mRNA_F-serratus_M_contig918.20577.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig918.20577.1
Unique NamemRNA_F-serratus_M_contig918.20577.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig918.20577.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.580e-76
Identity = 189/353 (53.54%), Postives = 216/353 (61.19%), Query Frame = 1 
Query:    1 SNLEQRLELEVLRLERLLDRERILELLRLTDPDSQDRPPAGSSE----------------------------------DEEVSEEAIAQLEDRVEKAEERVRTETSRLESAVAGRLGERAEREESVRXXXXXXXXXXXXLQNALRDKEQRLARTVVDYLELRHAVLRAQRVSSEARDEAAAVGMEQEGQIQKCAQDVAEYRRSTKEAVNKICEAVTGDLRRQIQLRVDKACMLREQLAEVEELYEARAARLEGLVEEWKGKYATLRRRFALETEGFRRDADEIGRRFERIRAGPPGGRRTVSSTM*GM-NLSLPRVYGR*PYSCHLPRGRKRRSFGAVIMPFGHIIYSERYLS 954
            SNLE  LEL VLRLERLLDRERILELLRLTDPD  +   A   E                                    EVSEE + QLE+RV +AEERVR E SR+ +AVA RL ERA R     XXXXXXXXXXX LQ ALR KE+RLA TVV YLELRHA+LRAQRV+SEAR++A       E +++KC    A   ++  E V   CE V  +L RQ+QLR D+ CMLREQ AE EELYEARA RLE L+EEWKGK+A LRRRF+LETEGFRRDAD IGRRFERIRAGPPGGR  +SS       L++ R +         PR        A    FG +    RY S
Sbjct:  161 SNLEHGLELGVLRLERLLDRERILELLRLTDPDRAETTRAAGMEAFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVSEEVVEQLEERVAEAEERVRVEASRVGAAVAVRLEERARRXXXXXXXXXXXXXXXXRLQTALRGKEERLANTVVSYLELRHAMLRAQRVASEAREDAKKGRAADEEEMRKCRSYTAYQVQAITERVKGTCEDVESELHRQVQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAF--------YPRAAAGSGGTAAAGAFGQLGGGHRYPS 505
[Close]
BLAST of mRNA_F-serratus_M_contig918.20577.1 vs. uniprot
Match: A0A6H5K077_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K077_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 5.080e-41
Identity = 95/173 (54.91%), Postives = 114/173 (65.90%), Query Frame = 1 
Query:  370 YLELRHAVLRAQRVSSEARDEAA--------------AVGMEQEG-------------QIQKCAQDVAEYRRSTKEAVNKICEAVTGDLRRQIQLRVDKACMLREQLAEVEELYEARAARLEGLVEEWKGKYATLRRRFALETEGFRRDADEIGRRFERIRAGPPGGRRTVSS 807
            + ELRHA+LRAQRV+SEAR++A               +  +  +G             Q++KC   +A   ++  E V   CE V  +L RQIQLR D+ CMLREQ AE EELYEARA RLE L+EEWKGK+A LRRRF+LETEGFRRDAD IGRRFERIRAGPPGGR  +SS
Sbjct:   43 FQELRHAMLRAQRVASEAREDAKKGRAADEEELKPLLSSCLRSDGALLPPFALHADTCQMRKCRSYMAYQVQAITERVKGTCEDVESELHRQIQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISS 215
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig918.20577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSK9_ECTSI3.580e-7653.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K077_9PHAE5.080e-4154.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig918contigF-serratus_M_contig918:295559..301840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1203
