mRNA_F-serratus_M_contig915.20561.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig915.20561.1
Unique NamemRNA_F-serratus_M_contig915.20561.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: D7G5Q8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q8_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 3.780e-139
Identity = 199/255 (78.04%), Postives = 222/255 (87.06%), Query Frame = 2 
Query:   38 IMSTRVDATAEPTSGGKSRAVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGWADDEMRLREIKHGRLAMAAFAFHYAGVLLDKKGVVVGHQLWGEVCVINLKWGANPLPPPICYPRPEAALDTTLSWEIMWRVLTGFFKEPYY 802
            +MS+R+    + T   +S A+PFLPRP+ALDG+M+GDVGFDPLG A  DNLDRYREAELKHGRLAMVALAGWPVA++ L LLT L+PP TVCTGNGCAID+ +SGSALPLEAIG VSFVYWGSALALAVAAEL ++ +R  +   R GPD YR+GDLGLDPF  ADDEMRLREIKHGRLAMAAFAFHYAGVLL+KKGVVVGHQLWG VCV NLKWG + LPPPICYPRPEAALDTTLSWEIM+RVL+GFFKEPYY
Sbjct:    1 MMSSRLPVIPD-TDAPRSVALPFLPRPEALDGTMIGDVGFDPLGFAAEDNLDRYREAELKHGRLAMVALAGWPVATLFLGLLTKLIPPATVCTGNGCAIDQTWSGSALPLEAIGNVSFVYWGSALALAVAAELVAI-RRKQSSVGRVGPDEYRAGDLGLDPFNLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGMSSLPPPICYPRPEAALDTTLSWEIMYRVLSGFFKEPYY 253
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: A0A835ZHI1_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHI1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 8.660e-101
Identity = 154/240 (64.17%), Postives = 175/240 (72.92%), Query Frame = 2 
Query:   83 GKSRAVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGWADDEMRLREIKHGRLAMAAFAFHYAGVLLDKKGVVVGHQLWGEVCVINLKWGANPLPPPICYPRPEAALDTTLSWEIMWRVLTGFFKEPYY 802
            GKSRA+PFL  P      M GD GFDPLG AT DN+DR RE ELKHGRLAMVAL GWPVA ++L LL   VPP TVCTG+GC +D   S  ALPL+AIGR   VYW SALALA+ AE+ +L +R +      GPD    GDLG+DPF  A D+MRL+E+KHGRLAMAAFA HYAGVL   KGVV  HQ+W +VCV N +      P PICYPRPEAALDT LSWEIM+RVLTG+FKEPYY
Sbjct:   10 GKSRALPFLQAPFFAGSDMTGDAGFDPLGFATEDNIDRMRECELKHGRLAMVALGGWPVAELVLGLLQRAVPPATVCTGSGCTVDSSLSAYALPLQAIGRFGAVYWASALALAIVAEVAALKRRQEW-----GPD-LPLGDLGVDPFKLASDDMRLKELKHGRLAMAAFAVHYAGVLAKNKGVVFAHQMWSQVCVYNFRADLG-FPAPICYPRPEAALDTVLSWEIMFRVLTGYFKEPYY 242
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: A0A0M0K4A5_9EUKA (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K4A5_9EUKA)

HSP 1 Score: 200 bits (509), Expect = 1.560e-57
Identity = 124/250 (49.60%), Postives = 148/250 (59.20%), Query Frame = 2 
Query:   86 KSRAVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSG--SALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGW---ADDEMRLR----EIKHGRLAMAAFAFHYAGVLLDKKGVVVGHQLWGEVCVINL-KWGANPLPPPICYPR-PEAALDTTLSWEIMWRVLTGFFKEPYY 802
            +S +VPFLPRP ALDG+M+GDVGFDPLG+AT  NL R REAEL+HGRLAMVA  GWP+A    AL   LVP  TVCTG GC +D+   G  +AL L  IG+VS  YWGS LALAV  EL          R R G           DP      ADD  R+R    E+KHGRLAM A A +++  LL           WGE CV +L +  A  L    CYP+    A D  LSWEI++R LTG+F+EPY+
Sbjct:   22 RSISVPFLPRPAALDGTMIGDVGFDPLGIATTANLARMREAELRHGRLAMVATWGWPIAEGGFALAQKLVPVSTVCTGVGCYVDKTDEGRQAALQLADIGQVSIAYWGSLLALAVHGEL----------RARQG--------CYFDPLRLYVDADDTERVRLQLAELKHGRLAMCAVATYWSTKLL-----------WGETCVYSLTRQSAQAL----CYPQYTNEAFDYVLSWEILFRTLTGYFREPYF 238
