mRNA_F-serratus_M_contig901.20418.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI) HSP 1 Score: 865 bits (2235), Expect = 6.240e-305 Identity = 418/499 (83.77%), Postives = 466/499 (93.39%), Query Frame = 2
Query: 512 YKHAIHLRGLPWNASTKDVADFLSPVEVDEDGIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYARAIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRAFFEGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGALYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT 2008
Y HA+HLRGLPWNASTK++ DF +P++V++ IH+VHN+RGEAYVKL++ES LE ALKKDRN IGRRYIEVFRSS+ED A+DD SKG DG Y+GVVRMRGLPWSANEGDIR FF+G+ I+KDG+++TLNRDGRPSGEAYVVFE+E AK+ALKRDK+KIGERWID+FEATKGEVYSMTGG K+GDQ GVSFDTTDSAYTGVVRMRGLPFEATK+QIR FF I+VK+++IFIVTRPDGKASGEAFVLF++EA+AE+AL KDKEKLGDRWIDLF TNKGALYQRVGVGVKMAAKPDAEFRGVLRMRG+PF +GVEEIR FFRGYKVQ+HGVFVVNGGDWRPTGE+YVLFDSEDEAERAFKALDKQKIG+RWIELFRSTKGDLYTATVRST+LGMERGGA+Y + PMTCVKLRGLP+NVTEN+IF+FF+GLTVIGSFICKDVMARPTGEGFVEFA+VDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT
Sbjct: 44 YTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQG-GVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT 541
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA) HSP 1 Score: 517 bits (1331), Expect = 8.100e-167 Identity = 277/573 (48.34%), Postives = 358/573 (62.48%), Query Frame = 2
Query: 512 YKHAIHLRGLPWNASTKDVADFLSPVEVDEDGIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYARAIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRAFFEGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKV-QDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTI-----------------------------------------------------------------------LGMERGGALYAQ-TPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 2005
+ H + LRGLPWNA+ KDV DFL +E+ ++ +++VHNTRGEAYVKL SE+S EA +K DR +GRRYIEVF +S ED +++ K +G GV+RMRGLPW+A E DI +FF G ++ GV+I NR+GRPSGEAYVVF SE DA +A + RDK K+G RWIDLFE+TKGE+Y+ TG S+++ G D Y GV++MRGLPF+ATKAQI FF V+D+++FIV DG+ +G+AFV+F E DA+ AL DKEKLG RW+DLFP+ K A+Y+RVG V+MA++PDA +RGVLRMRG+P++AG +IR FF Y + + G+ V+ G D RP+GEAYV F +ED+A+ A L K+KIG+R+IELF+ TKGDLYTAT R + G GG A P TC KLRGLPY VTE IF FF GL VIG FICKD RPTGEGFVEF ++ C ++RNR M++RY+EVFA +K+DVLQ+I G
Sbjct: 152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA) HSP 1 Score: 441 bits (1133), Expect = 8.720e-140 Identity = 233/497 (46.88%), Postives = 322/497 (64.79%), Query Frame = 2
Query: 521 AIHLRGLPWNASTKDVADFLSP--VEVDEDGIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYARAIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRAFFEGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGG---ALYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1993
A+ LRGLPWN+ V F S + + + IH++H GEA+V+ ++ + ++AL +R IG RY+EVF + D A A + ++GQ+D D+RGVVR+RGLP+SA +I FF+ + +DGV+I++NR GRP+GEAYVVFE+E D + A+K+DK ++G RW+D++ +TKG +Y++ D+ V V F + VVRMRGLPF+A K I FF + + I VT G+ SGEAFVLFA+E +A RAL KDKEKL +RWIDLFP++K L RVGVG A KPDA R +++RG+PF+A V ++R F G + +HGV+++NG D RPTG+ YV+F SEDEA RA A + + R +E+ + K DLY T+ I R G Y++TPM C +LRGLP+ V E IF FF G+ VIG F+CKD+ RPTGE FVEF D QLA+ RNRE + +RYVEVF +K DV+ +I
Sbjct: 24 AVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNVVLADVDEGVDVVF----AEEVHVVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRI 513
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK) HSP 1 Score: 434 bits (1117), Expect = 6.530e-137 Identity = 233/509 (45.78%), Postives = 315/509 (61.89%), Query Frame = 2
