mRNA_F-serratus_M_contig91.20528.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A6H5L6A2_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A2_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 1.410e-152 Identity = 241/422 (57.11%), Postives = 296/422 (70.14%), Query Frame = 2
Query: 98 MESPVTRRCRRRLVSLSMATSAALTLVSWASFIGD--VSAARRLATEPLVPIDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGLVL-EKPTPHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNA----KASSEARLAAEMEALERQNHLLKEALEGTDGA-IQLPYGYGDPFKELWEVGYGEEFDPVMTCVVDMAVQYCEVEGIKEQDPWCATLESCIATEFRGDECWPSSCPLLKEGCQLASFCLTPELIETYTELLQED--AGANEQYSGELEHFGSTWEGNTGVGMEQRGEAGVEEASGEQAGVPFPPFLGRRPAATHAG----VDRAGDER--ETVA 1315
M +P RR RRR+ AL LVS S +G SA+ LA EPL P+D ATL SN+RHWTTDYAVMFYAPWC HCKE+FMP+W+DV+ Q+A EDPRGKRKL++GKF+CEQ DT AA+FCQ++NL++YPTFMFFGAGKFHDHDP+SG+VL +PT HDSSAK+P+ A+VYHEV+ W KTMHFIS NRV+ R N+FG +A+SE RL AE+EALER+NH L++A+ G + LPYG+GDP+ ELW+V Y EF+PVM+CV+DMA+QYC+VEG+KE DPWC TLESCIATEF GDECWPSSCP + GCQ+ SFCLTPE+ + Y +L+ E A A E+ +GE G+ W A A PPF GR PA + G VDR DER E VA
Sbjct: 1 MANPSIRRYRRRVFPAPSVAVTALLLVS-GSLLGSCPTSASTSLA-EPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLGKFNCEQ-DTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVFGSRGGRKDRAASEERLLAEIEALERKNHQLQQAMTGGEAQESSLPYGHGDPYNELWKVAYDAEFEPVMSCVIDMAMQYCDVEGVKESDPWCRTLESCIATEFVGDECWPSSCPFQEGGCQITSFCLTPEVFDAYMQLIDEHGAAAAAEEEAGE--GVGAGWAEXXXXXXXXXXXXXXXXA----AAPGLPPFFGR-PAGSQGGGGVGVDRKSDERGGEAVA 412
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: D7FNN2_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN2_ECTSI) HSP 1 Score: 315 bits (806), Expect = 1.500e-99 Identity = 160/259 (61.78%), Postives = 199/259 (76.83%), Query Frame = 2
Query: 98 MESPVTRRCRRRLVSLSMATSAALTLVSWASFIGD--VSAARRLATEPLVPIDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGLVL-EKPTPHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNA----KASSEARLAAEMEALERQNHLLKEALEGTDGA-IQLPYGYGDPFKELWEV 850
M +P RR RRRL A AL LVS S +G SA+ LA EPL P+D ATL SN+RHWTTDYAVMFYAPWC HCKE+FMP+W+DV+ Q+A EDPRGKRKL++ KF+CEQ DT AA+FCQ++NL++YPTFMFFGAGKFHDHDP+SG+VL +PT HDSSAK+P+ A+VYHEV+ W KTMHFIS NRV+ R N+FGG +A+SE RL AE+EALER+NH L++A+ G + LPYG+GDP+ ELW++
Sbjct: 1 MANPSIRRYRRRLSPAPSAAVTALLLVS-GSLLGSCPTSASTSLA-EPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLAKFNCEQ-DTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVFGGRGGRKDRAASEERLLAEIEALERKNHQLQQAMTGGETQESSLPYGHGDPYNELWKM 256
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: D7FNN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN1_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.640e-30 Identity = 81/184 (44.02%), Postives = 99/184 (53.80%), Query Frame = 2
Query: 878 MTCVVDMAVQYCEVEGIKEQDPWCATLESCIATEFRGDECWPSSCPLLKEGCQLASFCLTPELIETYTELLQEDA-GAN---EQYSGELEHFGSTWEGNTGVGMEQRGE---AGVEEASGEQAGVP-------------------------FPPFLGRRPAATHAG----VDRAGDER--ETVA 1315
M+CV+DMA+QYC+VEG+KE DPWC+TLESCIATEF GDECWPSSCP + GCQ+ SFCLTPE+ + +L E A GAN + + + + T E +T E+ GE AG EA E PPF GR PA + VDR DER E VA
Sbjct: 1 MSCVIDMAMQYCDVEGVKESDPWCSTLESCIATEFVGDECWPSSCPFQEGGCQITSFCLTPEMFDANERVLVEVAPGANPSGQTTTAQQAYMQLTDEHDTAATAEEAGEGGGAGWAEAGAETGTAXXXXXXXXXXXXXXXXXXXXXXXXXGLPPFFGR-PAGSQXXXXXXVDRKSDERGGEAVA 183