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: A0A7S0L6L5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L6L5_9EUKA)

HSP 1 Score: 189 bits (479), Expect = 8.850e-53
Identity = 117/268 (43.66%), Postives = 148/268 (55.22%), Query Frame = 2 
Query:   71 PTSGGKSRAVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAID--EPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFG-WA------DDEMRLREIKHGRLAMAAFAFHYAGVL--------------LDKKGVVVGHQLWGEVCVINLKWGANPLPPPICYPR-PEAALDTTLSWEIMWRVLTGFFKEPYY 802
            P +  +S A+PF+P P +LDGS+VGD GFDPLGLAT ++L R R AEL+H RLAMVA  GWP+A     +   LVP ++VCTG GC +D  E    +AL L  IG +S  YWG  LA A+A EL          R RS  +G  SG    DP   W        + + L EIKHGRLAM A A H+A  L              + K  +   HQLW + CV +L          ICYP+      D  LSWEIM+RV+TG+F+EPY+
Sbjct:   15 PNAPRQSLALPFIPAPLSLDGSLVGDAGFDPLGLATVESLPRLRAAELRHARLAMVATWGWPIAESGFWIAQKLVPVKSVCTGGGCYVDSTEGARQAALQLADIGVISVGYWGLLLAAAIAGEL----------RARS-LEG--SGQPAFDPLSLWTAADAPEQERLELAEIKHGRLAMVAIAAHWATKLGAACGSAAAAAAAGVPKGTLTFAHQLWSQTCVYSLTKQTT-----ICYPQFTNDQFDFILSWEIMFRVVTGYFREPYF 264
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: R1D3G8_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D3G8_EMIHU)

HSP 1 Score: 172 bits (435), Expect = 5.910e-47
Identity = 107/249 (42.97%), Postives = 138/249 (55.42%), Query Frame = 2 
Query:   71 PTSGGKSR--AVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSG--SALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGWADDEMRLREIKHGRLAMAAFAFHYAGVLLDKKGVVVGHQLWGEVCVINLKWGANPLPPPICYPRPEAA-LDTTLSWEIMWRVLTGFFKEPYY 802
            PTS    R  A+P L  P      M+GD+GFDPLGLAT DNL R REAE++HGRLAMVA  GWPVA +  A+   L+P  +VC+G+GC +D   +G  +AL L  IG +S  YWG+ LA   AA  G  +   D  RLR                      + L E+KHGRLAMAA A H+A  L   +G        GE CV +       +   +C P+  AA  D  LS+EI++RVLTG+F+EPY+
Sbjct:    3 PTSPSTPRSVAIPLLQSP------MIGDLGFDPLGLATADNLQRMREAEVRHGRLAMVAAWGWPVAEVGFAVAQRLLPVSSVCSGDGCGVDRTEAGRQAALQLSDIGLISACYWGALLA--AAARRGCAF---DPLRLR----------------------LELAELKHGRLAMAAVALHWATKLAGARGSAAAALAAGETCVYSAAESLRSVQG-VCMPQWTAAPFDAVLSYEILFRVLTGYFREPYF 217
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: R1CT78_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CT78_EMIHU)

HSP 1 Score: 122 bits (307), Expect = 1.460e-29
Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 2 
Query:   86 KSRAVPFLPRPKALDGSMVGDVGFDPLGLATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSG--SALPLEAIGRVSFVYWGSALALAVAAEL 436
            +S A+P L  P      M+GD+GFDPLGLAT DNL R REAE++HGRLAMVA  GWPVA +  A+   L+P  +VC+G+GC +D   +G  +AL L  IG +S  YWG+ LA AV  EL
Sbjct:   21 RSVAIPLLQSP------MIGDLGFDPLGLATADNLQRMREAEVRHGRLAMVAAWGWPVAEVGFAVAQRLLPVSSVCSGDGCGVDRTEAGRQAALQLSDIGLISACYWGTLLAAAVTGEL 133
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: B7G4U8_PHATC (Protein fucoxanthin chlorophyll a/c protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4U8_PHATC)

HSP 1 Score: 123 bits (309), Expect = 1.990e-28
