mRNA_F-serratus_M_contig92.20586.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: D7FL29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL29_ECTSI) HSP 1 Score: 256 bits (654), Expect = 7.830e-77 Identity = 146/221 (66.06%), Postives = 160/221 (72.40%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFD-------------GFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKV-VRHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
REPGVRDF KLC RV +FD G ++N Q D D D DG WFCSEAQALPVV ESL DV AGHLT KEA +HAAE+VAG+WN+LPS A E+ATT+RPE +Q DYLKIGRVTLPK Q K V SS FAPTSHALRLMETLAA+ QA EP+LLVGETGCGKTALVQRLAEGTGRDLVVQ+LSLQT+GADLL GF
Sbjct: 633 REPGVRDFLKLCTRVDTLGVFDRQNEDEVSMSNECGPQENDQ-----EEDDDHLNDEDG---WFCSEAQALPVVVESL-----DVFAGHLTTKEARAHAAEVVAGLWNVLPSRAVEIATTSRPEFVQAGDYLKIGRVTLPKLPQAKGGVTASSSFAPTSHALRLMETLAASAQACEPVLLVGETGCGKTALVQRLAEGTGRDLVVQNLSLQTDGADLLGGF 840
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A6H5JB27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB27_9PHAE) HSP 1 Score: 250 bits (638), Expect = 2.280e-74 Identity = 140/217 (64.52%), Postives = 161/217 (74.19%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDP---DVAEDSDGDAE------WFCSEAQALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVV-RHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
REPGVRDF KLCARV + +FD +D + + P DV ED + D WFCSEAQALPVV ESL DV AGHLT KEA +HAAE++AG+WN+L S+A E+ATT RPE ++ DYLKIGRVTLPK Q K SS FAPTSHALRLMETLAA+ QA EP+LLVGETGCGKTALVQRLAEGTGR+LVVQ+LSLQT+GADLL G+
Sbjct: 680 REPGVRDFLKLCARVDTTGVFDR-QDKAEVSMSNECGPQGNDVEEDGEDDYHLNDEDGWFCSEAQALPVVVESL-----DVFAGHLTTKEARAHAAEVIAGLWNVLASKAVEIATTTRPEFVEAQDYLKIGRVTLPKVPQAKCGGTASSSFAPTSHALRLMETLAASAQACEPVLLVGETGCGKTALVQRLAEGTGRNLVVQNLSLQTDGADLLGGY 890
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA) HSP 1 Score: 124 bits (310), Expect = 4.470e-29 Identity = 77/158 (48.73%), Postives = 93/158 (58.86%), Query Frame = 1
Query: 166 QALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVVRH------SSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
+AL +AE+L DV A L +AL AA +A +WN+ A LATT RP L ++ IGRVTL + FAPTS ALRLME +AA REP LLVGETGCGKT LVQ+LA G+ LVVQ+LSLQT+ ADLL G+
Sbjct: 239 RALAALAEAL-----DVFAACLASPDALRSAAGALAALWNVRAETALALATTRRPALSLSERHVAIGRVTLERREGXXXXXXXXXXXGGRLFAPTSQALRLMERVAACAAMREPALLVGETGCGKTTLVQQLARALGQTLVVQNLSLQTDSADLLGGY 391
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A7S3VEM6_9STRA (Midasin n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEM6_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.220e-24 Identity = 74/214 (34.58%), Postives = 110/214 (51.40%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAG----HLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTL---PKSTQMKVVRHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R VRD KL R+ F+ G T FC+E+Q + +AES D+ A RK+ +S I+A +W + + +P++ +Y+++GR T+ PKS + V+ S FA T+++LRLME+ ++ EP LLVGETGCGKT ++QRLA +G +LVVQ+LSLQT+ DLL G+
Sbjct: 659 RHSSVRDLVKLLYRISCIVHFE------PGAT------------------FCTESQRILCMAESF-----DIFASWCPCRFLRKDFVSL---ILAPIWGVTATAGIRYIEDRQPQIKVTGEYIEVGRSTIRRPPKSNESVVIAPRSNFADTNYSLRLMESAGVSIAQNEPTLLVGETGCGKTTIIQRLASLSGHELVVQNLSLQTDSTDLLGGY 840
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A1E7FX93_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX93_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.340e-23 Identity = 72/209 (34.45%), Postives = 102/209 (48.80%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAG-MWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVVRH-SSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R P VRD FKL +R+ F+ + +EAQ +AES VD+ ++ +VA +W I A +P ++ G ++ +IGR + + S+ FA TSHALRLME++A V+ EPILLVGETGCGKT ++Q+LA R L+VQ+LSLQT+ DLL G+
Sbjct: 236 RIPSVRDLFKLLSRISNGMCFEK------------------------NTLYITEAQRTLCMAES-----VDIFMASCPNQQVREEFIGLVAAPVWGITGDLAFAYIMVRKPTVLMGTNFFEIGRAKFDITKSIGYSEEPSTTFAQTSHALRLMESIAVCVRENEPILLVGETGCGKTTVIQQLAASCERTLIVQNLSLQTDSTDLLGGY 415
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A2P6V0F8_9CHLO (Type A von Willebrand factor domain-containing isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0F8_9CHLO) HSP 1 Score: 105 bits (262), Expect = 1.230e-22 Identity = 77/222 (34.68%), Postives = 107/222 (48.20%), Query Frame = 1
Query: 1 REPGVRDFFKLC---ARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPV-VAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLP-------KSTQMKVV----RHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R +RD K C R+H+ L AL P G A + + A ++PV V E+ + D L R EA +A +W++ P + + ++P + G+ L +GR TLP ++ + S FAPT HALR ME +AAA EP+LLVGETG GKT LVQ++A+ G LVV +LS QT+ DLL GF
