mRNA_F-serratus_M_contig91.20522.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig91.20522.1
Unique NamemRNA_F-serratus_M_contig91.20522.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A835WTE2_9CHLO (ApaG domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WTE2_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 5.400e-20
Identity = 90/306 (29.41%), Postives = 136/306 (44.44%), Query Frame = 2 
Query:   23 MSKRLVLVTYRSLLKEA-RDISRGEPLAIQALPFLAGGPQVVSTRTSHY--NTLEAVLPPSAIPYARALPFTDLVGAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSP 931
            MS++ V+  YR+L+++A R   RGE L I+       G    S     Y  N L  +L PS +   R  P  +    + G  +   V+  FRA A E  P+ +  LV +    +R + +Q+ +    S AVT GVRV A S+                    T S T          A +G         +++F YR+R+ N+ E+ I +LGREW I N+ G++   +      +  VVG QPI+ P D F Y SGTD+ + +G   G  E+A        +M+         + A VAPF  + P
Sbjct:    1 MSRKAVVSVYRTLMRQASRMKKRGEELEIRKPVSDQWGNYGYSETGLVYQGNALAQMLGPSGVSVLRHFPGAEK---LDGTSLQRTVRDNFRAHA-EAAPEHVPRLVGQALTCLRGLLEQQYLHRCSSSAVTDGVRVDATSKF-------------------TTSGT----------AYTG-------RHQNLFSYRIRVTNLREEPIQLLGREWTIKNDRGTIVVNVPHIPGNA--VVGQQPIIPPNDCFEYVSGTDLDTPAGLQSGKLEIA--------VMDKSTGRRGRTFMAEVAPFAHMRP 256
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BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A2P6TC08_CHLSO (ApaG domain-containing protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC08_CHLSO)

HSP 1 Score: 94.7 bits (234), Expect = 2.740e-18
Identity = 86/313 (27.48%), Postives = 139/313 (44.41%), Query Frame = 2 
Query:   23 MSKRLVLVTYRSLLKEARDISRGEPLAIQALPFLA--------GGPQV--VSTRTSHYNTLEAVLPPSAIPYARALPFTDLVGAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSP 931
            MS + V   YR  L++AR + R     ++ LP  A        GGPQ      R   Y      L P A   A +       G ++   +  +V+  FRA   E   +  Q  +++ F ++R +  Q ++ +  S   T GV V  ++  +         G+  E     D                G P      ++  + YR+R+ N+G +T+ +LGR W I +  G +  E+ +G   SR VVG  P+++PGD F YYSGTD+++  G M GSF++A   +   +  +A+ +   D   A VAPF  + P
Sbjct:    1 MSSKTVRTLYRLFLRQARALERQ---GLEELPIRAPVNREAWMGGPQHEWAPPRDEFYLQSFKRLVPWAAQDATS-------GVLTPAHLRELVRRTFRAPPPEEGGRARQ--LDQAFESLRLLADQVALDEATSSCTTDGVHVEVSTAHM---------GSQAELDPLYDDED------------DGSP------KKHYWTYRIRVSNLGSETVQLLGRHWLISDPSGKIVTEVPKG---SRGVVGCTPLIKPGDCFQYYSGTDLETPGGSMRGSFQMA---VVDPKKPHAQWLRTFD---AEVAPFPFIMP 265
[Close]
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A8J9WNJ9_9CHLO (Probable protein ApaG at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNJ9_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 2.020e-17
Identity = 80/271 (29.52%), Postives = 126/271 (46.49%), Query Frame = 2 
Query:   32 RLVLVTYRSLLKEARDISRGEPLAIQALPFLAGGPQVV----STRTSHYNTLEAVLPPSAIPYARALPFTDLVGAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEW-QDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEV 829