Identity = 82/201 (40.80%), Postives = 115/201 (57.21%), Query Frame = 2 
Query:   56 DATAEPTSGGK-SRAVPFLPRPKALDGSMVGDVGFDPLGLA-TPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGW------ADDEMRLREIKHGRLAMAAFAFHYAGVLLDKKGVV 634
            D T  P +  K S+++PF+ RP ALDG++VGDVGFDPLG A T  +L  YREAE+KH RLAM+A AGWP++ +  A +   +    +   N  A        +L    +G+VS VYW + L  A A ++  + K    E     PD Y  G+LG+DPFG       A ++M+L+E+K+GRLAM A +       + K GVV
Sbjct:   48 DVTPPPPALPKMSQSLPFMERPAALDGTLVGDVGFDPLGFAKTKADLINYREAEVKHARLAMLAAAGWPLSELFDAKIANWMGMTPLLDANDRA-------PSLLNGGLGKVSPVYWVACLVAAAAIDVYGISKARKNE-----PD-YFPGNLGIDPFGLFPKDAAAQEDMKLKELKNGRLAMIAISAFAFQEFVSKFGVV 235
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BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: K0T6G6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6G6_THAOC)

HSP 1 Score: 122 bits (307), Expect = 3.700e-28
Identity = 81/210 (38.57%), Postives = 110/210 (52.38%), Query Frame = 2 
Query:   32 PPIMSTRVDATAEPTSGGKSRAVPFLPRPKALDGSMVGDVGFDPLGLA-TPDNLDRYREAELKHGRLAMVALAGWPVASII---LALLTGLVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGWADDE-----MRLREIKHGRLAMAAFAFHYAGVLLDKKGVV 634
            P +M+      A      +S ++PFL RP ALDG+MVGDVGFDPLG A   D+L  YREAE+KHGRLAM+A AGWP++ +    +A   G+ P           +D      +L    +G++S  YW   L  A   ++          +LR   DGY+ GD GL   G+  DE     M+L E+K+GRLAM A         + K+GVV
Sbjct:   45 PAVMAVESSGAAAAALPAQSASIPFLARPAALDGTMVGDVGFDPLGFAKNKDDLANYREAEIKHGRLAMLAAAGWPLSELFDKKIAAALGMAP----------VLDASDRVPSLLNGGLGKISPAYWIGCLGAAALVDV--------LGQLRMKGDGYQPGDYGL-RLGYPADEAGRERMQLAELKNGRLAMIAIFGFAVQEFVTKQGVV 235
[Close]
BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: A0A7S1Z9W6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z9W6_TRICV)

HSP 1 Score: 118 bits (295), Expect = 1.380e-26
Identity = 84/217 (38.71%), Postives = 114/217 (52.53%), Query Frame = 2 
Query:   14 ANMNKAPPIMSTRVDATAEPTSG--GKSRAVPFLPRPKALDGSMVGDVGFDPLGLAT-PDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPD-GYRSGDLGLDPFGW--ADDE----MRLREIKHGRLAMAAFAFHYAGVLLDKKGVV 634
            AN  K P + S+ + A+     G    S A+PFL RPK L G + GDVGFDPLG AT P+ L  YREAE+KH RLAM+A AGWPV+ +    +   +  E V       +D      ++    + ++S V+WG  + L  A +L  + +   A      PD GY  G+LG DP G   +D E    M+L EIKHGR AM A         + ++GVV
Sbjct:   23 ANSVKCPNLESSALKASGVAQDGLPKMSTAIPFLERPKFLTGELAGDVGFDPLGFATNPELLIEYREAEIKHARLAMLAAAGWPVSELYDKKIAAYLGMEPV-------LDAADRVPSVLNGGMDKISPVWWGFCVGLTAAIDLYGVRRARSAR-----PDSGYFPGNLGFDPLGLYPSDKEGQKNMQLAEIKHGRTAMMAVLAFVLQEAISREGVV 227
[Close]
BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Match: A0A7S3Q9Z2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Z2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.650e-26
Identity = 76/183 (41.53%), Postives = 102/183 (55.74%), Query Frame = 2 
Query:   86 KSRAVPFLPRPKALDGSMVGDVGFDPLGLA-TPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTG---LVPPETVCTGNGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAERLRSGPDGYRSGDLGLDPFGWADDE--------MRLREIKHGRLAMAAFAFH 598
