mRNA_F-serratus_M_contig889.20261.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig889.20261.1
Unique NamemRNA_F-serratus_M_contig889.20261.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 301 bits (771), Expect = 1.950e-94
Identity = 142/247 (57.49%), Postives = 177/247 (71.66%), Query Frame = 1
Query:    1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
            WTYRRT+T+G +PYGPSDW +GYPDCG  AQSPI+L A   + V+ + ++L+F+P+ C S +L F A+ERVWE+LF  CS +  + F GE YNL+QIHIHSPSEH IGGS  +AEIHWVHVKEGT D+LLVVGVL+D ++YG+NVE++ LWDVLD G  +    F T+IYD++P N VFSHY GSLTTPPCTEGV WIVM++                     + VDE GNTNRP Q LN R +F V
Sbjct:   42 WTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA)

HSP 1 Score: 244 bits (623), Expect = 2.040e-72
Identity = 125/250 (50.00%), Postives = 161/250 (64.40%), Query Frame = 1
Query:    1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKE---GTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATV---------------------DEQGNTNRPTQPLNGRDVFLV 678
            WTYRR + +G  PY PSDW  GYPDCG  +QSPINL A+  + VE+T+F+L+ F   CAS +L F AN  VWE+ F+EC+  ++LSF+G  Y+L+Q+HIHSPSEH + GSL  AEIH VH ++   GT  ELLV+GV  D  E+G NV L+PLWDVL +GA           Y+LIP +  +SHY GSLTTPPC+E V W+VM+  TV                     DE+ NTNRP Q +NGR V++V
Sbjct:   49 WTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGV---INPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.180e-71
Identity = 119/247 (48.18%), Postives = 152/247 (61.54%), Query Frame = 1
Query:    1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
            WTYR T   G EPYGP DW  GYPDC  + Q+PIN+ A         +  + FFP  C S++L F ++  VW+V F+ C+    L + GETYNL+Q HIHSPSEH +GG+  AAEIH VH+K+ TTD LLVVG++++VS+YG NVEL+P+W+V+D     A   F    Y L+P    F+ Y+GSLTTPPCTEGV WI+M+E                     + V E G TNRP Q LNGRDV  V
Sbjct:   47 WTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.940e-43
Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 1
Query:  319 IGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
            IGGS   AEIHWVHVK GT D+LLV+GVL+D ++YG+NVE++ LWDVLD G  +    F T++YD++P N VFSHY GSLTTPPCTEGV WIVM++                     + VDE GNTNRP Q LN RD+F V
Sbjct:    2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK)

HSP 1 Score: 122 bits (307), Expect = 5.400e-28
Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1
Query:   28 GGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIA-NERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDV----LDTGAASASASFDTQIY-DLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
            G E   P +W     DC   +QSPIN+  ++ S   S Q  L      C   DL ++  N   W+V  +EC    + ++N   Y LVQ H HSPSE+ IGG    AE+H VH    +   LLV+GV++DV +YG N   +  W+     + TG +  S S     Y +++P +  + H+NGSLTTPPC+EGVTWI+M++
Sbjct:   47 GEEACSPENWYAYAEDCAGESQSPINVVQASPSTTLS-QLVLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 239          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI)

HSP 1 Score: 122 bits (305), Expect = 1.730e-27
Identity = 85/255 (33.33%), Postives = 112/255 (43.92%), Query Frame = 1