            +  LV YR+ LK AR I          LP      Q+     S+ T  Y  L+AV     +P    LP     G+    ++   V+A F A +    P+RL  L++ GF A+R + +Q  ++   + A T GV V   +  +  + P       +++ + PT                           R ++ YRVRI+NVG+  + +LGR+W I   +G  H  + RG++    VVG  PIL+PG+ F YYS TD+ + +G M+GSF++
Sbjct:    6 KAALVLYRAALKAARKIDAAFGGLDVRLPLDTMAWQMAAHEWSSPTEEYR-LDAVH--QLLP---GLPQPPQSGSFRRGELKHCVRANFEASSAAP-PERLPELLDLGFDALRVLAEQYVLESCSAQATTNGVHVEITTACIGSKIP-------VDFIETPT--------------------------ARPVWTYRVRIENVGDRKVQLLGRQWLIRTSEGHQHAMVPRGSTG---VVGCTPILKPGECFQYYSATDLSTPNGTMKGSFQM 233
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BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A3M7KXZ6_AUXPR (ApaG domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KXZ6_AUXPR)

HSP 1 Score: 84.3 bits (207), Expect = 1.740e-15
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 2 
Query:  593 FQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSPTS 937
            + YRVR+ NVG +T+ +LGR W I +  G    E+ RGT   R V+G  PI++PG  F YYSGTD+  + G M GSF++A        +++ R  P L+ + A VAPF    P++
Sbjct:   79 YTYRVRVANVGTETVQLLGRHWIIQDSRGVTVTEVPRGT---RGVIGCTPIIKPGTCFQYYSGTDLDEAPGSMHGSFQMA--------VLDDRSQP-LESFDAEVAPFHFWPPST 181
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BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A7S2XD00_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XD00_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 4.930e-15
Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = 2 
Query:  239 GAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIF-NEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEV 829
            G + G D  +V +    A  +E N       + +GF   + I  Q ++    SV VT GVRV   S  + P PPS     + +W D                            ++S F YR+ ++NVG+  + ++GR WRI  N    LH EI +G   S  VVG +P +EPG+ F+Y SG D+ S SG++ GSF++
Sbjct:   83 GGLEGLDEGMVRRIIKHAFQEEGN-------LEDGFTLSKFISAQTALHKCTSVTVTNGVRVEGTSIPLSP-PPS----HNSDWGD----------------------------KKSAFCYRISVENVGDHMVVLIGRHWRIHDNGSNLLHMEIPKG---SPGVVGHRPSIEPGERFVYASGCDLPSRSGWIGGSFQM 237
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BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A7S4ETF8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETF8_CHRCT)

HSP 1 Score: 85.1 bits (209), Expect = 5.330e-15
Identity = 83/309 (26.86%), Postives = 130/309 (42.07%), Query Frame = 2 
Query:   26 SKRLVLVTYRSLLKEARDISRGEPLAIQALPFLA-----GGPQVVSTRTSHYNTLEAVLPPSAIPYARAL-----PFTDLVGAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQL 922
            ++   L  YR+LL   R     EPL I+    L+      G Q   T  SH   +  + P         L      + D  G +S E    +V A FR  A  +    +   +N+ F A+R + +Q ++  R +V  T                 +P +G  +  +   DS   +    + +                ++QYR+RI N G   + +LGREW I + DG +H  + +G   S  VVG QP+L PG SF Y SGT + + +G ++GSF++       A   +A E  +L  + A V P  L
