mRNA_F-serratus_M_contig96.20925.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig96.20925.1
Unique NamemRNA_F-serratus_M_contig96.20925.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A6H5J685_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J685_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 1.200e-73
Identity = 122/205 (59.51%), Postives = 151/205 (73.66%), Query Frame = 1 
Query:   25 CLSAATARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPTAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGITAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPT 639
            C++   ARNLT+ EL+RF ADRTG+ DYAM PAGA VI  +TS+TY+ P +  +E  R K   A   ++S PP AINP SRLGRCWPMKGS G+LTV+L+R I V  +S+EHAPR +LLN G++APK F+V+GYPKG  +  D  G  L+SG EY+LEGD IQ F VA+EYR VEY  +AL V+SNHGE  YTCIYR RVHG P+
Sbjct:  297 CITVDLARNLTRAELERFGADRTGIPDYAMEPAGAHVISRMTSETYEPP-MGLLEWFRSKRRGASLQAVSPPPVAINPESRLGRCWPMKGSDGRLTVKLARTIKVESISLEHAPREVLLNRGVSAPKDFTVVGYPKGRVVRDDDPGDVLVSGGEYRLEGDVIQFFQVAEEYRQVEYDVIALVVDSNHGEGAYTCIYRLRVHGTPS 500
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: D8LC58_ECTSI (Sad1/Unc-84 domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC58_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 5.670e-41
Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 1 
Query:  292 GSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGITAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPT 639
            GS G+LTV+L+R I V  +S+EHAPR +LLN G++APK F+V+GYPKG  +  D  G  L+SG EY+LEGD IQ F+VA+EYR V+Y  +AL V+SNHGE  YTCIYR RVHG P+
Sbjct:   10 GSDGRLTVKLARTIKVESISLEHAPREVLLNKGVSAPKDFTVVGYPKGRVVRDDDPGDVLVSGGEYRLEGDVIQFFEVAEEYRQVDYGVIALVVDSNHGEGAYTCIYRLRVHGTPS 125
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A8E0RWJ0_9TREM (SUN domain-containing protein 1 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RWJ0_9TREM)

HSP 1 Score: 124 bits (312), Expect = 9.710e-28
Identity = 80/199 (40.20%), Postives = 103/199 (51.76%), Query Frame = 1 
Query:   40 TARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPP-TAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHG 630
            T + L  T LQRFAADRTG+AD+A+  AG  ++    + TY   +          IF      +S  P T + P +  G CWP  GSSGQ  +RLS PI +S VS+EH  R L  N  + +APK F +    KG    FD TG  +L    Y + G  IQ F +  +    +Y   A  V SNHG   YTC+YR RVHG
Sbjct: 1007 TIQGLIDTALQRFAADRTGLADFALESAGGAIVGTRCTKTYTDGSAL------FSIFGIPLARLSNSPRTILQPGNNPGECWPFHGSSGQAVIRLSSPIFISAVSLEHLSRTLAPNERLDSAPKDFVI----KGLDSEFDETG-VVLGNFTYNINGPPIQTFAIRNQTDPRQYIEFA--VLSNHGHPLYTCVYRLRVHG 1192
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BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A4E0QYL7_FASHE (SUN domain-containing protein 2 n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0QYL7_FASHE)

HSP 1 Score: 123 bits (308), Expect = 2.720e-27
Identity = 80/203 (39.41%), Postives = 104/203 (51.23%), Query Frame = 1 
Query:   40 TARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPP-TAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPTE 642
            T ++L    LQRFAADRTGMAD+A+  AG  V+    + TY   +          IF      +S  P T + P +  G CWP  GS+GQ  +RLS P+ +S VS+EH PR L  N  + +APK F +    KG     D  G  +L    Y + G +IQ F V  +    +Y   A  V SNHG   YTC+YR RVHG   E