Query: 515 KHAIHLRGLPWNASTKDVADFLSPVEVDEDGIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYARAIDDAG-SKGQSDGDYRGVVRMRGLPWSANEGDIRAFFEGVPIQ--KDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSV-----------GVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGD--WRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGALYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1993
K+A+ LRGLPW+ S + ++L V + + GEA ++ S +AA +DR +G+RY+EVF EDY R ++ G ++ +DGDY GV+R+RGLPWSA+ D+ FF G+ ++ + GV+ +NR+GRPSGEAYVVF S A A++ L+RDK ++ RW+DLF ATK EVY+ Q G+ +D +Y GV+R+RG+PFE TK QIR FFG ++ D+FIV RPDG+ +G+AF +F SE DA A DK+K+G RW+DLFPT K LYQR G V AA+PD E VLR+RG+PF AG +IR FFR Y +HGV+VV D P GE YV F D AERA ALD+Q + R++ELF T+GDLY T S +L M+ A+Y MTCVK+ GLP V E+ IF FF G+ VIG FIC+D TGEGF EF ++ + Q SRN+ M DR V + +K+DV+++I
Sbjct: 120 KYAVWLRGLPWDTSKDAIKEWLG-AGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENAHKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREI 627
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA) HSP 1 Score: 421 bits (1082), Expect = 1.820e-135 Identity = 200/359 (55.71%), Postives = 269/359 (74.93%), Query Frame = 2
Query: 920 RPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGALYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 1996
RPSG+A+VVF S A+ A+K+DK ++G RWIDLF+ TK E+Y + S+ +G + D+ Y GV+RMRGLPFEA+K IR FF + D +IF+V RPDGK SG+AFV+F SE DA+ AL DK+++G RW+DLF TNK LYQRVGV V+MA +PD+ ++GV++MRG+P++ GV +IR+F +KV+ HGV+++NG D RPTGEA+ + +ED+A A LDK+++G RW+E+F +K +LYTAT S I+GM+ A++ T MTCVKLRGLP+ V EN IFTFF+GL+VIG FIC+D+ R TGEGF EF+S+++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct: 1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQ--STARGFGPAQIQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA) HSP 1 Score: 400 bits (1027), Expect = 9.240e-123 Identity = 226/547 (41.32%), Postives = 321/547 (58.68%), Query Frame = 2
Query: 524 IHLRGLPWNASTKDVADFLSPVEVDED-----GIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDY--------------ARAIDDAGSKGQSDGDY-------------------RGVVRMRGLPWSANEGDIRAFFEGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEV---------YSMTGGSSKQGDQSVGVSFDTTDSAYTG---VVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGA-LYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1993
+ L GLPW S DV +FL + V I ++ ++ GEA V++ S E ALK +G+R++++ ++ E + A + DA + + G+ +GVVRMRGLP+SA E DI AFF G + GV++ + GR SG+AYVVFE+ +A+ ALK DK KIGERWIDLF ++K E+ Y GG + ++ G+ + G V+R+RGLPF+ T+ ++ FF + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y+V GVF+ G D RPTGEAYV+F++ ++A A +AL+KQ + RWI+L+ ++KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC) HSP 1 Score: 361 bits (927), Expect = 2.550e-110 Identity = 208/524 (39.69%), Postives = 291/524 (55.53%), Query Frame = 2
Query: 524 IHLRGLPWNASTKDVADFLSPVEVDED-----GIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDY--------------ARAIDDAGSKGQSDGDY----------------RGVVRMRGLPWSANEGDIRAFFEGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYTGVVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGA-LYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATS 1969
+ L GLPW S DV +FL + V I ++ ++ GEA V++ S E ALK +G+R++++ ++ E + A + DA + GD +GVVRMRGLP+SA E DI AFF G + + GV++ + GR SG+AYVVFE+ +A+ ALK DK KIGERWIDLF ++K E+ FF + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y+V HGVF+ G D RPTGEAYV+F++ ++A A +AL+KQ + RWI+L+ ++KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A +