Sbjct:    4 ARATTLALYRALLGPLRG---KEPLRIRLPVKLSKAQWLSGSQSDKTPPSHAQVIRQLFPVVQAEGDGELWGGPEMWGDDPGELSPERARAIVGAKFREPAASSGS--VATRLNDAFAALRALNEQAALGQRTAVTRT-----------------TPTEGICVCVEASCDSHGKKETTGQTLW---------------LYQYRIRIRNEGVSPVHLLGREWIIQSADGRVHAHVAKG---SPGVVGEQPLLLPGQSFEYASGTTLPTETGSIQGSFQMVVPRSAEARDKSAAESAQLFAFDASVGPLPL 272
[Close]
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A7S0RQF4_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RQF4_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 6.620e-14
Identity = 61/222 (27.48%), Postives = 94/222 (42.34%), Query Frame = 2 
Query:  272 VKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSPTS 937
            +++CF+  A E +       ++E F A+R + +QR +    S   T GVRV   S                                R  + ++G P+Q       +F YRVR+ N  +  I VLGR W I +  G++   I R       +VG +P++ PG +F Y+SGTD+    G   GS  ++   +H     N  + P      A +APF L  P S
Sbjct:   79 IRSCFKQHAGEQDLAAQAQRLDEAFAALRVLAEQRYLACCSSSCTTDGVRVDVTSGY-----------------------------HRKATHVNGQPVQ-------LFTYRVRVTNTRQQPIKVLGRSWTIMDRSGTI---ITRIPLAENAIVGQRPVIPPGSTFEYFSGTDLADPPGKQSGSLLIS---VHG----NGHDKPATMSITAEIAPFPLELPAS 254
[Close]
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A7S0XPF1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XPF1_HEMAN)

HSP 1 Score: 79.3 bits (194), Expect = 1.360e-13
Identity = 63/237 (26.58%), Postives = 106/237 (44.73%), Query Frame = 2 
Query:  218 LPF-TDLVGAMSGEDISIVVKACFRAGAKETNPQRLQALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLL 925
            LPF  D+   ++ + ++ + +  FR   K  N + +   +++ F A+RT+ +Q     R SV  T+G+ V   S                         TH     +                 ++F YR+ + N GEDT+ ++GREW+I + +G +   + +    S  V+G  P L PG+ F Y+SG DV +  G M+GSF++    ++ A       + E D   A VAPF L+
Sbjct:    6 LPFGEDVTNGLTRDQLTRLTREVFRT-RKVANEESVGVYLDQAFEALRTLSEQSRHLARSSVCSTRGLCVRVVS-------------------------THMASDSKARGT-------------NVFCYRITLHNQGEDTVKLMGREWKILDGNGQIASTVPK---HSPGVIGQHPELRPGECFEYHSGCDVHTREGTMKGSFQMR--VVNSASSTEENGI-EFD---AVVAPFALI 194
[Close]
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: A0A2A5DKD5_9PROT (Protein ApaG n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DKD5_9PROT)

HSP 1 Score: 75.9 bits (185), Expect = 4.970e-13
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 2 
Query:  590 IFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSPTSD 940
            ++ YRVRI+N+G+ T+ ++ R WRI + DG +      G      VVG QPIL PG++F Y SGT +++SSG M GS+E+        E+ N       D +   + PF L SP  +
Sbjct:   30 VWAYRVRIENLGDKTVQLVNRYWRITDADGRVQEVHGAG------VVGEQPILSPGEAFEYTSGTPLRTSSGIMVGSYEM--------ELENG------DSFDIAIPPFSLDSPNEN 126
[Close]
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Match: R1C183_EMIHU (ApaG domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C183_EMIHU)

HSP 1 Score: 78.2 bits (191), Expect = 9.690e-13