Sbjct:  583 TIQSLIDVALQRFAADRTGMADFALESAGGAVVGTRCTKTYTDGSAL------FSIFGIPLARLSNSPRTILQPGNNPGECWPFHGSTGQAVIRLSAPVLISAVSLEHLPRSLAPNERLDSAPKDFII----KGLDSEDDEEG-IILGNFTYNINGPSIQTFSVHNQTEPRQYIEFA--VLSNHGHPLYTCVYRLRVHGTMPE 772
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A504Y825_FASGI (SUN domain-containing protein 2 n=1 Tax=Fasciola gigantica TaxID=46835 RepID=A0A504Y825_FASGI)

HSP 1 Score: 123 bits (308), Expect = 3.210e-27
Identity = 80/203 (39.41%), Postives = 104/203 (51.23%), Query Frame = 1 
Query:   40 TARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPP-TAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPTE 642
            T ++L    LQRFAADRTGMAD+A+  AG  V+    + TY   +          IF      +S  P T + P +  G CWP  GS+GQ  +RLS P+ +S VS+EH PR L  N  + +APK F +    KG     D  G  +L    Y + G +IQ F V  +    +Y   A  V SNHG   YTC+YR RVHG   E
Sbjct:  957 TIQSLIDVALQRFAADRTGMADFALESAGGAVVGTRCTKTYTDGSAL------FSIFGIPLARLSNSPRTILQPGNNPGECWPFHGSTGQAVIRLSAPVLISAVSLEHLPRSLAPNERLDSAPKDFII----KGLDSEDDEEG-IILGNFTYNINGPSIQTFSVHNQTEPRQYIEFA--VLSNHGHPLYTCVYRLRVHGTMPE 1146
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A1V9XHU3_9ACAR (SUN domain-containing protein 1-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XHU3_9ACAR)

HSP 1 Score: 119 bits (298), Expect = 1.060e-26
Identity = 77/192 (40.10%), Postives = 100/192 (52.08%), Query Frame = 1 
Query:   67 LQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPTAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVE-YAAVALHVESNHGEIGYTCIYRFRVHGAP 636
            L+ + AD+TGMADYA+  AG +V+    ++T+     T M +     F         P  AI P   +G+CWP KGS G L +RLSR + V   ++EH P  L   G I +AP  F V G         D T  TLL    Y   G+ +Q F  AQE  G + +  V L + SNHG I YTC+YRFRVHG P
Sbjct:  248 LKLYDADKTGMADYALESAGGSVLSTRCTETHD----TSMGRYYMFGFIPLFWQRPSPRWAIQPTLAVGQCWPFKGSVGYLVLRLSRRVKVEAFALEHIPASLAPTGNIDSAPNHFQVFGLENE-----DDTDGTLLGNYSYSTAGEPLQHFK-AQETAGDQTFDTVELKILSNHGNIHYTCLYRFRVHGKP 429
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: UPI0010BDDC7E (SUN domain-containing protein 1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BDDC7E)

HSP 1 Score: 116 bits (291), Expect = 2.590e-26
Identity = 78/192 (40.62%), Postives = 99/192 (51.56%), Query Frame = 1 
Query:   67 LQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPTAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVA-QEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAP 636
            L+ + AD+TGMADYA+  AG +V+    S+TY     T M +               P  AI P   +G CWP  GS G L ++LSR IHV   ++EH P  L LNG I +AP  F V G         D  G  LL    Y + G+ +Q F V  Q  R  E+  V L + +NHG I YTC+YRFRVHG P
Sbjct:  152 LKLYDADKTGMADYALESAGGSVLSTRCSETYT----THMGRYYLFGVVPLFWKRPSPRLAIQPTLAVGECWPFVGSVGYLVLQLSRRIHVEAFTLEHIPASLALNGNIDSAPNDFEVYGMDSAE----DKAGF-LLGRYNYSITGEPLQNFKVQHQTERTFEF--VELKILTNHGNIHYTCLYRFRVHGKP 332
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A154P7G3_DUFNO (SUN domain-containing protein 1 (Fragment) n=2 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154P7G3_DUFNO)

HSP 1 Score: 114 bits (285), Expect = 2.880e-26