            +S+A+PF+ RP  LDGSM GDVGFDPLGLA +P  L  +REAE+KH RLAM+A AGWP++ ++   + G   L P          A+D   +G A P  A+      YW   LA A   ++   +   D +      + Y  G+LG DP G+  D+        M+L EIKHGR AM AFAF+
Sbjct:   61 QSKAIPFMERPDLLDGSMAGDVGFDPLGLAKSPKMLRMFREAEVKHARLAMLAAAGWPLSELLDKKIAGFFNLAP----------ALDA--AGRATP-SALSHTIDSYWIGVLAFAAIVDIYGTYVALDND------EDYFPGNLGFDPMGFYPDDSDPKGQKAMQLAEIKHGRTAMMAFAFY 224
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig915.20561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q8_ECTSI3.780e-13978.04Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A835ZHI1_9STRA8.660e-10164.17Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A0M0K4A5_9EUKA1.560e-5749.60Protein fucoxanthin chlorophyll a c protein n=1 Ta... [more]
A0A7S0L6L5_9EUKA8.850e-5343.66Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1D3G8_EMIHU5.910e-4742.97Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
R1CT78_EMIHU1.460e-2952.94Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
B7G4U8_PHATC1.990e-2840.80Protein fucoxanthin chlorophyll a/c protein n=2 Ta... [more]
K0T6G6_THAOC3.700e-2838.57Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1Z9W6_TRICV1.380e-2638.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3Q9Z2_9STRA1.650e-2641.53Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig915contigF-serratus_M_contig915:218399..224875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.8
Seed ortholog evalue2.5e-112
Seed eggNOG ortholog2880.D7G5Q8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2C5UI@1,2S2YV@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-12_008770.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1542
Cds size786
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig915.20561.1prot_F-serratus_M_contig915.20561.1Fucus serratus malepolypeptideF-serratus_M_contig915 219136..224856 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932657.6124382-UTR-F-serratus_M_contig915:218398..2191351622932657.6124382-UTR-F-serratus_M_contig915:218398..219135Fucus serratus maleUTRF-serratus_M_contig915 218399..219135 -
1690964407.7400205-UTR-F-serratus_M_contig915:218398..2191351690964407.7400205-UTR-F-serratus_M_contig915:218398..219135Fucus serratus maleUTRF-serratus_M_contig915 218399..219135 -
1622932657.757962-UTR-F-serratus_M_contig915:224856..2248751622932657.757962-UTR-F-serratus_M_contig915:224856..224875Fucus serratus maleUTRF-serratus_M_contig915 224857..224875 -
1690964407.8551052-UTR-F-serratus_M_contig915:224856..2248751690964407.8551052-UTR-F-serratus_M_contig915:224856..224875Fucus serratus maleUTRF-serratus_M_contig915 224857..224875 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932657.6299613-CDS-F-serratus_M_contig915:219135..2192201622932657.6299613-CDS-F-serratus_M_contig915:219135..219220Fucus serratus maleCDSF-serratus_M_contig915 219136..219220 -
1690964407.7531571-CDS-F-serratus_M_contig915:219135..2192201690964407.7531571-CDS-F-serratus_M_contig915:219135..219220Fucus serratus maleCDSF-serratus_M_contig915 219136..219220 -