Identity = 61/205 (29.76%), Postives = 89/205 (43.41%), Query Frame = 2 
Query:  326 ALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMDGASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNVGEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIYYSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQLLSPTSD 940
            A ++EGF A+R +G Q ++  R SVA T G+ V A                         SS +R + +               A   +F YR+R+ N  ++ + +LGR W I N DGS+H E+ +  +    +VG  P+L PG +F Y SGT + S +G + G+     G  H  E              A V  F LLS  SD
Sbjct:  105 ASLDEGFAALRALGDQIALAQRTSVARTSGLCVEA-------------------------SSAYRGRAQ---------------AGLWVFSYRLRVRNESDEPVRLLGRHWMIRNADGSVHAEVPKWGAG---IVGQTPLLSPGAAFEYASGTSLSSPNGSIGGAIRAERGDGHTFE--------------AAVGCFPLLSSPSD 252
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835WTE2_9CHLO5.400e-2029.41ApaG domain-containing protein n=2 Tax=Chlamydomon... [more]
A0A2P6TC08_CHLSO2.740e-1827.48ApaG domain-containing protein n=1 Tax=Chlorella s... [more]
A0A8J9WNJ9_9CHLO2.020e-1729.52Probable protein ApaG at C-terminar half n=1 Tax=C... [more]
A0A3M7KXZ6_AUXPR1.740e-1540.87ApaG domain-containing protein n=2 Tax=Auxenochlor... [more]
A0A7S2XD00_9EUKA4.930e-1531.82Hypothetical protein n=2 Tax=Lotharella TaxID=7481... [more]
A0A7S4ETF8_CHRCT5.330e-1526.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0RQF4_9CHLO6.620e-1427.48Hypothetical protein n=2 Tax=Chlamydomonas leiostr... [more]
A0A7S0XPF1_HEMAN1.360e-1326.58Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A2A5DKD5_9PROT4.970e-1337.61Protein ApaG n=1 Tax=Rhodospirillaceae bacterium T... [more]
R1C183_EMIHU9.690e-1329.76ApaG domain-containing protein n=2 Tax=Emiliania h... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig91contigF-serratus_M_contig91:735292..740847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score89.7
Seed ortholog evalue2.5e-15
Seed eggNOG ortholog3055.EDP02183
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ApaG domain
EggNOG OGs34N6A@3041,381G8@33090,COG2967@1,KOG4408@2759
COG Functional cat.P
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons6
Model size1247
Cds size921
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig91.20522.1prot_F-serratus_M_contig91.20522.1Fucus serratus malepolypeptideF-serratus_M_contig91 735314..740543 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932649.7480772-UTR-F-serratus_M_contig91:735291..7353131622932649.7480772-UTR-F-serratus_M_contig91:735291..735313Fucus serratus maleUTRF-serratus_M_contig91 735292..735313 +
1690964404.123873-UTR-F-serratus_M_contig91:735291..7353131690964404.123873-UTR-F-serratus_M_contig91:735291..735313Fucus serratus maleUTRF-serratus_M_contig91 735292..735313 +
1622932649.9426658-UTR-F-serratus_M_contig91:740543..7408471622932649.9426658-UTR-F-serratus_M_contig91:740543..740847Fucus serratus maleUTRF-serratus_M_contig91 740544..740847 +
