mRNA_F-serratus_M_contig9.20338.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig9.20338.1
Unique NamemRNA_F-serratus_M_contig9.20338.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 3.190e-68
Identity = 151/337 (44.81%), Postives = 197/337 (58.46%), Query Frame = 3
Query:  342 QRHPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDV---ERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGST--------PAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESG---KILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
            + HPLL   DW VL L+EP+L PFM  QK LE +  VTGS+ +  +  LR GL+    + KA+ Q   G       A   + P  EAL  DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+   EH GVW+AVA AA DIA    A  +  A +   ++        P G G GAS  P    F     AA             +     E  +     EV+ +  A G+ + + Q++    K ++ +PLD WR   +++PLLAALARR+LAIP+SQAQSERVFS+AG  VT TR+RL  E VELLV L+N+W VV+EW++S
Sbjct:  224 EVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQ--QGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAF--EAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 5.370e-54
Identity = 132/288 (45.83%), Postives = 167/288 (57.99%), Query Frame = 3
Query:  351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNH-GASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRM-TALSAAGSTPAGS---GPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPA--EHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERV 1190
            P+L   DW VL L+EP+L PFM  QK LE +  VTGS+ VP I  LR GL+     L+  +  G SA    A   +LP  EAL +DF NR+GDGS IL +REG RRQPQGF+  QV ATA+DPR K LYG+   EH  VW+AVA  A DIA    +S    T+ SA  + P G+    PG    P   R    F AA+ A A +A++     +L    E   +    EV  +    G+++      GK +Y DPLDWWR   ++FP LAALARR+LAIP+SQA SERV
Sbjct:  263 PVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARL-SAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.330e-45
Identity = 130/353 (36.83%), Postives = 177/353 (50.14%), Query Frame = 3
Query:  351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQAS--------------------------------------------VRMTALSAAGSTPAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKN 1274
            PLL   DW VL+L+E +L PFM  QK LE S  VT  LV P I +L+ GLD   + LQ  +  A ++V  A+  ++ C +AL  D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+   EH  VW A A  A  +A   +A+                                               T  + A S+P    P A                  A      +  A+ S       +   REV  + +  GLA+   +E G+ +   PL+WWR+ A ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+  E V L+V L+N
Sbjct:  192 PLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEP-AXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSW-EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.040e-41
Identity = 106/262 (40.46%), Postives = 140/262 (53.44%), Query Frame = 3
Query:  600 DFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASACPASK-------------------------RFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGR-EVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
            DF NR+GDG +IL ++EG RRQP GF+ VQV+ATALDPR K+LYGV  +E   VW+ V   A  IA  T+ S      S+        GP                                  +  GG       + A +S V           +  + R E+T + V++G+ M E  + G  +Y DPLDWWR+    FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+   VELLV L++ W +VEEW+QS
