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Homology
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI) HSP 1 Score: 135 bits (341), Expect = 2.090e-35 Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 109 MDASSYTEVATSCFVIIKITFDRASTRTRSSKVSKRGK----------DQITKQSESQEESVVLPTSAAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLACKRSL 531
M+ASSYT A CF+ +++TF +TR + K KRGK Q + S + + V LPT AF+++IL+A+KD+HGE+GS+ VDVLSW+ + EG LR+ +RS+VP+RAAL+ +G CGD PCA+ V E SPFLAGLAC+R L
Sbjct: 1 MEASSYTLPAAFCFIAVQLTFQ--ATRQATPKRPKRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: UPI00112CF55E (ribonuclease P protein subunit p14 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112CF55E) HSP 1 Score: 62.4 bits (150), Expect = 2.320e-8 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 244 ESQEESVVLPTSAAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
E QEE V L +A F+ ILSAL+D+HGE+G+ DVL+++ LRIS+R +V + +ALTL+G + CA V + SPFL LA
Sbjct: 34 EFQEEGVRL-NAAHFKQLILSALRDLHGEVGA-ALLFDVLTFDEKSLSAILRISNRGLVKLWSALTLLGSYQNHKCAFRVLQISPFLLALA 122
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A7L1GNX7_9PICI (RPP14 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L1GNX7_9PICI) HSP 1 Score: 60.5 bits (145), Expect = 5.050e-8 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 262 VVLPTSAAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
V PT A F+ ++SAL+++HGE+G+ VDVL++ LR+ S V + +ALTL+G + CA V + SPFL LA
Sbjct: 6 VTRPTVAQFKQLVVSALRELHGEVGA-ALPVDVLTYEEKTLSAILRVISSGFVKLWSALTLLGFYQNRRCAFRVLQTSPFLLALA 89
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: UPI0018A220EF (ribonuclease P protein subunit p14 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI0018A220EF) HSP 1 Score: 60.5 bits (145), Expect = 1.110e-7 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 280 AAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
A F+ ILSALK++HGE+G+ VDVL++ LR+SS +V + +ALTL+G + CA V + SPFL L+
Sbjct: 45 AHFKQLILSALKELHGEVGA-ALPVDVLTYEEKTLSAILRVSSSGLVKLWSALTLLGSYQNRKCAFRVIQTSPFLLALS 122
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A401P2T2_SCYTO (Uncharacterized protein n=4 Tax=Galeoidea TaxID=119195 RepID=A0A401P2T2_SCYTO) HSP 1 Score: 60.1 bits (144), Expect = 1.410e-7 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 280 AAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
A F+ I+SALKD+HGE+G+ VDVL + LR+ S +V + +ALTL+G + CA VT+ SPFL L+
Sbjct: 42 AHFKQLIVSALKDLHGEIGA-ALPVDVLRFEGETLTSILRVKSNGLVKLWSALTLLGSYQNQKCAFRVTQVSPFLLALS 119
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: UPI001ABDDCD8 (ribonuclease P protein subunit p14-like isoform X2 n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDDCD8) HSP 1 Score: 60.5 bits (145), Expect = 2.030e-7 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 253 EESVVLPTSAAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