1622932657.6470773-CDS-F-serratus_M_contig915:219449..2195351622932657.6470773-CDS-F-serratus_M_contig915:219449..219535Fucus serratus maleCDSF-serratus_M_contig915 219450..219535 -
1690964407.7702315-CDS-F-serratus_M_contig915:219449..2195351690964407.7702315-CDS-F-serratus_M_contig915:219449..219535Fucus serratus maleCDSF-serratus_M_contig915 219450..219535 -
1622932657.6644783-CDS-F-serratus_M_contig915:219784..2198771622932657.6644783-CDS-F-serratus_M_contig915:219784..219877Fucus serratus maleCDSF-serratus_M_contig915 219785..219877 -
1690964407.787523-CDS-F-serratus_M_contig915:219784..2198771690964407.787523-CDS-F-serratus_M_contig915:219784..219877Fucus serratus maleCDSF-serratus_M_contig915 219785..219877 -
1622932657.6833363-CDS-F-serratus_M_contig915:220143..2203131622932657.6833363-CDS-F-serratus_M_contig915:220143..220313Fucus serratus maleCDSF-serratus_M_contig915 220144..220313 -
1690964407.806155-CDS-F-serratus_M_contig915:220143..2203131690964407.806155-CDS-F-serratus_M_contig915:220143..220313Fucus serratus maleCDSF-serratus_M_contig915 220144..220313 -
1622932657.6989372-CDS-F-serratus_M_contig915:221056..2211381622932657.6989372-CDS-F-serratus_M_contig915:221056..221138Fucus serratus maleCDSF-serratus_M_contig915 221057..221138 -
1690964407.8173273-CDS-F-serratus_M_contig915:221056..2211381690964407.8173273-CDS-F-serratus_M_contig915:221056..221138Fucus serratus maleCDSF-serratus_M_contig915 221057..221138 -
1622932657.7135549-CDS-F-serratus_M_contig915:223988..2240821622932657.7135549-CDS-F-serratus_M_contig915:223988..224082Fucus serratus maleCDSF-serratus_M_contig915 223989..224082 -
1690964407.828491-CDS-F-serratus_M_contig915:223988..2240821690964407.828491-CDS-F-serratus_M_contig915:223988..224082Fucus serratus maleCDSF-serratus_M_contig915 223989..224082 -
1622932657.7276967-CDS-F-serratus_M_contig915:224386..2244911622932657.7276967-CDS-F-serratus_M_contig915:224386..224491Fucus serratus maleCDSF-serratus_M_contig915 224387..224491 -
1690964407.8366935-CDS-F-serratus_M_contig915:224386..2244911690964407.8366935-CDS-F-serratus_M_contig915:224386..224491Fucus serratus maleCDSF-serratus_M_contig915 224387..224491 -
1622932657.7418218-CDS-F-serratus_M_contig915:224785..2248561622932657.7418218-CDS-F-serratus_M_contig915:224785..224856Fucus serratus maleCDSF-serratus_M_contig915 224786..224856 -
1690964407.844752-CDS-F-serratus_M_contig915:224785..2248561690964407.844752-CDS-F-serratus_M_contig915:224785..224856Fucus serratus maleCDSF-serratus_M_contig915 224786..224856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig915.20561.1

>prot_F-serratus_M_contig915.20561.1 ID=prot_F-serratus_M_contig915.20561.1|Name=mRNA_F-serratus_M_contig915.20561.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MNKAPPIMSTRVDATAEPTSGGKSRAVPFLPRPKALDGSMVGDVGFDPLG
LATPDNLDRYREAELKHGRLAMVALAGWPVASIILALLTGLVPPETVCTG
NGCAIDEPFSGSALPLEAIGRVSFVYWGSALALAVAAELGSLWKRSDAER
LRSGPDGYRSGDLGLDPFGWADDEMRLREIKHGRLAMAAFAFHYAGVLLD
KKGVVVGHQLWGEVCVINLKWGANPLPPPICYPRPEAALDTTLSWEIMWR
