mRNA_F-serratus_M_contig9.20338.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 236 bits (602), Expect = 3.190e-68 Identity = 151/337 (44.81%), Postives = 197/337 (58.46%), Query Frame = 3
Query: 342 QRHPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDV---ERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGST--------PAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESG---KILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
+ HPLL DW VL L+EP+L PFM QK LE + VTGS+ + + LR GL+ + KA+ Q G A + P EAL DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+ EH GVW+AVA AA DIA A + A + ++ P G G GAS P F AA + E + EV+ + A G+ + + Q++ K ++ +PLD WR +++PLLAALARR+LAIP+SQAQSERVFS+AG VT TR+RL E VELLV L+N+W VV+EW++S
Sbjct: 224 EVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQ--QGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAF--EAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 198 bits (503), Expect = 5.370e-54 Identity = 132/288 (45.83%), Postives = 167/288 (57.99%), Query Frame = 3
Query: 351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNH-GASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRM-TALSAAGSTPAGS---GPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPA--EHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERV 1190
P+L DW VL L+EP+L PFM QK LE + VTGS+ VP I LR GL+ L+ + G SA A +LP EAL +DF NR+GDGS IL +REG RRQPQGF+ QV ATA+DPR K LYG+ EH VW+AVA A DIA +S T+ SA + P G+ PG P R F AA+ A A +A++ +L E + EV + G+++ GK +Y DPLDWWR ++FP LAALARR+LAIP+SQA SERV
Sbjct: 263 PVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARL-SAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.330e-45 Identity = 130/353 (36.83%), Postives = 177/353 (50.14%), Query Frame = 3
Query: 351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQAS--------------------------------------------VRMTALSAAGSTPAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKN 1274
PLL DW VL+L+E +L PFM QK LE S VT LV P I +L+ GLD + LQ + A ++V A+ ++ C +AL D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+ EH VW A A A +A +A+ T + A S+P P A A + A+ S + REV + + GLA+ +E G+ + PL+WWR+ A ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+ E V L+V L+N
Sbjct: 192 PLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEP-AXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSW-EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 158 bits (400), Expect = 2.040e-41 Identity = 106/262 (40.46%), Postives = 140/262 (53.44%), Query Frame = 3
Query: 600 DFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASACPASK-------------------------RFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGR-EVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
DF NR+GDG +IL ++EG RRQP GF+ VQV+ATALDPR K+LYGV +E VW+ V A IA T+ S S+ GP + GG + A +S V + + R E+T + V++G+ M E + G +Y DPLDWWR+ FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQ------QGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFV---------RLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.050e-33 Identity = 93/201 (46.27%), Postives = 120/201 (59.70%), Query Frame = 3
Query: 351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASAC--PASKRFCGGFMAASQAQAAS 944
PLL DW VL+L+EP+L PFM QK LE S VT SLV I +LR LD + LQ + A ++V A+ +L C AL D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A +A+ T + A S+P P A+A P +R GF AS A AS
Sbjct: 164 PLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSPIPVEPAAAAAYQPRRRR---GFATASAAHGAS 360
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.350e-24 Identity = 101/319 (31.66%), Postives = 147/319 (46.08%), Query Frame = 3
Query: 351 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAGSGPGASACPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGREVTRYGVASGLAMEEAQESGKILYPDPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEW 1298
PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I +LR LD + LQ A ++V A+ KD F + + ++ +P+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A +A+ +Q+ AS+S + P+ + AS + ++ Q + NA ++ R+L IPASQ QSERVFSSAG +VT+TR R+ E VEL++ L+N+ V+ W
Sbjct: 236 PLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATED----------------------------------TQSAGASSSLIPVEPAAXXXXXXXX----XXDFAAASAVPGDKQQSA--------------NA------SSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRW 478
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 6.130e-20 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3
Query: 426 KKLESNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQ 809
K++ + VTGSLVVP I +LR L+ L + + A V A ++PC++AL D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV +E VW+ V A IA T+
Sbjct: 191 KRVIQDVVTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 7.020e-18 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query: 549 VLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAV 773
V AR ++PC++AL DF NR+GDG +IL ++EGPRRQP GF+ VQV+ATALDPR K+L+GV +E VW+ V
Sbjct: 155 VNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.350e-14 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 1119 FPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1307
FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 154 FPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME) HSP 1 Score: 75.5 bits (184), Expect = 2.130e-13 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 3
Query: 1083 DPLDWWRMNAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVAL 1268
D +DWW+ N +FP+LAA+AR+ LAIPA+Q SER+FS AG IVT TR++L E VE L L
Sbjct: 16 DIIDWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20338.1 >prot_F-serratus_M_contig9.20338.1 ID=prot_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=polypeptide|length=304bp MYVQKKLESNNVTGSLVVPLICNLRAGLDVERKALQQPNHGASAVVLAARback to top mRNA from alignment at F-serratus_M_contig9:95210..96861+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20338.1 ID=mRNA_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=mRNA|length=1652bp|location=Sequence derived from alignment at F-serratus_M_contig9:95210..96861+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:95210..96861+ >mRNA_F-serratus_M_contig9.20338.1 ID=mRNA_F-serratus_M_contig9.20338.1|Name=mRNA_F-serratus_M_contig9.20338.1|organism=Fucus serratus male|type=CDS|length=1824bp|location=Sequence derived from alignment at F-serratus_M_contig9:95210..96861+ (Fucus serratus male)back to top |