mRNA_F-serratus_M_contig967.20992.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig967.20992.1
Unique NamemRNA_F-serratus_M_contig967.20992.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig967.20992.1 vs. uniprot
Match: D7FUL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL0_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.890e-54
Identity = 99/169 (58.58%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  199 MSATGFGICGKKNEYSSKTKTGNYVEDRIGMALAASFANAPRPLIGSTVVRDDFIDPSEMLNSNEPCEKCARMMMSAEDIRTKNRGGISFDLLLGHASNRKQADDLKKEQFLTIAAQSFPVTKAMSTAVAQDCARARLFRARKLIADVARERLQEDTLNTIARLQCSRA 705
            MSATGFGICG+KN YSSKTK GN+VEDRIG A+A   A APRP +GSTV R+DF+ PS M N N         MMSA DI+ KNR G+SFDLL GH  +   AD L++++FLT A +SFPVT  MS+ V +  ARAR FR R+ +A++AR+R Q  TL T ARLQ SRA
Sbjct:    1 MSATGFGICGQKNSYSSKTKCGNWVEDRIGKAIAKRLAKAPRPALGSTVEREDFVHPSTMTN-NTVVSGDDTKMMSASDIKDKNREGVSFDLLFGHVRDSHHADTLRQDRFLTNAWESFPVTSVMSSQVRERSARARDFRTRQRLAEMARDRRQSQTLTTTARLQSSRA 168          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig967.20992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUL0_ECTSI1.890e-5458.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig967contigF-serratus_M_contig967:182325..198693 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score182.2
Seed ortholog evalue2.1e-43
Seed eggNOG ortholog2880.D7FUL0
Hectar predicted targeting categoryother localisation
EggNOG OGs2E8UQ@1,2SF9R@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_002840.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size792
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig967.20992.1prot_F-serratus_M_contig967.20992.1Fucus serratus malepolypeptideF-serratus_M_contig967 182523..198612 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932742.5338173-UTR-F-serratus_M_contig967:182324..1825221622932742.5338173-UTR-F-serratus_M_contig967:182324..182522Fucus serratus maleUTRF-serratus_M_contig967 182325..182522 +
1690964451.7029424-UTR-F-serratus_M_contig967:182324..1825221690964451.7029424-UTR-F-serratus_M_contig967:182324..182522Fucus serratus maleUTRF-serratus_M_contig967 182325..182522 +
1622932742.732929-UTR-F-serratus_M_contig967:198612..1986931622932742.732929-UTR-F-serratus_M_contig967:198612..198693Fucus serratus maleUTRF-serratus_M_contig967 198613..198693 +
1690964451.7650108-UTR-F-serratus_M_contig967:198612..1986931690964451.7650108-UTR-F-serratus_M_contig967:198612..198693Fucus serratus maleUTRF-serratus_M_contig967 198613..198693 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932742.5507343-CDS-F-serratus_M_contig967:182522..1826051622932742.5507343-CDS-F-serratus_M_contig967:182522..182605Fucus serratus maleCDSF-serratus_M_contig967 182523..182605 +
1690964451.7213604-CDS-F-serratus_M_contig967:182522..1826051690964451.7213604-CDS-F-serratus_M_contig967:182522..182605Fucus serratus maleCDSF-serratus_M_contig967 182523..182605 +