VLTGFFKEPYY*
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mRNA from alignment at F-serratus_M_contig915:218399..224875-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig915.20561.1 ID=mRNA_F-serratus_M_contig915.20561.1|Name=mRNA_F-serratus_M_contig915.20561.1|organism=Fucus serratus male|type=mRNA|length=6477bp|location=Sequence derived from alignment at F-serratus_M_contig915:218399..224875- (Fucus serratus male)
ACGCGAATCCAACGCCAACATGAACAAGGCACCGCCGATCATGTCTACCA
GGGTAGACGCTACCGCCGAGCCTACCTCTGGGGGGAAAAGGTGGGCATGG
GTGACCTACAGCTACATAAGCTCGCGTAGGCCTAGGTGTCCATACTCCGA
AGGTTGGTGGTTTGCGGGCCGTGGCTCTTGGAAGTGAATTATTTTCAAGT
CCATTCATTATCTTCCTGTCTGTCGCTGACCAGTGATGAAGTTATCAATC
ACCTCATCGGTAGTTTCCCGTTCGCTACCACCCGAGATTTCGATACATCT
TTCTCTGTGTTTGCGCGTCCGTCTTGGGGGTGTTCATATGTGCGGGTATA
TTTCCTCTCAATATCGTGCATGCGGGTGTTCCAGTCGGGCGGTGCCGTTT
CTCCCTCGGCCGAAGGCGCTCGACGGAAGCATGGTCGGCGACGTTGGCTT
CGACCCACTCGGATTGGCCACTCCAGACAATTTGGACCGGTAAGTCAGTC
GAAAGAGCTGGCCAGGAACGACTACCAGAAGCCGAGGGTAAGGCGGCAGA
TGCGTAACCCCCAAGTGTTGAAAGTAGTTTCAAAGTTTCAAGCGTTGGTA
TTTATATAATTCCCTGGAGCTTTAGTTTCAAGGCGTGGTCAAAACCCCAG
ACTGTTCAGCCAACGTAGGGCTTGATGTTGATGGGGTACCTCCATATTTC
GTCGAGTTATGATTTATTCGCGTGGTTTTCAGGAGAAACGTTTGAAATTA
TTAATGAGAGCATCTTGGGGGGGGGGGGGGGGGGGATATCCAGGTACCGA
GAGGCTGAGCTGAAGCACGGGCGTCTCGCTATGGTTGCGCTCGCTGGATG
GCCGGTCGCCTCTATCATTCTCGCACTGCTGACGGGGGTAAGACCTGGAT
ATACAGCTAGGTACTCTAATGTCGATATCTTTGCATGGCAGAGTTCGGAC
ATCGCAAGTAGGAGCCGGCTTGAACTGACAGCTCTTCCAGACGCCTTTGG
AACTCCTGCCTGATTCCCTATTGAGAGACCTCATCAAGACGTGTTACCGA
GACATATGACATGCACTTCCGTGCCTTCATCAGTGTTCTTCCACACCATT
CAATCATGTCATTCTCACACGCTTGTATCATGAAGTCAAACATTGTCAAA
CATATTAACCAGAGTGGACCAGCAGACCAACGTGCTGGCATTTGCAACCA
ACCAAGAGGAGAACGTTGTTTGGGGTGTATCGCGTCGTGAAATGGATCGA
GTTCATGACGAACGCAATTTTGCATACTATATATAGATATATTTTTAAAT
CATACTTATAGCCGATGGATCTCTAATTACCATCCTGCCTGTGGTCACAA
AGGATCTTCCCATCTATCCCCGGTTCACGCCTTACGAACTTTTATCGCGA
TGCAAGTTCAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTT
ACTCACGTTCCCACGCTTTCCGTTACGAAAGAAAGAACTAAGCTAAGAAT
CGAACTCACGACTTCCGCACTAGCAGGTATGCAGGTTACCTACTAGACCA
CTCGGGCGACGTTGTATATAATAAATATAGTAGTTACTTTAATAGAGGTT
AGACAGGATGGAGACGGCGACAATGACTGGAAGTGATCGTACGGCCTCGC
CATACCAGTTTCACAAAACTGTCCGATTATATTAACAGCAGACAGTAAGA
TATCATACGGTACATTTTGGCGCAATACACGCAATACATGATAGTTCGAA
ATGACTACTGTAGCTCTACAGTTGATGGCGATTCGGCCACATTTTTACGG
TACGGTACATTGCGACAAAAAAGTCGTAGGCGAGAATTGGGGAAAGCTGT
GAGATCCTTTGGGACACAGGCAGGATGGTAATGACAACGTTGCAGTAGGT
GGGATTGATAACCTAGCACGTTGAGCCCCATTGACCGTTAAGTGAAGTAC
GAACAGAAAGAAAAGCATTCCGGCGTGGCAAGGTGGAGAATTCGTACCGA
TAAGTTTGGTATGGAGAGGTACGAGCACACGGTTCGGTAAACGGTTGAGT
ATACAAGTACGGCATTGTACACGATACGGAACTGCGTACGGAACTGCATA
TTTAAATGCTTCCGATTCTTTGTGTATCACACATGTCCACTATTGAAACA
CTATTGAAACACTATTGAAACATACAAATAGTGGGCGTGGAAAAAGAGAG
GCGGACTTAAATTGGTCATAGTCCATTGTGATACCTGAAAAGGCAGCACC
CTTTACTCGAACTACCTTGAGGACTTCTGGCTCTGTGTTGGTAGACTCTC
GGCAGTGAACGCCATCGGTACGTAATTGCGTGACCTGATGAACTCGGGAC
TGACCCGATGGCGTATGGCGGTTTAAATAAATGGACGCCAACGCGGAAAG
CGAGAGAAATCCCACGAGTAAGCACAAGATTTAGCCTGAGTGTGGAGAGT
GAGCAGGCTGACGCGGGACGGGACGACCAAACCTGTCTCGCGAAATCAAA