Identity = 77/209 (36.84%), Postives = 101/209 (48.33%), Query Frame = 1 
Query:   28 LSAATARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQ--PNLTPMEKLRRKIFDAERGSISGPPTAINPVSRL-GRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPTE 642
            +S  T R+L +TELQ + AD+TG  DYA+G +G  ++    ++TY    P L        K F          P A+     L G CW  KGSSG + ++L  P+HVS VS+EH P  +   G   TAPK FS+ G         D T         Y   G  IQ F++  E +   Y  V L V SN G   YTCIYR RVHG  ++
Sbjct:   53 MSPETVRDLVRTELQTYDADKTGRTDYALGSSGGAILTTRNTETYSAGAPVL--------KFFGIPLCQQQNTPQAVIQTGVLPGECWAFKGSSGSVVIQLLGPVHVSGVSLEHIPETISPTGETSTAPKDFSLWGLDC-----VDDTHPFFFGDFMYDNTGPPIQYFEIQTEPKK-PYKIVELKVHSNSGNNEYTCIYRIRVHGTLSQ 247
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: UPI001054F344 (SUN domain-containing protein 1-like isoform X1 n=3 Tax=Gouania willdenowi TaxID=441366 RepID=UPI001054F344)

HSP 1 Score: 120 bits (300), Expect = 3.170e-26
Identity = 81/212 (38.21%), Postives = 108/212 (50.94%), Query Frame = 1 
Query:    7 EEKEGDCLSAATARNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPTAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHGAPT 639
            EE   D +++   R +    L+RF+ DRTGMADYA+   G T++    S+TY+    T    L    F     S S P   I P   LG CWP +GSSG L +RLS  I     S+EH P+ L  +G + +AP+ F V G       G      TLL    Y+ +GD +Q F V +E     +  + L V SN G   YTC+YRFRVHG P+
Sbjct:  623 EETAADAVTSEEVRLIVSDALRRFSEDRTGMADYALESGGGTILSTRCSETYE----TNTALLTLFGFPLWYFSQS-PRVVIQPNIHLGNCWPFRGSSGFLVIRLSMEILPLSFSLEHIPKALTADGKLLSAPRDFEVYGLH-----GEAEEDGTLLGTFTYEQDGDALQTFSVMEENHQT-FHIIELKVLSNWGHPVYTCLYRFRVHGTPS 823
[Close]
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Match: A0A4Y2XE11_ARAVE (SUN domain-containing protein 1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2XE11_ARAVE)

HSP 1 Score: 113 bits (283), Expect = 1.130e-25
Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 1 
Query:   46 RNLTKTELQRFAADRTGMADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPTAINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGI-TAPKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGVEYAAVALHVESNHGEIGYTCIYRFRVHG 630
            R + K  L  + AD+TG  DYA+   G +++    S++Y + N      L   ++  E    + P TAI P  + G+CW  KGS G L ++LS  I+ +  ++EH P  L  +G I +APK FSV G    +   F+ T   LL    ++++G+ +Q F+V Q    V ++ V L + SNHG + YTC+YRFRVHG
Sbjct:   92 RRIVKEALLLYDADKTGKVDYALESGGGSILSTRCSESYVEKNGR-FTVLGLPLWSDE----NSPRTAIQPDVQPGKCWAFKGSQGYLVIQLSYTIYPTGFTLEHIPVSLSPSGSIDSAPKDFSVWGLS--SEKDFEGT---LLGRYTFEIDGEPLQYFEV-QNLTSVPFSLVELKIHSNHGNLEYTCLYRFRVHG 276
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J685_9PHAE1.200e-7359.51SUN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LC58_ECTSI5.670e-4160.34Sad1/Unc-84 domain-containing protein, putative n=... [more]
A0A8E0RWJ0_9TREM9.710e-2840.20SUN domain-containing protein 1 n=1 Tax=Fasciolops... [more]
A0A4E0QYL7_FASHE2.720e-2739.41SUN domain-containing protein 2 n=1 Tax=Fasciola h... [more]
A0A504Y825_FASGI3.210e-2739.41SUN domain-containing protein 2 n=1 Tax=Fasciola g... [more]
A0A1V9XHU3_9ACAR1.060e-2640.10SUN domain-containing protein 1-like n=1 Tax=Tropi... [more]
