mRNA_F-serratus_M_contig920.20617.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A6H5JP28_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP28_9PHAE) HSP 1 Score: 304 bits (779), Expect = 1.670e-99 Identity = 165/247 (66.80%), Postives = 178/247 (72.06%), Query Frame = 1
Query: 1 MVDYSRFDHIGSDSEDD---VDEGQGGIQVPSATAPRMQASTTSMRSDNEGSRQGDAAESSSARSASEDPVGGASSVTSDSFLRPTMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
MVDYSRFDHIGSDS+DD V + P GG+ + S +P M T SKKGKEGRIKFEHEG R VYEWEQSLEEVNLYIE PPG+KAD+I+CTITPRHI LG+KGNPPFIDEDTGGPV+VEESYWMMDG ELNVNLQKMKKA+TW AALQGR+ VDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDAR+FMGGVKY
Sbjct: 1 MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSRA----SVPQPKMMTASKKGKEGRIKFEHEG-RTVYEWEQSLEEVNLYIETPPGVKADRIECTITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARSFMGGVKY 242
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A835YMR3_9STRA (Nuclear movement domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR3_9STRA) HSP 1 Score: 224 bits (571), Expect = 3.680e-68 Identity = 105/157 (66.88%), Postives = 122/157 (77.71%), Query Frame = 1
Query: 262 SKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
S KG+EGRI F+H+G R +YEWEQSLEEVN+Y++PPPG+ + I C+I H+ +GIKGNPPFIDEDT GPV V ESYWMM+G ELN+NLQK K TW AL G A DP+T E MQKK+MLERFQ ENPGFDFS AEF+G VPD FMGGVKY
Sbjct: 85 STKGREGRISFQHDG-REIYEWEQSLEEVNIYVKPPPGVASSAIQCSIGHTHLSVGIKGNPPFIDEDTWGPVKVSESYWMMEGGELNLNLQKAVKGSTWGGALAGSGQAADPLTREEMQKKLMLERFQEENPGFDFSQAEFSGAVPDPTKFMGGVKY 240
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: F0XX75_AURAN (CS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX75_AURAN) HSP 1 Score: 216 bits (550), Expect = 5.220e-66 Identity = 100/165 (60.61%), Postives = 126/165 (76.36%), Query Frame = 1
Query: 238 LRPTMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
+R + T K ++GR +F+HEG R +YEW+QSLE+VN+YI PPPG+ D IDCTI+P H+RLG++GNPPF+DE TGGPV+V+ES+W M+ EL V KM+K ETW AL R VDP T + +Q+++MLERFQ ENPGFDF AEFNGQVPD R FMGGVKY
Sbjct: 7 VRSVGSLTPKGSEKGRYQFKHEG-RVIYEWDQSLEDVNIYITPPPGVVPDMIDCTISPNHLRLGLRGNPPFLDEATGGPVVVKESHWYMNDGELTVLFAKMRKGETWDGALATR-GKVDPFTRQEIQREMMLERFQEENPGFDFRSAEFNGQVPDPRAFMGGVKY 169
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A8J2WTL1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTL1_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.260e-61 Identity = 113/246 (45.93%), Postives = 155/246 (63.01%), Query Frame = 1
Query: 1 MVDYSRFDHIGSDSEDDVDEGQGGIQV--PSATAPRMQASTTSMRSDNEGSRQGDAAESSSARSASEDPVGGASSVTSDSFLRPTMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
+ DYS+FD++ DS+DD Q P Q + +M ++ +G E++ D GG SV S T K + GR +F+HEG R +YEW+QSLE+VN+Y++PPPG+ D IDC +TP H+RLG++GNPPF+DE TGGP++ +ES++ M E+ V + KM+K ETW AL GR VDP T + +Q+++M+ERFQ E+PGFDF AEFNGQVPD R FMGGVKY
Sbjct: 4 LADYSKFDNL-DDSDDDAPAPAPPQQKLDPQGIPEGAQYTKPTMTNEVKGGNVARTREAAGPDGHVMDAKGGVRSVGS---------LTPKGSEVGRYQFKHEG-RLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGR-GQVDPFTRQEIQRELMIERFQEEHPGFDFRSAEFNGQVPDPRAFMGGVKY 237
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A7S4EBP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBP3_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.590e-61 Identity = 113/246 (45.93%), Postives = 155/246 (63.01%), Query Frame = 1
Query: 1 MVDYSRFDHIGSDSEDDVDEGQGGIQV--PSATAPRMQASTTSMRSDNEGSRQGDAAESSSARSASEDPVGGASSVTSDSFLRPTMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
+ DYS+FD++ DS+DD Q P Q + +M ++ +G E++ D GG SV S T K + GR +F+HEG R +YEW+QSLE+VN+Y++PPPG+ D IDC +TP H+RLG++GNPPF+DE TGGP++ +ES++ M E+ V + KM+K ETW AL GR VDP T + +Q+++M+ERFQ E+PGFDF AEFNGQVPD R FMGGVKY
Sbjct: 60 LADYSKFDNL-DDSDDDAPAPAPPQQKLDPQGIPEGAQYTKPTMTNEVKGGNVARTREAAGPDGHVMDAKGGVRSVGS---------LTPKGSEVGRYQFKHEG-RLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGR-GQVDPFTRQEIQRELMIERFQEEHPGFDFRSAEFNGQVPDPRAFMGGVKY 293
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A067CAW0_SAPPC (CS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAW0_SAPPC) HSP 1 Score: 197 bits (502), Expect = 5.860e-59 Identity = 92/152 (60.53%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 280 GRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPP-FIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
GR F+H+G + +YEWEQSLEEVN++I+PPPG+ A + CTI+P H+ LGIKGN ++D + V+V ESYWM+DG ELN+NLQKMKK TW A G +DP+T + +QKK++LERFQ ENPGFDFS AEFNG PDARTFMGGV+Y