1690964404.1965516-UTR-F-serratus_M_contig91:740543..7408471690964404.1965516-UTR-F-serratus_M_contig91:740543..740847Fucus serratus maleUTRF-serratus_M_contig91 740544..740847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932649.803091-CDS-F-serratus_M_contig91:735313..7353751622932649.803091-CDS-F-serratus_M_contig91:735313..735375Fucus serratus maleCDSF-serratus_M_contig91 735314..735375 +
1690964404.1354723-CDS-F-serratus_M_contig91:735313..7353751690964404.1354723-CDS-F-serratus_M_contig91:735313..735375Fucus serratus maleCDSF-serratus_M_contig91 735314..735375 +
1622932649.8259904-CDS-F-serratus_M_contig91:738386..7386591622932649.8259904-CDS-F-serratus_M_contig91:738386..738659Fucus serratus maleCDSF-serratus_M_contig91 738387..738659 +
1690964404.1438951-CDS-F-serratus_M_contig91:738386..7386591690964404.1438951-CDS-F-serratus_M_contig91:738386..738659Fucus serratus maleCDSF-serratus_M_contig91 738387..738659 +
1622932649.8445437-CDS-F-serratus_M_contig91:739028..7392021622932649.8445437-CDS-F-serratus_M_contig91:739028..739202Fucus serratus maleCDSF-serratus_M_contig91 739029..739202 +
1690964404.1531236-CDS-F-serratus_M_contig91:739028..7392021690964404.1531236-CDS-F-serratus_M_contig91:739028..739202Fucus serratus maleCDSF-serratus_M_contig91 739029..739202 +
1622932649.8709748-CDS-F-serratus_M_contig91:739649..7397271622932649.8709748-CDS-F-serratus_M_contig91:739649..739727Fucus serratus maleCDSF-serratus_M_contig91 739650..739727 +
1690964404.1662738-CDS-F-serratus_M_contig91:739649..7397271690964404.1662738-CDS-F-serratus_M_contig91:739649..739727Fucus serratus maleCDSF-serratus_M_contig91 739650..739727 +
1622932649.8885422-CDS-F-serratus_M_contig91:740064..7402811622932649.8885422-CDS-F-serratus_M_contig91:740064..740281Fucus serratus maleCDSF-serratus_M_contig91 740065..740281 +
1690964404.179632-CDS-F-serratus_M_contig91:740064..7402811690964404.179632-CDS-F-serratus_M_contig91:740064..740281Fucus serratus maleCDSF-serratus_M_contig91 740065..740281 +
1622932649.921689-CDS-F-serratus_M_contig91:740426..7405431622932649.921689-CDS-F-serratus_M_contig91:740426..740543Fucus serratus maleCDSF-serratus_M_contig91 740427..740543 +
1690964404.1879203-CDS-F-serratus_M_contig91:740426..7405431690964404.1879203-CDS-F-serratus_M_contig91:740426..740543Fucus serratus maleCDSF-serratus_M_contig91 740427..740543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig91.20522.1

>prot_F-serratus_M_contig91.20522.1 ID=prot_F-serratus_M_contig91.20522.1|Name=mRNA_F-serratus_M_contig91.20522.1|organism=Fucus serratus male|type=polypeptide|length=307bp
MSKRLVLVTYRSLLKEARDISRGEPLAIQALPFLAGGPQVVSTRTSHYNT
LEAVLPPSAIPYARALPFTDLVGAMSGEDISIVVKACFRAGAKETNPQRL
QALVNEGFLAIRTIGQQRSVQDRISVAVTKGVRVTAASQLVHPEPPSPMD
GASIEWQDPTDSSTHRVQLRRMMSALSGGPLQNERAERSIFQYRVRIDNV