UPI0010BDDC7E2.590e-2640.63SUN domain-containing protein 1 n=1 Tax=Galendromu... [more]
A0A154P7G3_DUFNO2.880e-2636.84SUN domain-containing protein 1 (Fragment) n=2 Tax... [more]
UPI001054F3443.170e-2638.21SUN domain-containing protein 1-like isoform X1 n=... [more]
A0A4Y2XE11_ARAVE1.130e-2536.22SUN domain-containing protein 1 n=1 Tax=Araneus ve... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:764493..772913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.8
Seed ortholog evalue1.2e-33
Seed eggNOG ortholog2880.D8LC58
Preferred nameSUN3
KEGG koko:K06545,ko:K19347,ko:K21874,ko:K21875,ko:K21876
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000724,GO:0000725,GO:0003006,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005856,GO:0005874,GO:0005929,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010256,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031090,GO:0031224,GO:0031514,GO:0031965,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032991,GO:0033036,GO:0033554,GO:0034613,GO:0034641,GO:0034992,GO:0034993,GO:0036126,GO:0042802,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043495,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0045185,GO:0046483,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048856,GO:0048869,GO:0050896,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071840,GO:0090286,GO:0090304,GO:0097223,GO:0097224,GO:0097729,GO:0098796,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0106083,GO:0106094,GO:0120025,GO:0120038,GO:1901360
EggNOG free text desc.cytoskeletal anchoring at nuclear membrane
EggNOG OGsKOG2687@1,KOG2687@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04090
Exons6
Model size1024
Cds size558
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20925.1prot_F-serratus_M_contig96.20925.1Fucus serratus malepolypeptideF-serratus_M_contig96 764863..772019 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932728.704577-UTR-F-serratus_M_contig96:764492..7648621622932728.704577-UTR-F-serratus_M_contig96:764492..764862Fucus serratus maleUTRF-serratus_M_contig96 764493..764862 -
1690964444.2668347-UTR-F-serratus_M_contig96:764492..7648621690964444.2668347-UTR-F-serratus_M_contig96:764492..764862Fucus serratus maleUTRF-serratus_M_contig96 764493..764862 -
1622932728.8073626-UTR-F-serratus_M_contig96:772019..7720411622932728.8073626-UTR-F-serratus_M_contig96:772019..772041Fucus serratus maleUTRF-serratus_M_contig96 772020..772041 -
1690964444.3382485-UTR-F-serratus_M_contig96:772019..7720411690964444.3382485-UTR-F-serratus_M_contig96:772019..772041Fucus serratus maleUTRF-serratus_M_contig96 772020..772041 -
1622932728.8540614-UTR-F-serratus_M_contig96:772839..7729131622932728.8540614-UTR-F-serratus_M_contig96:772839..772913Fucus serratus maleUTRF-serratus_M_contig96 772840..772913 -
1690964444.3512056-UTR-F-serratus_M_contig96:772839..7729131690964444.3512056-UTR-F-serratus_M_contig96:772839..772913Fucus serratus maleUTRF-serratus_M_contig96 772840..772913 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932728.7251315-CDS-F-serratus_M_contig96:764862..7649741622932728.7251315-CDS-F-serratus_M_contig96:764862..764974Fucus serratus maleCDSF-serratus_M_contig96 764863..764974 -
