mRNA_F-serratus_M_contig943.20800.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: D8LD02_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD02_ECTSI) HSP 1 Score: 493 bits (1269), Expect = 2.370e-173 Identity = 231/284 (81.34%), Postives = 255/284 (89.79%), Query Frame = 1 Query: 1 QQIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQLP 852 +Q +HF+E+GYL+LPDWWS+Q EC EIRERVQ++V MDLDEART FSTDESKHAED YFLGSGDKIRFFWE GAFD KGEFV+DRLK INKIGHALHDLDPV+K+YSYE+RVGQV+RDLGL PLAVQSMYIFKQP+IGGEV PHQDGAFLYTEPQSV+GYWWALEDCTLSNGCLWAVP SH RVV RRFKRSP GEGCEF+PPEA+AFD++GAVPLEVKAGTL+LLHHS+VHYSEAN S SRHAYSIHVVEGK+G+RYP DNWLQRP PFQ+LP Sbjct: 19 EQREHFNEKGYLVLPDWWSKQ------ECEEIRERVQQVVQDMDLDEARTIFSTDESKHAEDAYFLGSGDKIRFFWEAGAFDDKGEFVHDRLKSINKIGHALHDLDPVMKKYSYEKRVGQVSRDLGLSTPLAVQSMYIFKQPRIGGEVTPHQDGAFLYTEPQSVVGYWWALEDCTLSNGCLWAVPGSHRRVVKRRFKRSPTGEGCEFEPPEAEAFDVEGAVPLEVKAGTLILLHHSVVHYSEANTSEKSRHAYSIHVVEGKEGFRYPEDNWLQRPGETPFQELP 296
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A835YTQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTQ3_9STRA) HSP 1 Score: 355 bits (911), Expect = 5.360e-119 Identity = 163/276 (59.06%), Postives = 210/276 (76.09%), Query Frame = 1 Query: 1 QQIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGE-GCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRP 825 +Q+ +H++GYL+LP +WS+Q A ++ + E++ KMDLDE+RT F+T E A D+YFLGSGDK+RFFWE +FD K F +R +CINKIGHALHDLDP K+ SY++R+G++ ++LG+ PLA QSMYIFKQP+IGG+V+PHQDGAFLYT+PQSV+G+WW LE CTL NGCLWAVP SH V+RRF+R G GCEF+PPE +D VPLE AGTLV+LH++LVHYS N S SRHAY++HVV+GK G YP+DNWLQ+P Sbjct: 17 EQVAAYHQDGYLVLPGFWSQQQVAGA------KQAIGEVLAKMDLDESRTIFTTKEQNRAADEYFLGSGDKVRFFWEEDSFDGK-TFKQERTQCINKIGHALHDLDPTFKQLSYDERIGRICKELGMSTPLACQSMYIFKQPRIGGQVRPHQDGAFLYTQPQSVIGFWWGLERCTLENGCLWAVPGSHRAGVTRRFRRCREGAPGCEFEPPEPVEWDTSAGVPLECDAGTLVILHNALVHYSLDNKSDKSRHAYTLHVVDGKPGIEYPADNWLQKP 285
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: W7TZY3_9STRA (Phytanoyl-dioxygenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZY3_9STRA) HSP 1 Score: 337 bits (863), Expect = 1.630e-111 Identity = 166/283 (58.66%), Postives = 197/283 (69.61%), Query Frame = 1 Query: 10 KHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFD-AKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLG-LFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQLP 852 + F E+GYL+L +WS+ C +RER+ +V DL + FSTDE D YFL SGDKI +FWE GA D A G F R INK+GHALHDLDP+ ++ +Y ++GQ+AR +G L PL QSMYIFKQP+IGG+V HQDG FLYTEPQSV+G+WWALEDCT NGCLWAVP SH + VSRRF+R + +G EF PPEA +DL G +PLEVKAG LVLLHH+LVHYS N S +SRHAYSIHVVEG YP DNWLQR PFQ LP Sbjct: 31 RRFEEDGYLVLEGYWSKAT------CTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP 307