GEDTITVLGREWRIFNEDGSLHREIRRGTSESRMVVGLQPILEPGDSFIY
YSGTDVKSSSGFMEGSFEVASGAIHYAEMMNAREVPELDVYYARVAPFQL
LSPTSD*
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mRNA from alignment at F-serratus_M_contig91:735292..740847+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig91.20522.1 ID=mRNA_F-serratus_M_contig91.20522.1|Name=mRNA_F-serratus_M_contig91.20522.1|organism=Fucus serratus male|type=mRNA|length=5556bp|location=Sequence derived from alignment at F-serratus_M_contig91:735292..740847+ (Fucus serratus male)
GACTGCACACCTTCTCGATACAATGAGCAAACGTCTGGTATTAGTTACTT
ATAGATCGCTACTGAAGGAGGCAAGGGATATAAGGTACGCTCTATTCACT
CTGCGCCGCAATGAGGTGCCACGTACCGGCCCACATTCATAACTTGTACC
AGAACCACGCGAAGACATCCTTTACGTTGTTCTCAGTGTTCGAAGTAAGC
CCTTAGAAGTGAGCCCTTAGACACCATAAGCGTCCCATGTGGACCACTTG
CACGTAACAAGATGTTATTCCGCGGTGGGAAGTAACCATATTTGAGCCCC
ATGTTCGTACGTCGCGCATGAACCCCGCGCCATACTTCGGTACTGCTTCA
ATGGGCTCGAACTTTGGCTTTGTGACGCATCGGTTCCATGGACCTATAAC
GGCTGACTACCGTCCTAGAAACGCCATACATTATTTCTAACTGCTGTGGG
AGCTAGAACCACTGCGGAAATGTTGTGTTACACTCTGTGTTGTACTTTAC
GATGACTAATCACTGGACGGGGCTATTAAGAGATCACCGTATATACTGCT
GTATGTCTATCGCCCACCGTACCAATTGTGGATGTGGGAAAAAGACAGAC
GCGCAAAAGTTGGTACATGTATGTGTTTTCTGTGTGTGTTTTCTTCCCAT
CCATTCTGGACATCAATGGACGTACCAGCCGGGGTGACACAGGAGGAAGG
TCACACAGGATTTTTCATCGACCTTCCTTCTGCGGTGCGTGCCTTAATTT
TTCTCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTC
GAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGTTGGGCATTTTT
ATTTAATTTTTTAGGTTTTTAGTGAGCAAAGTCCCGTTTGCCGGGTTCGA
ACTCACGTCCCAACGTGTCAGAGGGTTACGAGGTACCTCTGAGCTACCGG
GGCGACCGGCAATGGTCATATAAAAAGAGTATATATCAAGGGCCATATAT
CAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGTTGAACAAGGAAAA
TGGATATTTCCATGTCTCCGTTCGCGCCTGAGAATATTGTCTTGCGAGAC
GAGCTCGTCCAGCTTGCTCGTTCTCCACACTCCGGCTGAATATGGTTCTT
ACTCGCGGGAGTCCTCTCGATTTCCGCGGCGTCGTCCATTTATTTATACC
ACCATACGCCATTGGGTCAGTCCCGAGTTTATCGGGTCTCGCAAATGCGT
ACCGATGGCGTCCACTGGCGAGAGTCCGCCGGCAAAGGACCAGTAGTTCT
CAAGGTAGTTCCAGTATTAGTAACGGGTGCTGCCTTTGCAGGTATCACCA
CGGACCAATTAACGTGCGCCTCTATTTTCCCACATGGGGTGTCCTGAATA
GGCAGCACCCTCTACTCAAGCTACCGTGAACGCCGTCGATACGCCATCGC
GTGGCCTGATAAACCCGAGGCGGACCCAGTGGCGGTCGGCACTATAGATG
TATGCTGTCGCGGAAAGCGGGAGAAATCCTGCGAGTAACCAGATTCATCC
CGAGTATAAAGAACGAGCGAGCTGACGCGGAACGGGACGGCCCAACTCGT
CTTGCTATTATAGACCAAATTCTCAGGCGCGAACGGGGACAGGAAAAAAA
CATAATTTTTCTTTTCAGCTGACCACGCGCAGGGTTGGCAACCATACCCG
GTCAATCCATACTCTTGTGTGTCAAATATACAGCAAATAGAGAACAATGC
ATGTATGGTCAGCTCATTCAGCAGAGTATGGATCAACCGAGTAGGGTTGC
CAATTCTGCTCGTGGTCAGCTTACTTTAGCAGTTTTTTAACCGGGTAGGG
TTGACAATTCTGCTCGTGGTCAGCTTACTGTAGCAgttTTTTTTTTTTCC
TGTCCGCGCCTGAGAATTTGGTCTCGTGAAACGGTTTAGGCCGTCCCGCC
CCGCGTCAGCCCGCTCATCCTCCATACTCAGCCTGAATCTGGTGCTTACC
CACACTATTCCTCCCGCTTTTTCGCAATGGCGTCTACACATGCCATCAAA
CCGCCATCGGATCAGTACTGTGTTTATCGGGTCACGTCATTGCATACTGA
TGGCGTTTCCTGCCGAGAGTCCGCCAGCACAGGGCCAGTAATCCTTCAGG
TAGCTCCAGTAACGCGTACTGCCTTTTCAGTTTTCATCATGGACCAATTT