1622932742.6590219-CDS-F-serratus_M_contig967:185092..1852431622932742.6590219-CDS-F-serratus_M_contig967:185092..185243Fucus serratus maleCDSF-serratus_M_contig967 185093..185243 +
1690964451.730995-CDS-F-serratus_M_contig967:185092..1852431690964451.730995-CDS-F-serratus_M_contig967:185092..185243Fucus serratus maleCDSF-serratus_M_contig967 185093..185243 +
1622932742.6865633-CDS-F-serratus_M_contig967:198133..1982231622932742.6865633-CDS-F-serratus_M_contig967:198133..198223Fucus serratus maleCDSF-serratus_M_contig967 198134..198223 +
1690964451.7401774-CDS-F-serratus_M_contig967:198133..1982231690964451.7401774-CDS-F-serratus_M_contig967:198133..198223Fucus serratus maleCDSF-serratus_M_contig967 198134..198223 +
1622932742.7106054-CDS-F-serratus_M_contig967:198423..1986121622932742.7106054-CDS-F-serratus_M_contig967:198423..198612Fucus serratus maleCDSF-serratus_M_contig967 198424..198612 +
1690964451.7538352-CDS-F-serratus_M_contig967:198423..1986121690964451.7538352-CDS-F-serratus_M_contig967:198423..198612Fucus serratus maleCDSF-serratus_M_contig967 198424..198612 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig967.20992.1

>prot_F-serratus_M_contig967.20992.1 ID=prot_F-serratus_M_contig967.20992.1|Name=mRNA_F-serratus_M_contig967.20992.1|organism=Fucus serratus male|type=polypeptide|length=171bp
MSATGFGICGKKNEYSSKTKTGNYVEDRIGMALAASFANAPRPLIGSTVV
RDDFIDPSEMLNSNEPCEKCARMMMSAEDIRTKNRGGISFDLLLGHASNR
KQADDLKKEQFLTIAAQSFPVTKAMSTAVAQDCARARLFRARKLIADVAR
ERLQEDTLNTIARLQCSRAS*
back to top

mRNA from alignment at F-serratus_M_contig967:182325..198693+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig967.20992.1 ID=mRNA_F-serratus_M_contig967.20992.1|Name=mRNA_F-serratus_M_contig967.20992.1|organism=Fucus serratus male|type=mRNA|length=16369bp|location=Sequence derived from alignment at F-serratus_M_contig967:182325..198693+ (Fucus serratus male)
CTGGTCTGCACGATCAACGACCCGCACATTTTATTTCGTTGACAAAAAAA ATGCTATTACTATAGGTAAAACTCTGGTACAGTACTGTAATAGTAGTACC GGCGTCACCTTTCGTCGACACCACTAGATAGACCTTAGTGCTATAGTCTA GAACTAGCTCTATCTCTGTGCTGTCAAAGAAAAGAGGAAGGGAAGACGAT GAGCGCCACGGGGTTCGGCATTTGCGGGAAAAAGAATGAGTACAGCTCGA AGACCAAGACCGGAAACTACGTCGAGGACAGGTGATACACTACAGTACTA CTGCTGTCAAATACTTCTAGTGATCGCTCGTATGATGTGGTGGTAAGATC ATGTAATGTAGCTGTGGAAACCAGGGAGACCTCGAGCAGTGACGTGAGGC TAGAGTTGGTGTATTGACTGACGGCAGAAAAATTACAGGTAGTATTGAAC CCAAAGTCTCACTGACTACTACAGTCGCACCGGGTCAACAACATGATAGT GGCGAGAAACTCACCGATCATATAATTGTACCTGGAACTGTTCTCTCGCG CTAGATCGCTGAGCATAACATTACTACTGGGGTTAAAGGTACCTTAGTAG TCGTTACCAAAGACCCTGCGATAGACCGTTGCCCACGCGTAGACGATGTG AAGGTCTCGCTCCAGTTCCTCGCAGCAGAGGATATGATGGGCGCGGTCCG TTCCTCGATGTGCAAAGATACCTTAATATCCGTGGTCCGGTCCTCGATGT GCAAAGATACGAAGGGCTGCATTGGCCTGACTGAGCAGCCTGATCTTCGT ATCGCGCACCCAGGTCAACTCCCCTTCCTCTCTGAACACAACCTTCAAAA CCCTTACCAGAATTGTCCCTTTTTCTTGAATCACTGTGGTTACCTCGTGC