mRNA_F-serratus_M_contig91.20520.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: D7FNN9_ECTSI (Phorbol-ester/DAG-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN9_ECTSI) HSP 1 Score: 343 bits (881), Expect = 1.070e-97 Identity = 304/735 (41.36%), Postives = 370/735 (50.34%), Query Frame = 2
Query: 329 ADPLEGLSESERLSLAIRFG-------GIRMCAALTHGHSFESSIFRLPSKCLACQELVWGPFTRGCVCLVCKLTAHRSCTGSTTMPKCPTKDLFADFCRLELGIRRPGPAAPSLDV------------QEAVLVAAPVRKMSSAASAHAEQDRVNSGDMEGWATVEETTANDSIERNTRRRE------------------STFSWSPFGSSDRKRPLSSNANNNTNERQQPKLQLEAGEHA-ENIAVGGDKDATNVEKKPSVVSPHPDGVDGFSGHQSLTVSQNKEVPGADPATASAQTNPKASVGIRDVGKMSVAGGVVGAVLXXXXXXXXXXXXXXXXXAGRWSVQGLWQRIDEDRQAAGAAAGLAVSSKSSDGDGSTTVKEGAVEAGTQGSRDIWALIAYQVQEEEQPSSWELDPEQRALLEHGECDTGEVATFVVSKLLADDTTMPSRLYKALLDEFRSRH----------------RLCICRRTV--KRRSGIADMVALFPRVGGGRRTHREAMGSGDGGGGGEINSVLKEDGTILSTSTLGLEKTFSFVEETEIVEGEESDAASGDFMENGYGSGVEEIDVGEGERSG--------LEPREEPVVSASTPKKSVEATARFP-TAARRVAV------SAIMSREASRNRSCRLDSWVRLEGSACVNCGSRTADVSPHAQMTVGSFGR--------DVEDVRGGLGDSWTTTEASSCSCADEEGLSASPE 2296
+DPL GLSESERL+L IRFG G MCAA++HGHSF+SSIFRLP+KC AC ELVWGPFTRGC CL C +T HRSCTG+ ++P+CPTKD+F FCR ELG+ E R +S A GD++ WATV+ T+A+ + + S+FSWSP G +RKRP S + + AG+ A E GD T VS G G SG T + ++ A ++AS+ T AS+GIR V K+SVAGGVVGA+ XXXXXXXXXXXXXXXXXAGR QGLWQRI++ R+ AGA G+ + K +DG + V E E + RD+WA IA +V+ E QP+ WEL PEQ LLE GEC+ GE+A FVV K+LAD+T M L+ ALL EFRSRH R V +RRS DMVALFPR ST GLEKTFSFVEE EIV GE SD D G+R G +PV S + S ATA TA RR +V +A+ SR++ R+ S R+DSWV+LEG C NCG R A H+ G G DVE+ GGLGD W EA C C DE GLSASPE
Sbjct: 31 SDPLAGLSESERLALLIRFGAAAAGPKGGGMCAAMSHGHSFQSSIFRLPAKCSACHELVWGPFTRGCTCLTCSVTVHRSCTGAASLPRCPTKDVFDAFCRSELGLPPXXXXXXXXXXXXXXXXXXXXTGSEQGAETPGGRSPASCGGAGGGGAAHTGGDLDEWATVDGTSAHSNSAAVGQXXXXXXXXXXXXASCALQDLGSSFSWSPLGLGERKRPTSPVVSEXXXXXXXXXXXVPAGDAAAETRTAPGDAGDT--------VSAL--GNQGASGAVPTTAT---DLAVAADSSASSTT---ASMGIRGVTKLSVAGGVVGALFXXXXXXXXXXXXXXXXXAGRSVQQGLWQRIEKSRREAGAE-GIRLP-KGADGSTAAAVVE---ETAARKPRDLWARIAGKVESEHQPTIWELAPEQEKLLEQGECNAGEMAMFVVGKVLADETAMLFHLHAALLAEFRSRHDSSRSGXXXXXXXXXXXXXXXTRPVPIRRRSSDTDMVALFPRSXXXXXXXXXXXXX-------XXXXXXXXXXXXFFASTPGLEKTFSFVEEAEIVAGEGSDTPGSDDXXXXXXXXXXXXXERSGDRRGRRLPTATRAHRWSKPVRSEAAGLASAPATAAVAVTAGRRSSVGAAASAAAVASRDSWRSNSSRMDSWVQLEGGVCGNCGGRVA--GRHSANGGGGSGSRSTRALVGDVEEDEGGLGDGWAAAEAPVCWCRDEGGLSASPE 735
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A7S2M9W4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M9W4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 5.760e-11 Identity = 59/214 (27.57%), Postives = 96/214 (44.86%), Query Frame = 1
Query: 2566 DVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLVRRDEYSRREAGRPS--LAATCDTEALAALRSAGAARTGRDKLEFLVQAVERVSESLPAK-----ATTDMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVL 3186
+ H +++ +T +L P+L+SS + + + V+ + G Y +Y Q +E+D+ L+ VR ++ G S ++ A+AALR+ T +KL V +E +SE D LL +C+H+ A+ + HAEVAF+E+F RDE L GK+GY L T+ A+LH L
Sbjct: 19 NAHNIIKHVTATLLEVRPVLSSSSVMTELSADAVELLVFGELYSDIYEEFVQ-QTKEQDLNLSNKVRELCDHVKDGGVESGVESSAISQPAIAALRALPQVHTPAEKLNHCVGFLESISEHFSTLYQGKCIDADTLLVMVCQHVVASN---------------------------VDHLHAEVAFLEEFARDEQLLSGKEGYALITLQASLHYL 204