Cds size510
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig918.20577.1prot_F-serratus_M_contig918.20577.1Fucus serratus malepolypeptideF-serratus_M_contig918 298558..301453 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932660.134067-UTR-F-serratus_M_contig918:295558..2956231622932660.134067-UTR-F-serratus_M_contig918:295558..295623Fucus serratus maleUTRF-serratus_M_contig918 295559..295623 +
1690964409.2677505-UTR-F-serratus_M_contig918:295558..2956231690964409.2677505-UTR-F-serratus_M_contig918:295558..295623Fucus serratus maleUTRF-serratus_M_contig918 295559..295623 +
1622932660.1552687-UTR-F-serratus_M_contig918:295858..2959851622932660.1552687-UTR-F-serratus_M_contig918:295858..295985Fucus serratus maleUTRF-serratus_M_contig918 295859..295985 +
1690964409.279798-UTR-F-serratus_M_contig918:295858..2959851690964409.279798-UTR-F-serratus_M_contig918:295858..295985Fucus serratus maleUTRF-serratus_M_contig918 295859..295985 +
1622932660.172398-UTR-F-serratus_M_contig918:297939..2980321622932660.172398-UTR-F-serratus_M_contig918:297939..298032Fucus serratus maleUTRF-serratus_M_contig918 297940..298032 +
1690964409.2903373-UTR-F-serratus_M_contig918:297939..2980321690964409.2903373-UTR-F-serratus_M_contig918:297939..298032Fucus serratus maleUTRF-serratus_M_contig918 297940..298032 +
1622932660.198271-UTR-F-serratus_M_contig918:298536..2985571622932660.198271-UTR-F-serratus_M_contig918:298536..298557Fucus serratus maleUTRF-serratus_M_contig918 298537..298557 +
1690964409.300701-UTR-F-serratus_M_contig918:298536..2985571690964409.300701-UTR-F-serratus_M_contig918:298536..298557Fucus serratus maleUTRF-serratus_M_contig918 298537..298557 +
1622932660.3514864-UTR-F-serratus_M_contig918:301453..3018401622932660.3514864-UTR-F-serratus_M_contig918:301453..301840Fucus serratus maleUTRF-serratus_M_contig918 301454..301840 +
1690964409.366998-UTR-F-serratus_M_contig918:301453..3018401690964409.366998-UTR-F-serratus_M_contig918:301453..301840Fucus serratus maleUTRF-serratus_M_contig918 301454..301840 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932660.2132857-CDS-F-serratus_M_contig918:298557..2986261622932660.2132857-CDS-F-serratus_M_contig918:298557..298626Fucus serratus maleCDSF-serratus_M_contig918 298558..298626 +
1690964409.3124793-CDS-F-serratus_M_contig918:298557..2986261690964409.3124793-CDS-F-serratus_M_contig918:298557..298626Fucus serratus maleCDSF-serratus_M_contig918 298558..298626 +
