mRNA_F-serratus_M_contig95.20833.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: D7G571_ECTSI (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G571_ECTSI) HSP 1 Score: 240 bits (613), Expect = 2.980e-73 Identity = 126/177 (71.19%), Postives = 138/177 (77.97%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGAD--DKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIRKVK 525 YAGRAS+ PCLDLFITLLSMG+EGWRRLLA+RE LVEPFRRRLR+VAE NGERLLES GNTISFA+TLD+LVR+Q A + G GA P SA+ GSMLFTRCVSGTRVV R Q K V G+DF GYGASV YPHDYLTAACA GLST ELDEF+ RLDK +RK K Sbjct: 310 YAGRASSGPCLDLFITLLSMGQEGWRRLLAERETLVEPFRRRLREVAESNGERLLESSGNTISFAVTLDSLVRKQSTAACALESNGVTGTASGA-----PASAAFFGSMLFTRCVSGTRVVPREQHKCVGGIDFNGYGASVTGYPHDYLTAACAAGLSTEELDEFLIRLDKALRKAK 481
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A1Z5KK06_FISSO (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK06_FISSO) HSP 1 Score: 169 bits (429), Expect = 7.830e-47 Identity = 93/175 (53.14%), Postives = 124/175 (70.86%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIRKVK 525 YAGRAS++P LDLFITLLSMG +G+++LL DR+ +E F +RL VAE +GERLL+ NTISF ITLDTL R + D+ E + P+SA LG+MLF+RCVSGTRV+ R ++K++ G F G+G+S +PH Y+TAACAIG+ +E+DEF+ RLDKTI + K Sbjct: 316 YAGRASSSPILDLFITLLSMGLKGYQKLLQDRQQALENFAQRLSAVAEKHGERLLQCPSNTISFGITLDTLARPRDESEDETAYLESIRK-------PISA--LGAMLFSRCVSGTRVIPRLEQKTMGGQVFAGFGSSHDAFPHAYMTAACAIGVHPSEVDEFLVRLDKTIHEFK 481
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A1E7FQQ3_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQQ3_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.290e-46 Identity = 89/184 (48.37%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIRKVKGGASKMSRE 552 YAGRAS++P +DLFITLLSMG G++RLL +R +++E F RLR+VAE +GER+L NT+SF +TLD L R ++ D+ + + G+MLF+RCVSGTRVV R Q KS+ G DF G+G+S YPH Y+TAACAIG+S E++EF RLDKT+ + K K +++ Sbjct: 332 YAGRASSSPIVDLFITLLSMGMNGYKRLLKERTSVLETFPERLREVAEKHGERILVCPNNTVSFGLTLDGLARPKEVDELDENYTQS---------TAKEITSFGAMLFSRCVSGTRVVPRSQLKSIGGQDFIGFGSSTNEYPHAYMTAACAIGVSIFEIEEFYVRLDKTLTEFKRKKKKKAQK 506
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A7S0Y830_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y830_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.130e-45 Identity = 95/184 (51.63%), Postives = 124/184 (67.39%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIRKVKGGASKMSRE 552 YAGRAS++P +DLFITLLSMG G++RLL +R ++E F +RL VAE +GERLL NTISF +TLD L R ++ DD E QD + +I S G+MLF+RCVSGTRVV R Q K + G F G+G+S YP+ Y+TAACAIG+S E+DEF RLDKT+++ K K S++ Sbjct: 329 YAGRASSSPIVDLFITLLSMGLTGYKRLLKERTEILETFPQRLSAVAEKHGERLLICPNNTISFGVTLDGLARPKQ---DD----ESDQDYTK--SIDKEISSFGAMLFSRCVSGTRVVPRSQLKIMGGETFVGFGSSTEQYPYAYMTAACAIGVSLQEIDEFYVRLDKTLKEFKTKKKKKSQK 503
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A448Z7C0_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7C0_9STRA) HSP 1 Score: 164 bits (416), Expect = 9.920e-45 Identity = 90/184 (48.91%), Postives = 123/184 (66.85%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIRKVKGGASKMSRE 552 YAGRAS++P +DLFITLLSMG G++RLL +R ++E F ++L++++E +GERLL NTISF +TLD L R + DD E +D + +I S G+MLF+RCVSGTRVV R Q K + G F G+G+S YPH Y+TAACAIG+S E++EF RLDKT+ + + K + E Sbjct: 340 YAGRASSSPIVDLFITLLSMGMNGYKRLLKERTTILETFPKKLQEISEKHGERLLSCPANTISFGLTLDGLARPK---LDD----ESEEDYTK--SIGKEISSFGAMLFSRCVSGTRVVPRSQLKIMGGESFVGFGSSTSQYPHAYMTAACAIGVSIQEVEEFYVRLDKTLTEFETKKKKKTEE 514
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A7S1ZJX1_TRICV (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJX1_TRICV) HSP 1 Score: 159 bits (403), Expect = 7.600e-44 Identity = 88/172 (51.16%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIR 516 Y GRAS+AP LDLFITLLSMG +G+R LL +R E F ++ +VA+ +GER L NTISF ITLD L + G DD G ++ L AS GSMLFTRCVSGTRVV R Q K + G F G+G+S ++PH YLTAACAIG++ E +EF RLD+ + Sbjct: 205 YPGRASSAPVLDLFITLLSMGMDGYRSLLEERATYAEAFAKKFEEVAKKHGERALVCPRNTISFGITLDKL----EGGDDDDGDIGGPEEK-----TSLDASYFGSMLFTRCVSGTRVVPRSQTKKMGGDTFRGFGSSTEDFPHSYLTAACAIGMTRDEAEEFFSRLDRAFK 367