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A6U1A6V6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1A6V6_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 8.680e-10 Identity = 69/246 (28.05%), Postives = 108/246 (43.90%), Query Frame = 1
Query: 2509 NRDQRVFGAGGQETCDALRDVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLVRR---DEYSRREAGRPSLAATCDTE--------ALAALRSAGAARTGRDKLEFLVQAVERVSESLPAKATTDMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVLLDPAMSDEI 3213
+R+ AG + + D G+ EL AVL L+ D++ I +N VD+ +LG Y +++ V G+ R D L + + + S +G A+ D A L + ART DK+ LV+AVE + + P T D L+ +L R +A + + P H+EVAF ++ RD+ +GK+G+ LT+V AAL VL D +EI
Sbjct: 426 SREHSSSAAGLEPVASPILDAMGLAHELIAAVLHYHERLSQRDESIIATINAVDRVVLGEIYPTLFSDV-QGRFRSADTALREKLDHASAERVSDGGSGAEGSASGWDMSEFSQAQVTAAGTLAAVAKARTTLDKMRCLVRAVECTAAACPHAPTADDLVPALARTVALSMLLE-----------------------PSLAMHSEVAFTDELCRDDLLCLGKEGFALTSVTAALSVLADLPNDEEI 647
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A7S3XRE5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRE5_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 1.790e-8 Identity = 65/231 (28.14%), Postives = 96/231 (41.56%), Query Frame = 1
Query: 2554 DALRDVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLVRRDEYSRREAGRPSLAATCDTEALAA-LRSAGAARTGRDKLEFLVQAVERVSESLPAKATTDMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPH------------------AEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVLL 3189
DA+ D HG+ REL + + P L + I VN VD+ + G Y V+A++ + D+ A V+ E S P A TEA A L+ RT DKLE L+ A++ S +R + +N G +GG PL +E+ F+E+F RD+S L+GK GY LTT AA++++L
Sbjct: 165 DAVGDAHGLTRELVATMFTTHPFLQECTETIIATVNAVDRLVFGEIYWTVFAQIRIQNHYQDDLLNACTVKALE-SPTSISLPGFNA--GTEAAAKILKCVSERRTAFDKLEVLLDAIQSTELS-----------------------------SRPDQFLDKNGGNSMSGGEPLSADMLLPAITKVILTSGIQHLPSELKFMEEFSRDDSLLLGKYGYALTTFQAAVNIIL 363
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: B7FUU1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUU1_PHATC) HSP 1 Score: 68.6 bits (166), Expect = 5.870e-8 Identity = 58/210 (27.62%), Postives = 90/210 (42.86%), Query Frame = 1
Query: 2566 DVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLVRRDEYSRREAGRPSLAATCDTEALAALRSAGAARTGRDKLEFLVQAVERVSESLPAKAT---TDMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVL 3186
D H V++ +T +L P S + V+ + G Y V+ +A + E D L V E S + ++ +ALAAL + A + DKL + V+ +E +S D LL+ C+H+ A A LP+ +AEVAF+E+F RDE L G++GY L T+ A++H L
Sbjct: 544 DAHAVIKHVTATLLEVRPGFGHSRAITELTAAAVESLVFGKLYDSVFGEIAF-ETEEIDTKLLDRVAEFEASEHSINKELVS----EQALAALCTLPEAHSAVDKLHYGVKFLELLSSHFSESGNPICADSLLKMACQHILA---------------------------AKLPQMNAEVAFLEEFARDEQLLKGREGYALVTLQASMHFL 721
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A7S4EG19_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG19_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.970e-7 Identity = 60/221 (27.15%), Postives = 97/221 (43.89%), Query Frame = 1
