mRNA_F-serratus_M_contig916.20568.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig916.20568.1
Unique NamemRNA_F-serratus_M_contig916.20568.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A151QLV5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QLV5_CAJCA)

HSP 1 Score: 167 bits (422), Expect = 7.050e-46
Identity = 100/247 (40.49%), Postives = 140/247 (56.68%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAKIPAASGVPTLSKADE------PQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            + + GFE+  +D CV++KV       +V++VDDIL    DK  +      L + F +KDMG+A Y +G  I + R    L L Q  Y+  +++RF++K       +  V  + K D+      P+N  E+E MK  PY  AVG+LM+    TRPDIA AV V+ R+  NPG  H KA  K+ +YL  TKD+ + Y      L +  Y+DSDF  C+DTR+S SG V MLA GA+SW SR Q +TA S
Sbjct:   71 ISSFGFEENIMDQCVYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKD-----CSPSVAPIVKGDKLELSQCPKNNLEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKKVMRYLQGTKDFMLIYRRTD-SLEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATS 311          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A2P4YNZ8_9STRA (Retrovirus-related pol Polyprotein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YNZ8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.910e-45
Identity = 93/243 (38.27%), Postives = 143/243 (58.85%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRK------VVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAKIPAASGVPT--LSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            +K +GF+     PCV+ +       +V ++VDD+L  +++K  +    A + +KF++KD+G A + +G  I  + + + L + Q  Y E +I +F ++  AK    S  P+  L+KADEPQN ++K +MK  PYR  VG+LM+ A  TRPDIA AV  ++R+ ENP   H  A +K+ +YL  TKD  ITY G+  G  + AY+D+D+    D RRSVSG +LM+    + W S  Q+  A S
Sbjct:    5 LKTMGFKAGDAGPCVYTRGEGDSECIVCLYVDDMLIASREKDIIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTEPIINKFGLE-NAKPSLTSLDPSVHLTKADEPQNADDKAKMKSKPYRSLVGSLMYLACGTRPDIAVAVAKLSRYLENPDHRHWDAGIKVVRYLMKTKDAAITYDGR-MGTELTAYSDADWAGNRDDRRSVSGVMLMMCGAPVVWRSTFQKTVALS 245          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A5D3DI92_CUCME (Gag/pol protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DI92_CUCME)

HSP 1 Score: 165 bits (417), Expect = 4.610e-45
Identity = 95/243 (39.09%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAK--IPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            +K+ GF+Q   +PCV++K+       +V++VDDIL    D   +    A L  +F++KD+G+ +Y +G  I ++RK + L L Q  Y++ M+ R+ ++   K  +P   GV  LSK   P+ P+E E+M+   Y  AVG+LM+    TRPDI  AV +V+R+  NPG  H  AV  I +YL  T+D+ + YGG+   L +  YTDSDF    D+R+S SG+V  L +GA+ WHS  Q   A+S
Sbjct:   79 IKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLATQFQMKDLGETQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKDLLPFRHGV-HLSKEQCPKTPQEIEDMRRILYASAVGSLMYDMLYTRPDICYAVGIVSRYLFNPGLDHWTAVKIILKYLRRTRDYMLVYGGKD--LILTGYTDSDFQTDKDSRKSTSGSVFTLNRGAVVWHSIKQGCIADS 318          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY)

HSP 1 Score: 168 bits (426), Expect = 2.150e-44
Identity = 99/243 (40.74%), Postives = 143/243 (58.85%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAK--IPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            +K+ GF Q   +PCV++KV       ++++VDDIL    D   M      L   F +KD+G+A Y +G  + ++RK R L L Q  Y++ ++ RF ++   K   P   GV  LSK   P+  EE+E+M+  PY  AVG+LM+    TRPDI  AV +V+R+  NPGP H  AV  I +YL  TK + + +G +   L ++ YTDSDF + +D R+S+SG V  L KGAISW S  Q+ TA+S
Sbjct:  482 IKSFGFSQNIDEPCVYKKVSGRIITFLILYVDDILLIGNDVGAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGV-HLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADS 721          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR)