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A6V1UDU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UDU3_HETAK) HSP 1 Score: 327 bits (838), Expect = 2.010e-107 Identity = 163/275 (59.27%), Postives = 195/275 (70.91%), Query Frame = 1 Query: 1 QQIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRV-VSRRFKRSPNGEGCEFDPPEAQA-FDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQ 819 +Q++ F GYL++P +W ++ +R + I+ DL+E+RT FSTDE + YFLGSGDKIRFFWE AFD G F + + INKIGHALHDL+ V + +Y+ RVG++ARDLGL PLAVQSMYIFKQP+IGG+V HQDGAFLYT PQSVLG+WW LED +L+NGCLWAVP SH VSRRFKR G G FDPP A FDL GAVPLE+KAG+LVLLH LVHYS N S SRHAYS+H V+G G YP+DNWLQ Sbjct: 49 EQVESFQRNGYLVVPSFWDKKTVKL------LRSEIASIISSFDLEESRTIFSTDEQSRHSNDYFLGSGDKIRFFWEEDAFDDDGNFRQKKEQSINKIGHALHDLNSVFQNATYDTRVGEIARDLGLVKPLAVQSMYIFKQPRIGGKVGAHQDGAFLYTRPQSVLGFWWPLEDTSLANGCLWAVPGSHKTTPVSRRFKRDGKG-GTTFDPPGPPAEFDLTGAVPLELKAGSLVLLHAQLVHYSLENRSPRSRHAYSVHAVDGAPGVAYPADNWLQ 316
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A7S1CJ62_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJ62_9STRA) HSP 1 Score: 303 bits (776), Expect = 7.470e-98 Identity = 151/278 (54.32%), Postives = 182/278 (65.47%), Query Frame = 1 Query: 7 IKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPF 840 + F EEG+L++P++ R C ++ R +E+V D + FSTDE D YFL SGDKI FF+E GAFD G V ++ K INKIGHALHD D + + SY+ R+ + R L PL Q+MYIFKQP IGG V PHQDG FLYT+PQSV G+W+A+EDCT+ NGCLWAVPRSH V RRF R +G G FDPPE +GA LEV AGTLVLLH + VH+S AN S SRHAY+IHVVEG G YP+DNWLQRP PF Sbjct: 54 VAKFREEGFLVVPEFIERGT------CERLKRRAEELVAGFDASVV-SVFSTDEQTRTSDAYFLDSGDKISFFFEEGAFDEAGALVREKDKAINKIGHALHDRDDLFREVSYDPRLAAMCRALDYTLPLLTQTMYIFKQPGIGGVVGPHQDGTFLYTQPQSVTGFWFAMEDCTVDNGCLWAVPRSHMDGVPRRFMRDASGSGTAFDPPEPVTLPTEGAQCLEVPAGTLVLLHSANVHFSHANKSALSRHAYTIHVVEGAKGVTYPADNWLQRPPEDPF 324
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A5D6YG36_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG36_9STRA) HSP 1 Score: 286 bits (733), Expect = 7.690e-92 Identity = 152/293 (51.88%), Postives = 188/293 (64.16%), Query Frame = 1 Query: 4 QIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDE-SKHAEDKYFLGSGDKIRFFWETGAFDAK--GEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGC-------EFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQR-PQNAPFQQL 849 QI +H +G+L++P + +C +RER V D++E R+ F+T+E S+ D+YFL SGD+IR+F+E AFDA + INKIGH LH+LDP +R SY V + R LG P+AVQSMYIFKQP IGGEV HQDG+FLYTEPQSVLG+WWALEDCTL NGCL VP SH+ + +R +R+ E E P A+ FDL G+VPLE K G LVLLH S VH+S AN S +SRHAYSIHVVE DG YP DNWLQ P N PF+ + Sbjct: 18 QIAQYHRDGFLVIP------GALAPADCDRLRERAGVFVAACDVNEHRSIFTTNEQSRRMNDEYFLSSGDQIRYFFEEHAFDAADPAKLAVPLEVAINKIGHNLHNLDPAFERVSYAPGVAAILRSLGYRRPMAVQSMYIFKQPSIGGEVSAHQDGSFLYTEPQSVLGFWWALEDCTLENGCLHGVPGSHAEPIRQRLRRTTPAEQAVNGGVLTEMKPATAEPFDLSGSVPLETKKGDLVLLHSSFVHFSNANRSRNSRHAYSIHVVES-DGVHYPVDNWLQTTPGNPPFKVM 303