1690964444.2836978-CDS-F-serratus_M_contig96:764862..7649741690964444.2836978-CDS-F-serratus_M_contig96:764862..764974Fucus serratus maleCDSF-serratus_M_contig96 764863..764974 -
1622932728.7380176-CDS-F-serratus_M_contig96:768288..7684091622932728.7380176-CDS-F-serratus_M_contig96:768288..768409Fucus serratus maleCDSF-serratus_M_contig96 768289..768409 -
1690964444.293233-CDS-F-serratus_M_contig96:768288..7684091690964444.293233-CDS-F-serratus_M_contig96:768288..768409Fucus serratus maleCDSF-serratus_M_contig96 768289..768409 -
1622932728.7611227-CDS-F-serratus_M_contig96:768861..7689901622932728.7611227-CDS-F-serratus_M_contig96:768861..768990Fucus serratus maleCDSF-serratus_M_contig96 768862..768990 -
1690964444.3026438-CDS-F-serratus_M_contig96:768861..7689901690964444.3026438-CDS-F-serratus_M_contig96:768861..768990Fucus serratus maleCDSF-serratus_M_contig96 768862..768990 -
1622932728.7741961-CDS-F-serratus_M_contig96:770224..7703481622932728.7741961-CDS-F-serratus_M_contig96:770224..770348Fucus serratus maleCDSF-serratus_M_contig96 770225..770348 -
1690964444.312999-CDS-F-serratus_M_contig96:770224..7703481690964444.312999-CDS-F-serratus_M_contig96:770224..770348Fucus serratus maleCDSF-serratus_M_contig96 770225..770348 -
1622932728.7885711-CDS-F-serratus_M_contig96:771947..7720191622932728.7885711-CDS-F-serratus_M_contig96:771947..772019Fucus serratus maleCDSF-serratus_M_contig96 771948..772019 -
1690964444.324862-CDS-F-serratus_M_contig96:771947..7720191690964444.324862-CDS-F-serratus_M_contig96:771947..772019Fucus serratus maleCDSF-serratus_M_contig96 771948..772019 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig96.20925.1

>prot_F-serratus_M_contig96.20925.1 ID=prot_F-serratus_M_contig96.20925.1|Name=mRNA_F-serratus_M_contig96.20925.1|organism=Fucus serratus male|type=polypeptide|length=186bp
MADYAMGPAGATVIFPLTSDTYQQPNLTPMEKLRRKIFDAERGSISGPPT
AINPVSRLGRCWPMKGSSGQLTVRLSRPIHVSVVSIEHAPRILLLNGGIT
APKSFSVIGYPKGTRLGFDSTGHTLLSGAEYKLEGDNIQLFDVAQEYRGV
EYAAVALHVESNHGEIGYTCIYRFRVHGAPTEAIE*
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mRNA from alignment at F-serratus_M_contig96:764493..772913-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig96.20925.1 ID=mRNA_F-serratus_M_contig96.20925.1|Name=mRNA_F-serratus_M_contig96.20925.1|organism=Fucus serratus male|type=mRNA|length=8421bp|location=Sequence derived from alignment at F-serratus_M_contig96:764493..772913- (Fucus serratus male)
CAGGAGGAGGAGAAGGAGGGAGATTGCTTGTCCGCCGCGACGGCGAGAAA
CCTCACCAAGACGGAGCTGCAGAGGTATGTATGTCATGTCAGTGTGAGAG
GCAGTAGGGGTGTACAGGTAGAGGAATATCGTTCACGAGTATTAAGACAT
GAGAAGGCAGAAACGTTACATTATTATTGATAGGTGTAATACTATTAATA
GTCTGTATGTGTGTGTTGTGTGATGTCATCCTATTTATTCTGGACGTCAG
GCTTGTGGACCGTCAGTCGGGGTCACACAGGATTTCTCCTCCTTCCTTCT
GCGGTGCTTGCCTTAATTTTTATGTCCTTCCTTTCTCTCGTCGACGTGAA
GTCGAATTTTGTGTACTTACGACTTACTTGTTCTCCACTTGTTGGGCATA
TATATATATATTTATTTTTGTGAAAAAAATTCCAGTTCGTGTGACTGCAC
CGGGATTCGAACTCACGTCCCAACGTCAGAAGGTTTCGAGGTTACATGTA
GTGTTGCTATTGTGCTATACGGTACACGGAGTGTTTCGTGGACAGGAGAT
ACTGTACTGTACTGTGCTGTACCTCTCCTCGTTGCCTCTTGGTGTTAATC
AATCTCCTCTTTGTTTTTATTTTCGAGCGCGTCCATTCGACCGTCCTGAA