HSP 1 Score: 164 bits (414), Expect = 5.050e-44
Identity = 92/243 (37.86%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAK--IPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            ++   F + + +PCV++K+       +V++VDDIL    D  +M      L ++F +KD+G+A Y +G  I ++R  R L L Q +Y+++++KR++++K  +  +P   GV +LS+ + P+  EE+E M   PY  AVGA+M+T T TRPD+A A+ V +R+  NPG  H K V  I +YL  TKD  + YG     L ++ YTD+ F +  D  +S+SG V  L  GAISW S  Q   A+S
Sbjct:  260 IEKFNFVKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADS 499          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A438BZI3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BZI3_VITVI)

HSP 1 Score: 164 bits (416), Expect = 1.440e-43
Identity = 94/239 (39.33%), Postives = 137/239 (57.32%), Query Frame = 1
Query:   13 GFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            GF++  VD C++ +V       +V++VDDIL  + D   +      L   F +KD+G+A Y +G  I ++R    LKL Q  Y+E ++KRF++   K  K P   G    SKA  PQN +E+EEMK  PY   VG+LM+    TRPDIA  V ++ R+  NPG  H KA  K+ +YL  TKD  +TY      L +  + D+DF  C+D ++S +G + M+A GA+SW S  Q +TA+S
Sbjct:  293 GFKENTVDRCIYLRVSGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKFTKAPIVKG-DKFSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRTSL-LDVVGFCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASS 529          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A445FBE9_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FBE9_GLYSO)

HSP 1 Score: 166 bits (421), Expect = 1.530e-43
Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            + +  FE+  +D C+++KV       +V++VDDIL    DK  +      L + F +KDMG+A Y +G  I + R    L L Q  Y+  +++RF++K    +  P   G   L+ +  P+N  E+E MK  PY  AVG+LM+    TRPDIA AV V+ R+  NPG  H KA  K+ +YL  TKD+ + Y    C L +  Y+DSDF  C+D+RRS SG + MLA GA+SW S  Q +TA S
Sbjct: 1213 ISSFSFEENVMDHCIYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKG-DKLALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDC-LEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATS 1453          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A445FAJ6_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445FAJ6_GLYSO)

HSP 1 Score: 166 bits (421), Expect = 1.590e-43
Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 1
Query:    1 MKAIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            + +  FE+  +D C+++KV       +V++VDDIL    DK  +      L + F +KDMG+A Y +G  I + R    L L Q  Y+  +++RF++K    +  P   G   L+ +  P+N  E+E MK  PY  AVG+LM+    TRPDIA AV V+ R+  NPG  H KA  K+ +YL  TKD+ + Y    C L +  Y+DSDF  C+D+RRS SG + MLA GA+SW S  Q +TA S
Sbjct: 1987 ISSFSFEENVMDHCIYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKG-DKLALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDC-LEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATS 2227          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 162 bits (411), Expect = 1.900e-43
Identity = 93/241 (38.59%), Postives = 139/241 (57.68%), Query Frame = 1
Query:    7 AIGFEQAKVDPCVFRK------VVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAK--IPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            + GF++  VD C++ K      +++V++VDDIL  + D   +      L  KF +KD+G+A + +G  I ++R    L L Q  Y++ ++ RF +   A    P A G    S    P+N  EK++M+ FPY  AVG+LM+    TRPDIA  V ++ R+  NPG  H K   ++ +YL  TKD+ +TY  +   L + AY+DSDF  CLD+RRS SG + MLA GA+SW S  Q + A+S
Sbjct:  176 SFGFKENTVDQCIYLKFSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKG-DKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQTLVASS 414          
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Match: A0A445FSL3_GLYSO (Peroxidase n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FSL3_GLYSO)