TCAGTGGAAGCCATTTTTCATCAAAGCTCTTCTTTTCACCGGATTAGAAC GAAGTTTGCACATCTCGCGTTTTCGTGGAGCACCCGCTGGTCGGGGTTGC CTTCACCTCTACGGCAGCGTCCTTCTTGGCACTGGCGCTCGTGCTGGCGC TCTCCCTAGCGCTCCCTCGGCCGGTATTGTCTCTCCTGCTCTCCCTGAGC AGGAGACTGTTTTCCCCTCAGTCGAATATCTCCTCCGAAGCTCTGCTTGC TGCACTGGCGGATGAATTGCCCGAAACCCCGAATTTCCAGACTCCTCGCA AAAAATCAGTCTCCAATCGTGGTCCTAGCTCAAGACAAGCCTTAGTACTT CGGTGCGTATCCACTATATGTGTACAATATTACTAGGCATTGCTAGAAAT ATTGAACTGTCCCACAGGGCGGTAGTCATCGTGCGTGCTCATTCATGTTC ACCGTGTCATGCGTATCGGGGTTAGCGCGATAGACTCGCGTTCTCTCTCT GTTCCGAAGAAGTGCCAGGTACCTTTGTCACTCGTCCCTTCTTGGCCTTG ACTCGAAGGCTTTAGATCATTTGCAAGCCATGCGAATCTGTGGCGACAAC TACAGCATGCTGTCTGGTGCACATTTACTTTGTTGCTGACGTCCATCCTA CAAAGAGAGGCCTGGCTTCTGAGGCGTCAATCAAGTAGTGTGTCATGATT GAAATAATAGTTGATACCCCAAAAGAAGAATGGAGACGATTTGCTACTAC AGCACTACTTTGCTGACGCTAAGATTATCCATCTTTGATCACGTAATCTA CACATTACAGATCGCTACGAACAGCGACGGACCCGTTCAACGATTGGAGC GGGCGGGGATGTAGCATATTCGTCCCTGTTTTTGGAGGGAACGGCTCAAA AATAGCTCCTACCGGGGACATATTTGACCAACCACCTGGTCAAATGCGAT GACTTCAGGGCAGGCTTGCCGACCATGCAAGGGGTCATGTAGTCTCACCC CCGGAAGGGCTGTTTTGGGACCTCTCCGGGGACGAAGCTGTCGTATCCCC GCCCTCCCCAATCGTTGAACCCTTCGACGCCCGCATTTCTCTTGGAAGCA GAAGGTCTTGCGGTTGCTCTGTGCAGGGAGCGCGGGCTTTGGTCAAGCCC GTGAACTCTCCTGCATCGAAACTGAGATTTTCTGCCCGAGAAAATAGCCT AGTAATAGGCAAAAATGGGAATTTAAAAGCAAGCGTACCATTTCTCGAAG CTGGCCGCCCACGTGGCAACGCAATGTCGTACGAACGTTTCAGAGGGGGA AAAGTCGGTGCTCGCGATTCGGCGCGTGCCCCGTCTTTTTGTGCGTGTCT TCCATTTTGATTTTTCCCGGAACGCAAAAAGCGTAAAGGTGAAAGCAAGC GTACCATTTCTTGAAACCGGCCGCCCATGTGGTAACGCGATGGTTGTACA CATAACGTTCTTGAAACTGGCCGCCCATGTGGTAACGCGCTGTTTGCTTT TTTATCTCTTCCATTCCGAGTGTCCTCTTCGTGCGTACACACGCAGTACT ACGGCAGTATCAATAATAGAGGGGTCGGTTGCGATATCCGTAGTACCGTG GCTGTCTCGGCTGCCTATTTCTACATTTGCTAGACTCACTACGCCTCTTA TGGTCTGCCAAGCAACATCGCTTACCGTGGCTGTTGTTTATCCGTGTATT TCCACTCCCAACGTTGTTAGGCGAAGTATGTCCCTCGTCTGAAGGCAAAC CCGCGAGCTGTCGTAGGTAACCTATCAGGTATCGATGCCGATGTATTTGG CTTGACGTCACTTGCTCGCTCGTGTTGAAACGAAAACGATTTATTTTTAC TGTATGCAATACTCGCAGAATCGGCATGGCGCTCGCGGCGAGCTTTGCTA ACGCCCCACGCCCCCTTATCGGGTCCACGGTGGTTAGAGACGACTTCATC GACCCTTCGGAAATGCTAAATTCCAACGAGCCTTGCGAAAAATGCGCGCG GATGATGATGTCCGCTGAGGTGAGGGTCGTTGAGCTGTAAAAAAGTATTA TGAAACTGAAATATTACGCAGTTTGACACTATAGTCTATTGAGTCTCCTT GTGTTTTGGCGTTTAACGTTTCTCCTCAGAATTTCATCAGTTGCATCTCG AAGCTCCTGGAAACTGGTGCACGAGGGGATGGCTACTCACTCGCTGTGGC CGTCCAAAACAAGGACTGAGCAACGAACCACGTATTATCACGTTGTGGCG ACATCAAACCACAACACGAAATTCAGTCAGTTCCCTCCGAGAATTGCACC CGGAGCTGTTGAACATCTATCTTGTGGAAGTCTACAAAGAAAAATCTGGA CGCACGTAAACCTTCTTCTGAGCATCCCCCGGACAGGGGGAAAAATAGGC TGCAAGGACAACAAAAAAACTCTTCATGGCACTTACTCGGGTTCCTCGAT GATAGTAGCATACATACCATATAAATAAGTCTGCCTCTGTAAACTTAATA CACAAATAATATCGCCCTGGAAATTAGAAAGGGAACTGAAAAGACCCGGT ACACCGGGTGATTTCTAGAACAGATACGATATACGCTAATAGTTCTGTTT GCAGGAACCGTTACGGCACAACGCAAAGGCTTAAAACGAAAGTTCAAGAC ACGAAATCAATCCTCGCGCGTAGAGTCTAATAATATTAATAGTTGTGTGG CAAGCGTTTCATAAGAAAGAACCCTCGAAAAACTACCTTGCCTTTCGTCT CGAACGAGGGCGCTGAAAACAGGGCTTCTTCAGAGGAAGCCTCTGTCCAA TGCCGAATGTATCTAGCTGATGATGTTGTGTCGCTGGTGGTGATGTTATC