E+ +V ++A F+S+ILSALK++HGE+G+ +D+L ++ LRI S +V + +LTL+G C+V V + SPFL LA
Sbjct: 65 EDKIVKISAAQFKSFILSALKELHGEVGA-SIPLDLLKFDGQTLYAILRIKSSGLVKLWTSLTLLGQYQGHQCSVRVLQTSPFLLALA 151
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A6P7YEG8_9AMPH (ribonuclease P protein subunit p14 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7YEG8_9AMPH) HSP 1 Score: 59.7 bits (143), Expect = 2.070e-7 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 286 FESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
F+ ILSAL+D+HGE+G+ D+L+++ LRIS+R +V + +ALTL+G + CA V + SPFL LA
Sbjct: 47 FKQLILSALRDLHGEVGA-ALPFDILTFDEKSFSAILRISNRGLVKLWSALTLLGSYQNHKCAFRVLQTSPFLLALA 122
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A1U7RKE0_ALLSI (ribonuclease P protein subunit p14 n=1 Tax=Alligator sinensis TaxID=38654 RepID=A0A1U7RKE0_ALLSI) HSP 1 Score: 59.3 bits (142), Expect = 2.580e-7 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 280 AAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
A F+ I+SALK++HGE+G+ VDVL+++ LR+SS V + +ALTL+G + CA V + SPFL L+
Sbjct: 41 AHFKQLIVSALKELHGEVGA-ALPVDVLTYDEKTLSAILRVSSSGFVKLWSALTLLGSYQNRKCAFRVVQTSPFLLALS 118
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A151MKJ6_ALLMI (Ribonuclease P protein subunit p14 n=3 Tax=Crocodylia TaxID=1294634 RepID=A0A151MKJ6_ALLMI) HSP 1 Score: 58.9 bits (141), Expect = 4.020e-7 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 280 AAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
A F+ ++SALK++HGE+G+ VDVL+++ LR+SS V + +ALTL+G + CA V + SPFL L+
Sbjct: 47 AHFKQLVVSALKELHGEVGA-ALPVDVLTYDEKTLSAILRVSSSGFVKLWSALTLLGSYQNRKCAFRVVQTSPFLLALS 124
BLAST of mRNA_F-serratus_M_contig91.20509.1 vs. uniprot
Match: A0A674IF97_TERCA (Ribonuclease P/MRP subunit p14 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=A0A674IF97_TERCA) HSP 1 Score: 58.5 bits (140), Expect = 4.810e-7 Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 280 AAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISSRSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLA 516
A F+ ILSALK++HGE+G+ VDVL++ LR+ S +V + +ALTL+G + CA V + SPFL L+
Sbjct: 41 AHFKQLILSALKELHGEVGA-ALPVDVLTYEEKTLSAILRVPSSGLVKLWSALTLLGSYQNRKCAFRVIQTSPFLLALS 118
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Metazoa |
| Seed ortholog score | 60.8 |
| Seed ortholog evalue | 5.8e-07 |
| Seed eggNOG ortholog | 8469.XP_007066030.1 |
| Preferred name | RPP14 |
| KEGG ko | ko:K14529 |
| KEGG Pathway | ko03013,map03013 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0099116,GO:1901360,GO:1901363,GO:1902494,GO:1902555,GO:1905348,GO:1990904 |
| EggNOG free text desc. | ribonuclease P |
| EggNOG OGs | 2BCSB@1,2S10S@2759,3A3XP@33154,3BRFU@33208,3D7R7@33213,48EKZ@7711,49BQG@7742,4CI9Z@8459 |
| Ec32 ortholog description | Ribonuclease P/MRP protein subunit |