ACTGGATGATAAAGTATTAATTTAGTCAATTAATTAATAACCAACAACTA
CTGCATTTTTCTATTTTTCTATTTTTCTTCTCGTATTTTTCGGAGGGAAG
AGAGGGGAGGGCAAGGGCAAGAGGGTTCTATTTTTTACTTTATTTTGTTT
TTCAGGAGTAATAGTATTACACCCCATTTCCTTTCTATTCGTAACTTTAA
TCATGTTCACCTCACCTCGCAGATTTGCGGCGGATCGAACAGGAATGGCC
GACTACGCCATGGGTCCGGCGGGTGCCACAGTGATATTCCCGCTCACAAG
CGACACTTACCAGCAGGTGCGCTGGAAGCGCTCGAGGGGTCGAGAGGGAA
TATGATGAGTATCTATCTCCACTTACTCGAGGACGGGTGATTTCACAATT
CGATCAGTCTCGTAGGACAAGAGGATATTGATGTGTCTTGGGAGTCAGGG
GATGAGTCGCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTCCCTTCCTTCCCTGGGAGAGGAGAGGAGAGGAGAGGAGAGGCTTCCTT
GATACCGCCTCCCTATACATTACGGTATGACGCTCTAAAGGGTTACTGCT
CTCCAGTTGCGCAGTCTCTGCCTCAACATGCGAGGTTATTAATGTTACTA
TTAATAGCGACATCCTCCATTGTTAATGTTAGTGTTAATGTTACTGTATA
CAGTATAGAGTTCAACATGCGAGGTTATAAATATTAATAGCGACATCCTT
CATTGTTATTGTTAATGTTACAGTATACAGCTGCAGCATAATGCTACAGT
ATAGAGGAACAGTATGTAGCCACAATAAATAACTACAGTATAAAGTTACA
AAATCGAGCTACGGCATTGAGCGACAGCGTAGAGTTACAGTACAGAGATA
CAGCATAGAGCTACAAAATAGAGCTACAGCATAGAGCTACAGTATGAAGC
TACAGCAATCATGGCCTTCGTGAAAGATAAAACCTTACTACAATCGAGCC
TAAAAAATCGGCAGTCCTCAAAAATCTCAACTAATAAAAAAGTAAAGGGA
ATGACAATTTGCCCCACCGGTGGGCCATACCCAAATTTATCCCACCACCT
GGATCTCGCGTCAGAAGACACGGTTGGTCACAAAACATGCACGAGTGTGT
TGGCGCGTTGCAGGGCTATCATGGGGTCATTCGTGCAGCTCAAACGGTCC
TGTCTGCGTGATGTTACGGCCGGTGGGGTGGTTGGTGTTTTCTGGTGTGT
AAGGGCAAATAGCATACCAGAAAACACCAACCACCCCACCGGCCGTGGTA
GCACGTAAACGGAACCGTTTGGGCTGCACGATAGACCCCATGATAGCTAA
CCATAACACACCCATGCATGTACTGTGACCAACCAAGTCTTCTGGCGCGA
GAGCCAGGTGGGGGGGTAAACAAGAGAATAGCCCACCGGTGGGCCAGATA
GCCATACCCAAAAAGAAACGCCATCGGTAGTACGGGATGTAAAACCTTAT
ATACTCTAGTGTAGTGGCGGATCAAGGTCAGGGGTCAGGGGGGACTAACT
AAGTAACTAATGTTCACCTCGTGTCGAGAAAACTCGATCGATGATCCTAT
CGGTTGGAGGCGGTCACCAGTACTGGTACAGTGTCACTCATGTCTTTTCC
GGCTCAGACAGTGGCAAAAAAAAAACAGACGAACGACTGACTCTTGAAAG
TTTAAAGTTGGCTTGGCGTTCTTGTGCGTTACTAATGGTCTCACAATGTA
CCTTAACGCGTGGTTCTAACAGGTCTAGAGCTAACCGTCCTGTCCTGTCC
CGTCCCGTCCCGTCCCGTCCCGTCCCCACCGTTTTCCGTGCGGATGGCGC
AACTCGACGTGTCAGCCAAACCTGACCCCGATGGAGAAACTTCGCAGAAA
AATCTTCGACGCCGAACGAGGATCTATCAGTGGGCCCCCGACCGCCATCA
ATCCTGTCTCTCGGCTAGGCAGATGCTGGCCGATGAAGGGTCAGTGCAGC
CACTGCCCCTTCCCATGCCGTTTGTGTTTCTTGCGTGCTCGTTTTTTCTT
TCTTTCCCTCTCTTTTTTTAATAATATTGTTAGTAGCGATGGTGATAGCT
AGTGCGGTGTTTTTCTCTGTTTATGAAGCGTTTTTGTGTTTGTTATCGTT
ACACGTATTGTTATCAAATTGCACATAACCGCGCAATCCGGCCCTGTCAG
CGCACGTAGTCATTCTGTGCCACTGGTATTGGTCCTCCCCAAGGGGCGAT
CAAGGTCTGCGTGTGTGTATGTGAGTGTATGTATTTATTAGATTGCTCAC
AGCCGCGCAATCCAGCCCTGTCATCCTAGTCATTCTATGCCACTCGCATT
GATCCCTTAATACCAAGAGGGGTATCAATGATACGTGTGTGTGTGTGCTG
TCTGCCGGCGCCTCAAAAAACGTCGCTCATTTATTTCCAAGTCTAGCTCG
CGCGCCGCCAGTATACCCCCCCCCCCTCCTCCTATACATTAATATCAATA
CACTGTAGATATATATGTATATATATGTGCTGTAGGTGCTTTACATCAGC
TGCATACCATCTACAGTAGTACCAGATAGCTCCTCATCCGATATTCTAGA
GCCTATCTATACATCTATGTACCTATCTAAATAAATAAATAAAGCACACT
ACATGTACAGAGTGCTGCACCCATGTTCACATGGTGTATGTTCCGATTGA
GATAGCTCCCGGCTCCAAAGGAATTCGATACTTTGTACGGCAAGATCAAT
ACCGTCACTTCTGACACTGGACTCATAGGACATGTAGGACATATAGGATA
TGGAATATGTAGCTTGAGAGGGTATGGCCTATTACAAGCAGGTTAGCAGG
GTTATACTTTTTTCTGGTGCAGATTATTTTGGAATCCGACCTACCCTCGT
GTTTGTTTATCCTATAAATATTACCTGGTTCTATGAATAGTGCTATAAAT
AGTAGTATAAATAGTTCCGTGATACTACTGTAAGCAATGGTGTGCACGAG
CTCTAGAGCTACATTCACATTTAACATTTCATGTTGTGCATGAAGCATAT
GGGGATGCGAGTCGAAGTTATTAATGTTAATATTTTAATAGTTTTAATAT