GTTGTTGTTTCTCACGTTCGTTCTGCTTAGTACTGGTAACCAACCCGAAG ATGATCTACTTTTCAAGGGAGGTGGTTGTGGCCAGCTGAAAAGGGTAAGA AGATGCAAAGGAAAACGTCTGGCGTCGCACCCCACCACCATCCGACCAAA ACATATATTACGGCATCCTCCATCTATCTCTATTGATGGTCTTCCAGGCA AGAGTGCCGCTGCTGATAGGATGGAACATCGCAAAAGCAACACACAAGGC GCGAATAACAAATAACACATAAAAAAGATGGCCAGGGGGGCACCACGTAA CGCATCCACATATTTAAAGAAAAATCTGAACGCACTAGGCCTTCTGAGGA TCCCCCGGGTAGGGGGAGGGAAATGTCAAAACGTTTGGGTGGGATCATGG GCTGTAAAGACAAAACCTCTTCATGGCATTTAGTCGGGTTCCCCAATAAT GGTAATAAGTATATTGTCGGGGAGAAGCCCACCATTATGCTCTACACTTA CATTAATGTTTAGGTATTACGGAAGTCCCAGTACTAGGTGGGATAATAGG TGTCGCTTCGGAGATTTACGCTTCCCTGAACGGTAACAATTTTACTTACT ACCTCGTTTTTAAAGAAAATCTGAACGCATCTAATCCTTCTAATCAGTCG AAAGGTTTGGGTAGGAACATTGGCTGTCGGGACAAAAACTCTACATGGTA TTAAAAAGGTTACTCAATGTAGTAATACAGGGTCAACAGCATAATATCGA GGAGAGGCCCACCGTTATACAACAGTAACATTAATCAACATGTAGGGACA TGATCCCACCTAAACGTTTTGACTTTTTCCCCCCTGACTGGGGTATAGTA TGCTCAGAATTTCTAGATGCGGACAGATTTTTCTTTAAAAAGAAAGGAAC AATATTCGAGTAGATATACAATATATTTGGACTAAGAGTTTCGGGCTACG TTTCGTGATAGTCTATGGTATGATGGAGAAATAAAGTTAAAATAAGGTTT GGTGTTATTATTTCGATGAAGGAAGTCTACAAGTCACTAATAATGTAAAG GGCCTTAAATTTACAACAGGCCCTTTGAGACTGATACACATTTAGCAGGT GTTTGAAGGTTTAGTCACATTCAGTAATAAGGCTAAAAGGATAATTCGGG GATAAGTTACTTGTCATATTATACAACTTACTACATTCATCACCATGCAG GGACACCGAAAACAAATATATAAGATAGGGTAGCTATCGCTATACGCTCG CTAAAGGATAGTTTGGTAACTATCGTCAGCTGTACACAGGTGTTGGTTTT TAATCAAACAGGGCAAGTAATTCGAAGTTCCACGTTCCCGCCCTGAACAC AGGTGTTGGTTTAACCAAACAGGGGGAGCACATCACGAAAAGGGACGAGC TCAAATTGATACAACACAGATTAGAAGCTCGCTAAACGCTCGCAAAAATC TACATGTACAATGTATTTGGACGAAGGGGTCAGGACGTACAGTAGTATTA GGATCATAGAAGGGATTAAGTATACAAGCTGGGCTGGCCAAGAAACTGAC TTCTGTTCGTTCATGTCTCGCTCTGCCGTTTCTACGAGTTAAAGCTTGAA ATTTGGACGCTGCTCCTATACGGCAAAAAGGGAAGCGCAGGCGTCGGAAC TTTTCGAATCCGAGTTGATTTTGGTAAACAATGACCAAATGGCGGCGTAG TGGAGGATACTTCCTATACTAAAATCAGTATGAAAAAAAGTGTCACGGAT CAAGCTGAAATTTGGTGTACACGTACCCAGGAGCACCGCAAGAGCGTGGG TGGTAGTTACAAGGCTCGCCTCGTTTTCTATCAAGAGTTGCGGCCTCGTA AAGATTCCGATACAAAACACAAGTGAACTGAGGAAATGTGGGGGTATCGC GATTTGCCACGCGGTTTTTACGATTGTTTACCTGAAATTTTGACACGTGA TTTAGACCGCTCTTGCGGAGAGGACCACCCCTGCACATTTTTTTaTTTTT TTATTTTTCCCATAATTTCGTCGCGAAACAAGTATTCCCACATCTACTTA TATCCGGCTATTATACCATAACTTACGGAAAAAAATTAAAACCAAAATGT GCAGGGGTGGTCCTCTCCGCAAGAGCGGTCTTAATCACGTGTCAAAATAT CTGGTGAAAAATAGTAAAAACCGCGTGGCAAATCCCATTCCGCCATGTGT ACAGCGTCTTGGCCAGCCCAGCCTGTATTGTCGTCGTTATTACCATGAAT ATAGAAGCAGGCGTAACGTACTTGTAGCATAAGTCTAGCCACGTCTTCCT TCTCTTTCCTCCAAACGGTCATAAACCTCCACTCCCTCTCCGCGGCCTTC TTAATCCAGGCGCCTTCCATCGGGCGATCGTATCTTGTCCATCCGGCGTC AGGATCTAGGAAAAAGAAATAACGAATGAATGTAGTCCTCCCGGCCCACC GCTCGAAAATAAAAACATGGAGGTCGGCCGTCATCGCCTTCTTGATGTAG ACTATAGTATATATATTCTCTTCTCGGGAAAGGTTAAACGTCTCCTTAAT TCCGGCATCGGCTAGAAATACGTTGGAAGTAACGATCTACACGACGCGGG ACGGGACGACTGCCGAACCCGTCTCGTGAGACCAGATTTTCGGGCACGAT TGGGGACAGGGAAATGTTAGTTTTCCCTGTTCAGCTGACCACGAGCAGGA TTGGCACAGTATATGTGAGGACCATCCATACATACAACTGCAGTTGTACC GCACATGCATCTGTACCTACGAGACAAACAACAAGTTGATTTGGAGACCA