| Ec32 ortholog | Ec-08_006170.1 |
| EC | 3.1.26.5 |
| COG Functional cat. | S |
| Best tax level | Testudines |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03016 |
| Exons | 3 |
| Model size | 1087 |
| Cds size | 426 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622932646.917882-UTR-F-serratus_M_contig91:342442..342995 | 1622932646.917882-UTR-F-serratus_M_contig91:342442..342995 | Fucus serratus male | UTR | F-serratus_M_contig91 342443..342995 - |
| 1690964402.632928-UTR-F-serratus_M_contig91:342442..342995 | 1690964402.632928-UTR-F-serratus_M_contig91:342442..342995 | Fucus serratus male | UTR | F-serratus_M_contig91 342443..342995 - |
| 1622932646.9795678-UTR-F-serratus_M_contig91:354612..354720 | 1622932646.9795678-UTR-F-serratus_M_contig91:354612..354720 | Fucus serratus male | UTR | F-serratus_M_contig91 354613..354720 - |
| 1690964402.6789079-UTR-F-serratus_M_contig91:354612..354720 | 1690964402.6789079-UTR-F-serratus_M_contig91:354612..354720 | Fucus serratus male | UTR | F-serratus_M_contig91 354613..354720 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622932646.931607-CDS-F-serratus_M_contig91:342995..343119 | 1622932646.931607-CDS-F-serratus_M_contig91:342995..343119 | Fucus serratus male | CDS | F-serratus_M_contig91 342996..343119 - |
| 1690964402.6458592-CDS-F-serratus_M_contig91:342995..343119 | 1690964402.6458592-CDS-F-serratus_M_contig91:342995..343119 | Fucus serratus male | CDS | F-serratus_M_contig91 342996..343119 - |
| 1622932646.949049-CDS-F-serratus_M_contig91:354060..354306 | 1622932646.949049-CDS-F-serratus_M_contig91:354060..354306 | Fucus serratus male | CDS | F-serratus_M_contig91 354061..354306 - |
| 1690964402.65682-CDS-F-serratus_M_contig91:354060..354306 | 1690964402.65682-CDS-F-serratus_M_contig91:354060..354306 | Fucus serratus male | CDS | F-serratus_M_contig91 354061..354306 - |
| 1622932646.967249-CDS-F-serratus_M_contig91:354556..354612 | 1622932646.967249-CDS-F-serratus_M_contig91:354556..354612 | Fucus serratus male | CDS | F-serratus_M_contig91 354557..354612 - |
| 1690964402.6677132-CDS-F-serratus_M_contig91:354556..354612 | 1690964402.6677132-CDS-F-serratus_M_contig91:354556..354612 | Fucus serratus male | CDS | F-serratus_M_contig91 354557..354612 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20509.1 >prot_F-serratus_M_contig91.20509.1 ID=prot_F-serratus_M_contig91.20509.1|Name=mRNA_F-serratus_M_contig91.20509.1|organism=Fucus serratus male|type=polypeptide|length=142bp
MDASSYTEVATSCFVIIKITFDRASTRTRSSKVSKRGKDQITKQSESQEE
SVVLPTSAAFESWILSALKDIHGELGSIGQQVDVLSWNPMRAEGSLRISS