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH------------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA) HSP 1 Score: 297 bits (760), Expect = 6.810e-88 Identity = 146/295 (49.49%), Postives = 201/295 (68.14%), Query Frame = 2
Query: 1130 VVRMRGLPFEATKAQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGA-LYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1993
V+R+RGLPF+ T+ ++ FF + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y+V HGVF+ G D RPTGEAYV+F++ ++A A +AL+KQ + RWI+L+ ++KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.210e-86 Identity = 204/603 (33.83%), Postives = 305/603 (50.58%), Query Frame = 2
Query: 524 IHLRGLPWNASTKDVADFLSPVEVDEDGIHMVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYA--RAIDDAGSKGQSDGD------YRGVVRMRGLPWSANEGDIRAFFEG---VPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGSSKQGDQSVGVSFDTTDSAYT--GVVRMRGLPFEATKAQIRTFFG-----DISVKDT-DIFIVTRPDGKASGEAFVLFASEADAERALTK-DKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGIPFTAGVEEIRAFFRGYKV--QDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGALYAQ---------------------------------------------------------------------------TPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 1984
+ LRGLP++ + + V DF +++ EDG+ ++ N GEA+V+ E S A DR IG RYIEV S+ + R + +G +GD Y GVVRMRGLPW++ E D+R+FF+G + + GV+I + DGR G AY VF+SE +A A+ +D+ ++G R+I+LF+ATKGE+ +S++ D + G S G+++++GL + AT AQIR FF ++ K+ D+ V PDG++SGEAF +F S A + K + ++L RW++L TN+ + V A++P A + G LRMRGIP+T V++++ FF+GY++ HGV +V+ R GEAY F+SE+EA RA +A+D+QK+G R++ELFR ++ ++ + + GG AQ +P+TC KLRGLP++ T IF FF GL VIG+ + +D RPTGE F EF S + LA R+R M RYVEVF +KE+VL
Sbjct: 33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGEL------NSQRNDATRGPSRPRVPPQLENEGILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAKMRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC) HSP 1 Score: 259 bits (661), Expect = 2.060e-75 Identity = 123/252 (48.81%), Postives = 172/252 (68.25%), Query Frame = 2
Query: 1175 IRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFASEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKVQDHGVFVVNGGDWRPTGEAYVLFDSEDEAERAFKALDKQKIGERWIELFRSTKGDLYTATVRSTILGMERGGA-LYAQTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRN 1924
++ FF + IF V R DG++SGEAFV+ S+ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y+V HGVF+ G D RPTGEAYV+F++ ++A A +AL+KQ + RWI+L+ ++KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSR+
Sbjct: 3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig901.20418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig901.20418.1 >prot_F-serratus_M_contig901.20418.1 ID=prot_F-serratus_M_contig901.20418.1|Name=mRNA_F-serratus_M_contig901.20418.1|organism=Fucus serratus male|type=polypeptide|length=615bp MVHNTRGEAYVKLESESSLEAALKKDRNMIGRRYIEVFRSSVEDYARAIDback to top mRNA from alignment at F-serratus_M_contig901:217550..220402+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig901.20418.1 ID=mRNA_F-serratus_M_contig901.20418.1|Name=mRNA_F-serratus_M_contig901.20418.1|organism=Fucus serratus male|type=mRNA|length=2853bp|location=Sequence derived from alignment at F-serratus_M_contig901:217550..220402+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig901:217550..220402+ >mRNA_F-serratus_M_contig901.20418.1 ID=mRNA_F-serratus_M_contig901.20418.1|Name=mRNA_F-serratus_M_contig901.20418.1|organism=Fucus serratus male|type=CDS|length=3690bp|location=Sequence derived from alignment at F-serratus_M_contig901:217550..220402+ (Fucus serratus male)back to top |