1622932660.2435212-CDS-F-serratus_M_contig918:299019..2991091622932660.2435212-CDS-F-serratus_M_contig918:299019..299109Fucus serratus maleCDSF-serratus_M_contig918 299020..299109 +
1690964409.3245738-CDS-F-serratus_M_contig918:299019..2991091690964409.3245738-CDS-F-serratus_M_contig918:299019..299109Fucus serratus maleCDSF-serratus_M_contig918 299020..299109 +
1622932660.2643263-CDS-F-serratus_M_contig918:299503..2996081622932660.2643263-CDS-F-serratus_M_contig918:299503..299608Fucus serratus maleCDSF-serratus_M_contig918 299504..299608 +
1690964409.3368428-CDS-F-serratus_M_contig918:299503..2996081690964409.3368428-CDS-F-serratus_M_contig918:299503..299608Fucus serratus maleCDSF-serratus_M_contig918 299504..299608 +
1622932660.3099763-CDS-F-serratus_M_contig918:300302..3004841622932660.3099763-CDS-F-serratus_M_contig918:300302..300484Fucus serratus maleCDSF-serratus_M_contig918 300303..300484 +
1690964409.3467684-CDS-F-serratus_M_contig918:300302..3004841690964409.3467684-CDS-F-serratus_M_contig918:300302..300484Fucus serratus maleCDSF-serratus_M_contig918 300303..300484 +
1622932660.3330636-CDS-F-serratus_M_contig918:301389..3014531622932660.3330636-CDS-F-serratus_M_contig918:301389..301453Fucus serratus maleCDSF-serratus_M_contig918 301390..301453 +
1690964409.3562458-CDS-F-serratus_M_contig918:301389..3014531690964409.3562458-CDS-F-serratus_M_contig918:301389..301453Fucus serratus maleCDSF-serratus_M_contig918 301390..301453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig918.20577.1

>prot_F-serratus_M_contig918.20577.1 ID=prot_F-serratus_M_contig918.20577.1|Name=mRNA_F-serratus_M_contig918.20577.1|organism=Fucus serratus male|type=polypeptide|length=170bp
MVRLQNALRDKEQRLARTVVDYLELRHAVLRAQRVSSEARDEAAAVGMEQ
EGQIQKCAQDVAEYRRSTKEAVNKICEAVTGDLRRQIQLRVDKACMLREQ
LAEVEELYEARAARLEGLVEEWKGKYATLRRRFALETEGFRRDADEIGRR
FERIRAGPPGGRRTVSSTM*
back to top

mRNA from alignment at F-serratus_M_contig918:295559..301840+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig918.20577.1 ID=mRNA_F-serratus_M_contig918.20577.1|Name=mRNA_F-serratus_M_contig918.20577.1|organism=Fucus serratus male|type=mRNA|length=6282bp|location=Sequence derived from alignment at F-serratus_M_contig918:295559..301840+ (Fucus serratus male)
AGCAACCTGGAACAGAGGCTCGAGCTCGAAGTTTTACGGCTGGAGAGGCT
TCTCGACCGCGAAAGGTAGCTAGCTACAAAGGCTACGGCACCGGTGCGGC
GCGGCGTCTGCTGTACAGTAATTGGATTATTTACATGCACCCTTGACGCA
ATGCAGCCGCAATCCGGCGCTACCATGCTTTTCATTCTATGCTTCTTTGT
TTGTTATTATAGTTAGTGTGCGTGTGCATTCTTGGTGTTGTTTTTCACGC