RSIVPVRAALTLIGVCGDTPCAVSVTEASPFLAGLACKRSL* back to topmRNA from alignment at F-serratus_M_contig91:342443..354720- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig91.20509.1 ID=mRNA_F-serratus_M_contig91.20509.1|Name=mRNA_F-serratus_M_contig91.20509.1|organism=Fucus serratus male|type=mRNA|length=12278bp|location=Sequence derived from alignment at F-serratus_M_contig91:342443..354720- (Fucus serratus male)
CTTTTCTTCACACGACGAAAGACTGATCAATCAAATCAAGCAGGAGACTA
TCATACTGCAACCGGGCCATACACGCACGAGAAAAGCTGAAGAAGCGGAT
CGACCGGCATGGATGCTTCGTCCTACACGGAAGTAGCCACCTCATGCTTT
GTGATAATCAAAATGTGAGCGTTCGAGGCGCAAGACGATTTCTGGAGTTC
ATTGAAGCTTTAGTTATACTGTGGTGCAACTGTAACTGACTGTTGTACTA
CTGCAGTATTCATAGTTGAGCCACAAATGTATGTACTCTCGTACAGTAGA
TCATCATCGACGAGTCATCAACCGCAACTTCTGCTGGTGATAACGATTTG
TTATCTCGAAGATCAACGAGCCGCACACGGTCTGATGCCTTCTCACATGG
CGATTATATCGCAGAACTTTTGACAGGGCAAGCACGAGAACACGGTCCTC
CAAAGTCTCCAAGCGAGGAAAAGATCAAATCACGAAGCAATCGGAAAGTC
AAGAAGAAAGCGTTGTCTTGCCTACATCGGCGGCCTTTGAGTCCTGGATC
CTCAGCGCCCTCAAAGACATACACGGCGAGCTGGGATCGATAGGCCAGCA
GGTTGATGTCCTTTCTTGGAACCCCATGAGGGCGGAGGGAAGCTTGCGGA
TATCTTCCAGGTACGAACTTGCAGCGAAGAGTTTTGTTGGGGCGACATTG
CCGCCAACGATCGAACCGTCCCCTTTGCACCCTGTATGTATGGTTATCAA
ATATAGTAAGAGTATAGATCAACCGAGTAAGGTTGGCAATCCTGCTGCTC
GTGGTCAGCTGAACAGCGAAAATCAATACTTTCCCTTTCCCCGTTCGCGC
CTGAGAATTTAGTCTCGGGAGACAGGTTCGACAGTCCCGTCCCGCGTCAG
CCTGCTCATTCTCCACACTCAGCTTGATTTTGGTGCTTGCACGAAGTGTG
TGTGTTTTCTTCCCATCCATTCTAGACATCAATGTACGTACCCGCCGAGG
TTACACAGGAAGAAGGTCACACAGGATTTCTCATCCACCTTCCTTCTGCG
GTGCGTACCTTATTTTTTATCGCTAGAAGGATTCAGCCATTCCTTTCCCT
CGTCGACCGTGAAGTCGAATTTTGCGTACTGACGAATTAATCGTTATCCA
CCCGTTGGGCATTTTTATTTTAGTTTTTTAGTTTTTAGTGGGAAAAATCC
CGTTTGCCGGGATCGAACTCACGTCCCAACGTGTCAGAGGGTTACGAGGT
ACCTCTGAGCTACCGGGGCGACCGGCTTACGGTAGTTTTTTACCACCGAA
GTAAATGGACATACTGGTATGCTGGATACTCTTATGTCAGATGATGTTTG
TCTCCCCGTTCGATTTCTCAGTCTCCTAGAGAGCACACGCTTTTGCGGTG
GACGGTTATAAAATCTACTGCCACCCTTTCCGCCGTTGCTCGTGCTACGG
CAGCAGAACGCATGTCGTAAAATGGGAGCGTTCTTTGTACCACAAACTAT
CATCTGTTCACAGCAGTACGTAATGAGATCTGTTGTACTGACCAGTCTCG
CGAGACCAAATTCTCAGGCGCGAACGGGGAATTTCCCCTAATCAGCTGAC
TACAGCCGGTACTTTCAACATGCCCACTTCATACCAATGGTGGGTGTGGG
AAAGAGAGGCGCATATTAGTTGTTCTATGGTGATCTGCCAAGGCAGCACT
CGTTTGGAACTACTTTGAGGTTTCTTGGCTCTGTGTCGGCGGACTCTCGG
CAGTGAACGCCATCGGTACGCAATCGCGTGACCCGATAAACTCGCGATTG
ACCCGATGGTGTATATATATATATATATGGTCATCACATATAGCAGAGTA
TGGATCAACCGGGTAAAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGGAAAATAATATTCCCCTGTCCCCGTGCGTGCCTGGGAATTTGGTCTCG
CGAGACGGGATCAGCCGTCTCGTCCCGCGTCAGCCTGCTCATCTCCATAC
TCAGGCAGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGC
GGCGTCCATTTATGAAACCGCCATACCTGTACGCCATCGGGTCAGTCCCG
AGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGT
CCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGC
TTTAGCAGGTCACTATGGACCAACTAATATGCGCCTCTGTTTCCCAAACC
CACTATTGGTATGAAGTGGGCATGTTGAAAGTTATGGCGGTTTTAAATAA
ATAATAAATAAGTGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTTAGT
AAACACCATATTTATGGAGATGAGCAGGCTGACACGGGACGGGACTGCCG
AACCTGTCTCGCGAGACCAAAGTCATAGGCGCGAACGCGGACAGGGAAAT
ATTAATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCC
GGTTGGTCCATATTTTTTGCAACGTGTGTGACCATACAAGGAGGATCGAC
AACCATACTCGGTTGATCCATACTCTGCTGAAAGTGCGACCATACTACTT
ATTAGTGCCCAAAGCGACTGAGCCCGTCCACAACGTTCCGAGTAACTACA
ACTTCCGCCTAATGTCTGTATTGCACATGTCTATTCATGCCTCCGATACT
GCGTGTATTCTACGTATCCACTGTGTCATGGGTGTGCGAAACGAGAGGCA
CACTCTGATTGGTCTATGAGGTTACTTAAATAGGCACCAACCGTTACGAA
CTCGAGCTACCTTGAGGACTACTGGCCCCATGCCGGTGGACTCTCGGCGC
TGAACGTCATCGGTACGCATTTGCGTGATTTGATATCTCGGGACTGACCC
GGTTGAAGTTGACGGTATAGATGGACGTCGTCGTGGAAAGCGGGAGGAAT
GAGCACGCGGGTAAGCACGAGATTCAACTCAAGTGTAGAGAATGAGCGGG
CTGACGCGGGACGAGATGCCAGAACTCGTCTCGCGAGGCCAAATTTTAAG
GCTCTAACAGGGACAGGGATTTCCCCCCCCGTTTACCTGTCCACGAGCAG
GATTCCCACCCGATTGATCCATATTCTGCTGAAAGTGCAAGCTATACATA
CATACTACCTGGTATACCGATAGTGGGTTGCATGGTGACACCTGAAAAAG
CACCCATTATTGATACTACCTTGAGGACTACTGGCCCTGTGCCAGCAGAC
TCTCAGCAGTGAGTGAACACCATCGGTACGCTTTTGGGTTACCCGTTAAA
CTCGGGACTGACCCGATGGAGGTTGACAGTATGGATGGACAGCGTCGCGG
AAAGGGGTAGGACCCGTCAGTAAACACCAGATTCCGCCTAAGTGTGGAGA
ATGAGCGGGCTGACGCGGGACGGGGCGGCCTGAGATTTTTCGCGGGACCA
AATTCTCAAGCGTGAACGGGGACAGGAAAACAAACATTTTCCGTTTTCAG
GCAGGATTGGCAACCACACCAGGTTGATTCATGTATGGTCATCACATATA
CCAGAGTATGGGTCAACCGAGTAAGGTTGTCAATCCTGTCCTGCTCGTGG
TCAGCTGAACAGGGAAAATGAATTTCCCCTGACCCCGTACGCGCCTGATA
ATTTGGTCTCGCGAGACAGATTCAGCCGTCCCGTCCCACGTCAGCTTTCT
CATTCTCTATACTCAGGCTGAATCTGGTGCTTGCTCACGAGATTCCTCCC
GAGTTTCGCGCGGCGTCCATTTATTGCAAGGATCAACCGGGTAAGGTTGC
CGATCCTGCTCGTGGCCAGCTGTACAGGGAAAATATTTTTTTCCTGTCCC
CGTTTGCGTCTGAGAATCTGGTCTCGCGAGATGGGTTCGGCAGTCCCGTC
CCGCTTCGGCCTGCTCATCTCCATACTCAAGCTGAATGTGGTGCTTACTT
ACGAGGTTCCTCCCGGGTTCCGCGACGGAGTCCATTTATTTATCTCAAAC
CGCCGTACGCCATCGGGCAGTTCCGAGTTTATCGGGTCACACCATTGAAT
ATCGATGTCGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGCAAACCT
CAAGGTAGTTCGAAACGGGTGCTGCCTTGGCAGGTCACCATGGACCAATT
AATTCGCGCCTTTCTTTCCCACACCCACTATTGGTATGAAGTGGTTATAG
CATGTTGAAAGTATCAGGTCTGCCGATTGAGCTGACGATGCATACCTACA
TGCATACCGTCTAAATAGGAAATTTGAGTCGAAACATTTGGAGAAAATTC
CACCTGACGTTCACTATTGTAGTAGTTAGTTAGAACGCGATGAACATTGT
GTAATATGAAATTGTTCTGCGCGCGGTCAAAACATACAACAAGTAAAAGC
CATCGATTCAAGCTATTCTGGCACAGCATTGTACTGGAACACTTGACGAT
GAAATTAAAGGGACGGGCGGGTGGGAGTCGTTCAGAGTCACTTTTCCGGG
GCGTTATTTGTCATTTGTCCCACGCAAACATACAGTCAAGCACTGTTTCC
CTTTAAGCGTACAGCATGAGGTTATACAACTCGAGGGGAACTATTTGTCC
CAGATGTGGGGTTGTTTCGAACCATCCCACATGGATGCAAACGATGAAAA
CCCAGGGAAACTGCTGCCCAGCGGCCCCTCCCCTTTTGTCCCCTTTTTGG
TTCGCTTTTGGTTCACCAGCCATAAAGTGGGACCATGCGGTCGGCTGGGG
TAGGGGGGGTCTGGGTTAGCGTTAGCGATATTGGTCGGTTTGGCCATACC
GGAAGTGATGGGGCGCCCGGGAGAAGACCAAAAAGGACCAAAAAGGGGAC
AAAAGGGGAGGGGACGCTGGGCAGCAGTTTCCCTGGGTTTTCATCGTCTG
CATCCTTGTGGGATGGTTCGAAACAATTCCACATCTGGGACAAATAGGCG
CTCCCATACAACTCGGTATGGCAGGAGAGGTTGGCGCTGTTCGCGATGAA
GCTGACTCAGCAGGCACGCAAGTTGCACAAAATGACGAAGAAGCTGATGT
TGAAAGTGGCGCTTGCGATAAAAAAAACTTGAGAACAACGAACAGTGCAG
AAGTTCCGGTGATGGTGAGGAGTGGGAAGGAGCGCAATCACCTTCTCACT
CCAGAGTTCAGGTGCTGGTGGGGAGTGAAAAAGGTGGGCGACCACTTCTG
