGTTCCACGTTTGCCCCTTCGTGCTGCGGCAGAGGATGGA
CAAAGGAAAAGAGGAAGACCGGGCAGTCTACAGATACGTGTTCGCATGTC
CTGGGGAGGCAGAAATGGTGAAAAGGAAGGAGCGCAAGAGGTTTGTTTTC
CGTCAGTTCCACGTTTGCCCCTTCGTGCTGCGGCAGAGGATGGACAAAGG
AAAAGAGGAAGACCGGGCAGTCTACAGATACGTGTTCGCATGTCCTGGGG
AGGCAGAAATGGTGGCTCAGGCCGCCACGGGAGTGTGCTACTTCAACATG
CGCGTTGTCCGCAGCAACGGCGAAGCTCAGGCCGCCACGGGAGTGTGCTA
CTTCAACATGCGCGTTGTCCGCAGCAACGGCGAAAGCGTAGTTCAGCGTT
CGTACAACGCAACGGCCGTCAGGGTTATTAGGTTCGACGCCTCCGGTGGT
GCGTCCTTGCCTGAGCCTCCGCGCGCGCCCGCGGTGAGCCCCGGCGATGC
CGCTCGTGCGGAGGGTGGTCATGCCTCCACCATCGCCCTCCCTGGGGGTG
ATCCTGCCGATGCGCCGGTCGTTCTGGAGGACAGCTTCGAGGTCGGTAGC
GGCATCATTGACAGCGGCACTGAGGTGACGACTAAGGACGGCAAAGTGAG
GGTGGTGCCGGCCGTGGAATCGCGTGAGGGAAATCTGTGCGTAGAGATGC
GGATCAGGCTTTACAAGTACGGTGCCATGAGCAAGCTTTTGGACCGGCTT
CCGAAGAGCGTAGTTCAGCGTTCGTACAACGCAACGGCCGTCAGGGTTAT
TAGGTTCGACGCCTCCGGTGGTGCGTCCTTGCCTGAGCCTCCGCGCGCGC
CCGCGGTGAGCCCCGGCGATGCCGCTCGTGCGGAGGGTGGTCATGCCTCC
ACCATCGCCCTCCCTGGGGGTGATCCTGCCGATGCGCCGGTCGTTCTGGA
GGACAGCTTCGAGGTCGGTAGCGGCATCATTGACAGCGGCACTGAGGTGA
CGACTAAGGACGGCAAAGTGAGGGTGGTGCCGGCCGTGGAATCGCGTGAG
GGAAATCTGTGCGTAGAGATGCGGATCAGGCTTTACAAGTACGGTGCCAT
GAGCAAGCTTTTGGACCGGCTTCCGAAGGATTCCGCAAACGCGACCGTCC
AGCTCCAAGGTCCTTTTCTCGTGGACAGCCTCAGGCCGTGTCCTGCCCAT
CGCAACGTTATCATGATCGCCGCAGGCACCGGCATCAATCCAAGATTCCG
CAAACGCGACCGTCCAGCTCCAAGGTCCTTTTCTCGTGGACAGCCTCAGG
CCGTGTCCTGCCCATCGCAACGTTATCATGATCGCCGCAGGCACCGGCAT
CAATCCAATGATACAGTTCATCCGAAACTATCAGAGCTTCGAAAGTGATA
CAGTTCATCCGAAACTATCAGAGCTTCGAAAGTCAGGACGCCCTGCGCAC
GACGGGCCGATCGCGGATTGCTCTCCTCCATCAGGTCACCTCCGTCTCGG
ACTTGTACTGCGATAAAGAGCTACGCGTTCTAGAGTCAGGACGCCCTGCG
CACGACGGGCCGATCGCGGATTGCTCTCCTCCATCAGGTCACCTCCGTCT
CGGACTTGTACTGCGATAAAGAGCTACGCGTTCTAGAGGCAAGAGGTCGC
GGCCTGCTGGAAATCACGACCCTGGTGAGTGGCAACCACCGCAAGACGAA
TAACCCCAGGGCGCCGAACACCTTCCAGGCAAGAGGTCGCGGCCTGCTGG
AAATCACGACCCTGGTGAGTGGCAACCACCGCAAGACGAATAACCCCAGG
GCGCCGAACACCTTCCAG
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