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A8J9RKN3_9CHLO (Phytanoyl-CoA dioxygenase domain-containing protein 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RKN3_9CHLO) HSP 1 Score: 285 bits (728), Expect = 5.490e-91 Identity = 146/285 (51.23%), Postives = 188/285 (65.96%), Query Frame = 1 Query: 1 QQIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPE--AQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQL 849 +Q+ FH +G+L++ D+ T E ++R+R QE+V D R+ FST D+YFL SG+ I FF+E AF G D+ INKIGHALHD DP+ +R+S Q+V Q+ + LGL PL VQSMYIFKQPKIGGEV+PHQD FLYT+P SV+G WWALED T +NGCLWA P SH++ V+RRF R+P G+ FD Q F+ D VPLEV +G+LVLLH + VH+S N S SRHAYS+HV+EG ++Y DNWLQR +N F+ L Sbjct: 34 EQVDRFHRDGFLVIEDF------ATTSEVQDLRQRAQELVENFDP-ATRSVFSTKSQATTTDQYFLESGNNISFFFEENAFQEDGNLRQDKALSINKIGHALHDADPIFRRFSRSQKVAQLVQSLGLKRPLPVQSMYIFKQPKIGGEVRPHQDSTFLYTDPPSVVGLWWALEDATRTNGCLWAAPGSHAKGVARRFLRTP-GDKVAFDKDVDYLQLFNEDEFVPLEVPSGSLVLLHGANVHFSYENQSGKSRHAYSMHVIEGAPSHKYLPDNWLQRTENFQFEPL 310
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: K3WS29_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS29_GLOUD) HSP 1 Score: 281 bits (720), Expect = 6.390e-90 Identity = 149/291 (51.20%), Postives = 188/291 (64.60%), Query Frame = 1 Query: 4 QIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDE-SKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLK-CINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGC-------EFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQL 849 ++ +H GYL++ + S + C +R R + +L+E R+ F+T+E S+ D+YFL SGD+IR+F+E AF+A G + L+ INKIGH LH+LDP K SY V + + LG PLAVQSMYIFKQP IGGEV HQDG+FLYTEPQSV+G WWALEDCTL NGCL VP SHS + +R +R+ + E E PP+A+ FD+ +VPL+ G LVLLH S VHYS ANHS SSRHAYSIHVVE K+ + YP DNWLQ N PF L Sbjct: 19 ELAFYHTNGYLVIRNALSPEI------CDALRARAAVHIANCNLNEHRSIFTTNEQSRRMNDEYFLSSGDQIRYFFEEHAFEADGTTLKVPLEVAINKIGHNLHNLDPAFKEVSYAPEVKGILKSLGYQRPLAVQSMYIFKQPSIGGEVSAHQDGSFLYTEPQSVVGLWWALEDCTLENGCLHGVPGSHSEPIRQRLRRTTSEEQAQNGGMLTEMKPPKAEPFDVSQSVPLKTNKGDLVLLHSSFVHYSNANHSKSSRHAYSIHVVESKNVH-YPEDNWLQTTGNVPFTAL 302
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A7S3QW42_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QW42_DUNTE) HSP 1 Score: 276 bits (707), Expect = 3.150e-88 Identity = 140/285 (49.12%), Postives = 185/285 (64.91%), Query Frame = 1 Query: 1 QQIKHFHEEGYLLLPDWWSRQASYTAIECGEIRERVQEIVCKMDLDEARTTFSTDESKHA-EDKYFLGSGDKIRFFWETGAFD-AKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQL 849 +Q++ F