ATGTTTGTTGTCGCCATACGTTTTGAGAGAAAAACATGAACGCATCTACA ATAAACCTTCTGAGCATTCCCCCAGCCAGGGGGGAAAAACTGTCAAAACG TTTTGGTAGGGAATATAGCCGTTACTTTCAACATGCCCACTTCATAACCA ATAGTGGGTGTGGGAAAGAGAGGCGTATATTAATTGGTCCATAGTGACCT GCGAAGGCAGCACTCGTTCGAAACTACCTTGAGGTATGCTGGCCCTGTGC CGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGA TTTACTCGGGACTGACCCGATGGCGTATGGCGGTTTAATATTAATATATG GACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCA GCCTGAGTATGGAGATGAGCAGGCTGACGCGGGATGGGACTGCCGAAACC GTCTCGCGAGACCAAATTCCCAGGCGCGAACGCGGACAGGGGAATATTCC TTTCTCTGTTTAGCTGACCACGAGCAGGATTGGCAACCTTACCAGGTTGA TCCATACTCTTGCTATATGTGTGACCATACATAATAGTAGGTTGTTAGGA CAAAGACTCTCCATGGGGTCTAATTGGGTCAGTTCCCCAGTAAGTAATGG GAGCTTAGGGTGAACAGTATAATATCGGGGAGAAACCCGCCGTTACGCTG TACACTTACATAATAGCCACGATGTAGGGACACCAAAACAGACGCAAAAG TCCACGCTGAACAAAAATACACCTCAGTCATGTTATATTACACGGAGTAT TGGGTTTGATATCGGGTTCAAGTATTATTGGTGAGTCGAGGTCGTTTGTA AGATGTACGATCAATATTAATATTCGCATTGGATCAACACTAAAATATCG GGGGGGGGAGTATGAAAACGTTTAGGCTGGAACGTAGTCCGCAAAAAAAA AGTCAAAAATATATTATTCATGAGATTTAATTGGGTGCCCCATTATTGGC ATAATATCGGGGAGAGACCTACCGATATACTGTACACTTACAGAATCGCC ATGCAAGTTCAGCAAAACAGAGGCAAAAGTGCATCCTGAACGAAAATACT ATTTATACACAGTTATTATGCTATGTTGGGGTTGCTACTAATAATCGGGT TCAAGTGTTGGTGAATCAAAGTCGATCGTAGGATACAGTCACATAGGGTC AATGGCATCATATCGGGGAGACGCCCGCTTCTTTATGATCAACTTACTCT TACGAGTACTATCATGTGAGGATATGAAATCATAACCAGACAATAATTTG CACGAATATCATTATTGTTCTATAGACTATATAGATGGGGGGGGGGGGGG GTAGAACGTAAATAATATAGAGTAATAAAATAAAATAAATAAAAAACTGA GCATATATCTAATGAGCATATTTGGTGAAGCAGTTAGGTCCTATAAAGTA TGGTGAGGTCTGAATTTTACTTTATTTTCACCGATGGACCTCGACGAGTA GTATGTAACGACTGGTGATGGTCATCTTGTCATCATGGTGATGGTGCTAA ATCTTCGGCTGAAAGTGAGAGAACAACGACAAAAACAACTTCTCGCTGAC GACCCGCCCGTCGACCGCAGAAATGTACCTGGTACTAAATAGACAAAGAT CGAATAAAAGGGGGTATAGCTTTCGAGACACAATCACCTGATGAGCTGAC TGTGGTTGGGCTTTTCGGGATTACTTTGAGGACCTCACTCAACTATCATT TCTTGCCATCCCACGTATGTATGTATGGTCACACATATAGCAAGAGTATT GGATCAACCTGGTAAGGTTGCCAATCCCGCTCGTGGTCAGCTGAACAGGA AAAATAATATTCACCTGTCCGCGTTCGTGCCTGGAAATTTGGTCTCGCGA GACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCA GGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGC GTCCATATATGTACATTAACCGCCATACGTCATCGGGTAAGTCCCGAGTT TATACGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGG CAGCACAGGGCCAGTAAACTTCACGGTAGTTCCGAACGGGTGCTGCCTTA GCAGGTCACCATGGACCAGTTAATATACGCCTCTCTTCCCCACACCCACC ATTGGTATGAAGTGGGCATGTTGAAAGTAACGGCGATTGTATGGTGATGA CTTATAGCAGAGTATGGATCAACCGGATAAGATTACCCATCCTGCTCGTG GTCAGCTGGTGAACACGAAAATAACTTTTTCCCTGTCTGTCCCCGTTCGC GCCTGGAAAGTTGGTCTCGCGAGACAGATTCGGCCGTCCCGCCCCGCGCG TACGTGTACGTGCTATGGTTCCCCCTTTTTGCTTCGGTCCATGTCTTACG CGTCCAATGGAGTGTTCTTCGGAAATGCTTGATCCGTGACCTTCATGTCG TCTTTTGTTTTTTACGGTCGCCTATTACAAATTCCTCACGAGGGTACTTC GGCGTTGTCCCACCTTGTTTGTAACATGTTTATTTCTAAATACGTTTCCT GTGATTTGACGTTACTTTTATCGATCCATTTATTTTCCAATTTTTACTCG TGCTTAATTCCTTTGCGTCACAACGGTCATTATCATGCCTCGGGGCTTTG TACGCTTTCTCCTCAATCAATATAAATTTTGTCTCAGGCCAAACATAGCA