TCATACACATCTCTTTTCCCAAACCCACTGTTGGTGTCATGGAGAGACAC
AAAGCAACTTCCAAATGAAATTCGCATGCATTTACGGATTCAGCCTCTGT
ATGAAGAATGGGGGGCTGACGCGGGACGGGACGACCGAACCCGTCACGTG
AGACCAAATTATCACGAGCGAACTGGAACAGAGAAAATTCAAAGTTCGTA
TGTCCTGCTCAGCTGGCCCCAAGAAGGATTGACAACCATACCGGTTGATG
CCCAGTCTCCTGAACGTGATAGCCATACTTAAATCTATACTGTAAACTGG
CGTCGTAGCACTTCCCTGATACTGCTTCACTGCTGTTTACCTCGTTCGTC
TACGACTCGATCGGCTCGTGAAAAAGAAAGCGTGTGGGTTCGAGGGTTAT
ACAGTACCGTTCGTCAACGACAGTGAAGCGTACCGCAAGTCTAAAAAACA
TAATGTTCGCAAACCCTTAGTGAAATAATTCAATGTCCTGGAGCAACAGC
GGAGGTCTTGTAGTGTATTAATAGTTTCAAGGGAGAGCTGCGCCAGACAT
CACAATCATTTCCACACACCATCCAGAAAACTCATCAGAGAGGTACAGTA
GCAGAACATGTGCTGGTTGTGATTTCTAGATTGAACAGAGGATGGAAATG
CGACCCAGGCGACTGCTCCCTGCAGTGCCCTGCATGATATTCGCATCTTG
CGTTGCGGTACCGATAGCTTTGGCCCAATGCTGGAAAGGCGCTCGCCTTT
TAAAATCTGGGATAGATCGGTTAACATGATCCAACACGGGCTCGTGCCTC
GCCCACACGGAATTGCGTTTTCTATTTTATTTTGTGCATGATAGCCGCAG
TCCGTTCCTACGCCCGCCACCGTCGTCGCCGCGCTGAATTCGCAGCCGGG
GCGAGCCACTCGCAATTCAGGCTCTGCCTTTCTTAGCGGGGGGTCCACAG
GTCGTTTCCACCAGGACCTCGCACTACAATACACTTGAAGCCGTGCTACC
GCCGTCGGCGATACCCTACGCCCGCGCGTTGCCCTTCACCGACCTAGTCG
GTGCCATGAGCGGAGAAGACATCTCCATCGTGGTGAAGGCATGCTTCCGG
GCAGGGGCGAAGGAAACGAACCCCCAGCGATTACAAGCGCTCGTGAACGA
GGGCTTTTTGGCGATTCGGTGGGTGGGTGTCCATATATTTTCCGCGCCCT
TACTACGTCTGTGTCAATGCCATTGATCTCAGCTTTTTATCGCAATTTGA
GGCACCAGGTATGACTGTGGAAAGATCCTGCGAATTTTAGGTGTAACTTT
GTCAACTTTTGAATCTCTTGCTATCAAACATCCAAACGCTCTCCTGGAAT
ACCGAAACTACTGTATGGGTGCGAGAGTGCTCTGTCTCGTGCGATACGAT
GTTAAGCGTGTTTCCCCCTTCAAATAAAGTTCAATTTTCAAGGAAGTCGC
ATGTATACACCGATCGATCGCTTCTGTCCAAGTAATGGTAAATCGGCCGC
TACCCTTATCACGACATCTTCATAATATTACTTATAGGACTATCGGGCAA
CAGCGGAGTGTGCAGGATAGAATAAGCGTTGCCGTCACCAAGGGGGTGAG
AGTTACCGCAGCTAGCCAGCTGGTGCACCCGGAGCCTCCGTCGCCAATGG
ACGGTGCTTCTATCGAGTGGCAAGATCCAACAGATTCTTCCACACATCGC
GTGCAGTTGAGGTCCGTAGCGAGAGTCGGCTGACTCTTTTGTCGCGTTCC
TTAGCAAAGGTGTAATAAATTTAACGTTCCATCTGACCCTCTGATCTTCA
ACGTTCATGGGTTTAGCAGTCCTAAATTCGCTCCGGTAGTCAAGGTAAGG
TTGGCGCCATAGTGGCGTCGGCACGGCCCACAACAGAAAGAACTTTGGTT
TAGGTCAACTCTGAAGTTGGAGATGTTCTGAAGTTCTAGCCATATTTTTG
CCTCGAGAGCGGCCGAAGTGGACCGCCCGTTAATTTTGGCGGAAGGTGGA
GCTGCCCGGGCGCGTTCGCAACGTCCCATATTATTGCGCCATACGCTGCG
CGGTAGTTGTGCCCAAGTCTCGTCGCCGTGTCGCTCTCTTTTGCTGTAGA
CAACTTACCCTAAAGCTGATGTTGAGACTTGCACCATCGATTATCATCTC
TACTACAGACGCATGATGTCCGCATTATCTGGCGGCCCTCTACAAAACGA
GCGCGCGGAAAGATCGATATTCCAGTATCGCGTACGGTGAGGAAGGAAAG
TTACCGACGTACAAATATCAACAATCGACACGCAGGGCTCGGTTCGTCGA
ATCTGGACATCTCCACTCTATTCTTATAGTTATGTTCGCGGACGGTTCTG
CCGCGCGGGCCCGTCACATCGTAGCCAGCGCTCTCGCCCCTGATCACGTA
AGCGAAGAGGAAATCGCAGTTCGCGGTAGTGCGCAGCGGCAGAGCAAAGA
GTGCGAGGACGGCATAGCAGTGATAACATCGTCCAGACGGCCGTGTAGTT
CCCGGTGTCGAGTCTCATAGCTTGCGCAACTCTTGTCCGTAGTATCTAAG
ACGGCTCTATTTGTGTTGCACAGTATCGACAACGTCGGGGAGGACACGAT
AACTGTACTGGGCCGAGAGTGGAGAATATTCAACGAAGACGGCTCATTAC
ACCGCGAGATCAGGAGGGGGACCTCGGAATCGAGGATGGTGGTGGGGCTC
CAGCCAATCCTGGAGCCCGGCGACAGCTTCATCTACTACAGCGGAACGGA
CGTGAAGTCCAGCTCTGGCTTCATGGAGGGGTCGTTCGAGGTGCGGCCGT