Sbjct: 588 RHFSIRDVLKWCRRMGRLHSVLL------------QRALKP-------GRATLYAASAASVPVAVREAAFTEAADCFCALLGRAEAAERLMAALAALWSVSPETVQQYSALHKPAVQAGSVDLSVGRATLPLVDAAAGRAALAAAAGGDGKSISRFAPTGHALRNMERVAAAASLSEPVLLVGETGTGKTTLVQQIAKQVGAKLVVLNLSQQTDSGDLLGGF 790
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A2V0PB93_9CHLO (VWFA domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PB93_9CHLO) HSP 1 Score: 105 bits (261), Expect = 1.680e-22 Identity = 72/209 (34.45%), Postives = 103/209 (49.28%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVVRHSSF--FAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R G+RD K C R+ A+ R + G ++ PD A A + +Q + E+ + D+ AG + A + +W + S A + +P L Q +++GR+ LP+S + S FA T HALR+ME AAA+ REP+LLVGETG GKT + LA TG LV +LS QT+ +DLL GF
Sbjct: 602 RRAGLRDLVKWCRRMAATHGGLVSRALRGAGGAQSVAPDRAPADLAAAAYVMDASQIDLALREAAFAEAADLFAGQVASPAAKLRVLRALCALWALPESAAQQYEELGKPHLSQLAGEVQVGRIHLPQSLSPQPPAPSGLGRFAHTGHALRVMERCAAALAQREPVLLVGETGTGKTTTLSHLAHLTGSKLVAFNLSQQTDSSDLLGGF 810
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A7S3DLW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DLW9_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.460e-22 Identity = 69/208 (33.17%), Postives = 109/208 (52.40%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAGHLTR-KEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVVRHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R P VRD FK+ +R+ S +F+ +Q G + +E Q +AE++ DV A K + A W++ A + + P + Q + ++ IGRV LP S Q +V S +A T++ +R+ME++ ++ EP+LLVGETG GKT+++Q+LA +G +LVVQ+LSLQT+ D+L GF
Sbjct: 31 RPPSVRDLFKVMSRIANSVVFE-----RQTG-------------------YATENQRTICLAETM-----DVFAAACPDVKSRRIFVRDFAAPAWSLTVDAAVQSLESRIPAIDQHDGFVHIGRVGLPTS-QDEVQIDSGTYACTAYTIRMMESIGVCIRENEPVLLVGETGGGKTSILQQLARISGHELVVQNLSLQTDSTDILGGF 208
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A8K1FNU7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNU7_PYTOL) HSP 1 Score: 103 bits (257), Expect = 5.740e-22 Identity = 72/210 (34.29%), Postives = 105/210 (50.00%), Query Frame = 1
Query: 1 REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWFCSEAQALPVVAESLISRHVDVLAGHLTRKEALSHAAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRV---TLPKSTQMKVVRHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
R+ +RD K C RV+A G + A D DV D +A + +E + L +V E+ DV + + AA + +W + + ++P + ++IGRV LP S + SS F T H LRL+E LAA V EP LLVGETGCGKT ++Q LA G+ LVVQ+L++Q++ +DL+ GF
Sbjct: 566 RDFSLRDLLKWCKRVYAFCY--------TGSGSNAADDDVVMADDQEA--YITEEERLRIVVEAC-----DVFCSGIRDVQTRLEAAIAIGAIWQVQEERIRYMIEQHKPSVNFHLHEVEIGRVHLPALPVSASEEGGSSSSSFVMTGHVLRLLEKLAAIVYTCEPALLVGETGCGKTTVIQHLAASMGQKLVVQNLNIQSDSSDLVGGF 760
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Match: A0A1V9YN45_9STRA (Midasin (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN45_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.440e-21 Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 256 AAEIVAGMWNILPSEAAELATTNRPELMQGNDYLKIGRVTLPKSTQMKVVRHSSFFAPTSHALRLMETLAAAVQAREPILLVGETGCGKTALVQRLAEGTGRDLVVQDLSLQTNGADLLRGF 621
AA +AG+W++ P +RP + + + +GR+ L Q H F T H+LRLME LAA V EP LLVGETGCGKT L+Q LA G+ LVVQ+L++Q++ ADLL G+
Sbjct: 568 AATSIAGLWDVQPEVVETQLRAHRPNFVPHHASVTVGRIQLQTLPQATSTGHQIPFVLTGHSLRLMEQLAATVATHEPTLLVGETGCGKTTLIQYLATSMGQTLVVQNLNVQSDSADLLGGY 689 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig92.20586.1 >prot_F-serratus_M_contig92.20586.1 ID=prot_F-serratus_M_contig92.20586.1|Name=mRNA_F-serratus_M_contig92.20586.1|organism=Fucus serratus male|type=polypeptide|length=207bp REPGVRDFFKLCARVHASALFDGFRDNQQGGTTFALDPDVAEDSDGDAEWback to top mRNA from alignment at F-serratus_M_contig92:206981..211697+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig92.20586.1 ID=mRNA_F-serratus_M_contig92.20586.1|Name=mRNA_F-serratus_M_contig92.20586.1|organism=Fucus serratus male|type=mRNA|length=4717bp|location=Sequence derived from alignment at F-serratus_M_contig92:206981..211697+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig92:206981..211697+ >mRNA_F-serratus_M_contig92.20586.1 ID=mRNA_F-serratus_M_contig92.20586.1|Name=mRNA_F-serratus_M_contig92.20586.1|organism=Fucus serratus male|type=CDS|length=1242bp|location=Sequence derived from alignment at F-serratus_M_contig92:206981..211697+ (Fucus serratus male)back to top |