E+G+L+LP W SR+ ECG+++ R+ +++ + D + R+ F+T + A + YFL S I FF E AFD A G+ + +NK+GHALHDLDP + +S +RV V + L PL VQSMYIFKQP+IGGEV PHQD FLYTEP + +G WWALEDCT NGCLWA P H + +SRRF + FD P+ + +DL VPLE AG+LVLLH VHYS N S +SRH+YS+HVVEG +YP+DNWLQRPQ PF+ + Sbjct: 6 EQVQKFREDGFLVLPSWSSRE------ECGQLKARMDQLLQEFDPEAVRSIFTTKGDQTAITNDYFLKSSSGISFFLEEKAFDEATGKLKQAKELSVNKVGHALHDLDPTFRAFSRNERVASVLKSLDYKVPLPVQSMYIFKQPRIGGEVVPHQDSTFLYTEPMTTVGLWWALEDCTKENGCLWAQPGIHKQGLSRRFLVREEDKTSTFDKPKVE-YDLGNFVPLECPAGSLVLLHGENVHYSAENTSDASRHSYSMHVVEGASTCKYPADNWLQRPQEMPFEPM 283
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Match: A0A538DKG4_9ACTN (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DKG4_9ACTN) HSP 1 Score: 275 bits (702), Expect = 1.570e-87 Identity = 138/279 (49.46%), Postives = 179/279 (64.16%), Query Frame = 1 Query: 16 FHEEGYLLLPDWWSRQASYTAIE-CGEIRERVQEIVCKMDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLKCINKIGHALHDLDPVLKRYSYEQRVGQVARDLGLFNPLAVQSMYIFKQPKIGGEVKPHQDGAFLYTEPQSVLGYWWALEDCTLSNGCLWAVPRSHSRVVSRRFKRSPNGEGCEFDPPEAQAFDLDGAVPLEVKAGTLVLLHHSLVHYSEANHSTSSRHAYSIHVVEGKDGYRYPSDNWLQRPQNAPFQQL 849 F +GYL+LP ++ I+ C +R+R E+V D DE RT FS + HA D YFL SGDK+RFF+E AFDA G + +NK+GHA+HDLDP R+S+ + VARDLG NPL +QSMYIFKQP+IGGEV PH D FL+TEPQ+V+G+W+ALED TL NGC+W VP SH + RF+R +G G D + + DG +PLE AGT+++LH SL H S N S SRHAY++H+++G RY DNWLQR P + L Sbjct: 13 FERDGYLVLP-------AFVGIDSCTRLRQRAHELVDAFDPDEHRTVFSPTDQGHARDDYFLSSGDKVRFFFEEDAFDAAGRLRQAKELSLNKLGHAMHDLDPEFARFSHTPELDGVARDLGFVNPLVLQSMYIFKQPQIGGEVHPHIDHTFLWTEPQTVIGFWFALEDATLENGCMWTVPGSHRLPIRSRFRRDGHG-GTTMDVYDPTPYPRDGEIPLEATAGTMIVLHGSLPHRSGPNRSDKSRHAYTLHIIDGTA--RYLDDNWLQRDPALPLRGL 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig943.20800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig943.20800.1 >prot_F-serratus_M_contig943.20800.1 ID=prot_F-serratus_M_contig943.20800.1|Name=mRNA_F-serratus_M_contig943.20800.1|organism=Fucus serratus male|type=polypeptide|length=243bp MDLDEARTTFSTDESKHAEDKYFLGSGDKIRFFWETGAFDAKGEFVNDRLback to top mRNA from alignment at F-serratus_M_contig943:301033..305025- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig943.20800.1 ID=mRNA_F-serratus_M_contig943.20800.1|Name=mRNA_F-serratus_M_contig943.20800.1|organism=Fucus serratus male|type=mRNA|length=3993bp|location=Sequence derived from alignment at F-serratus_M_contig943:301033..305025- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig943:301033..305025- >mRNA_F-serratus_M_contig943.20800.1 ID=mRNA_F-serratus_M_contig943.20800.1|Name=mRNA_F-serratus_M_contig943.20800.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig943:301033..305025- (Fucus serratus male)back to top |