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQ------QGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFV---------RLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.050e-33
Identity = 93/201 (46.27%), Postives = 120/201 (59.70%), Query Frame = 3
Query:  351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASAC--PASKRFCGGFMAASQAQAAS 944
            PLL   DW VL+L+EP+L PFM  QK LE S  VT SLV   I +LR  LD   + LQ  +  A ++V  A+  +L C  AL  D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+   EH  VW+AVA  A  +A   +A+   T  + A S+P    P A+A   P  +R   GF  AS A  AS
Sbjct:  164 PLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSPIPVEPAAAAAYQPRRRR---GFATASAAHGAS 360          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.350e-24
Identity = 101/319 (31.66%), Postives = 147/319 (46.08%), Query Frame = 3
Query:  351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEW 1298
            PLL   DW VL+++EP+  PF+  QK  E S +VT SLV+P I +LR  LD   + LQ     A ++V  A+           KD  F  +    + ++        +P+GF+K QV+ATALDPR K LYG+   EH  VW+AVA  A  +A   +A+                                    +Q+  AS+S +   P+                +  AS +  ++ Q +              NA      ++   R+L IPASQ QSERVFSSAG +VT+TR R+  E VEL++ L+N+   V+ W
Sbjct:  236 PLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATED----------------------------------TQSAGASSSLIPVEPAAXXXXXXXX----XXDFAAASAVPGDKQQSA--------------NA------SSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRW 478          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 6.130e-20
Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3
Query:  426 KKLESNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQ 809
            K++  + VTGSLVVP I +LR  L+     L +    + A V  A   ++PC++AL  D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV  +E   VW+ V   A  IA  T+
Sbjct:  191 KRVIQDVVTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 7.020e-18
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query:  549 VLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAV 773
            V  AR  ++PC++AL  DF NR+GDG +IL ++EGPRRQP GF+ VQV+ATALDPR K+L+GV  +E   VW+ V
Sbjct:  155 VNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.350e-14
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 1119 FPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
            FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+   VELLV L++ W +VEEW+QS
Sbjct:  154 FPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216          
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME)

HSP 1 Score: 75.5 bits (184), Expect = 2.130e-13
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 3
Query: 1083 DPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVAL 1268
            D +DWW+ N  +FP+LAA+AR+ LAIPA+Q  SER+FS AG IVT TR++L  E VE L  L
Sbjct:   16 DIIDWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI3.190e-6844.81Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE5.370e-5445.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.330e-4536.83Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JWI1_9PHAE2.040e-4140.46Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE1.050e-3346.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.350e-2431.66Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE6.130e-2045.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVE5_9PHAE7.020e-1857.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPB0_9PHAE2.350e-1465.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A151I7P1_9HYME2.130e-1358.06Zinc finger BED domain-containing protein 1 (Fragm... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig9contigF-serratus_M_contig9:95210..96861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.9