Sbjct: 9 GRRAFKHQG-QVIYEWEQSLEEVNIFIKPPPGVTASHLLCTISPSHVMLGIKGNAERYLDHELTSQVVVAESYWMLDGGELNINLQKMKKGLTWDAVFVGH-GELDPLTKDEVQKKLLLERFQQENPGFDFSNAEFNGSAPDARTFMGGVRY 158
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A024TMB2_9STRA (CS domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TMB2_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.310e-57 Identity = 92/152 (60.53%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 280 GRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPP-FIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
GR F H+G + +YEWEQSLEEVNL+I PPPG+ A ++CTITP + LG+KG+ F+D + V+ +ESYWM+DG ELN+NLQKMKK TW G +DP+T +QKK+MLERFQ ENPGFDFS AEFNG PDARTFMGGVKY
Sbjct: 9 GRRSFTHQG-QLIYEWEQSLEEVNLFIRPPPGITAAHLNCTITPTRLTLGLKGSADRFLDHEFSSQVVADESYWMLDGGELNINLQKMKKGLTWDCVFVGH-GELDPLTKGEVQKKLMLERFQQENPGFDFSNAEFNGAAPDARTFMGGVKY 158
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A7R9UC51_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC51_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.090e-57 Identity = 109/244 (44.67%), Postives = 144/244 (59.02%), Query Frame = 1
Query: 4 VDYSRFDHIGSDSEDDVDEGQGGIQVPSATAPRMQASTTSMRSDNEGSRQGDAAESSSARSASEDPVGGASSVTSDSFLRPTMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAA-VDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
VDYS++D++ SDSED+ EG Q P+A AP VG L P +G +GRIKFE +G R +YEWEQ+L++V++Y+ PP G++A I C I PR ++LG+ GNPPF+DE+TGG V +ESYWMM EL + LQK K ETW AAL+G+ +D T + +QKK+MLERFQ E+PGFDFS AEFNG PD R FMGG+++
Sbjct: 1 VDYSKWDNLPSDSEDEA-EGAADAQAPAAAAPVR--------------------------------VG---------RLAP-------RGTDGRIKFEFDG-RTIYEWEQTLDDVSIYVVPPEGVQAKHISCEIQPRRLQLGLAGNPPFLDEETGGLVKADESYWMMADGELVITLQKGFKGETWDAALKGQGGEQIDVATKQEVQKKLMLERFQEEHPGFDFSNAEFNGAAPDPREFMGGMRH 194
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A7S2MQ41_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ41_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.510e-57 Identity = 94/162 (58.02%), Postives = 116/162 (71.60%), Query Frame = 1
Query: 247 TMTTTSKKGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIKGNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
+M T K + GR KFEH G + +YEW+Q L+EVNL+I PP G+ + I H+++GIKGNPPF+D TGG VIV ES+W E+NVNLQKM+K TW AAL G +DP++ + QK++MLERFQ ENPGFDFS AEFNGQVPDAR FMGGVKY
Sbjct: 85 SMKVTPKGSEAGRHKFEHNG-QTIYEWDQDLQEVNLWIRPPEGVTTAHLHVEIAHAHLKVGIKGNPPFLDHPTGGEVIVAESFWSFQDGEVNVNLQKMRKGLTWMAALAGH-GQLDPLSQQEDQKRLMLERFQEENPGFDFSNAEFNGQVPDARQFMGGVKY 244
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Match: A0A4D9DCE6_9STRA (CS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCE6_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.510e-56 Identity = 92/156 (58.97%), Postives = 118/156 (75.64%), Query Frame = 1
Query: 268 KGKEGRIKFEHEGSRAVYEWEQSLEEVNLYIEPPPGLKADQIDCTITPRHIRLGIK-GNPPFIDEDTGGPVIVEESYWMMDGAELNVNLQKMKKAETWRAALQGRDAAVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARTFMGGVKY 732
KGKEGR+KFE++G R +YEWEQ+LE+V++Y+ PP G+KA + CTI H+ LG+K PFIDE TGG V ES+W ++ EL+V LQK KK E W +AL GR ++DP+T E ++K++MLERFQ ENPGFDFS AEFNG VPD TF+GGVKY
Sbjct: 60 KGKEGRLKFEYDG-RTIYEWEQTLEDVSIYVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGR-GSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig920.20617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig920.20617.1 >prot_F-serratus_M_contig920.20617.1 ID=prot_F-serratus_M_contig920.20617.1|Name=mRNA_F-serratus_M_contig920.20617.1|organism=Fucus serratus male|type=polypeptide|length=246bp MVDYSRFDHIGSDSEDDVDEGQGGIQVPSATAPRMQASTTSMRSDNEGSRback to top mRNA from alignment at F-serratus_M_contig920:293753..297355- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig920.20617.1 ID=mRNA_F-serratus_M_contig920.20617.1|Name=mRNA_F-serratus_M_contig920.20617.1|organism=Fucus serratus male|type=mRNA|length=3603bp|location=Sequence derived from alignment at F-serratus_M_contig920:293753..297355- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig920:293753..297355- >mRNA_F-serratus_M_contig920.20617.1 ID=mRNA_F-serratus_M_contig920.20617.1|Name=mRNA_F-serratus_M_contig920.20617.1|organism=Fucus serratus male|type=CDS|length=1476bp|location=Sequence derived from alignment at F-serratus_M_contig920:293753..297355- (Fucus serratus male)back to top |