Query:   55 WLQGYPDCGLSAQSPINLE---ASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNE-CSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYD-VSEYGTNVELQPLWD-----------------------VLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEAT---------------------VDEQGNTNRPTQPLNGRDVF 672
            W   YPDC    QSPIN+     +T   +        F    C   DL + A+ + W V F+  C    +++ NG  +NL+Q H+HS SEH IGG    AEIH+VH        L VVGV+    S+   N+E    W+                       V  T ++S SA      Y ++P +  + +Y GSLTTPPC+E VTWIVM E                       VD  GN  RP QP NGR V+
Sbjct:    2 WGALYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK)

HSP 1 Score: 122 bits (305), Expect = 1.900e-27
Identity = 75/193 (38.86%), Postives = 107/193 (55.44%), Query Frame = 1
Query:   46 PSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIA-NERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDV----LDTGAASASASFDTQIY-DLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
            P +W +   DC    QSPIN+  +  S   S Q  L      C   DL ++  N   W+V  +EC    + ++NG  Y LVQ H HSPSE+ IGG    AE+H VH    +   LLV+GV++DV +YG N   +  W+     + TG +  S S     Y +++P +  + H+NGSLTTPPC+EGVTWI+M++
Sbjct:   79 PENWGEVNRDCEGENQSPINVVMAQKSKSLS-QLQLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 265          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A450XNX8_9GAMM (Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XNX8_9GAMM)

HSP 1 Score: 119 bits (298), Expect = 1.200e-26
Identity = 78/226 (34.51%), Postives = 117/226 (51.77%), Query Frame = 1
Query:   40 YGPSDWLQGYPDCGLS-AQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDT-QIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEAT--VDEQ--------GNTNRPTQPLNGRDVFLVK 681
            +GP  W +    CG    QSPI+++  T +   S   D+Q+ P       +  + N    +  F    +   L  +G+ Y L+Q+H H+PSEH IGG L + E+H VH  +    EL V+G++  + E   N  ++ +W+ +    A  + S +T  +  L+P +K F +Y GSLTTPPC+EGV W VM       +EQ        G +NRP QPLNGR +F  K
Sbjct:   38 HGPEHWGKVSAVCGSGKTQSPIDIKGQTKTGAPS--LDMQYHP----VPSINVLNNGHTIKGSFG--GEKNRLLVDGKPYKLLQLHFHTPSEHQIGGKLASMELHLVH--QNADKELAVIGIM--IEEGKENKAIKGIWEKMPKKVAKETESHETFNVASLLPKDKTFFYYMGSLTTPPCSEGVRWFVMKTPIHFSEEQIRKFHRIIGVSNRPLQPLNGRTIFQGK 251          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A662WYL3_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYL3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 6.770e-25
Identity = 84/262 (32.06%), Postives = 125/262 (47.71%), Query Frame = 1
Query:    1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEAS--THSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGT-NVELQPLWDVLDTGAASASA-----------------SFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEA---TVDE---------------QGNTNRPTQPLNGRDVF 672
            W YR T +   E  GPSDW   YP CG S QSP+N+     +HS        L+F    C    +  + +   WE+  +E   + S++F+G +Y+L Q H+HS SEH +       E+H+VH + G +  LLV  +L +       N  +  LW+ ++TG A+                    ++   +  L+  + +F+ YNGSLTTPPC+E V W V+N     T DE                 + NRPTQPLNGR++ 
Sbjct: 2083 WGYRETTS---EELGPSDWKNSYPSCGGSHQSPVNIPVRELSHSDWGMPYAPLKF-SGDCERFTMRTLEDLYKWEINGDENCNVKSINFDGRSYSLAQFHLHSTSEHTLDDYHYDGELHFVHKEVGGSGNLLVTSLLLNAQPIEMENGFIGNLWNAMNTGDAAVDLEQIGYGCSREHALFCRINYADMLNGLVSKSHLFN-YNGSLTTPPCSEIVDWWVLNNPISITYDELKLMKSLYAKRPSANNSSDNRPTQPLNGREIM 2339          