CACCAATGACGATAACACACTTATCCGAGTATACAGATTATACTGAGCCA GGGGAGAATCATAATTCACGATTCTGGATGAGATTTGTTATCTCGCTATT CTTTTCTGTAGGGCGACACTAAACGTATGATGTAGCCCCCACATATTTAG TCTTTGACTAGTATCCTTGGAATCTGGAGTGTACTTCCGGTAGTATACTT TCATCTCCGGGTGCCTACTGACGTATTATGTGTCTCCCCTTCAAGCTGCG CTAATAATGATACGTTCTTCATAACATCTCTCCAAGACTCTTAGCTCTTC CCTCTGGCGAGGGTGTATTAACACACGAATGTCCTCGGTGCCGAGGTTAC CCTAAGATGCCACGGAACTGGAGCAAAGCTGTCTCCGAGAACAATGGCCC CGTCCCCCACTAAGATGAATTTGGGGACGCATATAGACGTTTTGAAGTAG GACTCGATAGACAGCTGAATCAAATGAAGAGCCATTTTGATGAGAGGATG AGAGAGACAAGACAGCGTTCAGCAAGCCTAGAACAAGATGCTCGGCAGCC ACGTCTAGCCATGGAGGCAGACGTGACATCAGACACCAAGACTTGCAATC GTATGGAGGACGTTGCAGCAGAACGAGCGATGAGTAGGGATAACGTTTCT GCCGAGGTCGGTAAGGAATGACAGATTGGTAGACAACGGCGCTGCGGCGC CAAAGCCGTATATCTTGCACGGAGATGCGCACGCGAACAGCCGCCGGTGG CTCACTTCCCGCCGGCGAAAAGGACCATATTTTACAATCTTCCTCTTTGG CTTTGCCCGACAAGGAGACGAATTCTAGAACAACAATTCAATTCGCCATG GACTACAGCAGTTTCTGGATGATAAAGGTCTTACAAAACAAAATCGAAGC AAACTCGAGTGTTCGATCCTGGCAGCTCTACAAATCGTCTACGTGCCTGC CCGATTTTGAGAGCGTGGCGCGTGTTGCTTTGTGGAGAGGTTTTTGATCG GGCGCTGGATGATACCCGTGGCTAGAGCGGGTGTTTTGGCAGAAGGATGA CCTCGGGATATCAATTTCCCGAAAGAGGTAAAAGCGACTTGTACGTATTG TGGTCGATCGTTGTTTCTTCGCAGCCATACTGGTTTGGACATGCCATGCC ATCAAAGTTCGACATCATGAGGCTATGTGAGTGTGAGGATGAACAGATGT CAGGGAACGACATGGAGCGAGAAACTTGATAGCAAGGAAATCCGCGGAGT GCTTGGTGGCGAGTGCGATCTGGAGCCGAGAGGATCCGTTGTTTTCTGCA CATCAACACGGAGTCAACCCACCTTTCACCATCTACAAGTGTTGTATTAG GCTGATTTAAAAGGGGTGGTGTTTGGCTTGATTCCTTGTACTGCTGTACT GCTGTTACAGGAGTACCATACATAGCTTTGTATATTTCCTTGCGGGCTGT GCTTTCGTACAGATGGATTTGATTTGCGTCTCCTAACCCGCGCATAGCCT TGCTTCCGCAACGACGGTTGTTCGGGGAAGGTTGCCCCCGAGAACCCGCG CAGCTAGTTACCCGCAGCGGGCGAAGGGAATTGGGGAGGGTATTATCACT TAAAGCCGCACGATCGATTACTATAGTATTCTGATTTAAAGTGTTGTGTT GTTGCGTTCAGATTATCAAAACGAAAGTACTGCTTCAAGAAACAGTAGTA GTTTTGTGTTCATTGATAGCAGACTCTGTGACGCGGTTTGTTTTGTCGAA AAAATAAATTGCTGTTGGCGCAAGCTCTACAGTACTTGAGTAGATCATTG AGCCTTCTGAGCCCGTCTAACCGCTGTTGAAAAATTGATTTAAACGACTG TAACTCGCTTGAACCAGTCAGATAGCCTTAGGTGGTCTGCAAACTGCTTC CTGAAAAATGACTGCAAGAAACGACGCTTGACCTGCAACTTTCTTCTTGT ACTAAATGAGTATTGGGCGGAACGTATGCTCCAAGCTGGTGGCGTATATT ATTTGCCAGTACGTCAGTAGTTATACTTTGAACGAAAGGGTCATTTTCGG TTGATCTCGAAAAATACTTTGACCAAATTATATCGTTTGATGATTATAAG ATGTTTATGCTTTTCTAAAGAAGTAGAATTCCCATTGCACTGACCCCTTT ATTCGCTTACGTCCTGTTCGTAACAGAAAATACCCTAATTCAGCTTGCAG TGTCTCCTCAAAATGCATGCATTGGGGAGGGAAATTTTGCTAACGCGTTT TGATCGATCGTGTACTATCGGTACGCGCTCCTTGTAATGTGGATTCCTTC AACTGAAATAGCCTAGTCTGTAAGACGCTCCAAGTCGGTGGCGAAGGATC TTTTTCTCCATCCTGCTTGCGTCAAGTTCGACTGATATGTGACGCTTTGA ACGGTCCTCTTTTTCTGTCTTCAGAAGGTTCTTCTCTGCCTCGTAGAGCC AATGGGAGGGTACCCGAGTATATAGTATATAGATTACAGCTTGAGACGTT TTCGAACCGCGTTGATTGGACCAACCCAAGGACTCCCTAAGCGACGTCGA TTGTGCCGTTAGTGAAAACTGAAACCCTAAGAGTACGGAATGCGGTAGAT GCTACGCGTTTTGGGTGCATGGTTGCGATCCGGGGAGGGTATAGGATGGC TCGCGGCTGACTCCTCTGCCTCGTAGAGACAATGGGAGGGTACCCGAGTG TATAGATTACACTGAGACAGGGGAGAACCATAATTTACGATTCTGAATAG GATTTGCTATCTCGTTGTTCTCTTCTGTAGGGGGGTCATACTATGCGTAT GATGTAGCCCCCACATATTTAGTCTTTGACGAGTACGATTTCTTCTGACG