TCTCTGCTAACACTAAAAGTGCTGGAACCTTATTAGTAGTACTGTAATAA
ATTTCCGGACCCTAAAACGCCAGTAAGAACAGTTGTTAAAACACGACACA
CCAGAGATTTTTTCTGACAGTCCCGAGGCACAATCCACGTACAACATCTA
GAACATATACCTACTCGTGTTTGAAGAAAATAATAGTCTGAGCACAACGT
ATACTGGTATTGCTACGATACATTGGCTAGACGCAAAAGGGTTGGTTATG
TGGCCTAATCTCAAATGCTAATACTCCTCTCATTGAAAGTGGCATACAAA
ATCCAGTCCAAGCGAAAACATGAACTAAGAAACAATGCGCTCGGCATCAG
CAACAAATCAAGCAATAACACGAAGGTTTGTCAAAGACGAGTTTGATCGT
CCATGGCTCGCAACTGGTCACGAAAAGTGAAAAGAAAATGCGCCAGCTAG
TGACTACTACGGTACATGCTACGAAAGAGCAATGCAGTGTACGTGCACAT
TTATCTGTGAAAACTACAAAGGGCGCTAAAAAACGAGAAGAATACGAAGT
ACTCCTCCCGCTGGAAGATGATTAATGTCTTCGTACTTTAAGCCTCAAGT
TTGTTGATGAGCTTGAAGTCCGCCGGCTGATCCTCGGTCTCGGCTTAGTG
GATGCTGATCCTGCCCTCCTCCACCAGCTCTTGCACGAAAAAGTACCTCA
GCGCGATGTGCTTTGGGCGAGGACTGTGTAGGTGCGACCTGCAGCGCCGA
AGTATGTCGATGTACAGCGGCACGCTGCCGAAGCCCTCGTCGAAGCCCAG
CTCCAACATCATGTTGGAGCAGAATACCTGCCTCCTTCATTGTCAGAGCT
GCCGTCACGAGCTCTGCCTCCATCGTGGACTGTACGGTCAGCCCCTGCAG
TCCCACCTTGAAGCTGATCGAGGCTTAAGCCAGCATCACGATGTATGATT
ACGTAGACCTGCCGTTATCGGGATTGTTGCCCCAATTGACATCCAAGAAG
GCAGCAAGCCTGAAGCCGCTCTGCTTGTAGGCGATGGAGAAGTTTGTAGA
CGCGGCCAAGCAGCGAAGCAGGTGCTTGGCCGCACCCATGTGAGCTTTCA
CGGGCTTGGATATGGCCCTCGCCCGCTGGTTGGCCGCGTAGAAGATGTTG
TAGCGGGTGACCTGTGCTAGGTACACCACGGCTCCAGTGAACGCCTGGTA
GTGCCGCTTTTTCTCCTCGTTCAGCAGCTGCTCCTCCGGTTGGTCCAGGG
ACAGTTCCGGCCCCTACTCCGAGGGTGTACGCGGGGTTGCAGCCTTCGAT
ACCGTAGCGCTGTACCACGTCCTCCGTACAGTCTTTCCGACTGATGGCGA
TAGCCCCTTTCTCACGTCGCACATGTTGGACATCTCGAACCTGTCCATCA
GCTGCTTTCTTGAGATTGTTGAGCAGAGTCTTGCTGGCGCTGAGGAACAT
AATGTCCACGTAAAACGTCAGGATGACAAAGCCACTCTCGTCTTCGTCGA
TGTACACGCAAGGATTCGACTTTGAGCGGGCGGAAGCCGATGACAGCGAG
CTCCACGTCCATCGTGCCTAACCAGTGTTTTGGGCTCTGCCGAAGACCGT
TCAAGCTCTTCTTGAGCTTCACGACAAAATGAACTCCTGCTTTGTCGTTG
GTCTGGTAGCCAGGCACCATCTCGTCGAACACGTCCTCTTCGACGTCGGC
GTTAAGGAATGCCGTCTGCATGTCCAGCATATGCACCTCGTAGTCCAGCT
CCGCCCCGATTACGAGCATCATGCGGATGCTCTGGAGCCTAGTTCCAACA
ACCTTGTCCCCCGCGGGGACTGAGGTAATAGTTACCAGCAATCTCCTTGT
CCGATGCTGCCTTCCAACGTGCCGTCTCGGGGAGATCCATGGCCTCCTTG
AAGGTGTTCGGGATACGGTCCGAAGCTCCACCACCCGAACAGCTCGGCTG
CGGGATGGTCATAGTGCATACGACTTCAGCAGCAACCACCTCGATATCAA
ATCCGGCGTGTCCGCTCTGATGTAGGGGCCCAGTTGTCGTAGCTTGTGCA
GCGTACTCGGCTGGAAAAGTTCCGCCAGAGTGGCGTGGTTGTTGTTGTTG
AGGCGTACTCCCCTGTAACAGGTGAACGCGCCCGTCGGCCCCGCGGCAGC
ACGCCGCGTGACGACGTTAGGCCGAGGAATGCTGTTGCTGCGAATAGCAG
TTGCTGCGAATAGCGGTCCCCCTTCTCGCTGTGTAGCCGACATGGGGGCC
GGCGAAAGTCCCCCTGATTTGGGCGACGCTCCTCCTGCCTTCGGCGGTGA
TGCTCGCCGTGACGAAGGCCCCCCTGCTGCATCATTAAAAGGTTCCGCTG
GTAATGCGGCTCCTGGCGAAGGTGCATGGAGATTACCCAGTCGCCGGTGC
AACACCTGGGCATTGTCGACCGCGTTTATTCCTTACTCCTTGACACCGGA
TACTGCGCATTAGCTTGATGCCGAGGTGGTTCCTGTTGAAGTCGCCTACA
CCATGCCCAACACGGAGCCGAGCTGTTCGAGACCGGAGGAATCATACCGT
ATCCCGAACACCTTCGAGGCGACCACGGACCTTCCCCAGGCGGCGCGTTG
GAAGGGACAAAGAGATTGCGAGTATGGAGAAGCACGGCGTCTTCGAACTC
GTACCTATTACCTCAGTCCCCGCGGGACACAAGGTTGTTGGAACTAGGGC
ACAAGATTGTTGGAACTAGGCTCCAGAGCATCCGCATAATTATCGCAATT