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK)

HSP 1 Score: 115 bits (287), Expect = 7.170e-25
Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 1
Query:   46 PSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVK-EGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTG------AASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
            P +W     DC  ++QSPIN+  ++ S+  S    LQ      + + +  I N   W+V    C      ++ G  Y L+Q H HSPSE+ IGG    AE+H VH   EG   ELLV+GV++DV +YG N      W+   +         S  ++ D    +++P    + H+NGSLTTPPC+EGVTWI+M++
Sbjct:   95 PENWDSVNDDCAGTSQSPINVVQASPSSDLS---GLQLTKAKSSCNAVYLIDNYHTWKVDMTSCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHASAEG---ELLVIGVMFDVVDYGGNHFFSQFWNNTWSDDPDWYRVVSLESNLDPYT-EILPATPSYYHWNGSLTTPPCSEGVTWILMSQ 281          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F6MHT6_SACJA1.950e-9457.49Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
A0A872YNN4_SACJA2.040e-7250.00Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
D8LB10_ECTSI2.180e-7148.18Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
Q9SMD6_9PHAE2.940e-4355.32Carbonic anhydrase alpha type (Fragment) n=1 Tax=L... [more]
A0A7S4D4V5_HETAK5.400e-2838.19Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
H6WB77_VAULI1.730e-2733.33Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]
A0A7S3XPW5_HETAK1.900e-2738.86Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
A0A450XNX8_9GAMM1.200e-2634.51Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. ... [more]
A0A662WYL3_9STRA6.770e-2532.06Carbonic anhydrase n=2 Tax=Nothophytophthora sp. C... [more]
A0A7S3XQ34_HETAK7.170e-2536.08Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig889contigF-serratus_M_contig889:105212..109156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.0
Seed ortholog evalue3.5e-62
Seed eggNOG ortholog2880.D8LB10
KEGG rclassRC02807
KEGG koko:K01672,ko:K01674,ko:K04413
KEGG ReactionR00132,R10092
KEGG Pathwayko00910,map00910
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0042597,GO:0044464
EggNOG free text desc.carbonate dehydratase activity
EggNOG OGsCOG3338@1,KOG0382@2759
EC2.7.11.1,4.2.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons8
Model size1892
Cds size687
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932583.0320113-CDS-F-serratus_M_contig889:105211..1052611622932583.0320113-CDS-F-serratus_M_contig889:105211..105261Fucus serratus maleCDSF-serratus_M_contig889 105212..105261 +
1690964377.2893424-CDS-F-serratus_M_contig889:105211..1052611690964377.2893424-CDS-F-serratus_M_contig889:105211..105261Fucus serratus maleCDSF-serratus_M_contig889 105212..105261 +
1622932583.060884-CDS-F-serratus_M_contig889:105561..1056461622932583.060884-CDS-F-serratus_M_contig889:105561..105646Fucus serratus maleCDSF-serratus_M_contig889 105562..105646 +
1690964377.3006723-CDS-F-serratus_M_contig889:105561..1056461690964377.3006723-CDS-F-serratus_M_contig889:105561..105646Fucus serratus maleCDSF-serratus_M_contig889 105562..105646 +