Seed ortholog evalue4.2e-55
Seed eggNOG ortholog2880.D7G5Z0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1325
Cds size912
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig9.20338.1prot_F-serratus_M_contig9.20338.1Fucus serratus malepolypeptideF-serratus_M_contig9 95950..96861 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932611.5771046-UTR-F-serratus_M_contig9:95209..954531622932611.5771046-UTR-F-serratus_M_contig9:95209..95453Fucus serratus maleUTRF-serratus_M_contig9 95210..95453 +
1690964385.576925-UTR-F-serratus_M_contig9:95209..954531690964385.576925-UTR-F-serratus_M_contig9:95209..95453Fucus serratus maleUTRF-serratus_M_contig9 95210..95453 +
1622932611.6054003-UTR-F-serratus_M_contig9:95780..959491622932611.6054003-UTR-F-serratus_M_contig9:95780..95949Fucus serratus maleUTRF-serratus_M_contig9 95781..95949 +
1690964385.5895011-UTR-F-serratus_M_contig9:95780..959491690964385.5895011-UTR-F-serratus_M_contig9:95780..95949Fucus serratus maleUTRF-serratus_M_contig9 95781..95949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932611.6193163-CDS-F-serratus_M_contig9:95949..968611622932611.6193163-CDS-F-serratus_M_contig9:95949..96861Fucus serratus maleCDSF-serratus_M_contig9 95950..96861 +
1690964385.601037-CDS-F-serratus_M_contig9:95949..968611690964385.601037-CDS-F-serratus_M_contig9:95949..96861Fucus serratus maleCDSF-serratus_M_contig9 95950..96861 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig9.20338.1

>prot_F-serratus_M_contig9.20338.1 ID=prot_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=polypeptide|length=304bp
MYVQKKLESNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAAR
VLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDP
RCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGS
GPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREV
TRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIP
ASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQSKA
TPV*
back to top

mRNA from alignment at F-serratus_M_contig9:95210..96861+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig9.20338.1 ID=mRNA_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=mRNA|length=1652bp|location=Sequence derived from alignment at F-serratus_M_contig9:95210..96861+ (Fucus serratus male)
ATGGTGCGCACGCTTAAAGGCAGGGCCAGCATACCACAGCGACGTGTTCT AATCACCCGGATGGAGGAAATTCTAGTGGACCTTCAAGGGTCGGTCGCCA CCATGCTGATGGGCCAGTATGTCTCCATGACCACGGACGGATGGACGTCA CGCGCCAACGAGTCCTACATTTCCTTCACCGTCGTGTACGTCAATGACGA TTGGAAGATGGTGACGCTCGCGCTCAGCTGTTCGAAGAAACAAGGTGCGA CGAAGGGGGATGACCTGGCTAAATCTATCAAGACCATGTTCAAGAACCAC GGCCTCACCGGGCACGTGGTCGTGTGCAACACGGACTGCGAGCCGTCAAT GGTGAAGGCGGGTTGCATTCTCACCGATGATGCCGTATTGATGCACGTTG GGTGCACCTGTCACCGGATTGAGTGCGTGACGGCGCTGGTCTTCGACGGG CCCGGCGTGAAGAAGTCCATGGCTCTAGCTCGTGCCGTGGTGACTCGCTA CACGAAGTCCTCACAGGCTGCAGGGCGACTTCAGGAGTTGTGCGGTATAG