GGGGCGGAGCTGGACTACGAGGTGTACATGCTGGACGTGCAGGCGGTATT
TATCAACGCCGACGTCGAAGAGGACGTGTTCGTCATGGTGGCGCCCGGCT
ACCAAACCAACGACAAAGCAGGAGTTTCTTTCCTCATGAAGCTCAAGAAG
TGCTTGTAAGGTTCGACAGAGCCCGAAGAACTGGTTCGGCACGATGGGCG
TCGATCTCGTCGTCATCATCCGCCCGCTCACGATCCGGACATCTACGAGA
CTGGCCTTGTCATCCTGACGCTCTACATGGACATTCTGTTCCTCAGCGTC
AGCAAGACTCTGCCTAAGAATCTCAAGAAGCAGCTGATGGACAGGTTCGA
GATGTCCGACATGGGCGACGTGTCGAAAACCCTCGGCATGAATGTCACCC
GCGCTCGTGAGGAAGGGGCTATCACCATCAGCCAGAAAGACTACACGGAG
GACGTGGTACAGCGCTACACCACGTACACCCTCGGAGTAGGGGGCGGAAC
TGTCCCTGAACCAACCCGAGAAGCTGCTGCTGAACGAGGAGGAAAAGTTG
CACCACCAGGCGATCACTTGAGCCGTGGTGTACCTCTCACAGGTCACCCG
CTACAACATCCTCTACGCGGTCAACCAGCTGGCGAGGGCATGGTCCAAGC
CCCTGAAAGCCCACATGAGGGCGACCAAGCACTTGCTTCGCTACTTGACC
GGGTCTACAAACTTCCCCATCACCTACAAGCAGAGTGGCTTCAGGCTTGC
TGCCTTCTCAGATGCCAATTGGGGCAACAATCCCGACAACGGCAGGTCTA
CGTAATCATACATAGTGATGCTGGCCAACGCCTCGATCAGCTTCAAGGTG
GGACTGCAGGGGCCGATCGCACAGTCCACGATGGAGGCAGAGCTTGTGAC
GGCAGCTCTGACTATGAAGGAGGCGATGTTCTGCTCCGACGTGATGCGGG
AGTTGGGCTTCGACGAGGGCTTCGGCAGAGTGCCGTTGTACATCTACAAC
ACGTCGGCGGCAACCGCACCTACAGTTCTCCCGCAAAGCACATCGCGCTG
AGGTACTTTTTCGTGCAAGAGCTGATGGAAGAGGACAAGATCAGCGTCCA
CTACGTCAAGACCGTGATCAGCTGGCGGACTCGGGCACCAAGCACCTTAG
CAAGCACCGTCACCGCAACCTCATCAACAAGTTTAAGGCTCAAATTTTTA
AAAAGGTTGACCATCTTCCTGCTGGAGGAGTACTTGTGTGTTCCTTATAT
TTTTTAGTGCGCACTCTGTAGTTTTCATAGACAAATGTGCATGTACACTG
CATTGCCCTTTCGTAGCATGTACTCGTAGTAGTCACTAGCTGGCGCATTC
TCTTTTCTCTTCTCGTGATGAGTTGCGAGCCATGGACGGTCAAACTCGTC
GGTGACGAACCTTGGTATTATTTCTTGATTTGCTGCTCTGATGCCAAGCG
CATTTCTAAGTTCAAGTTTTCGTTTGCACTTGATTTTGTATGTCACGCTC
AATAGAGGGGAAGTATCAGCATTTGAGATTAGGCCACACAACCAACTCTT
TGCGTCCAGTCAATGCATCGTAGCATACCAGCAAATCTTGTGCTCAGACT
TATAGCGAGTAGGTATATGTTTTAGACGTTGCGCGTAGATTGGGCCTCGG
GACTGTCAGAAACATTTTCAGGTCTGTCGTGTTTTGACAGCTGTTCTTAA
TGGCGTTTTAGGGTCCGTAGTTTGTTACAGTCTTACCGGTACTAATACGG
TCCCAGCACTTTTAGAGTTAGCAGAGACAGAAGTGGCCGCCCACCCCTTT
CACCCCTCACCAGCACCTGAACTTCTGCACAACAGAGAAAGCTGGTCCGG
ATTGTGGTGAAGTGAAATATTATACATTATACATATTGTGGTTTGCATCA
TCCGAGGCCCCGCAAGCGATCGCCTGATCGTTGTCCAATTCTGACGGCCC
CTGGGACCCTCGTAAGATGTTGAAGGATGGCTTGTTTTAGAGCGACAGGC
CGACGCGGAGCTTGGAAGACCATTCCAGAAAGTCGTCCGCCTGCCGTCGA
ACTTAGAGACTTGCTTGACCATCTGTTGAAGAACGTTGCCATCCATCTGG
ATTATTCTCCACGCTCAGCGATGAAAGTAAAGGGGTAACTAAAACTGATT
TACTCCTTGTACAGACTTCATGGATATCCCCCCCCCGAATTTGTAAAGCT
CGGCCTGTGCTCCTGGATCACACTACCTGTGCGGTCGATGATGCAGCTTG
TGCAATCTCCGCACGCGTGGAGCCTCTACATGACATGTGTGCTCCTGGCG
CGCACTGCCTGTGCCGCCGATGATGCAGCTCATGCAATCTATGACCGCCT
TGGGCCTCGACTCGACCTGTGTGCTTCTGGCGCGCATCACCTTTGCCGCC
GATGATGCAACTTGTGCAGTCTGCGAACCCCTCGAGCCTTCGCTCGAACC
GTGTGCTCCAGGCGCGCACTACCTGTGCCGTTGATGCAGCAGCTTGCTGT
GCAGTCTCCAAACGCCTCGGGCCTTTACTCGACCTGGGTTCTCCCGGCAG
GCACGAACTGCGCCGCCGACACCGCAGCTTATGCAGTCTCCGAACGCATC
GGGCCTTTACTCGACCCGGTTTTTCTGACAGGCACAAACTGTGCCGCTGA
CTGCAGCTTGTGCAGTCTCCGTACGCCTCGGGGCCTTTACTCGACCCGGG
TTCGCCTGGCAGGCGCGAACTGTGCCGCCGATGCTGCAGTTTCCGAACGT