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A835YNV7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNV7_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.820e-29 Identity = 98/354 (27.68%), Postives = 144/354 (40.68%), Query Frame = 2
Query: 236 LVPIDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQ-QDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGLVL--EKPTPHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNAKASSEARLAAEMEALERQNHLLKEALEGTDGAIQLPYG--------------------------------------------------------YGDPFKE-LWEV----GYGEEFDPVMTCVVDMAVQYCEV---EGIKEQDPWCATLESCIATEFRGDECWPSSCPLLKEGCQLASFCLTPELIETYTELLQE 1096
LV + A L SN+ W D AVMFYAPWC HCK+ F+P W +A + A LVG+FDCE A FC D+ ++ YPTF FG G F D ++ L + T +D ++ + Y+ + WV+ M +S+ R +R G SS A +++ L N +L+ A+ A Y D +E L+ V GYG+ D ++ CV D A +YC+ G + WCATL++C+ F G C P+ CP GC + C +L Y + ++E
Sbjct: 33 LVELTAEDLQSNLEFWRQDIAVMFYAPWCPHCKK-FLPTWALIADDVKALYGTDDAAHLVGRFDCESLAHPDNAQFCSDIGIRSYPTFKVFGFGDFRDRSALASLAWWRRRDTTYDGVVEF--RGLRYYAALRDWVRAMFGVSALQRAQAR---VLGLLGLSSALDPAPQLQRLAADNRVLRGAVRQLAAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAADRYDDTLREDLFAVLAAGGYGD--DALLACVADRAAEYCDALEDAGQLSTEAWCATLDACLDAGFEGAACRPAVCPFADVGCTHVAQCARDDLRREYAKAVEE 378
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A7S2XXY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY5_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.260e-28 Identity = 100/398 (25.13%), Postives = 165/398 (41.46%), Query Frame = 2
Query: 149 MATSAALTLVSWASFIGDVSAARRLATEPLVP-IDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGLVLEKPTPHDSSAKYPST--AMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNAKA---------------------SSEARLAAEMEALERQNHL---------------------------------------------------------LKEALEGTDGA-IQLPYGYG-DPFKELWEVGYGEEFDPVMTCVVDMAVQYCEVEGIKEQDPWCATLESCIATEFRGDECWPSSCPLLK-EGCQLASFCLTPELIETYTELL 1090
M TS ++S F+ S+A +PLV + A + NI W +DY VMFYAPWC HC+++ P++++++ ++ D + +GKF+CE T FC +N+ YP MFFG G F P L+ + T + + +++ E + W KT R +SR + F N KA +++ L AE+ AL++ + L +++ L+ +GA I Y DPF L E GY +E + +CV DMA YCE +P+C ++ C+ F D+C P +CP + GC+L+ C ++++ Y + +
Sbjct: 1 MGTSLLFAILSTIFFVLQASSA---PADPLVQQLSANDIVDNIEVWNSDYMVMFYAPWCPHCRQL-SPLYEEISKEITKPD------MQLGKFNCEGSQTNL-QFCNALNVDRYPMIMFFGYGSF----PQGNLLKQALTKTQPALPQAISFDGLLFPEAIKDWAKTC-------RAVSRFHRFKDNVKALFSFNKLGQWQQAAALTNEALAAKEELQAELAALQQDHQLXXXXXXXXXXXXXXXGANAVPAAGSASSSWFGDLTTPQADGASPDLQQNNQQAIEEYVQQLLDNAEGAAIAEEYATAEDPFVVLKEAGYPDEMIALRSCVADMAATYCETVVDPSSEPFCESISLCVMEGFESDQCRPPTCPFVDPRGCELSKVCFQQDVLDEYAQFI 376
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A4T0CE66_AURPU (Thioredoxin-like protein n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4T0CE66_AURPU) HSP 1 Score: 68.9 bits (167), Expect = 2.020e-8 Identity = 36/103 (34.95%), Postives = 55/103 (53.40%), Query Frame = 2
Query: 239 VPIDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGL 547
VP+ A T + + + FYAPWC HC+ M P W +A + K KL VG+ +CE + C+DVN+K YPT ++F AG+ +++ + GL
Sbjct: 289 VPLTAETFQQRVTTTHDPWFIKFYAPWCHHCQAM-APSWHAMARDM-------KGKLNVGEVNCEVE----RRLCKDVNVKGYPTLIYFQAGERIEYEGLRGL 379