TCGGCATTATCCCTTTGAAAGTAATTCAGGACGTAGAGACGCGGTGGTGG TCGACGCAGTCGATGGTCGAGCGCCTGGTGTACCTTCGACGTGCTGTTGA GCTGCATGAGTCCCTGGACAACGTCACCCCCTGCTAGGGCCGGTGGACTG GAACGTCCTGGAGCTGCTCGAGCCTGTACTTGCGCCGTTCATGTACGTCC AGAAGAAGCTCGAGTCCAACAACGTGACGGGAAGCTTGGTCGTGCCGCTC ATCTGTAACCTCCGTGCCGGGTTGGACGTGGAGCGAAAGGCGCTGCAGCA GCCTAACCACGGCGCATCCGCTGTTGTCTTGGCGGCGCGGGTATTGCTCC TGCCCTGCGTCGAGGCACTAGCCAAGGATTTCAATAACCGTTTCGGTGAT GGGTCTGACATCTTGACGTTCCGCGAAGGTCCACGACGCCAGCCACAGGG CTTTCGGAAGGTGCAAGTTATGGCGACCGCCCTCGACCCACGGTGCAAGA TGCTGTACGGCGTTCTACCCAACGAGCACGAGGGGGTGTGGCAGGCGGTG GCCATGGCGGCCGCGGACATCGCCAAGAGCACACAGGCATCCGTCCGGAT GACGGCATTGTCAGCGGCTGGATCAACGCCAGCTGGATCTGGGCCTGGGG CATCTGCCTGTCCCGCTAGCAAACGATTTTGCGGCGGCTTCATGGCGGCT TCCCAGGCGCAGGCAGCGTCAGCTTCCACGGTCACCGCCGCGCCGTCGCT GCCGGCTGAGCACTTCCTGAATGAAGCAGGGAGGGAGGTTACAAGGTATG GGGTGGCTAGCGGGTTGGCGATGGAAGAGGCACAGGAGAGCGGCAAGATC CTCTACCCCGACCCGCTGGATTGGTGGCGGATGAACGCCGTCAAATTCCC GCTGCTAGCGGCTCTTGCCCGGCGCCTTTTGGCCATACCGGCATCGCAGG CGCAGTCGGAGCGCGTGTTCTCGAGCGCTGGGCAGATTGTCACCCAAACG CGCAACCGCCTGTCATCGGAAAAGGTCGAGCTTCTGGTGGCATTGAAGAA CATTTGGAGTGTGGTGGAGGAATGGCAGCAGTCGAAGGCGACCCCTGTGT GA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig9:95210..96861+

>mRNA_F-serratus_M_contig9.20338.1 ID=mRNA_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=CDS|length=1824bp|location=Sequence derived from alignment at F-serratus_M_contig9:95210..96861+ (Fucus serratus male)
ATGTACGTCCAGAAGAAGCTCGAGTCCAACAACGTGACGGGAAGCTTGGT
CGTGCCGCTCATCTGTAACCTCCGTGCCGGGTTGGACGTGGAGCGAAAGG
CGCTGCAGCAGCCTAACCACGGCGCATCCGCTGTTGTCTTGGCGGCGCGG
GTATTGCTCCTGCCCTGCGTCGAGGCACTAGCCAAGGATTTCAATAACCG
TTTCGGTGATGGGTCTGACATCTTGACGTTCCGCGAAGGTCCACGACGCC
AGCCACAGGGCTTTCGGAAGGTGCAAGTTATGGCGACCGCCCTCGACCCA
CGGTGCAAGATGCTGTACGGCGTTCTACCCAACGAGCACGAGGGGGTGTG
GCAGGCGGTGGCCATGGCGGCCGCGGACATCGCCAAGAGCACACAGGCAT
CCGTCCGGATGACGGCATTGTCAGCGGCTGGATCAACGCCAGCTGGATCT
GGGCCTGGGGCATCTGCCTGTCCCGCTAGCAAACGATTTTGCGGCGGCTT
CATGGCGGCTTCCCAGGCGCAGGCAGCGTCAGCTTCCACGGTCACCGCCG
CGCCGTCGCTGCCGGCTGAGCACTTCCTGAATGAAGCAGGGAGGGAGGTT
ACAAGGTATGGGGTGGCTAGCGGGTTGGCGATGGAAGAGGCACAGGAGAG
CGGCAAGATCCTCTACCCCGACCCGCTGGATTGGTGGCGGATGAACGCCG
TCAAATTCCCGCTGCTAGCGGCTCTTGCCCGGCGCCTTTTGGCCATACCG
GCATCGCAGGCGCAGTCGGAGCGCGTGTTCTCGAGCGCTGGGCAGATTGT
CACCCAAACGCGCAACCGCCTGTCATCGGAAAAGGTCGAGCTTCTGGTGG
CATTGAAGAACATTTGGAGTGTGGTGGAGGAATGGCAGCAGTCGAAGGCG
ACCCCTGTGTGAATGTACGTCCAGAAGAAGCTCGAGTCCAACAACGTGAC
GGGAAGCTTGGTCGTGCCGCTCATCTGTAACCTCCGTGCCGGGTTGGACG
TGGAGCGAAAGGCGCTGCAGCAGCCTAACCACGGCGCATCCGCTGTTGTC
TTGGCGGCGCGGGTATTGCTCCTGCCCTGCGTCGAGGCACTAGCCAAGGA
TTTCAATAACCGTTTCGGTGATGGGTCTGACATCTTGACGTTCCGCGAAG
GTCCACGACGCCAGCCACAGGGCTTTCGGAAGGTGCAAGTTATGGCGACC
GCCCTCGACCCACGGTGCAAGATGCTGTACGGCGTTCTACCCAACGAGCA
CGAGGGGGTGTGGCAGGCGGTGGCCATGGCGGCCGCGGACATCGCCAAGA
GCACACAGGCATCCGTCCGGATGACGGCATTGTCAGCGGCTGGATCAACG
CCAGCTGGATCTGGGCCTGGGGCATCTGCCTGTCCCGCTAGCAAACGATT
TTGCGGCGGCTTCATGGCGGCTTCCCAGGCGCAGGCAGCGTCAGCTTCCA
CGGTCACCGCCGCGCCGTCGCTGCCGGCTGAGCACTTCCTGAATGAAGCA
GGGAGGGAGGTTACAAGGTATGGGGTGGCTAGCGGGTTGGCGATGGAAGA
GGCACAGGAGAGCGGCAAGATCCTCTACCCCGACCCGCTGGATTGGTGGC
GGATGAACGCCGTCAAATTCCCGCTGCTAGCGGCTCTTGCCCGGCGCCTT
TTGGCCATACCGGCATCGCAGGCGCAGTCGGAGCGCGTGTTCTCGAGCGC
TGGGCAGATTGTCACCCAAACGCGCAACCGCCTGTCATCGGAAAAGGTCG
AGCTTCTGGTGGCATTGAAGAACATTTGGAGTGTGGTGGAGGAATGGCAG
CAGTCGAAGGCGACCCCTGTGTGA
back to top