mRNA_F-serratus_M_contig915.20553.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: D8LN00_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN00_ECTSI) HSP 1 Score: 198 bits (503), Expect = 4.390e-62 Identity = 85/122 (69.67%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASSE 366
++YNHNLYWNSLSP+GGG PTGDL AI AFG++ DF+ FT A+GHFGSGWAWL++ ED ++DVVDSHDA NPVSE GFPLL CDVWEHAYY+DY+NLRA Y++ +W LVNW+YA SE
Sbjct: 96 QIYNHNLYWNSLSPSGGGMPTGDLYTAIVAAFGSYEDFQTAFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPVSEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESE 217
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: D7FRS6_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS6_ECTSI) HSP 1 Score: 193 bits (490), Expect = 4.000e-60 Identity = 81/122 (66.39%), Postives = 101/122 (82.79%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASSE 366
++YNHNLYWNSLSP+GGG P GDL AI+ AFG++ +F+ FT A+GHFGSGWAWL++ ED ++DVVDSHDA NP S+ GFPLL CDVWEHAYY+DY+NLRA Y++ +W LVNW+YA SE
Sbjct: 96 QIYNHNLYWNSLSPSGGGVPEGDLYTAIQSAFGSYEEFQTTFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPESDGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESE 217
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.350e-53 Identity = 70/121 (57.85%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASS 363
+++NH YWNS+SPNGGGEP+G + +AI +FG+F FK+ F+++A GHFGSGWAWL +D +L++VD+HDA NP+ E G P+LTCDVWEHAYYIDYRN R Y+ A+W ++NW++A+S
Sbjct: 70 QIWNHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINWDFANS 190
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.800e-53 Identity = 76/120 (63.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYAS 360
+V+NH YW SLSP+GGGEPTG + EAIE+ FG+F FK F+ A GHFGSGWAWL+ TE +DVV +HDA NPV E G P+LTCDVWEHAYYIDYRN R Y+ A+W LVNW++A+
Sbjct: 71 QVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFAN 190
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT) HSP 1 Score: 172 bits (435), Expect = 2.780e-52 Identity = 75/122 (61.48%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASSE 366
+V+NH YWNSLSPNGGGEPTG + +AI+ +FG+F+DFK+ F+ AA+GHF SGWAW++ + D LD+VD HDA NP++ P+LTCDVWEHAYYIDYRN R DY+ A+W LVNW++A+S+
Sbjct: 71 QVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFKEQFSKAASGHFASGWAWVVTSGD-GLDIVDLHDAGNPLTMG-KTPVLTCDVWEHAYYIDYRNARPDYIAAWWNLVNWDHANSQ 190
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: W7T7U7_9STRA (Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7U7_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.520e-52 Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASS 363
+V+NH YWNS++PN GG P+G + + I AFG+F +FK F++AA GHFGSGWAWL+L +D L+VV +HDA NP+ E G PLLTCDVWEHAYY+DYRN R YV+A+W LVNWE+A++
Sbjct: 72 QVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVL-KDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANA 191
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: A0A2N5Y3R4_9GAMM (Superoxide dismutase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y3R4_9GAMM) HSP 1 Score: 170 bits (430), Expect = 1.700e-51 Identity = 72/120 (60.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYAS 360
+V+NH YW+ +SP+GGGEPTGD+ AI+DAFG+FADFK FT +A +FGSGW WL+ T D T+ +V++ +AENP+++ PLLT DVWEHAYYIDYRN R Y+DAFW LVNWE+ +
Sbjct: 70 QVWNHTFYWHCMSPDGGGEPTGDVAAAIDDAFGSFADFKQAFTDSAVSNFGSGWTWLVKTNDGTVTIVNTSNAENPLTDSTVTPLLTVDVWEHAYYIDYRNARPKYMDAFWALVNWEFVN 189
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: A0A835ZFU3_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU3_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.890e-51 Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 4 VYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYAS 360
V+NH+ YW+SLSP GGG PTG + +AI+++FG F FK F +AA GHFGSGWAWL+ +D +L VV +HDA NPV E G P++TCDVWEHAYYIDYRN R Y+ A+W LVNW++A+
Sbjct: 76 VFNHDFYWHSLSPEGGGTPTGPIADAIKESFGDFDKFKAAFDAAAGGHFGSGWAWLVKADDGSLKVVSTHDASNPVVEKLGKPIITCDVWEHAYYIDYRNARPSYLAAWWNLVNWDFAN 194
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: A0A411HH13_9GAMM (Superoxide dismutase n=1 Tax=Pseudolysobacter antarcticus TaxID=2511995 RepID=A0A411HH13_9GAMM) HSP 1 Score: 169 bits (427), Expect = 4.700e-51 Identity = 75/121 (61.98%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYASS 363
+++NH YW+SLSPNGGGEPTG L +AI AFG+FA+FKD FT AA G FGSGWAWL+ D +L +V + +A P++ PLLTCDVWEHAYYIDYRN R Y++AFW LVNWE+A+S
Sbjct: 70 QIWNHTFYWHSLSPNGGGEPTGKLADAISKAFGSFAEFKDQFTKAAVGTFGSGWAWLVQRADGSLGIVSTSNAATPITGP-DTPLLTCDVWEHAYYIDYRNARPKYLEAFWNLVNWEFAAS 189
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Match: L1LGM5_THEEQ (Superoxide dismutase n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L1LGM5_THEEQ) HSP 1 Score: 168 bits (426), Expect = 8.010e-51 Identity = 70/120 (58.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 1 KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDLTLDVVDSHDAENPVSEDFGFPLLTCDVWEHAYYIDYRNLRADYVDAFWELVNWEYAS 360
+V+NH YWNS+ PN GGEP G + + IED FG+F FK+ F+S GHFGSGW WL+L +D T D+V +HDA +P+ ++ G PLL CDVWEHAYYIDYRN RA Y++A+W LVNW++A+
Sbjct: 70 QVWNHAFYWNSMGPNCGGEPVGTIRKLIEDKFGSFGKFKEDFSSLLAGHFGSGWGWLVLKDDGTADIVQTHDAGSPLRDNLGKPLLVCDVWEHAYYIDYRNDRAAYINAWWNLVNWDFAN 189 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig915.20553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig915.20553.1 >prot_F-serratus_M_contig915.20553.1 ID=prot_F-serratus_M_contig915.20553.1|Name=mRNA_F-serratus_M_contig915.20553.1|organism=Fucus serratus male|type=polypeptide|length=122bp KVYNHNLYWNSLSPNGGGEPTGDLLEAIEDAFGTFADFKDYFTSAATGHFback to top mRNA from alignment at F-serratus_M_contig915:15045..15903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig915.20553.1 ID=mRNA_F-serratus_M_contig915.20553.1|Name=mRNA_F-serratus_M_contig915.20553.1|organism=Fucus serratus male|type=mRNA|length=859bp|location=Sequence derived from alignment at F-serratus_M_contig915:15045..15903- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig915:15045..15903- >mRNA_F-serratus_M_contig915.20553.1 ID=mRNA_F-serratus_M_contig915.20553.1|Name=mRNA_F-serratus_M_contig915.20553.1|organism=Fucus serratus male|type=CDS|length=732bp|location=Sequence derived from alignment at F-serratus_M_contig915:15045..15903- (Fucus serratus male)back to top |