HSP 1 Score: 166 bits (420), Expect = 1.910e-43
Identity = 97/241 (40.25%), Postives = 138/241 (57.26%), Query Frame = 1
Query:    7 AIGFEQAKVDPCVFRKV------VVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRVVARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS 705
            +  FE+  +D C+++KV       +V++VDDIL    DK  +      L + F +KDMG+A Y +G  I + R    L L Q  Y+  +++RFD+K    +  P   G   L+ +  P+N  E+E+MK  PY  AVG+LM+    TRPDI  AV V+ R+  NPG  H KA  K+ +YL  TKD+ + Y    C L +  Y+DSDF  C+D+RRS SG + MLA GA+SW S  Q +TA S
Sbjct:   60 SFSFEENVMDHCIYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFHIKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFDMKDCSPSVAPIVKG-DKLALSQCPKNDFEREKMKNIPYASAVGSLMYAQVCTRPDIVFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMYKQTDC-LEVIGYSDSDFAGCVDSRRSTSGYIFMLAGGAVSWRSAKQTLTATS 298          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig916.20568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151QLV5_CAJCA7.050e-4640.49Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P4YNZ8_9STRA3.910e-4538.27Retrovirus-related pol Polyprotein (Fragment) n=1 ... [more]
A0A5D3DI92_CUCME4.610e-4539.09Gag/pol protein n=2 Tax=Cucumis melo var. makuwa T... [more]
A0A2N9IUC8_FAGSY2.150e-4440.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A2K3MAN7_TRIPR5.050e-4437.86Retrotransposon protein putative Ty1-copia subclas... [more]
A0A438BZI3_VITVI1.440e-4339.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A445FBE9_GLYSO1.530e-4339.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A445FAJ6_GLYSO1.590e-4339.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A438HUL4_VITVI1.900e-4338.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A445FSL3_GLYSO1.910e-4340.25Peroxidase n=1 Tax=Glycine soja TaxID=3848 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig916contigF-serratus_M_contig916:227094..227798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score159.8
Seed ortholog evalue1.5e-36
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size705
Cds size705
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932659.1509182-CDS-F-serratus_M_contig916:227093..2277981622932659.1509182-CDS-F-serratus_M_contig916:227093..227798Fucus serratus maleCDSF-serratus_M_contig916 227094..227798 +
1690964408.7263176-CDS-F-serratus_M_contig916:227093..2277981690964408.7263176-CDS-F-serratus_M_contig916:227093..227798Fucus serratus maleCDSF-serratus_M_contig916 227094..227798 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig916.20568.1prot_F-serratus_M_contig916.20568.1Fucus serratus malepolypeptideF-serratus_M_contig916 227094..227798 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig916.20568.1

>prot_F-serratus_M_contig916.20568.1 ID=prot_F-serratus_M_contig916.20568.1|Name=mRNA_F-serratus_M_contig916.20568.1|organism=Fucus serratus male|type=polypeptide|length=235bp
MKAIGFEQAKVDPCVFRKVVVVVHVDDILAHAKDKATMDRFAAELGQKFK
LKDMGDAEYYMGCHITQNRKTRELKLDQHLYVESMIKRFDVKKEAKIPAA
SGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRV
VARFCENPGPAHKKAVMKIFQYLFHTKDWGITYGGQGCGLCMEAYTDSDF
GACLDTRRSVSGAVLMLAKGAISWHSRMQEVTANS
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mRNA from alignment at F-serratus_M_contig916:227094..227798+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig916.20568.1 ID=mRNA_F-serratus_M_contig916.20568.1|Name=mRNA_F-serratus_M_contig916.20568.1|organism=Fucus serratus male|type=mRNA|length=705bp|location=Sequence derived from alignment at F-serratus_M_contig916:227094..227798+ (Fucus serratus male)
ATGAAGGCGATTGGATTCGAGCAGGCAAAGGTGGACCCGTGCGTGTTCCG CAAGGTGGTGGTGGTCGTGCACGTAGACGACATCCTGGCCCACGCAAAAG ACAAAGCGACGATGGATAGATTCGCGGCCGAGCTCGGGCAGAAGTTTAAG TTGAAGGACATGGGGGACGCCGAATACTACATGGGTTGTCACATCACCCA GAACCGCAAGACGCGTGAGTTGAAGCTCGACCAACACCTGTATGTGGAGT CAATGATAAAGAGATTCGATGTCAAGAAGGAAGCCAAGATACCGGCTGCG TCGGGGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAAACCCAGAGGA GAAGGAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCA TGTGGACGGCGACGATGACACGGCCGGATATCGCGTGCGCCGTCCGCGTT GTGGCCAGGTTCTGCGAAAACCCTGGGCCGGCACACAAGAAGGCAGTGAT GAAGATCTTCCAGTATCTCTTTCACACGAAAGATTGGGGGATTACGTATG GTGGACAGGGCTGTGGACTCTGTATGGAAGCATATACGGATTCGGATTTC GGAGCCTGCCTGGACACAAGACGATCGGTTTCAGGTGCGGTGTTGATGTT GGCCAAGGGGGCGATTAGTTGGCACTCTAGGATGCAAGAAGTAACGGCAA ACAGT
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Coding sequence (CDS) from alignment at F-serratus_M_contig916:227094..227798+