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A074XXA7_AURPU (Thioredoxin-like protein n=28 Tax=Aureobasidium TaxID=5579 RepID=A0A074XXA7_AURPU) HSP 1 Score: 68.9 bits (167), Expect = 2.250e-8 Identity = 36/103 (34.95%), Postives = 55/103 (53.40%), Query Frame = 2
Query: 239 VPIDAATLNSNIRHWTTDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGL 547
VP+ A T + + + FYAPWC HC+ M P W +A + K KL VG+ +CE + C+DVN+K YPT ++F AG+ +++ + GL
Sbjct: 289 VPLTAETFQQRVTTTHDPWFIKFYAPWCHHCQAM-APSWHAMARDM-------KGKLNVGEVNCEVE----RRLCKDVNVKGYPTLIYFQAGERIEYEGLRGL 379
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A3N4KGH0_9PEZI (Thioredoxin domain-containing protein n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4KGH0_9PEZI) HSP 1 Score: 63.9 bits (154), Expect = 5.350e-7 Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 2
Query: 299 VMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHDHDPVSGL 547
+ FYAPWC HC+ M P W ++ ++ K L +G+ +CE + C+DVNL+ YPT +FF G+ ++D + GL
Sbjct: 21 IKFYAPWCGHCQAM-APAWSELGREM-------KGSLNIGEVNCEVEKR----LCRDVNLRGYPTILFFQGGERVEYDGLRGL 91
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: A0A8D9BKJ5_9HEMI (Thioredoxin domain-containing protein 5 (Fragment) n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9BKJ5_9HEMI) HSP 1 Score: 61.2 bits (147), Expect = 6.920e-7 Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 2
Query: 290 DYAVMFYAPWCSHCKEMFMPMWQDVAAQLA-AEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGKFHD 526
+Y VMFYAPWC HCK + P+W+++A L +ED R + +G+ DC T C D ++ YPT FF G D
Sbjct: 49 NYFVMFYAPWCGHCKNLH-PIWEELADMLNDSEDSR----VTIGQVDC----TVEKQLCADQDITGYPTLKFFKKGSDTD 119
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Match: UPI001F5FD744 (thioredoxin domain-containing protein 5 homolog n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5FD744) HSP 1 Score: 63.2 bits (152), Expect = 7.690e-7 Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 2
Query: 287 TDYAVMFYAPWCSHCKEMFMPMWQDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCQDVNLKYYPTFMFFGAGK 517
T++ VMFYAPWC HCK + P W +A + +D G L +GK DC ++ + C + ++ YPT FF AG+
Sbjct: 49 TNHFVMFYAPWCGHCKNL-APTWDQLAEKYHKDDNSG---LTIGKVDCVKE----TALCSEQDVTGYPTLKFFKAGE 117 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20528.1 >prot_F-serratus_M_contig91.20528.1 ID=prot_F-serratus_M_contig91.20528.1|Name=mRNA_F-serratus_M_contig91.20528.1|organism=Fucus serratus male|type=polypeptide|length=415bp MPMKKNEMESPVTRRCRRRLVSLSMATSAALTLVSWASFIGDVSAARRLAback to top mRNA from alignment at F-serratus_M_contig91:812447..823740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig91.20528.1 ID=mRNA_F-serratus_M_contig91.20528.1|Name=mRNA_F-serratus_M_contig91.20528.1|organism=Fucus serratus male|type=mRNA|length=11294bp|location=Sequence derived from alignment at F-serratus_M_contig91:812447..823740+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig91:812447..823740+ >mRNA_F-serratus_M_contig91.20528.1 ID=mRNA_F-serratus_M_contig91.20528.1|Name=mRNA_F-serratus_M_contig91.20528.1|organism=Fucus serratus male|type=CDS|length=2490bp|location=Sequence derived from alignment at F-serratus_M_contig91:812447..823740+ (Fucus serratus male)back to top |