CTACACCGCGCGAGCGGGGACAGGGAAACAAGTTTTCCCTGTTAAGCTGA
CCACGAGCAGGATTGGCAACCTTACCAGGTTGATCCATACTGTGCGGAAA
TTTCTGACGATACGTGCGTCCTACGAGTAGCACGATACGATTAACTGGAA
TCTCTTCCGTGTACCTGAGTCGACCTCTTGACCCGGCGGCGACGAGGTTC
TTGACAAGACGTGCGCACCCGAATACTTCGTTGAGGATTCCGCCTCGCCG
CCATCCGTTCTCGACAGTTGGCGTTTCGAAAACAACGGATACCGGTACTT
TCCACCCGCCAGATAGAAGTACTTTGCGCTATGAGAAAGTTGCGTGTTTG
TTTTCAGTTATTATTTCCATCGTTAACCAGTACAAATCAGAACAATATCA
AGTTAAATCGTGTCAATGTCAATGTCAGTGTGCGTTTGGCCTGAAAGTAA
GGACACTACCATCTGCCATCTACTATCTACTATCTACCATCTACCATGGG
AATTGCGTACCGTTACTCTACGCCATGCTGCGAGTTTTCTATACGCTCGT
TGGAGCTTGTAGACTTTTCTCTGATCTTTCTCTGTCCAGCCAGAACACAT
ATCGGATTGGCAATCGCCTACCGGTATTACTTAGTAGGGTTGAAGCCCGA
TCGGTTAGTATTAGTATGAAGTGGACACTGTCGCGGAAAGCGGGAGGAAG
GAGAAGAGTCCGTGAGTAAGAACCAGATTCAGCCTGAGTTTGAAGAATGA
TGGGCTGACGCGGGACCAGATGACCGAACCTGTTTCGCGAGACCAAATTC
TGCGGCGCGAACGGGGACAGGTAGAACATTATTTTCGCTGTTTAACTGAC
CGCGAGGAGGATTGGTAACCACCATACTTGGTTGATGCCCAGTCGGCTAG
AAGTAACGAGCATAGATACATACCTTGAAGAGTTTCAGCGTGAAGAGGCG
TTAGTGGGTGAAATATGGCTGAAGCACCATCAAGTCCTGAGCGTTGCGTG
CGTGTTGTTGATATTAATTGTTCTGTATACTTTTCGTCGTTGAGTTTCCC
CTTAAACATACAGCTATTCCGCTGACACAGCAACAGTTGAGCACATTTGA
GCCTTTGAATGACTTCGATGAGGGCCACGCTAGTTTTGCATCATTGCACC
GCTGTTGCTCTGAATGACTACTGTAATATAACTATTAATGCTGTGCCTTT
CCTGCAATCATATTATTGTAAATGGCGAATCCGCCAGCTCGTGCCCCCCG
AGACTGTGTGCACTGGGAACGGTTGCGCCATCGACGAACCCTTTTCGGGG
AGCGCTCTTCCTCTCGAAGGTGCGTAGCTCTCTACGCCTGTAGCCACGTT
TGTCCCTGACTCTTTTATACCCTCATCCGGAGCGGGGTTCCTTTCCTCGA
GGCTCCATGGTTCAAACCTTTTCCAATTGTTTTGTGCTATGATATTGTAC
ATTTTAATGGGCTTCTTGCTTACTATCAAGGATAGAAGCTTCTGAAGGCA
TCAAACTGTCGATGGAGACCCCAGAGACAATAATGTGCCATTCCTGCAGG
AACTCGTCCGTAAGTACCACCGTTGTACTTTGTACCAGGTACTTAGTTTC
AAAGAAGAGAGTAGCGATGGGGCGTTTCCAACATTGTCCCAGAAAATGCC
GCTGCTGCTCGGTTGCACGCGCGATAAGCGTGTTGTTACGATTCCAAGTT
AATTCTGCCTATTTGGCGCCCGGGGCGTTTGCCGCAGACGCAAACGCCTT
TATTTTGCTCTAAATAAAACTAATAATAATAGCGCAAGATGCGCGCGTTC
CCAACATATGTCACGTGGCGTCACTTCGGGGGAATCATGCCAGTACAGTT
AAAAGTAATGTATAGTAGTGGAGCAATGTTGTGATTGCACTGCTGCACTG
CTCATAATATCATACGATTGGACGGAGGGGGGCGGGCGAGAAGGTCACAG
CCCAAATGATCATGCAAGAATGTAGCACTGTTCTGGAGATTGCTTGAAAG
GGTGTGGACTCTTTTAAGTATAGTACCGTAGCATTTTCCTGTCGGCCTTC
GTTTTCGGTCAGCTATCGGCAGGGTGTCGTTCGTTTACTGGGGATCGGCG
CTAGCCCTCGCTGTCGCGGCGGAACTAGGATCGCTCTGGAAGCGATCGGA
CGCGGAGCGATTACGAAGTGGGCCTGACGGTTACAGATCGGGAGATCTTG
GATTGGATCCATTCGGCTGGGCGGATGACGAGGCAAGAATGTTTCCATAA
ATGTTGTTCCGTCAAACCCGCCAGCAATCTTGTTATTTTGTTGTCCACAC
CTGACTCGGGGAGAAGGTGCGTCGTCCCTTCATTTTCGACTCCTTTTCTT
GTTCCAGTTATAAGAGCACATTCGGGAGTTCCACCCACCGTACAAAGAGG
CGTTAGTTTTCGCACTGGTTCCACGATATCATCGCCCAACACAATCCTTT
CGTGCCGTTTGCTTCGTGGTGTATACAAAAACCAACGATTTGCGGCAGAT
GCGACTGCGCGAAATCAAGCACGGGCGCCTCGCGATGGCTGCTTTTGCTT
TCCACTACGCCGGGGTTTTGTTGGATAAAAAAGGCGTCGTGGTGAGCGCG
CGAAAGAGAAAATCCCGCGCGCGAGTTCGCCCATAAAGCGAGCTCGTTTA
GATGTTCCAGCACAGTATGCTTGTTTTGTATTTCGCATCACAAGTCGGCG
CATGAGAACATTATCTTGGTGTCTTAACCCGATCCCAACAGCCACCCCTC
TCTCATCAGTAGAAGATTGGACTCGAATGAAGCGTTTTGATCTCCTTGCT
CATTTTCTCTCCCTTTTGAACGGGACACGGTGGCTTTCAGGTAGGGCATC
AACTGTGGGGAGAAGTTTGCGTGATCAACCTCAAGTGGGGCGCAAACCCT
CTTCCCCCCCCCATCTGCTACCCAAGGTTCGTGACTCTGTCGTCGCAGTA
AGAAGAATAAGCGATGTTGTAGACCTGCTCCACAGTGTCAAACATTCATG