Query: 2563 RDVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLV----RRD--EYSRREAGRPSLA--ATCDTEALAALRSAGAARTGRDKLEFLVQAVERVSESLPAKATT-----DMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVL 3186
RD H V++ +T ++L P S + + V+ + G Y V + + D+ L ++ R+D E S + G P + AL AL A + DKL + V +E++SE ATT D LL+ +C+H+ A ++ G N+ ++AF+E+F RDE L G++GY L T+ A+LH L
Sbjct: 816 RDTHAVIKYITTSLLLTRPGFGHSSSFTEKTATAVESLVFGEIYDLVTEEIELEYQNQDDLLLEKIANFERRQDQGEDSLKTPGNPCFGYKSYISEAALEALHCLPRAHSAVDKLRYCVVFLEQISEKFSNTATTSVMGADSLLKMVCQHILLA------------KVIGINS---------------QIAFLEEFARDEQLLRGREGYALVTLQASLHFL 1009
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A7S0FMN2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMN2_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.910e-6 Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 1
Query: 2830 ALAALRSAGAARTGRDKLEFLVQAVERVSESLPAKA------TTDMLLRSLCRHLAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVL 3186
AL AL S A++ DKLE V+ +E +S A + D LL+ +C H+ A +PR +AE+AF+E+F RDE L GK+GY L T+ A+LH L
Sbjct: 38 ALEALLSMSDAKSSVDKLENCVKFLEAISVHFDQAAGGGKAVSADYLLKMVCEHIIV---------------------------AKVPRLNAELAFLEEFARDEQLLRGKEGYSLVTLQASLHFL 135
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Match: A0A7S0XQ13_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XQ13_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.790e-5 Identity = 52/216 (24.07%), Postives = 89/216 (41.20%), Query Frame = 1
Query: 2563 RDVHGVLRELTLAVLSCCPILTSSDDASIQAVNCVDQQILGVTYGPVYARVASGQARERDITLAQLVRRD--EYSRREAGRPSLAATCDTEALAALRSAGAARTGRDKLEFLVQAVERVSESLPAKAT-----TDMLLRSLCRH-LAAATMGSGGTATRSAEMWGRNNGRGGTGGAPLPRPHAEVAFVEQFMRDESWLMGKQGYVLTTVDAALHVL 3186
RD H V++ +T ++L P S + + V+ + G Y V + + ++ L ++ D + R + + AL AL A + DKL + V +E++S+ D LL+ +C+H L A MG ++++AF+E+F RDE L G++GY L T+ A+LH L
Sbjct: 70 RDAHAVIKYVTTSLLLTRPGFGHSSSLTEKTATAVESLVFGEIYDLVMEEIELEHEAKDNLLLDKIADFDKKQNQREDPIDDGYKSFISEAALEALHCLPQAHSAVDKLRYCVVFLEQISDKFSKSKVKSAMGADSLLKMVCQHVLVAKVMGI----------------------------NSQIAFLEEFARDEQLLRGREGYALVTLQASLHFL 257 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20520.1 >prot_F-serratus_M_contig91.20520.1 ID=prot_F-serratus_M_contig91.20520.1|Name=mRNA_F-serratus_M_contig91.20520.1|organism=Fucus serratus male|type=polypeptide|length=782bp MARRPESDFSNAIVNPQADLPPSRQEEDAWDPAVIDVADPLEGLSESERLback to top mRNA from alignment at F-serratus_M_contig91:704748..708390- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig91.20520.1 ID=mRNA_F-serratus_M_contig91.20520.1|Name=mRNA_F-serratus_M_contig91.20520.1|organism=Fucus serratus male|type=mRNA|length=3643bp|location=Sequence derived from alignment at F-serratus_M_contig91:704748..708390- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig91:704748..708390- >mRNA_F-serratus_M_contig91.20520.1 ID=mRNA_F-serratus_M_contig91.20520.1|Name=mRNA_F-serratus_M_contig91.20520.1|organism=Fucus serratus male|type=CDS|length=4692bp|location=Sequence derived from alignment at F-serratus_M_contig91:704748..708390- (Fucus serratus male)back to top |