mRNA_F-serratus_M_contig929.20674.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A) HSP 1 Score: 83.6 bits (205), Expect = 4.660e-18 Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLR 321
+P TL EA SP+ W+ A + E+ + W++VP P+G+ V+ K +FKRK+ KDG++E+Y+ R VA+G Q++GI Y E+ SP S+R
Sbjct: 30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIR 125
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 85.1 bits (209), Expect = 6.860e-17 Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP +L EAQASPEWP W++A K+E ++ WE+ PK + +G K +F+RK K+G++ KY+ R VAQG QI G+ + E+ +P S+R + A+A V
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVV 1009
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 83.2 bits (204), Expect = 3.230e-16 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAA 342
EP T+ EA+ P+WP+W+ A K E+ W + P G+ +G+K +FK K++ DG ++KY+ R VAQG Q G+ YDE+ +P A+LR++ A+AA
Sbjct: 829 EPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAA 931
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: UPI001F0214A0 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F0214A0) HSP 1 Score: 82.0 bits (201), Expect = 8.210e-16 Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP T +EA +S E W+ A SE+ L WE+V P G LG+K IFKRK++ DG IEKY+ R V +G RQ +G+ Y ++ SP S+R++ A+AAV
Sbjct: 785 EPRTFNEAMSSSEAQFWKEAINSEIESILNNHTWELVDLPPGNKPLGSKWIFKRKMKADGTIEKYKARLVVKGFRQREGLDYFDTYSPVTRITSIRVLVALAAV 888
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY) HSP 1 Score: 80.9 bits (198), Expect = 2.030e-15 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAA 342
+P +L EAQASP+WP W+RA + EM +++V P G V+G+K +F RK +G + + + R VAQG QI GI ++E+ +P +SLR++ A+AA
Sbjct: 321 DPLSLREAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAA 423
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A2G2XPK2_CAPBA (DNA-directed RNA polymerase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2XPK2_CAPBA) HSP 1 Score: 79.7 bits (195), Expect = 5.220e-15 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP T EA +S + W+ A SE++ L+ WE+V P G LG+K IFKRKI+ DG I+KY+ R + +G Q +G+ Y ++ SP S+RM+ A+AAV
Sbjct: 341 EPRTFKEAMSSSDSSFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKIKTDGTIDKYKARLIVKGFNQKEGLDYFDTYSPVTRITSIRMLIALAAV 444
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A2G2X9H7_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X9H7_CAPBA) HSP 1 Score: 79.7 bits (195), Expect = 5.280e-15 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP T EA +S + W+ A SE++ L+ WE+V P G LG+K IFKRK++ DG I+KY+ R V +G Q +GI Y ++ SP S+RM+ A+AAV
Sbjct: 838 EPRTFKEAMSSSDSSFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKMKTDGTIDKYKARLVVKGFNQKEGIDYFDTYSPVTRITSIRMLIALAAV 941
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 75.9 bits (185), Expect = 9.450e-15 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 10 MAVNHLPPEPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAA 342
+AVN L +P T +A SP +W++A E N + W +V P+GKTV+G++ +F+ K++ DG +E+ + R VA+G QI G HY+E+ + +S+R V A+AA
Sbjct: 9 LAVNQLN-DPMTPKQALESPYAEDWKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAA 118
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A2G2XFF4_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2XFF4_CAPBA) HSP 1 Score: 79.0 bits (193), Expect = 9.660e-15 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP T EA +S + W+ A SE++ L+ WE+V P G LG+K IFKRK++ DG I+KY+ R V +G Q +G+ Y ++ SP S+RM+ A+AAV
Sbjct: 782 EPRTFKEAMSSSDSSFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKMKTDGTIDKYKARLVVKGFNQKEGLDYFDTYSPVTRITSIRMLIALAAV 885
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA) HSP 1 Score: 79.0 bits (193), Expect = 9.890e-15 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 EPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHPKGKTVLGTKAIFKRKIRKDGRIEKYECRFVAQGLRQIKGIHYDESSSPTPSQASLRMVPAIAAV 345
EP T EA +S + W+ A SE++ L+ WE+V P G LG+K IFKRK++ DG I+KY+ R V +G Q +G+ Y ++ SP S+RM+ A+AAV
Sbjct: 539 EPRTFKEAMSSSDSSFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKMKTDGSIDKYKARLVVKGFNQKEGLDYFDTYSPVTRITSIRMLIALAAV 642 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig929.20674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig929.20674.1 >prot_F-serratus_M_contig929.20674.1 ID=prot_F-serratus_M_contig929.20674.1|Name=mRNA_F-serratus_M_contig929.20674.1|organism=Fucus serratus male|type=polypeptide|length=116bp MRAMAVNHLPPEPTTLHEAQASPEWPNWQRARKSEMNRQLTRQLWEVVPHback to top mRNA from alignment at F-serratus_M_contig929:15262..15609+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig929.20674.1 ID=mRNA_F-serratus_M_contig929.20674.1|Name=mRNA_F-serratus_M_contig929.20674.1|organism=Fucus serratus male|type=mRNA|length=348bp|location=Sequence derived from alignment at F-serratus_M_contig929:15262..15609+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig929:15262..15609+ >mRNA_F-serratus_M_contig929.20674.1 ID=mRNA_F-serratus_M_contig929.20674.1|Name=mRNA_F-serratus_M_contig929.20674.1|organism=Fucus serratus male|type=CDS|length=696bp|location=Sequence derived from alignment at F-serratus_M_contig929:15262..15609+ (Fucus serratus male)back to top |