TGCGTCACTTTTTGATGGAGCCAGTTAACGTTCAAGGTTAACATTTCTGG
TCCTCTGGTCCCCTGCGCATCGTGAGCTCATATTCGTCTTTGTGCTTCAC
GTGGTTCCTCCATCTTTGCTCTTCCCCTCGCGGGACTGTGCGGGGCGGTG
TTCAGGCCCGAGGCCGCACTGGATACAACGTTAAGCTGGGAGATCATGTG
GAGGGTGCTCACTGGTTTCTTCAAGGAGCCTTACTACTAGTTGTAGGGGC
CGGCTGCGTAGCACCACTCAATTGTACAGGCACGCCTCGTGCCTGTCTGT
TGTAGGAAGGCAGTGACGCACACCACGAGGCGGGAGAAGCTGTAGATGGG
AGAGTAGACGTCAAGAGGCAACATAACGGTACGAGAGAGGCCCGCTTGTG
AGACTCTGCGGGCAATTCTCGCTTCGCTTCGCGCTCTCGGATTCCTCGGC
ATGATCTCCACGACTTATGGCTTTGGATCCCAACATATTATCCCAAGAGT
TGTCATCAATGTTGATACTGTAATTAAGTACCAGTCGGACGGAGTAAACC
CAACATATTATACCAAGAGTTGTCATCAATGTTGATGCTGTAATTAAATA
CCAGTCGGATGGAGTAAAGCTTTTGGTTTTCAATTGTTTAAACTCATTGT
TTCTTGCTAAATCTTGCTGATTACCATTACCATAGTTTGTGATTGCTGTT
ATCGCTTTAGGGGGCACGAGAGTTGATGCCAGTTGCCTGGATTCAGGCGT
ACCCTTGCAGTATATCAAATCAGTTGAAAGAGAAGGCTGTTGAGTCCTTG
ATATAATTGGCCGATGGGTGGGCGAAGGACACCATGATCAAGTGTAAATT
TGGAAATGTTTTTTCCGCCCCTTTGCCTCACAAATTCAATTACGGTATGA
GGTGAAGATACATATTTCCGAAACTCGATGTTAATGAATTTCAATATTTC
AATCCAAAGTTTACGCTGTCGAGTTCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig915:218399..224875-

>mRNA_F-serratus_M_contig915.20561.1 ID=mRNA_F-serratus_M_contig915.20561.1|Name=mRNA_F-serratus_M_contig915.20561.1|organism=Fucus serratus male|type=CDS|length=1572bp|location=Sequence derived from alignment at F-serratus_M_contig915:218399..224875- (Fucus serratus male)
ATGAACAAGGCACCGCCGATCATGTCTACCAGGGTAGACGCTACCGCCGA
GCCTACCTCTGGGGGGAAAAGATGAACAAGGCACCGCCGATCATGTCTAC
CAGGGTAGACGCTACCGCCGAGCCTACCTCTGGGGGGAAAAGTCGGGCGG
TGCCGTTTCTCCCTCGGCCGAAGGCGCTCGACGGAAGCATGGTCGGCGAC
GTTGGCTTCGACCCACTCGGATTGGCCACTCCAGACAATTTGGACCGTCG
GGCGGTGCCGTTTCTCCCTCGGCCGAAGGCGCTCGACGGAAGCATGGTCG
GCGACGTTGGCTTCGACCCACTCGGATTGGCCACTCCAGACAATTTGGAC
CGGTACCGAGAGGCTGAGCTGAAGCACGGGCGTCTCGCTATGGTTGCGCT
CGCTGGATGGCCGGTCGCCTCTATCATTCTCGCACTGCTGACGGGGGTAC
CGAGAGGCTGAGCTGAAGCACGGGCGTCTCGCTATGGTTGCGCTCGCTGG
ATGGCCGGTCGCCTCTATCATTCTCGCACTGCTGACGGGGCTCGTGCCCC
CCGAGACTGTGTGCACTGGGAACGGTTGCGCCATCGACGAACCCTTTTCG
GGGAGCGCTCTTCCTCTCGAAGCTCGTGCCCCCCGAGACTGTGTGCACTG
GGAACGGTTGCGCCATCGACGAACCCTTTTCGGGGAGCGCTCTTCCTCTC
GAAGCTATCGGCAGGGTGTCGTTCGTTTACTGGGGATCGGCGCTAGCCCT
CGCTGTCGCGGCGGAACTAGGATCGCTCTGGAAGCGATCGGACGCGGAGC
GATTACGAAGTGGGCCTGACGGTTACAGATCGGGAGATCTTGGATTGGAT
CCATTCGGCTGGGCGGATGACGAGCTATCGGCAGGGTGTCGTTCGTTTAC
TGGGGATCGGCGCTAGCCCTCGCTGTCGCGGCGGAACTAGGATCGCTCTG
GAAGCGATCGGACGCGGAGCGATTACGAAGTGGGCCTGACGGTTACAGAT
CGGGAGATCTTGGATTGGATCCATTCGGCTGGGCGGATGACGAGATGCGA
CTGCGCGAAATCAAGCACGGGCGCCTCGCGATGGCTGCTTTTGCTTTCCA
CTACGCCGGGGTTTTGTTGGATAAAAAAGGCGTCGTGATGCGACTGCGCG
AAATCAAGCACGGGCGCCTCGCGATGGCTGCTTTTGCTTTCCACTACGCC
GGGGTTTTGTTGGATAAAAAAGGCGTCGTGGTAGGGCATCAACTGTGGGG
AGAAGTTTGCGTGATCAACCTCAAGTGGGGCGCAAACCCTCTTCCCCCCC
CCATCTGCTACCCAAGGTAGGGCATCAACTGTGGGGAGAAGTTTGCGTGA
TCAACCTCAAGTGGGGCGCAAACCCTCTTCCCCCCCCCATCTGCTACCCA
AGGCCCGAGGCCGCACTGGATACAACGTTAAGCTGGGAGATCATGTGGAG
GGTGCTCACTGGTTTCTTCAAGGAGCCTTACTACTAGGCCCGAGGCCGCA
CTGGATACAACGTTAAGCTGGGAGATCATGTGGAGGGTGCTCACTGGTTT
CTTCAAGGAGCCTTACTACTAG
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