TATAGTTGAGAAATGTATTAATATCGTTTTGTGTATTGGAAATGCTTCGA
TTTTTGTTGTTGAGTTTTTCATGGTTTCTTGTGTGTCTCGGCTCCGACTT
GACTTGGCTTGGCTTGACCGCAGGATCGAGCGGGCAGCTGACGGTCCGAT
TGTCGCGGCCGATCCACGTATCTGTGGTTTCCATCGAGCACGCGCCAAGG
ATTTTGCTGCTGAATGGGGGGATCACGGCACCGAAAAGCTTCAGCGTAAT
CGGTGAGAAATAATGTGGAGTAGAGTATGAAAAGAGGGAAAACATACCAT
ACCAAGCATGCGTTATATTATCAGGGGGGTGGGTTTACCGGGGGGTTTTG
TAATTTTTTCTCCGGCGTTTCTCCCCCTACTGTCAAGTTTAGAGTAGTGT
AAAATTGTGCAGTGTAGTGTACTGTAGTGTAGTTTTTTCTTTCATGAAGA
AGTACAAGGTGTTACCGGTACCATGGGCGGCCGTGTGTCATCTCCTCGCC
TCGTGTCAGCGCCTCGTGTCAGCCCAAACATTCTCCGATGCAACCGCAAA
AGGATCAAGGAAAGTTCTTGCGCATCGGCCAGAGGAGCTCAGCCTCCCAC
CCCTCTCACCTATATGACGACCCTAACAGTACAACGACACAACGACAACT
ATAGCGATACCAAAAGAAAACGCCTCCTTCGGTCGTGGTGCCGAGTGTCG
GCAGGTTACCCAAAAGGAACGCGGTTAGGCTTCGACTCGACGGGTCATAC
GCTGCTGAGCGGTGCGGAGTATAAGCTTGAGGGGGATAACATCCAGTTGT
TCGATGTGGCGCAGGAGTACAGAGGGTATGTGGGATGAATGTTGAATTTT
GATCTTTATTATTAGTACTGCCATCATTATTGTTTTCGAAACTATTATTA
ATATTATACATTTACTATATTGTACTTTAATAATAATACTATTAGACTAT
TAATTAACAATAATAATGTTGTATTTTTATATTAATGTTAATATCTATTA
TATTAATGTTAATATCACTGTCGGCCCTTCGTTGCACACAGTTTCCAGAA
TAGCTACAACTAGAGTCTACCGTCATAGTTTATACCAGTTATACCAGTAG
CTTTCTAGAATATACGTACTATTAATATTAGTATTCAGCCAAAGTTTATG
TTGCAAAATTTGGAAACGAGCGTTGCACAGTTTGGAAATGAGCAGTTTAA
ACCGTGTTTCAGCGGTTCGGATACAGTATGTTCGACAAAGTACTGTAATT
TTGGACAGGAATAATTATATATATATATATATATATTATATATATTCCCC
AACCGCAATCTATTCAACACACCAAACATCAATTACTTCCACAAAGCTGA
CGACTCAAACTCTCACTGATTAAGGCAACACTGGCAAGAGATGTGCCAAG
TTTGAGACAAGGAGATAGATAGCCCGGGGGCATTACAGTGACAATCTGCG
TGTGAGGGGCTGATGATACTAAAATAATGTACCATAAAATAAACTGTAAG
GGACAAATGAGACTAAAATAATGTACCATAAAATAAACTGTAAGGGACTA
CTGCTATCTAAATCTTCTCGTTGTGTGTGTGAGAGAGAGAGAGAGAGAAA
GAGCATTGATAGCCACTATTAATATTTTAATAATTAGAAAGATCTCCATT
AATAATTAATACCTGTAATAATTAGTCCACGTGACGGCACGAGCGCTTCG
CATCTCTTGTCTTACTCTTATTAATAGTATAATAGTATAATTAATAGTAT
AATCAATATTGATAGGTGACGGGGTGGCTTACACCCGTCATGATACTGAT
GGTTTGCAGCGCACCTTCTCCCCCAGCAGGGTGTAATTTCCAAAATGTTG
AAGTCCAAAGTTGGAACGATTTTTTTTTGAAATCATTACCTCACTTTAGT
TCCAACCTTTGGAACTAACGCTTCCGATAAACCTTCCAAGAATTGGAAGG
CTTCCAAATTTCGGAATTCTTTGGCTTCGTTTCAGCCGATCCTATCCTTA
CAAGTAGATGTAACTCCTGTCCTGGGGATTTTTTTCGCGTTCTATAGTGT
ACTGGTAGCAGATTATTTGAAGGATTATCCTATTAATAGCACTATTAATA
CTTGCAGAACCTCTTTTTCATTTTTGTTCCACCAACGATACCATTACCAT
TACCATTACCATTACCATTCCAATTCGACGATACTATACCATTCGCGCAA
GAAGCAAACGTTCGCGAGGTGGGAATCGAGCCATCATGGACGACATTGCA
GGATACAGCCAGTACATATCATTGACGTTGTCAATATCAATTAATACCAG
TAAATTAACTACTTGGAGTTACCTGTTATTATTTGTTCCTCCTACATACT
GGTACATAAATAGTGGTACGTAATAACCTCGCAGACGATTATTGCAGAAG
TTGTGAGTTTAGATCTTGACAGACTCAGGTATTTTATTTTGGATTCCGTG
TATTAATAGTGTATTAGTCTAATAGCGGAAAGCGCGAGAACGTGAGTAAG
TAAAAAATCAACCATTGGTTGACGAGTTGTTTGTAAGAGTGCTGGACTTG
CATCGCGATAAAATAAATCGCAAGGTGGGAACCAGGGAGAGGTGGGAAGA
CCCTTAGTGACCATGGTCTACATAGGCAGGATGGCAACGTTGCAGTGGGT
GGGATTGGTGAGCTAGCACGTTGAGGCCTATCGACCATACTAATAGTAAG
TAAGATACAAACAGAAACAAACAAACTCGTAACCCCAATTTACTAACATT
TAGGGTGTAGTTTTCTTTAATCGTGGCATGCGTTTATGGTAAGGGGATGT
TACACCTCGACTCGCTATTAATAGTCATATTCAGTGATTTCTGCGGCAAG
GTTCTGCTCCGAAGTAGAACATAGTAGTTTTGTGTAGTGTGGTATCGTGT
AGGGTCATTAATATTAATAGTGTATAGTAATGCAGTAGAGTGTACGGTGT
ACGGTGGCGCGCTATTTAATTGTTTAGTCGAGTTCACTGTGTAGTGTTGT
GTAGCGGATTGTATTGATAGTGTCTACGGTACTTTCAACATGCTATGACT
ATTAGTATTCCCACTTCATACCAATAATAGTGGATGTGGGAAAGAGAGGC