ACCCGACAAGTCGACGGTTGGAACCAGACCACCATATCTCTCTTGGCATT
TAGCATCATTACTAACAAGCGAGTAATACTATGCGTGCACGATCCTGCGA
CTCAAGACTCATTTTCCGCGGCCGATTTCCTCCAGGTGGCGAGCGGGGCC
ATCCATTACGCGGAGATGATGAACGCCCGCGAAGTACCCGAGTTGGACGT
CTACTACGCCAGAGTAGCGCCATTTCAGTTGCTCAGTCCAACCTCGGACT
GATTTTTTTTTCAAGGCAAACTCTTGGGGACAACAGCTGCAGCGCAGATC
TAGCAATTGAGAGACCTCGTGAACCAATTTGGTGAACAGGGAAGTACGTG
GGCAGATATTCTTCGCGAGTACCGATTGATTCCACATATGCAGTAGCTCA
CCACAGGCATTCAAGTGTGACGGTATCCTTCTGTAAAATCCTATCACAAG
TCAATACGCATAGGTGTTGGCGAAATGGGTCTGAAAAAATGATCGTATCA
GTCTCTCAGAAACGTTCTGTGGCTGTGGCTTTCCTGAATTTTAAGACTTT
ACGCAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig91:735292..740847+

>mRNA_F-serratus_M_contig91.20522.1 ID=mRNA_F-serratus_M_contig91.20522.1|Name=mRNA_F-serratus_M_contig91.20522.1|organism=Fucus serratus male|type=CDS|length=1842bp|location=Sequence derived from alignment at F-serratus_M_contig91:735292..740847+ (Fucus serratus male)
ATGAGCAAACGTCTGGTATTAGTTACTTATAGATCGCTACTGAAGGAGGC
AAGGGATATAAGATGAGCAAACGTCTGGTATTAGTTACTTATAGATCGCT
ACTGAAGGAGGCAAGGGATATAAGCCGGGGCGAGCCACTCGCAATTCAGG
CTCTGCCTTTCTTAGCGGGGGGTCCACAGGTCGTTTCCACCAGGACCTCG
CACTACAATACACTTGAAGCCGTGCTACCGCCGTCGGCGATACCCTACGC
CCGCGCGTTGCCCTTCACCGACCTAGTCGGTGCCATGAGCGGAGAAGACA
TCTCCATCGTGGTGAAGGCATGCTTCCGGGCAGGGGCGAAGGAAACGAAC
CCCCAGCGATTACAAGCGCTCGTGAACGAGGGCTTTTTGGCGATTCGCCG
GGGCGAGCCACTCGCAATTCAGGCTCTGCCTTTCTTAGCGGGGGGTCCAC
AGGTCGTTTCCACCAGGACCTCGCACTACAATACACTTGAAGCCGTGCTA
CCGCCGTCGGCGATACCCTACGCCCGCGCGTTGCCCTTCACCGACCTAGT
CGGTGCCATGAGCGGAGAAGACATCTCCATCGTGGTGAAGGCATGCTTCC
GGGCAGGGGCGAAGGAAACGAACCCCCAGCGATTACAAGCGCTCGTGAAC
GAGGGCTTTTTGGCGATTCGGACTATCGGGCAACAGCGGAGTGTGCAGGA
TAGAATAAGCGTTGCCGTCACCAAGGGGGTGAGAGTTACCGCAGCTAGCC
AGCTGGTGCACCCGGAGCCTCCGTCGCCAATGGACGGTGCTTCTATCGAG
TGGCAAGATCCAACAGATTCTTCCACACATCGCGTGCAGTTGAGGACTAT
CGGGCAACAGCGGAGTGTGCAGGATAGAATAAGCGTTGCCGTCACCAAGG
GGGTGAGAGTTACCGCAGCTAGCCAGCTGGTGCACCCGGAGCCTCCGTCG
CCAATGGACGGTGCTTCTATCGAGTGGCAAGATCCAACAGATTCTTCCAC
ACATCGCGTGCAGTTGAGACGCATGATGTCCGCATTATCTGGCGGCCCTC
TACAAAACGAGCGCGCGGAAAGATCGATATTCCAGTATCGCGTACGACGC
ATGATGTCCGCATTATCTGGCGGCCCTCTACAAAACGAGCGCGCGGAAAG
ATCGATATTCCAGTATCGCGTACGTATCGACAACGTCGGGGAGGACACGA
TAACTGTACTGGGCCGAGAGTGGAGAATATTCAACGAAGACGGCTCATTA
CACCGCGAGATCAGGAGGGGGACCTCGGAATCGAGGATGGTGGTGGGGCT
CCAGCCAATCCTGGAGCCCGGCGACAGCTTCATCTACTACAGCGGAACGG
ACGTGAAGTCCAGCTCTGGCTTCATGGAGGGGTCGTTCGAGTATCGACAA
CGTCGGGGAGGACACGATAACTGTACTGGGCCGAGAGTGGAGAATATTCA
ACGAAGACGGCTCATTACACCGCGAGATCAGGAGGGGGACCTCGGAATCG
AGGATGGTGGTGGGGCTCCAGCCAATCCTGGAGCCCGGCGACAGCTTCAT
CTACTACAGCGGAACGGACGTGAAGTCCAGCTCTGGCTTCATGGAGGGGT
CGTTCGAGGTGGCGAGCGGGGCCATCCATTACGCGGAGATGATGAACGCC
CGCGAAGTACCCGAGTTGGACGTCTACTACGCCAGAGTAGCGCCATTTCA
GTTGCTCAGTCCAACCTCGGACTGAGTGGCGAGCGGGGCCATCCATTACG
CGGAGATGATGAACGCCCGCGAAGTACCCGAGTTGGACGTCTACTACGCC
AGAGTAGCGCCATTTCAGTTGCTCAGTCCAACCTCGGACTGA
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