GTTGGGAAATGGAAATTCTCGCCTCGACATTTTCTGCTTCACGCCTCCAG
GATTCTGGAACTCCTGCGCCTGACGGATCCTGATTCGCAAGACCGTCCGC
CGGCGGGCAGCAGCGAGGACGAAGAGGTCTCGGAGGAAGCGATCGCTCAG
CTCGAGGACCGAGTGGAGAAAGCCGAGGTCCGTCCTCCGCTATTTTCTTG
TAGCTCTGCACGTTCCCTCGCCATGATGCTGCTGCGTGCACTCCACGATT
GTGAGAGAGCACAGATGCCCCCAAGAAGTTTCATCTGTCGTTTTTTCCTG
CGAGGGTGGGGTAGCAGACACGCGAGAGGACATATTTTGTAGGGGGGGGG
GGAGAGTTGTTGTCGTTGTTGTTGATTCACGCGTTCAGCGTATTGTCCTT
GCAACTGAAAAAACTACGGTGACACAACAAGTCAGCCATAGACCTATCAA
ATGTCAACCCCGCTTGTGGTCACAAAGAGGTACCAAGGTCAACACGGGTC
ACATCATGGTGACAACCCGCTACTCAGACCAACAGGGATCCAAATCACGA
CAAAAGGTTATTCGACTCTACAAGCAATGGCACCGACCAATATGGAAACG
GTTCATCAAACCTCCTTACTCCATATCGAGAGCAACCTCGATTGACTCGG
ATTGTTGCTCCAACCAGTTTTGATCAATAAGTCAAGTCCAAGTGTCTCAA
GGCCACACACTGTACAAAAATAAGGAAATTGAAATACCGAGGTCCATGGT
GGTGGAGGCCTTGAGCTGGTGAAGCCGGCGCGCGAGCCAGCCTCCAGCCG
TTTAAAGCCCTGTGTACCCCTGAAAAAGACCCACGAATCTTGCCCGTTCG
CCGCTCCTTGTGGCCCTCCTAGGAAGAAATAAGACCGTGGTCAGAGATCA
GCTTTTCCCTCAGAAACCTCCCGGTTCAAGCTTGTGGTTCTCGCGCACAG
GGGTTCAGCCCTCCCCTGACTCGCCGACGATCGAGCTGCCCTCCGCCTTC
GCCAAATCTGGTGCGTACCCACCGGATAGATCACTACTACCAGGCTCTCC
GCGACAGTGCTTCCTGCCTCTCGCGTGCCGCCACCCTCCCGAAGAGCATC
AAATTGGAGCTCGGAAGAGGCGCACACCTGGGAATACCATCCCCAACCAA
CCATACCGTCGCCGTGTCTCAACCGACGGGCTAAATCGCGATGGCAGCCA
GTTGGCTGCATCTCTTGAGGGCGAGCCCGGCCCTACACCCGCCGGAGAGA
CCCTCCCACACTCATACCCTGAAACCAGGTTTCGGGGGGAGAGGGCAAAC
TGACCGCGAGGAGAGTGTAGGAGAGGAATGAGACGGATATTTTCCCAAAA
TTAGAAGAAGGACGATATCCAAAGAGCCCATCATGGATATCTTACTTGTG
GGGCTATCGCTATCGCCATCACTACCCCAACACCCTCTACTCTCTGTATG
ATGGATTCGTACGGCCCAACTACGATTTATTCCTTCAGAGAATTCGCTGG
AGACGCTGTCTTTTTACAACGTTACGCCCTGCATTCAGGGGAAGATCCGC
CATACTCCCCCCCCCCCCATCCTCGACCCTTGAAACCTTGTCGAGACCTT
TCCAAAATCGCTGTCTTTCATGCGTCTGCCGGTATGTGCGGTATATATAC
TGTACGCCGAAAACATTGCGAAAAGTGTTATTTTTGTCCTCGGGTTTTGC
TATACTGTACTGTTAATACTATATATAGTACAAATATTATTAATACTTTC
ATATAGTATACCTGGTACATGATCTTCGGCGGTATATCACGGACGAAAAT
TGGAAATTCTCCGTCGCGTGTTCCGCATAAGCAGTATTGGTAGTACGAAT
ATAGGTACATGTACATCGCCCTAGATCAGAAACGACTCCATGCCCATGAA
CGATGGGGTCGCAGCAGAAAGCTAGCTCGCCCTGTCACAGAGACGCTAAT
CCCTTTCGCGTTCGCCCCTATTGACTACGGGTATTGACAGAGGTCGCGTC
GTGTCATGACGTTACGTCGTCGTGCTGCCTACCTGTCGCACCCGTCGGTA
AGCCCACGATCATCACGTGCCTCGACTCTGGTTCGTCTGCGCCCCTCCCC
ACCCCCCCCCTTTACAAAAAACGCACGCCAGGAGCGGGTGAGAACCGAGA
CTTCAAGGCTGGAATCAGCCGTCGCCGGGAGGTTGGGGGAAAGGGCGGAA
AGGGAAGAAAGCGTTCGCCGGGAGGTGAGCAAAAAGCTTAAAGTGCGAAA
AGAAATAAGCATATATACTAAGTACTGAATGGATTTGAAATAAATGAGTT
GAAAATAAGTTTATGAGTTAATTAAAAATATATTAAGGAAAGTACATCGA
ATAGTCTAAACAGAATGATATTTAAAAAATAATTACTTGTATAGACTACT
CGCAGTGCCATGTGCGGACGGGATTGGAGCAACGCAATCGTGTGGTTTTC