GCAAATTAATTCGTCCATGGTGACCTGCCAAGGTAGCACCCTTTTGGAAC
TACCTTGAGGATTACTGGCCCTTTGCCGGCGAACTCTCAGCAGTAAATGC
CATCGGTACGCAATTGCGTGACCCGATACATTCGGGACTGGCCCGATGGC
GTATGATGGTTTAAATAAATAAATGGACACCGCCGCGGAACTCGGGAGGA
ATCCCATAAGTAAGCACCAGATTAGGCCTGAGTATGGAGATGAGCAGGCT
GACGCGGGACGGGACTGCCGAACCCGTCTCGCGAGACCAAATTTTCAGGC
GCAACCGGGGACAGGGACATATTTATTTTCCCCGTTCAGCTGACCTCGAG
CAGGATTGGCAAACCTTACCCGGTTGATCCATACTCTTGCTATATATGTG
ATGATGATGACCATACATTGATATGAATACTGCTGTACAACTGTGCTGTA
AGAAGCTGATCAGGACGACACTTAGGCAACCTTCAATCGTGGAGGGTCGG
TCGGTCTTAATCCCTACCACATTATTCTGAAGTAAACGACATCCGAATGT
AATGTAGTGCTCGAACGTTGGCCATACGGTCGGGTAGGGTGGAGGATTCA
TAACGCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCATACCTGCTAGTGC
GGAAGTCGTGAGTTCGATTCTTAGCTTATAATTTGTGTTCTTCCTTTCGT
AACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCATTAGTTGACG
AGTTATAAGAGTGCTGAACTTGCATCGCGATAAAAATTGCAAGGCGTGAA
CCAGGGAGAGTTGGGAAGATCCTTTGTGACCACAGGCGGGATGGTAATTA
GAGGCCCTTCGGCTATAGCCCTTTCCCTTGTTGAGGGAGTCATGATTGGA
CCAAGATGATTTCGCCAGCACAAAATGTAAGTGTACATTTAAGTTCAGGC
TCTCGAGCAGGAGAGCTGCTGAATGTACCACCCTTATCCCCGCACCCCCG
TCCCTTCTAAAAGCAAATCCCGATGATGACGCCTCGCAGGGTGGAATACG
CGGCGGTGGCGTTACACGTGGAGAGCAATCACGGCGAGATCGGCTACACA
TGTATCTACAGGTTCCGCGTGCACGGTGCGCCCACAGAAGCAATCGAGTG
ATTTTAATACAGTGTAATACATCGTGTATTACGTTACAGCATCCCTGCTA
ATGACGAGGGAAAGACAACTGATTGGGTAGGAGGAAAGGTGGTGCAAACG
TCAGTGCTGCACTGCATGTAGTATACAGTATATTTCCTCGTTTCTTCCGT
GCGCTAAAGGGGGCTACACTAGACCCTCAGCATGGAGCGGCATCAATCGT
CCTCGGTGGTGTTAAGATACCCATGCTTAGTGTATAGTGTATACCGTAGT
GTATAGTGTGTCGCACGCTGATTTTGCCTTTTGGTGGCATCGTGATTACA
GTACCGCCCTGAGCACTTTGTAGGGGTGAGGGGTTTCTCGGATGCTGCCA
AAGTTTCTTTCCTAGGAGGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig96:764493..772913-

>mRNA_F-serratus_M_contig96.20925.1 ID=mRNA_F-serratus_M_contig96.20925.1|Name=mRNA_F-serratus_M_contig96.20925.1|organism=Fucus serratus male|type=CDS|length=1116bp|location=Sequence derived from alignment at F-serratus_M_contig96:764493..772913- (Fucus serratus male)
ATGGCCGACTACGCCATGGGTCCGGCGGGTGCCACAGTGATATTCCCGCT
CACAAGCGACACTTACCAGCAGATGGCCGACTACGCCATGGGTCCGGCGG
GTGCCACAGTGATATTCCCGCTCACAAGCGACACTTACCAGCAGCCAAAC
CTGACCCCGATGGAGAAACTTCGCAGAAAAATCTTCGACGCCGAACGAGG
ATCTATCAGTGGGCCCCCGACCGCCATCAATCCTGTCTCTCGGCTAGGCA
GATGCTGGCCGATGAAGGCCAAACCTGACCCCGATGGAGAAACTTCGCAG
AAAAATCTTCGACGCCGAACGAGGATCTATCAGTGGGCCCCCGACCGCCA
TCAATCCTGTCTCTCGGCTAGGCAGATGCTGGCCGATGAAGGGATCGAGC
GGGCAGCTGACGGTCCGATTGTCGCGGCCGATCCACGTATCTGTGGTTTC
CATCGAGCACGCGCCAAGGATTTTGCTGCTGAATGGGGGGATCACGGCAC
CGAAAAGCTTCAGCGTAATCGGATCGAGCGGGCAGCTGACGGTCCGATTG
TCGCGGCCGATCCACGTATCTGTGGTTTCCATCGAGCACGCGCCAAGGAT
TTTGCTGCTGAATGGGGGGATCACGGCACCGAAAAGCTTCAGCGTAATCG
GTTACCCAAAAGGAACGCGGTTAGGCTTCGACTCGACGGGTCATACGCTG
CTGAGCGGTGCGGAGTATAAGCTTGAGGGGGATAACATCCAGTTGTTCGA
TGTGGCGCAGGAGTACAGAGGGTTACCCAAAAGGAACGCGGTTAGGCTTC
GACTCGACGGGTCATACGCTGCTGAGCGGTGCGGAGTATAAGCTTGAGGG
GGATAACATCCAGTTGTTCGATGTGGCGCAGGAGTACAGAGGGGTGGAAT
ACGCGGCGGTGGCGTTACACGTGGAGAGCAATCACGGCGAGATCGGCTAC
ACATGTATCTACAGGTTCCGCGTGCACGGTGCGCCCACAGAAGCAATCGA
GTGAGGTGGAATACGCGGCGGTGGCGTTACACGTGGAGAGCAATCACGGC
GAGATCGGCTACACATGTATCTACAGGTTCCGCGTGCACGGTGCGCCCAC
AGAAGCAATCGAGTGA
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