1622932583.081139-CDS-F-serratus_M_contig889:105823..1059071622932583.081139-CDS-F-serratus_M_contig889:105823..105907Fucus serratus maleCDSF-serratus_M_contig889 105824..105907 +
1690964377.3090658-CDS-F-serratus_M_contig889:105823..1059071690964377.3090658-CDS-F-serratus_M_contig889:105823..105907Fucus serratus maleCDSF-serratus_M_contig889 105824..105907 +
1622932583.099455-CDS-F-serratus_M_contig889:106362..1064611622932583.099455-CDS-F-serratus_M_contig889:106362..106461Fucus serratus maleCDSF-serratus_M_contig889 106363..106461 +
1690964377.3174295-CDS-F-serratus_M_contig889:106362..1064611690964377.3174295-CDS-F-serratus_M_contig889:106362..106461Fucus serratus maleCDSF-serratus_M_contig889 106363..106461 +
1622932583.1169279-CDS-F-serratus_M_contig889:106687..1068071622932583.1169279-CDS-F-serratus_M_contig889:106687..106807Fucus serratus maleCDSF-serratus_M_contig889 106688..106807 +
1690964377.3259664-CDS-F-serratus_M_contig889:106687..1068071690964377.3259664-CDS-F-serratus_M_contig889:106687..106807Fucus serratus maleCDSF-serratus_M_contig889 106688..106807 +
1622932583.1326673-CDS-F-serratus_M_contig889:107108..1072491622932583.1326673-CDS-F-serratus_M_contig889:107108..107249Fucus serratus maleCDSF-serratus_M_contig889 107109..107249 +
1690964377.334318-CDS-F-serratus_M_contig889:107108..1072491690964377.334318-CDS-F-serratus_M_contig889:107108..107249Fucus serratus maleCDSF-serratus_M_contig889 107109..107249 +
1622932583.2253253-CDS-F-serratus_M_contig889:107524..1075571622932583.2253253-CDS-F-serratus_M_contig889:107524..107557Fucus serratus maleCDSF-serratus_M_contig889 107525..107557 +
1690964377.3445706-CDS-F-serratus_M_contig889:107524..1075571690964377.3445706-CDS-F-serratus_M_contig889:107524..107557Fucus serratus maleCDSF-serratus_M_contig889 107525..107557 +
1622932583.2773693-CDS-F-serratus_M_contig889:107877..1079521622932583.2773693-CDS-F-serratus_M_contig889:107877..107952Fucus serratus maleCDSF-serratus_M_contig889 107878..107952 +
1690964377.3540478-CDS-F-serratus_M_contig889:107877..1079521690964377.3540478-CDS-F-serratus_M_contig889:107877..107952Fucus serratus maleCDSF-serratus_M_contig889 107878..107952 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932583.2980032-UTR-F-serratus_M_contig889:107952..1091561622932583.2980032-UTR-F-serratus_M_contig889:107952..109156Fucus serratus maleUTRF-serratus_M_contig889 107953..109156 +
1690964377.3627038-UTR-F-serratus_M_contig889:107952..1091561690964377.3627038-UTR-F-serratus_M_contig889:107952..109156Fucus serratus maleUTRF-serratus_M_contig889 107953..109156 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig889.20261.1prot_F-serratus_M_contig889.20261.1Fucus serratus malepolypeptideF-serratus_M_contig889 105212..107952 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig889.20261.1

>prot_F-serratus_M_contig889.20261.1 ID=prot_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=polypeptide|length=229bp
WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFD
LQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIH
SPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPL
WDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVM
NEATVDEQGNTNRPTQPLNGRDVFLVKA*
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mRNA from alignment at F-serratus_M_contig889:105212..109156+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig889.20261.1 ID=mRNA_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=mRNA|length=3945bp|location=Sequence derived from alignment at F-serratus_M_contig889:105212..109156+ (Fucus serratus male)
TGGACCTACCGCCGAACAGCCACAGACGGGGGAGAGCCTTACGGACCCAG GTACGGCCTTCTTTACAGCATTTAGTCAACCCACGAGAACAGTACCGGGG AAATAATTGTTTGTTTTTGTAGTAAAAATATCAGAGACTGCGGTGCCCTG ATGCCAGATTTGCGTACATCAAATTCCTTTAACCGAGTGGGGGGTTGATC TTCCGTAGGTAAGGACATGCGGTAGATACTGTGTTCGTGTGCTCGTTCCA CGTGCGAGTCTATACTTTAAAGTATCAAAAGATTACCTAACGTGAGTAGT GTAGGTGTACACTTAACCTGACATATCAACCGCATGTACGCTGTCCGCAG CGACTGGCTCCAGGGCTACCCGGACTGCGGTCTCAGTGCTCAGAGCCCCA TCAATCTCGAGGCTAGCACGCACTCGGCTGTAGAGGTGAGAAATATCATG TTCCATTTTAACTTACCGTGAAAAACTGCACAGACCGACTGCTCCTTCGC TCGGCGTAGATGATGGCCTCATCGCAGGCAGAAATAGAGCTGATTTCCTT CCTTGACCTGCCCTGTGGCTTGTCCCCGATACTGGTGCGTACGAACATAC ATCCGAGTGCAGTCGACCCAGTTCGACCTCCAGTTCTTCCCTCACACGTG TGCGTCGAGCGACCTGACCTTCATCGCCAACGAGCGCGTTTGGGAGGTGA GGGAAATATTTTGAACTACTCCAGTTTAAAGTTATCACAGCTGCGTCGCT TTGTGGGGTGTAATTAGGAAACAACCCATGTAGGTACTAATATGTTGTTT TTCAGGTGGCGAGGCATCACCCGCACGGCAGTGACCTGTCTAGACCTTCA CTCCAAGGTAATCTCCTCGAAGCAGAGTCCACAGGTCCCCCCTGTCGGCA TCGAGCGGAATATGCGACATCTTGAGTGCGCGAATTACTTGACCGTAAGC GGGATTTTTAGGGCATCTCCATGCAGGAAAGCGCAAGAAGACAAAACACA CGAATGGATCGTTACGGGATTCGAAGAAGAAAGACGTTCTACCATTAAGT AATAACTTTTTGAGTGCATTTTCTAACGTGTGACACTACGAGCAACACAT TAACAATTGCTTCTCTTTATCTCCTCTGGCGAAACACTGATTCCGACGCA GGTCCTTTTCAACGAATGTTCGCAGCTGGCCTCTCTAAGCTTCAACGGCG AAACATACAATCTGGTTCAGATCCATATTCATTCCCCCTCTGAGCACGCG GTAAGAACACAGATCGACACTGGGACAAGTGTTTTACACAGAGAAATACG CGCCGCGGGTAGCTCTGACGAAGTGCACGGGTAGAGCCATGTCTCCGAAG CACATATCTTGCCGCGCGCTCGAAGTCGTAAGCCCGGATTTCCATATGCC CACAACGCATCATTCCCTCTCTCATGACGATGTCTCTCTACATTGTTGAT TTCTCCGCGTTCGTCTTCCATGGCAGATTGGAGGGTCCCTTCGCGCGGCC GAGATACACTGGGTGCACGTTAAGGAAGGGACGACGGACGAACTCCTTGT GGTTGGCGTGCTCTATGACGTCAGCGAGTACGGCACCAATGTTGAGGTCC GTCCGTATGACAGATGGACTTGACTTGTGTCGCCGTCCTTCCCCGCGTGC TTAACACAGTCTGACCTGTCGAATGCGGTCGCCCGAATGTCGTTCTTTCT GGCCAAGACAAGGTCTGCACGTAAAATGGATTCGTTTTCACGTTCGCGCT AGCCCATCGTTTTGTCATCTTACAAAAAACCTTTGTTGTGTTGTGTTTGA TACACATTACTATTAATATTATAAACCTCAAAGTCGCGGTTTTCGGCTTC CGGATCCTCTGTCTCTATGTCCTGCCAATGCGCACACTATACTGCAGCTC CAGCCTCTTTGGGATGTCCTGGACACCGGTGCGGCCTCCGCGAGCGCATC ATTCGACACGCAGATTTACGACCTGATTCCACCCAACAAAGTGTTTTCCC ACTACAATGGATCTCTGACAACGCCCCCCTGTACGGAGGTGAGAGCGGTA GCTTCAGTGGCGCGAAAATAAGAAATAACGATCGGACAGGCTGCACTACT TGTGTCCGTTTGGGGGGCCCGTTTTTGTTATACAGTACTGCGCACTTTTC CTTTTGTGCCGCAGAAGCTTACATGTGCTTATTATTTCAGGGGGCTTTGT GTAGCATACAACCACAAATTTCTACTTTTTCCACGAAAGCATATATGTGA ATCAGCCAGAAAAGCTCTAGTTCTAACCTATGCCTCGCGACCGATCGTTA TTGAACGCCACAGGGCGTCACGTGGATCGTCATGAACGAGGCTACAGTCA TTAGCAAGATGCAGCTGGACGAGTTTCGCGTATGGGTCGCGCTGTTCGAC GACTCCAAGGTGTATTTCAAAATGGGGAGAGCGATGATATTATTATGCTT TAGATAATATATACATATACCTCTTGTTCTTGGGGTTATGCGATGGTGTT ACCTGTTCTATGAGGTGTAACCTGTAACACCCCGTCGTACTCGATGATAC