TGTACTTCGGGTAGGACTTTTGTTTCCCCTTCAAGCGGCACTAATAATGA TTGTTCTTCATAATATCTCTCCAAAACTCTAAACGTTTCCCTCTGACGGG GAGGGTGTATTACCAGTACTTACTACTTGGCCTTGTGGGTAGGCCTTCTA AACGCATTCTTCGCGCAGGAGAAGTAAAATAATAGAAACACTTCCCCTTC ATTGGGTGGATGCTTAGAAAAGAAGGTTTAGATACCTTCATATTTCATTT GAACAGAAATAAATGGCTGCCCCTTAAGAGGAGCCGAAAAGAGCAACGAC AACAACAACAAAATTCAAACGACTTGATGGGAGACTTGAGACGTCGTTCG CTCCTTCTTCAGCGAAAGAGTCTAATGTGATGCGTCAAGGAGTACAACGG ACGCATACTCAGCCCCGCACGAGCATTTGGTTCCATCCCTCCGGCGCTGT AGTAAAGCTTGACACCGACAGGTCTTGTACAAGGTTTTGTAAAAGCATGG TAGATGTCAGTGGGGCAAAAAGTGGCGCGCCCACGTTCAACAGCGCGCCG CAGGTTTGCAGGAAAGGGACAACTAATTAAATGATGCGATGTTCCCACCC AGGCCGATCTTTACTCTGCTGCTGCTGCTGCGGTAAAATCCTTTTTTTAC TGGTGGTAATGATATAGGGGGGGGAGGCGGGGGGCGCCAAGCCGCCGTCA GATGCGCCACCAGCCAAGGCTTCTTCAATAACTAATTCTGCTATGAGTAT GTGTCCATCGTGGGTGGGTGCAACTTTCGCGATATTTACTACTTCCAGAA AAATGCGCGACAACTTTGCAATATCATACGGAGTACGTAAGCACGAGAAT CGAACCATACATGTTAATGGCCCGTCGCCCGAGTGAGTTCTATTCTCGAC AGGATAAAATGCGACTACCATGTAGAGGAACCCTTTTAATACCATGAAGA GTCTTTGTTCCTCCAGCCAATGTTTCCACCTAAACCTTTTGACGAATTAT TTTTCCCCCGAGGGTGGACGCTGAGATTGATGCAAGCTTTTTAGATGCGT TCAGATTTTTCTTTTAAAACGCAATTTAATGACGGTTCCGTAGCGAGTAT GTAGGTCATCACACATATAGCAAGAGTAAGGATCAGCCGGGTAAGGTTGC CAATCCTGCTCGTGGTCAGCTGAACAGGTAAAATGAATATTTCCCTGTCC CCGTTCGCGCCTGAGAAATTAGTCTCGCAAGAGGGGTTCGGGAGTCCCGT CCCGCGTCGGCCCGAATCTGGTGCTTACTTAGTCTACTGGATTATAAATA AAAGTTCAACCATTGGTTGACGAGGTGTAACCTTTTGGTGTCGTTGTATA GTATAACGAGTGGTTTCTCCCCTATTTATCATTTTGGCCCTACCGTATGT GACTAAACCTTGTACCAGTATATTAGTCTCAAGGGGCCTGTTGTAATTCT GGGGTCCTTCACATCTAGACTATGACTTACTTCACTTGTAGATTTCCTTC ATCGAAATAACAACAACGAACCTTTTCTTGTAAAAAAGCACCGAGTTTTG TAACTTTATCCTTCTCTATGACCATATTACTGTATGTTTGGCCATCACAT ATTACAGCAGAGTACCTGGTATGGATCAACCGGGTAAGGTTGGCAATCCT GGTCGTGGTCAGCTGAACAGGGAAAATGAATGTTCCTCTGTCCCCGCACG CGCCTGAGAATTAATTGGTCTCGCGAGACGGATTCAGCCGTCCCGTCCCG CGTCAGCCTGCTCATCTCCATATTCAGGCTGAATCTGGTGCTTACTTATG GGATTCCTCCCGAGTTCCGCGGCGGCGTCCATATATGTATATTAACCCCC ATACGTCATCGGGCAAGTCCCGAGTTTATCGGTTCACGCAATTGCGTACC GATGGCGTTCGCTGCCGAGAGTCCGCTAGCACAGGGTCATTATATTACCA TATTATGATCAGCCATCAAATAAATTACCTATTATAGCGTGTGTTCGGTA CGGTACCTACCGAGGCATATCGCCGGTATTACCGTTACCAAACACTTCGG TAAGTTCCGTAGGCCGGCAGAAACATACCGCCGGTACCGGTACAACATCA ATACCGGTGCCGGACACTTCGGTAAGTTCGGTACGTCAGGGTTTGATTTT TGACTTGTATACATTGCTGTTTTCTGATTATTCTTGTTTTATTCATAATG TAGGTTTACCGGCGCTACCGTTTTCACCACGCAAAAAAACTAATTCAACA AGTAAAAATAGAAATAATAAATGCAACTTATTTTGACCAAGTTTAAGGAG ACCCTCCGGTTTCTTTCCCCTCTGTTTTTAGGTCATAATCCAAAGGGTAC CTTTTTACCGGCGTACAAAGAACTACTTAAGGCGTACTCCCATATATATA TATACCAGTATATATATATAAAGTAAAAAGTAAAAAGTAAAAAGTATGTT GAAACGCAAGCGGGTACCGCTGTGAAATACCGCGTATGCTCGGTACATAT ACTGCCGGTACCGGTATGGAAGTCTGTACCGGTACTGGTATGACATCAGT ACCGGTACCGGACACTTCGGTAAGTTCGGTACAACATCAATAGCGGCCCC AGACACTTTGGTAAGTTCGGTACACCATCAATACCGGTCCCGGACACTTC CGTAAGTTCGGTACACCATCAATATCGGCCCCGGATACTTCTGTAAGTTC GTTACGGCATCAATACCGATACTGGGCACTTCGGTAAGTTCGGTACATCT ATACCGGTACCGGGCGTATCGGTACCGTACCGAACACACGTTAGCAAACT