>mRNA_F-serratus_M_contig916.20568.1 ID=mRNA_F-serratus_M_contig916.20568.1|Name=mRNA_F-serratus_M_contig916.20568.1|organism=Fucus serratus male|type=CDS|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig916:227094..227798+ (Fucus serratus male)
ATGAAGGCGATTGGATTCGAGCAGGCAAAGGTGGACCCGTGCGTGTTCCG
CAAGGTGGTGGTGGTCGTGCACGTAGACGACATCCTGGCCCACGCAAAAG
ACAAAGCGACGATGGATAGATTCGCGGCCGAGCTCGGGCAGAAGTTTAAG
TTGAAGGACATGGGGGACGCCGAATACTACATGGGTTGTCACATCACCCA
GAACCGCAAGACGCGTGAGTTGAAGCTCGACCAACACCTGTATGTGGAGT
CAATGATAAAGAGATTCGATGTCAAGAAGGAAGCCAAGATACCGGCTGCG
TCGGGGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAAACCCAGAGGA
GAAGGAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCA
TGTGGACGGCGACGATGACACGGCCGGATATCGCGTGCGCCGTCCGCGTT
GTGGCCAGGTTCTGCGAAAACCCTGGGCCGGCACACAAGAAGGCAGTGAT
GAAGATCTTCCAGTATCTCTTTCACACGAAAGATTGGGGGATTACGTATG
GTGGACAGGGCTGTGGACTCTGTATGGAAGCATATACGGATTCGGATTTC
GGAGCCTGCCTGGACACAAGACGATCGGTTTCAGGTGCGGTGTTGATGTT
GGCCAAGGGGGCGATTAGTTGGCACTCTAGGATGCAAGAAGTAACGGCAA
ACAGTATGAAGGCGATTGGATTCGAGCAGGCAAAGGTGGACCCGTGCGTG
TTCCGCAAGGTGGTGGTGGTCGTGCACGTAGACGACATCCTGGCCCACGC
AAAAGACAAAGCGACGATGGATAGATTCGCGGCCGAGCTCGGGCAGAAGT
TTAAGTTGAAGGACATGGGGGACGCCGAATACTACATGGGTTGTCACATC
ACCCAGAACCGCAAGACGCGTGAGTTGAAGCTCGACCAACACCTGTATGT
GGAGTCAATGATAAAGAGATTCGATGTCAAGAAGGAAGCCAAGATACCGG
CTGCGTCGGGGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAAACCCA
GAGGAGAAGGAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGC
GCTCATGTGGACGGCGACGATGACACGGCCGGATATCGCGTGCGCCGTCC
GCGTTGTGGCCAGGTTCTGCGAAAACCCTGGGCCGGCACACAAGAAGGCA
GTGATGAAGATCTTCCAGTATCTCTTTCACACGAAAGATTGGGGGATTAC
GTATGGTGGACAGGGCTGTGGACTCTGTATGGAAGCATATACGGATTCGG
ATTTCGGAGCCTGCCTGGACACAAGACGATCGGTTTCAGGTGCGGTGTTG
ATGTTGGCCAAGGGGGCGATTAGTTGGCACTCTAGGATGCAAGAAGTAAC
GGCAAACAGT
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