AACCATTTCTACTGTGTTGACCATATCTCGTGTTGGGGTTGGATATCAAC TACCATGCGTGCATCCCTAATCTACGCCCTCCCGCCCCCTCGCTTGAACG TTACGGCCGCAATAAGGTCGACGAGCAAGGCAACACCAATCGTCCAACCC AGCCACTGAATGGCCGTGACGTTTTCCTCGTGAAGGCCTAGAGAGTACGC CCAGCACGCTCTGGAACTCGAGTCATTTGTCGCTGGCAGCCCCAGCGAGG TAGAAACATTTGGACGAAGGCTTGTACCGGTGGTCTAGGAAAGGGATCGC CATCGGTGCGAAGTGCTTTTTGTGTCGGTACTGTAGGAAATACTCGGAGT ATAGAGCTAAATCTTTAGCGTTGGCGGTATCTCAAGATTTACGAAGGACG GGAAGGTGCCATACAACCGTATCATCGCCCGTGATACTATATCTTGAAGG GCAACAGAAGCTCAAATGTAGACGCTTAGTTGGCATGGCACTTGAAGCAT ACTGTACGAGTACACCGTTAGAGTTATGCTGGCAGTGTTTACCATCGATA TTGAGCATTAGTTTCGTTTCATATGTTTTTGATTACTTATTTTAAAACAT CCAGGATCAAGGTTTATTTCGGGGTGAGAAGAAACCAGCCGTTTGATTAG ACAGCTGAACAAAGACAGGAATAACGTGTAGTACTCAGTGTAAGGGTTTC TCTCAGGAAACTGTCTATCGTTTTATAGTGTATTCGTCGCGTTCGGCCGG CAGTCCGCGCAAAGTATATCGTAGTCGTGGTTTCCAAACAATGACTACTG CGGTAGGCATAAAGCTAGAAGAAAGAGTGCTTGCGCACCCTCCGTTTTGG TGGTGTATTCAGACTATCCAGATCGTTAACCTGGAAGTCATCAACTGTGC GTTTCAGCCGCTAACCAGCAGTAATGATTGACGGGCGTAGAGTTGCAGCG TGGAAGCCTGGACAGGCCACTTTCCCTACCATGTAAGGTTACCATAGAGT TGTCGCCCCTCAGTATAATGATATTAGGGTTCTCTACTTTCCGAGGATGT CCGGTCGCCCCGGTGCCCGATTCGGTTGTCAGCGAAGCTCGATCACTCTA CCTGGCGTGAAGACTTACCTTAACTTATCCATTTCTGCTGGGCTTAACTA AAAGGTATATACTAGACTACTGGAGTAGTTCTGGGTGTTAAACTAGTGTA TGCATGTAAGGAGTCAATGCGTTTGTTTGTAGACAGTTCTTGGTTGGAAT TATATTATTAAAGTGGGCCAACCGGTGTGATTTGTTCGGACTGAAGCCAC AATGAGGTCTGAGTCTCCAGGCCTTGAGATACGTTTGTTCTTGTTGTTTC CTACATTCAGCGTGTTGGTTGTCAAATCGAAAATGACTACTTTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig889:105212..109156+

>mRNA_F-serratus_M_contig889.20261.1 ID=mRNA_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig889:105212..109156+ (Fucus serratus male)
TGGACCTACCGCCGAACAGCCACAGACGGGGGAGAGCCTTACGGACCCAG
TGGACCTACCGCCGAACAGCCACAGACGGGGGAGAGCCTTACGGACCCAG
CGACTGGCTCCAGGGCTACCCGGACTGCGGTCTCAGTGCTCAGAGCCCCA
TCAATCTCGAGGCTAGCACGCACTCGGCTGTAGAGCGACTGGCTCCAGGG
CTACCCGGACTGCGGTCTCAGTGCTCAGAGCCCCATCAATCTCGAGGCTA
GCACGCACTCGGCTGTAGAGTCGACCCAGTTCGACCTCCAGTTCTTCCCT
CACACGTGTGCGTCGAGCGACCTGACCTTCATCGCCAACGAGCGCGTTTG
GGAGTCGACCCAGTTCGACCTCCAGTTCTTCCCTCACACGTGTGCGTCGA
GCGACCTGACCTTCATCGCCAACGAGCGCGTTTGGGAGGTCCTTTTCAAC
GAATGTTCGCAGCTGGCCTCTCTAAGCTTCAACGGCGAAACATACAATCT
GGTTCAGATCCATATTCATTCCCCCTCTGAGCACGCGGTCCTTTTCAACG
AATGTTCGCAGCTGGCCTCTCTAAGCTTCAACGGCGAAACATACAATCTG
GTTCAGATCCATATTCATTCCCCCTCTGAGCACGCGATTGGAGGGTCCCT
TCGCGCGGCCGAGATACACTGGGTGCACGTTAAGGAAGGGACGACGGACG
AACTCCTTGTGGTTGGCGTGCTCTATGACGTCAGCGAGTACGGCACCAAT
GTTGAGATTGGAGGGTCCCTTCGCGCGGCCGAGATACACTGGGTGCACGT
TAAGGAAGGGACGACGGACGAACTCCTTGTGGTTGGCGTGCTCTATGACG
TCAGCGAGTACGGCACCAATGTTGAGCTCCAGCCTCTTTGGGATGTCCTG
GACACCGGTGCGGCCTCCGCGAGCGCATCATTCGACACGCAGATTTACGA
CCTGATTCCACCCAACAAAGTGTTTTCCCACTACAATGGATCTCTGACAA
CGCCCCCCTGTACGGAGCTCCAGCCTCTTTGGGATGTCCTGGACACCGGT
GCGGCCTCCGCGAGCGCATCATTCGACACGCAGATTTACGACCTGATTCC
ACCCAACAAAGTGTTTTCCCACTACAATGGATCTCTGACAACGCCCCCCT
GTACGGAGGGCGTCACGTGGATCGTCATGAACGAGGCTACAGGCGTCACG
TGGATCGTCATGAACGAGGCTACAGTCGACGAGCAAGGCAACACCAATCG
TCCAACCCAGCCACTGAATGGCCGTGACGTTTTCCTCGTGAAGGCCTAGG
TCGACGAGCAAGGCAACACCAATCGTCCAACCCAGCCACTGAATGGCCGT
GACGTTTTCCTCGTGAAGGCCTAG
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