ACAGTTTGACAAGGCGGGAGACAAGATTTTGCTTTCTGATAATTATCAGG TGGATCTTACTGCTATTTAATAGAGGAAGAAGAGAGGTAATATTACCCTA TGCAGTGCAATTGGTAGTAATTTTTCGTGCCTTTTTCGCTGGAACGCTTG CCACAAACAAACCTAGGAAAGGCTCCACGTGTGAGGGATACCCTTACGTG TTTTGATAGGCCTTTGCTCCTTTGGCACCCGCCGAAAAAGTCGACTTTTG GTTTTGGGCGCAGAAAAACGGCGGTTTTCCGGAGCGCCGGAAAAAAAAAC AAACGCTGATTGGCCACCCGCCCAAGCCAATTTGCCCCCCCCCCCCCTTC CCCCTTCAATATTTGAACAAATATGAGGTGAGGTGAAATATGTCGGGCTG CGTGATTCGTTGCGAACGGCAGAAAAAAAAATGTGGGGCCGAAAAACATT TTTGGGGGCCGATTTGTTTTTGGTATTTGGCCATCGAACACCATAACGAG GCGGCGCCGAAAAAAAGAAACGCCGAGGTTTTTCCGCTTGGGCGCCGAAA AATACGACTTTAGGGAGCCTAAGGAGCAAAGGCCTAAATGTTTTGACACG TGATTTGCGCCGCTGTGTGCCGCTCCTGTAAACAGAACCAAGGTGTACCT TATTTGGTCCAGAAGTTACCCGGTGTATGTACCGGGTCTAGTTAATGTCC AAACATTGAAAAATGCTTCACTCTCTCATACATATTTTTTGTTGTGTAGG CATAATTTTTGCGGGGACATTCGAAACGCCTCTAACCTTTACTCAACGGT CCACCACACGGGAATGGCGTGTGTTGCCTCTCAAATGTTGTCCTTGTTTC GTGCCACAGGATATTCGGACCAAGAATCGCGGGGGCATCTCCTTCGATCT CCTCCTCGGTCACGCGAGCAACCGCAAGCAAGCCGACGACCTGAAAAAGG TTCTCTCGAAAATCAACGCGCGCCCCGTCCAGCCGTGGCGTTTTCTGATA TATTATAGTACGTGTCAAAAGCTCGAACACATCGGCGTTCTTTATCGCCA ACCTTCCAAGATGTTACCCATCTTCCCCGACCATATAGTTGACTCACACC ACGTTGTTGTGTTATCCATGCTGCCACACTACGCACTTGTTGTCCTCAGG AGCAGTTCCTCACGATCGCCGCCCAATCGTTCCCCGTGACGAAGGCGATG TCGACCGCCGTCGCCCAAGACTGCGCCCGCGCCCGCTTGTTTCGCGCGAG GAAATTGATCGCCGACGTGGCTCGTGAGAGACTCCAGGAAGACACATTGA ACACCATTGCGAGGTTACAATGCTCCAGGGCATCGTGAAAGAGGGCGTTT GTATGCTAAGAAGGCGTTTGTATGCTTTCACCTATATAGAGCTAATGCGT GAATAGAGCTATGCATTCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig967:182325..198693+

>mRNA_F-serratus_M_contig967.20992.1 ID=mRNA_F-serratus_M_contig967.20992.1|Name=mRNA_F-serratus_M_contig967.20992.1|organism=Fucus serratus male|type=CDS|length=1026bp|location=Sequence derived from alignment at F-serratus_M_contig967:182325..198693+ (Fucus serratus male)
ATGAGCGCCACGGGGTTCGGCATTTGCGGGAAAAAGAATGAGTACAGCTC
GAAGACCAAGACCGGAAACTACGTCGAGGACAGATGAGCGCCACGGGGTT
CGGCATTTGCGGGAAAAAGAATGAGTACAGCTCGAAGACCAAGACCGGAA
ACTACGTCGAGGACAGAATCGGCATGGCGCTCGCGGCGAGCTTTGCTAAC
GCCCCACGCCCCCTTATCGGGTCCACGGTGGTTAGAGACGACTTCATCGA
CCCTTCGGAAATGCTAAATTCCAACGAGCCTTGCGAAAAATGCGCGCGGA
TGATGATGTCCGCTGAGAATCGGCATGGCGCTCGCGGCGAGCTTTGCTAA
CGCCCCACGCCCCCTTATCGGGTCCACGGTGGTTAGAGACGACTTCATCG
ACCCTTCGGAAATGCTAAATTCCAACGAGCCTTGCGAAAAATGCGCGCGG
ATGATGATGTCCGCTGAGGATATTCGGACCAAGAATCGCGGGGGCATCTC
CTTCGATCTCCTCCTCGGTCACGCGAGCAACCGCAAGCAAGCCGACGACC
TGAAAAAGGATATTCGGACCAAGAATCGCGGGGGCATCTCCTTCGATCTC
CTCCTCGGTCACGCGAGCAACCGCAAGCAAGCCGACGACCTGAAAAAGGA
GCAGTTCCTCACGATCGCCGCCCAATCGTTCCCCGTGACGAAGGCGATGT
CGACCGCCGTCGCCCAAGACTGCGCCCGCGCCCGCTTGTTTCGCGCGAGG
AAATTGATCGCCGACGTGGCTCGTGAGAGACTCCAGGAAGACACATTGAA
CACCATTGCGAGGTTACAATGCTCCAGGGCATCGTGAGAGCAGTTCCTCA
CGATCGCCGCCCAATCGTTCCCCGTGACGAAGGCGATGTCGACCGCCGTC
GCCCAAGACTGCGCCCGCGCCCGCTTGTTTCGCGCGAGGAAATTGATCGC
CGACGTGGCTCGTGAGAGACTCCAGGAAGACACATTGAACACCATTGCGA
GGTTACAATGCTCCAGGGCATCGTGA
back to top