GTCGGGTTCACCCTCGACCCGTGTTCAACTGGCAAACACGAACTGTGCCA
CCGATGCTGCAGTAATGACTCGACTCACGATTTTCCAAGTTCGATAATTC
TGTGACTCGTAGCGCCTTCAGGCTCCTTTGAAGACGTCTCCGCGAAGGTC
CCTGGTGTACTCCGTGCTGAAGTGAATGCTCACAACCTATAAGCGTATGC
TGCAGCTTGGTATGGCAGTAGAGGCCGGCGCTGGTCGCGATGGAGCTGAC
CCAGCAGGCACGCGAGTGTACAAAAATGAAGAAAGAGGCTGGAGCTGAAA
GTGGCGCTTGCGGCCAAGAAAAGCTTGAGCATAAAGAACAGTGCACAAGT
TCAGGTGCTGGTGAGGAGTGAAAGAGATGGGCGACCACTTTAGTCTCATG
CTAACACTAAAACTTCTGGGACCTTACGAATAGTACTGTAATAAATGTCT
GGACCCTAAAACGCCAGTAAAAACACGACAAAACTAAGAACTTCCTGACA
GCCCCGAGGCTCAATCTAGGTGCAGCGTCTATGATATAATATATGCCTAG
TCGTGTTATACTCTTGAGCACAACATATACTGTACTAAAGAGTTGGCTCT
GTAGCGTAATCTCAAACGCGAATATTCCAAACGCCACAAATACAGAGCTC
AGAAGCCGAACGTGGCGACTGAGCGGTCAAGACTCAAAATCAAGAAAATA
AGCGGAATGATCCTAATACAACACTTTTGCGTAGTGTACCCGGTATGCTG
CACCCTATTAACAGTCTCGAATTTTCCACGCCGTGCCCCTTTTTTTTCTA
TTCATTGTCCAGACATGACAAAAACAGAAGGAAAAATGCTTGGCCCATCG
CGATTAATAAACCTACCCACGGTCGACCGCGTGTCTTGCTGTCTACTCCA
GATCTATCGTCCCTGTTCGGGCAGCACTGACTCTCATCGGAGTTTGCGGA
GACACACCGTGCGCCGTGAGCGTGACAGAAGCGTCTCCCTTCTTGGCAGG
TCTTGCGTGCAAGCGGAGTTTATGACCGCACTGGAAAGAAGCAGCAAACA
GCCTTATCGCGCCAGATACACTATATATAGCTCGCACGTGTAACGCCGTA
CTGTAGTTCCGGTGCGACTACCGGTAGCAGAGATTTAGTTGGCTCTTCTC
AAGAAGCGTGCGCGTCTGTGTTTTGATTTGAACTTGCTTGATGTTCGGGT
ACGAGTACGATTTTTTTACTTTTGTTCCTGCAGCGAATCAGTCGATACGG
AGGTGCTTTATCAACAGAAAAGTAGCTGAAGCATGATACGGATAACACGG
ACCAGTCATGACTACTCCATCGCCAAGAAAATGGAGGACGGTTTGAATCT
TATGCTATATACTACAGTATATATCTTCAAGGCCCATCAGGCTGGAAAAA
ACGCTAACATACTGCGATTCGTGGGCGGCCCAGACGGTTACCAGGTTTAA
GTCCTACACGGTAGACCTTCGGTAGACCTTCGAGGCCGTCAGGGGGCAAA
ATCGAAAGTCTACCGACAGCCGTCACTCTAGGGTTCTTACATGGGGGGTG
AGGTGATTCCGACCAGCGCTACTATTAT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig91:342443..354720- >mRNA_F-serratus_M_contig91.20509.1 ID=mRNA_F-serratus_M_contig91.20509.1|Name=mRNA_F-serratus_M_contig91.20509.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig91:342443..354720- (Fucus serratus male)
ATGGATGCTTCGTCCTACACGGAAGTAGCCACCTCATGCTTTGTGATAAT
CAAAATATGGATGCTTCGTCCTACACGGAAGTAGCCACCTCATGCTTTGT
GATAATCAAAATAACTTTTGACAGGGCAAGCACGAGAACACGGTCCTCCA
AAGTCTCCAAGCGAGGAAAAGATCAAATCACGAAGCAATCGGAAAGTCAA
GAAGAAAGCGTTGTCTTGCCTACATCGGCGGCCTTTGAGTCCTGGATCCT
CAGCGCCCTCAAAGACATACACGGCGAGCTGGGATCGATAGGCCAGCAGG
TTGATGTCCTTTCTTGGAACCCCATGAGGGCGGAGGGAAGCTTGCGGATA
TCTTCCAGAACTTTTGACAGGGCAAGCACGAGAACACGGTCCTCCAAAGT
CTCCAAGCGAGGAAAAGATCAAATCACGAAGCAATCGGAAAGTCAAGAAG
AAAGCGTTGTCTTGCCTACATCGGCGGCCTTTGAGTCCTGGATCCTCAGC
GCCCTCAAAGACATACACGGCGAGCTGGGATCGATAGGCCAGCAGGTTGA
TGTCCTTTCTTGGAACCCCATGAGGGCGGAGGGAAGCTTGCGGATATCTT
CCAGATCTATCGTCCCTGTTCGGGCAGCACTGACTCTCATCGGAGTTTGC
GGAGACACACCGTGCGCCGTGAGCGTGACAGAAGCGTCTCCCTTCTTGGC
AGGTCTTGCGTGCAAGCGGAGTTTATGAATCTATCGTCCCTGTTCGGGCA
GCACTGACTCTCATCGGAGTTTGCGGAGACACACCGTGCGCCGTGAGCGT
GACAGAAGCGTCTCCCTTCTTGGCAGGTCTTGCGTGCAAGCGGAGTTTAT
GA back to top
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