mRNA_F-serratus_M_contig9.20349.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A6H5KQA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA3_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.250e-40 Identity = 93/185 (50.27%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 16 VVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSSSSGAHGTPEKVPAPR-----------RSSRKCSPCADPVSTAFTDLEEG-SGMTPNSPEVVVGNANHPRSAWRIPPGAESEVIRLSFHAEVPGNFQ 534
VVFLP+A+G DAVLTVATSAGD+ YRVQA V NP+KV P+V + I VGST++ PI V NP D +LSITE++TTEGFL L MP + TP KV A + R R + ++TAF D E P ++V + RSAWRIPPGAE EVIR+SF AE PG FQ
Sbjct: 309 VVFLPQAVGAVDAVLTVATSAGDIRYRVQANAVENPHKVHPIVVTNIPVGSTYTGPIAVYNPLDEVVLSITEVFTTEGFLRLVMPESLAGGSGVATP-KVSARKGGVTGAGSRRNRHHRHHGGDTESLATAFRDSGEPVEAWHPKVSSLLVEGSPEHRSAWRIPPGAELEVIRVSFTAETPGEFQ 492
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: D8LB05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB05_ECTSI) HSP 1 Score: 152 bits (385), Expect = 1.470e-39 Identity = 94/191 (49.21%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 10 RQVVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSSSSGAHGTPEKVPAPRRSSRKCSPCA---------------DPVSTAFTDLEEG-SGMTPNSPEVVVGNANHPRSAWRIPPGAESEVIRLSFHAEVPGNFQ 534
R VVFLP+A+G DAVLTVATSAGD+ YRVQA V NP+KV P+V + I VGSTF+ PI V NP D +LSITE++TTEGFL L MP S +G G V P+ S+RK + + TAF D + P P ++V + RSAWRIPPGAE EVIR+SF AE G F+
Sbjct: 218 RGVVFLPQAVGAVDAVLTVATSAGDIRYRVQANAVENPHKVHPIVVTNIPVGSTFTGPIAVYNPLDEAVLSITEVFTTEGFLRLVMPE--SLTGGSG----VATPKVSARKGGVTGAGSRRNXXXXXGGDTESLPTAFRDPGQPVEAWHPKPPGLLVEGSPEHRSAWRIPPGAEMEVIRVSFTAETTGEFR 402
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A813HQR7_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HQR7_POLGL) HSP 1 Score: 85.1 bits (209), Expect = 5.850e-16 Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 1
Query: 13 QVVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSSSSGAHGTPEKVPAPRRSSRKCSPCADPVSTAFTD---------LEEGSGMTPNSPEVV---VGNANHPRSAWRIPPGAESEVIRLSFHAEVPGNF 531
Q++FL GD + +++ T+ G S+ V+A N Y+V+P+ ++ + VG F+ P++V NP + L + E++TTE FL LA+P+ AH PE A + S +T F+ +EG+G T PE + +A AW +PP + VI LSF A +PG +
Sbjct: 173 QILFLAPEPGDFEGQVSLQTNLGLASFSVKASASANQYRVEPL-QASVMVGERFAPPLLVYNPDSASTLHVHEVFTTESFLRLALPDGLHE--AHLAPEGKEADTVTFFTFS--KKEGATGFSKNKEDXXXXXXKEGTGETARQPEAISQAAASALQATGAWAVPPLQQKTVIHLSFTARIPGQY 352
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A0G4E869_VITBC (TMEM131_like_N domain-containing protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E869_VITBC) HSP 1 Score: 75.5 bits (184), Expect = 1.300e-12 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 13 QVVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMP 270
QV+ +P +G DA LT T+AG + Y + AE + N Y V+P+V R+ VG F + + NP D PM + EI+TTEGFL L +P
Sbjct: 157 QVLVVPLQVGRIDATLTFRTNAGPLVYHLTAEAIENAYWVEPIVAERVPVGVAFRPRVQIYNPYDEPM-RVQEIFTTEGFLQLVLP 241
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A7S4BJ69_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJ69_CHRCT) HSP 1 Score: 75.1 bits (183), Expect = 1.590e-12 Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 16 VVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPN 273
+VFLPR LG + L + TS G Y + A GV +PY++ P + + G ++ PI + NP DS +L +TE++T+E FLHL +P+
Sbjct: 201 IVFLPRHLGPVEGTLDIQTSVGGFLYVINAYGVPSPYRIAPFLNVSVFSGQRYTPPISIMNPYDS-VLHVTEVHTSENFLHLTLPS 285