ATAGCGGGTTACTCGGCATTCTGTGCTATAGTCTAATAGGAATACGAAAA
GAAGAGAAAATACTCCTCTCAACTCTTGGGTTGCCGCCATACGCAAGCTG
TTCTCAGGTCTCAAGGTTTGGCTCCACGCGATCAACCACGCGGGGGTTGT
TTCTTTACGCACGCCCTCGGGCCCCGTCTTGCGGGATTGAGGATTGAGAT
CGCGCGTTCTTTTGAACGTTCCACACTGCTCTCCCACCCACCCCGTCTTT
CCGGCTGTACGACGGCGCGCTGTTGCAGGAAGCGACTAGGAGCGAAGAAA
TGGTACGGCTTCAAAATGCGCTCAGGGACAAGGAACAGAGGCTTGCGCGG
ACGGTCGTAGATTACTTGGTGGGTGCTCCGACGAAGCTCGAGGAGGGGGG
TCTCAATCCTCCCGGCGCGTTTCTGATTTTGCCCTTGCCTGGCCTTGCAT
CGCCGAGAGACGCGTAATCTTTTGACAGCTTCATACGTACCAGAGGTGTA
TTTTTTCATCTTGTTTTGCTTGAGACATTTTTTTTCCCCCCCATTCATTA
GTCTATAACGAGTAGTCTAATGCTGTTTTTTGTTCTTGTCTTTATATTTT
TTCTCGCCTTTTTCGCGTGTGCGTAATCTATATGTTTTCATCTTCCTCTA
TTTCTGGTGTGTTCAGGACCGGCGATTGCATACCTTCTACAGTACACTTA
GAGCAACTTGTTTGTTTTGTTTGTTTGTTTTTCTCTCCTTTTTTTTCTCA
TTTTCTTTCAGGAACTAAGGCACGCCGTCCTGCGGGCTCAGCGGGTATCT
TCCGAGGCTAGGGACGAAGCGGCCGCGGTCGGGATGGAGCAAGAGGGACA
GGTTAGAAAAAGAAAAATCCTACTGGTACGATTGCTTGCCGCCCATAGGT
GGACGGATGGCACAGAAATCTCAAGTGGTCTGGGCTCCCTGCTGTGGTCT
CTCCCCAGCTTCGAGAGAGACCCTCTGAGATGGCATGAAACCGTTGTGGA
ATCCTTATCCTTGGGAGTTGGAGCTAAGTCAAGTCAAACTTCCGCCAAAA
CATCTCGACGTGCATTCTGAATACACGCATCGTTTTGCCGAACGAAACCC
TTCTTCCAGCAGCCAAGAGATTTTCTCGACACGTCGTTGAACGTCCTTTT
AAAACAAAACGAACGATTTTTGGTGTGGCCTCGTTTTTTCCTTGAAACCC
CGCCCCCCCCCCCCCCCCTTCCTTTCCCCTCTTTTCATTTTCTAGATACA
AAAATGCGCGCAGGATGTGGCGGAGTATCGACGATCAACCAAGGAGGCAG
TAAACAAAATTTGCGAGGCGGTCACGGGAGATCTCCGTCGCCAGATTCAG
GTGCGAGATTCGTAAAGTTGCTGCAGCAGGCTCGCCCAGTAGCGCGGGCT
TGCACTCATTTTTTTTCCCTTCTACGGCATAGACTACTTAGTATTAAACT
CTTCTATTAAACAAACCTAACCACTTTTTTCAAGGAAAACTTTCGTGAGG
CCACTTTTTCCCGCGAACCACCAATCTACATTTTACCACATCTCAAAGTA
GAAAATTGACGAGGCCCGGTGGTGAAAATAAAAACCCAACTTCTCCCACT
TTTTTTTTTTTTTTTTTTCAATCTCACTTATAGCCGATGGACCTCATGAT
TACCATCCTGCCTGTGGTCATAAAGGATCTTCCCATCTCTCCCCGGGTCA
CGCCTTACATTTTTTTTATCGCAATGCAAGTTAAGCAATCTTACAACTCG
TCAACCAATGGTTGAATTTTACTTACTTGCGTTCCCACGCTTTCCGTTAC
GAACGAAAGAACACAAATCCTACTCTGGTAAGAATCAAACTCACGACTTC
CGCACTAACAGGTGTGCAGGTTACCTACTAGACCACTCGGGCGACGATCC
TGTATAATAATATAACATTGACCCCCGTTCCCCCGCCGAACCCCTCGACG
ATTGGATGTTGGTTGCCTGCGGGTGATGATTGGCCGTTGCTTTGTTTGTG
CGCGATGGTCGGTCGCCCCTTGCCTGCGCGCGGTGGCCCGCCAGCTGCGT
GTGGATAAGGCGTGCATGCTACGAGAGCAATTGGCAGAAGTGGAGGAGCT
GTATGAGGCGCGTGCAGCGCGGTTGGAGGGTTTGGTGGAGGAGTGGAAGG
GCAAGTACGCTACGCTCCGGCGCAGATTCGCGCTGGAGACCGAGGGATTT
CGTCGAGACGCCGACGAGATCGGGAGGTAATGCTTGTACTACTGTAGCGC
GTCTTCTCTAATCTTTTTTTTATCGACCCAAAGCGACAAAATTGCATGGT
GTTACTGCATATAAAAACGCCATTGCCATCCAATTGAAACCCCGATCAGG
CGTTAGAGCTGCTTTCGTTTAGCGAAGAAACCCGAAACATGCGAAATAAT
TGGAAATTGCCGATGAGTAGGGTTGAGGGTTGTCAATCTGACCGCGCCGG
TTGGCGAGCTTCGAGCCTTATCCTTGAAGTTTAATCCTCCGAGCCTAATT