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A7S4IXG5_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXG5_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.630e-43 Identity = 89/172 (51.74%), Postives = 111/172 (64.53%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIR 516 Y GRAS +P LDLFITLLSMG +G++ LLA+R LV F ++LR VAE +GER+L NTISF +TLD L Q ++D S+E S GS+LF RCVSGTRVV RGQ K + FEG+G+S N+ H YLTAACAIG+S A++DEF RL K + Sbjct: 230 YPGRASGSPILDLFITLLSMGLDGYKGLLAERRRLVGVFEQKLRSVAEKHGERMLVCPRNTISFGVTLDHLTGSQ---SEDGDSSE--------------VSYFGSILFMRCVSGTRVVPRGQDKKMGNDLFEGFGSSTSNFAHSYLTAACAIGVSEADIDEFSNRLGKAFK 384
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: B7FV74_PHATC (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV74_PHATC) HSP 1 Score: 158 bits (400), Expect = 1.980e-42 Identity = 88/171 (51.46%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTI 513 YAGRASA+P LDLFITL SMG G+++LL R L+ F RL++VA GER+LE N ISF +TLD LVR + DD A ++ S LG+MLF RCVSGTRVV RG + + G++F G+G+S YPH YLTAACAIGL+ +E D+F RLD+T+ Sbjct: 340 YAGRASASPMLDLFITLCSMGLRGYQQLLTSRRILLPTFTERLKEVANKYGERVLECRTNCISFGVTLDGLVRPPRQDEDDV---------AYRTSVSRDVSSLGAMLFQRCVSGTRVVPRGTVQRMGGMEFCGFGSSHDAYPHAYLTAACAIGLTASEGDDFFTRLDQTL 501
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: A0A7S2KZY2_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZY2_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.110e-42 Identity = 82/162 (50.62%), Postives = 105/162 (64.81%), Query Frame = 1 Query: 13 ASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRR 498 A+++P +DLFITLLSMG G+++LLADR L F+ + R VA GER LE N+ISF ITLD L + K ++ + + G L S GSMLFTRCVSGTRVV +GQ KS+ G +F G+G+S NY H YLTAACAIG++ E+DEF R Sbjct: 1 ANSSPIMDLFITLLSMGLSGYKQLLADRSRLTIQFQNKFRDVATKYGERPLECPRNSISFGITLDNLGKLDKLSEEETSAEYAKRAG-------LEISYFGSMLFTRCVSGTRVVPKGQVKSIGGHEFVGFGSSTENYEHAYLTAACAIGVTNDEVDEFFLR 155
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Match: K0TG20_THAOC (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG20_THAOC) HSP 1 Score: 152 bits (385), Expect = 5.130e-40 Identity = 83/172 (48.26%), Postives = 114/172 (66.28%), Query Frame = 1 Query: 1 YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNGERLLESGGNTISFAITLDTLVREQKAGADDKRSAEGHQDGARPAAIPLSASLLGSMLFTRCVSGTRVVARGQRKSVAGVDFEGYGASVGNYPHDYLTAACAIGLSTAELDEFVRRLDKTIR 516 Y GRASA+P +DLFITLLSMG EG++++L +R L F+ +L ++AE GER L+ NTISF +TLD LV + D A Q+ + GSMLFTRCVSGTRVVA+ + K+++G F G+G+S +Y H Y+TAACA+GL AE++EF RLDK+++ Sbjct: 360 YPGRASASPVIDLFITLLSMGLEGYKKVLEERRRLTGLFQSQLERIAEKFGERTLKCPRNTISFGMTLDKLVCVESEQNSDAGVALKEQNK--------QITKFGSMLFTRCVSGTRVVAKNETKTISGHTFVGFGSSHDSYSHAYMTAACAVGLGEAEMNEFFARLDKSLK 523 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig95.20833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig95.20833.1 >prot_F-serratus_M_contig95.20833.1 ID=prot_F-serratus_M_contig95.20833.1|Name=mRNA_F-serratus_M_contig95.20833.1|organism=Fucus serratus male|type=polypeptide|length=205bp YAGRASAAPCLDLFITLLSMGEEGWRRLLADREALVEPFRRRLRQVAEDNback to top mRNA from alignment at F-serratus_M_contig95:242211..243820+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig95.20833.1 ID=mRNA_F-serratus_M_contig95.20833.1|Name=mRNA_F-serratus_M_contig95.20833.1|organism=Fucus serratus male|type=mRNA|length=1610bp|location=Sequence derived from alignment at F-serratus_M_contig95:242211..243820+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig95:242211..243820+ >mRNA_F-serratus_M_contig95.20833.1 ID=mRNA_F-serratus_M_contig95.20833.1|Name=mRNA_F-serratus_M_contig95.20833.1|organism=Fucus serratus male|type=CDS|length=1230bp|location=Sequence derived from alignment at F-serratus_M_contig95:242211..243820+ (Fucus serratus male)back to top |