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A7S3TN31_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TN31_EMIHU) HSP 1 Score: 74.7 bits (182), Expect = 2.330e-12 Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 16 VVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPN 273
V+FLPR LG ++ + V+TS G + GV +PY+V P++ R+ V ++F PI + NP + L++ EIYT+E F+HLAMP+
Sbjct: 128 VLFLPRLLGPVNSTMRVSTSTGVYVRTMTGHGVESPYRVAPLLGVRVPVEASFRPPIRIFNPHVAEHLAVKEIYTSESFMHLAMPD 213
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A7S1CA44_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA44_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.210e-11 Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 13 QVVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSSSSGAHGT 303
QV+ LPR L++ +SAG ++Y + AEGV N Y++ P+ I VG + I + NP +L + E++TT+ FLHL++PN ++ + A G+
Sbjct: 59 QVILLPRVAAPLSCTLSLESSAGTLTYHMDAEGVPNKYRLVPLHAQPIPVGMHYHPTIALYNPHKE-VLQVKEVFTTDSFLHLSLPNATTDAAAAGS 154
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A6A5BGG2_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BGG2_NAEFO) HSP 1 Score: 68.6 bits (166), Expect = 3.240e-10 Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 16 VVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSS 282
V+FLPR L ++ + V T+ G Y+ G+ N Y ++P++ ++ VG+ + PI + NP + L I EIYT+E FL L++P+ +S
Sbjct: 321 VIFLPRTLKRSEGSIIVHTNIGTYIYKAYGGGIENAYNIKPILGYKLPVGADYRKPIYMHNPHQNETLLIKEIYTSEDFLLLSLPDQNS 409
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A7S1KTK6_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KTK6_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 4.360e-10 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 16 VVFLPRALGDA-DAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPNDSSSS 288
++FLPR G DAVL V T+ G Y + EGV+N Y++ PV+ ++ V + PI + NP +L I EIYT+E FL L +P S +S
Sbjct: 145 IIFLPRVAGKVPDAVLVVQTNIGAFVYHMSGEGVINDYRLSPVLNHKLPVDVDYRKPIHIHNPHSETLL-IKEIYTSELFLLLGLPEISENS 235
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Match: A0A498SHV3_ACAVI (Uncharacterized protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498SHV3_ACAVI) HSP 1 Score: 67.4 bits (163), Expect = 7.990e-10 Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 16 VVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESRISVGSTFSHPIVVSNPRDSPMLSITEIYTTEGFLHLAMPN 273
VVFLPR G + VL + +S G +Y V+ +G + Y+++P+V ++I V T P+ + NP + L +TE+YT++G LHL +P+
Sbjct: 151 VVFLPRQEGFIENVLIIHSSLGSFTYSVKGKGKESAYRIRPLVGAKIPVNGTLVSPVQLHNPHPTT-LRVTEVYTSDGDLHLELPD 235 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20349.1 >prot_F-serratus_M_contig9.20349.1 ID=prot_F-serratus_M_contig9.20349.1|Name=mRNA_F-serratus_M_contig9.20349.1|organism=Fucus serratus male|type=polypeptide|length=179bp MFSRQVVFLPRALGDADAVLTVATSAGDVSYRVQAEGVLNPYKVQPVVESback to top mRNA from alignment at F-serratus_M_contig9:459884..461347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20349.1 ID=mRNA_F-serratus_M_contig9.20349.1|Name=mRNA_F-serratus_M_contig9.20349.1|organism=Fucus serratus male|type=mRNA|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig9:459884..461347+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:459884..461347+ >mRNA_F-serratus_M_contig9.20349.1 ID=mRNA_F-serratus_M_contig9.20349.1|Name=mRNA_F-serratus_M_contig9.20349.1|organism=Fucus serratus male|type=CDS|length=1074bp|location=Sequence derived from alignment at F-serratus_M_contig9:459884..461347+ (Fucus serratus male)back to top |