CTCCTCGATACACCAACGCCGAATAATGCTCTAGTCTATAGGTCTATTAT
TCGTCCGCACTTTGCGTTTTTTTCGGTCGACGCGGCAAACCAAACCGTGA
TGGAGATGACGTGGAGGCGTTTTGGAGGTTTCTTGAAACCACCAAACGAT
CAACACAGGGAGTAACGAACCCGTTTTGGCGAACAAGCTCCTACTGCTGC
TGCTTCAAAACTCTGGAGACGCACCAACCCTTACCCTTGGTCGCGCCACG
CCTTATCCCCTCCGTTGCCTCATCCACGCCCTCATCCGTTAGGTTGGATG
ACACGACATGACATCCACAGACAGCGATTACAACATCACCCCCTCGAAAG
AAAAAAGAATGGAATACACACAAAAGAACAGAAAGAAAGACCAATCAAGA
TTATTATTTTTTTTTATTATATATTTCTCTTGTTTATTTCTCTTGTTTGG
AATTTTTTTCTCTCTTTTTTTTTTTCTTCTTTTCTCCCCTTCTTCCCCTC
CTTTTTTTCAACTTGAACGCTACCAAGCCTCAGAACAACCGAGTAATCAT
TACGCAGTTTGCAAGTGACAGGGGAGTCACCGACACTTTTGCCCACTGTG
TGCCCCTCCACGGTTCTTGACACCTTGTCAGGCGTTTCGAACGGATCCGA
GCCGGGCCGCCCGGAGGCCGACGGACGGTTTCCAGCACGATGTAGGGGAT
GAATCTCTCCTTGCCCCGGGTGTACGGTAGATGACCCTACTCTTGCCACT
TACCGCGCGGCAGGAAGAGGAGAAGCTTCGGTGCCGTAATAATGCCGTTC
GGGCACATCATCTATTCAGAGCGTTATTTATCGTTGGATCGGGAGTCCTG
GTCATCAGGAATCTAGGCTGTCGTTTTTTAGGTAGACTGGATGTTTTGTC
ACCAAACAAACGCATCTGGTGTAATGTGATGTGGTGTAATGTGATGTAAT
GATACGTGCGACCCCCGATGCGATGTGACATGTCGAGGAGGTGAGACATT
TGTGCTCTACCGCCGAGGTTAGGAAGTCTATCGAGCACCATCATCTCTGA
GCTGGGTGAAGTGGAAGCGTTTAAATACATAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig918:295559..301840+

>mRNA_F-serratus_M_contig918.20577.1 ID=mRNA_F-serratus_M_contig918.20577.1|Name=mRNA_F-serratus_M_contig918.20577.1|organism=Fucus serratus male|type=CDS|length=1020bp|location=Sequence derived from alignment at F-serratus_M_contig918:295559..301840+ (Fucus serratus male)
ATGGTACGGCTTCAAAATGCGCTCAGGGACAAGGAACAGAGGCTTGCGCG
GACGGTCGTAGATTACTTGATGGTACGGCTTCAAAATGCGCTCAGGGACA
AGGAACAGAGGCTTGCGCGGACGGTCGTAGATTACTTGGAACTAAGGCAC
GCCGTCCTGCGGGCTCAGCGGGTATCTTCCGAGGCTAGGGACGAAGCGGC
CGCGGTCGGGATGGAGCAAGAGGGACAGGAACTAAGGCACGCCGTCCTGC
GGGCTCAGCGGGTATCTTCCGAGGCTAGGGACGAAGCGGCCGCGGTCGGG
ATGGAGCAAGAGGGACAGATACAAAAATGCGCGCAGGATGTGGCGGAGTA
TCGACGATCAACCAAGGAGGCAGTAAACAAAATTTGCGAGGCGGTCACGG
GAGATCTCCGTCGCCAGATTCAGATACAAAAATGCGCGCAGGATGTGGCG
GAGTATCGACGATCAACCAAGGAGGCAGTAAACAAAATTTGCGAGGCGGT
CACGGGAGATCTCCGTCGCCAGATTCAGCTGCGTGTGGATAAGGCGTGCA
TGCTACGAGAGCAATTGGCAGAAGTGGAGGAGCTGTATGAGGCGCGTGCA
GCGCGGTTGGAGGGTTTGGTGGAGGAGTGGAAGGGCAAGTACGCTACGCT
CCGGCGCAGATTCGCGCTGGAGACCGAGGGATTTCGTCGAGACGCCGACG
AGATCGGGAGCTGCGTGTGGATAAGGCGTGCATGCTACGAGAGCAATTGG
CAGAAGTGGAGGAGCTGTATGAGGCGCGTGCAGCGCGGTTGGAGGGTTTG
GTGGAGGAGTGGAAGGGCAAGTACGCTACGCTCCGGCGCAGATTCGCGCT
GGAGACCGAGGGATTTCGTCGAGACGCCGACGAGATCGGGAGGCGTTTCG
AACGGATCCGAGCCGGGCCGCCCGGAGGCCGACGGACGGTTTCCAGCACG
ATGTAGGCGTTTCGAACGGATCCGAGCCGGGCCGCCCGGAGGCCGACGGA
CGGTTTCCAGCACGATGTAG
back to top