mRNA_F-serratus_M_contig888.20253.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 530 bits (1366), Expect = 9.980e-171 Identity = 275/455 (60.44%), Postives = 324/455 (71.21%), Query Frame = 1
Query: 286 EDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFMS--------STFASADETLPPL 1623
E GC T+TDLYN R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+P Y GRSF+NCVSE + E C GQ QN+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSD P D SDGRPSDN F +N I N G+KI E DDTVIT N FTGTS EF DAQ+T W NT +C KN S STF LP L
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 526 bits (1356), Expect = 2.660e-164 Identity = 261/463 (56.37%), Postives = 321/463 (69.33%), Query Frame = 1
Query: 232 KASTRWASATGLNGRIYLEDGGCGTMTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFMSSTFASADETLP 1617
+ S R+A+++G+ GR+Y E GC TMTDLYN R E+DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YENGRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSD PD S DGRPS N N + + G+KI E DD NTF FEF ++ +T+WS N D C + AS +++P
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIP 883
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 3.070e-156 Identity = 255/457 (55.80%), Postives = 313/457 (68.49%), Query Frame = 1
Query: 286 EDGGCGTMTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFMS--------STFASA 1602
E GC T+TDLYN R E+DG + KGP+Y+LD + + +PTSVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G +ND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY +A GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F +N ++N+ G+K +D+ V+T N FTGT EF DAQ T WS N+ S +C N S STF+S+
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDDGNSVPPSTFSSS 457
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 2.410e-147 Identity = 235/448 (52.46%), Postives = 299/448 (66.74%), Query Frame = 1
Query: 286 EDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFMSSTFASADETLPPLC 1626
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT+DLFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + P + Y++GRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY+NTI TETG+KI E+D+ IT N F+GT+ EF +A D VWS N+ ++ C ++ +++ + LP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 426 bits (1096), Expect = 5.740e-134 Identity = 209/348 (60.06%), Postives = 249/348 (71.55%), Query Frame = 1
Query: 307 MTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 1323
MTDLYN R E DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 430 bits (1106), Expect = 7.290e-129 Identity = 230/459 (50.11%), Postives = 296/459 (64.49%), Query Frame = 1
Query: 271 GRIYLEDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSL---FEFKDAQDTVWSSNTFKDADSDLCYKNFMSSTFASADETLPPLC 1626
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ S TG WLL D+ V +GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD L IA GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P+AS D G DN+F++NT+ E G+KI +A+ V T N F S + F+D +D VW++N D D+C K + + + ++LP LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 9.410e-127 Identity = 233/419 (55.61%), Postives = 275/419 (65.63%), Query Frame = 1
Query: 370 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFMS--------STFASA 1602
+LDD+ + + SPTSVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G+ +ND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX GG +AVGIFLHRSSD+ EVY G DAPD S+ GRP+ N+F +N I+NT G+KI +D+ VI+ N FTGT EF DAQ T WS N+ S +C N S STF+S+
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDDGNSVPPSTFSSS 360
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 2.400e-125 Identity = 223/431 (51.74%), Postives = 282/431 (65.43%), Query Frame = 1
Query: 280 YLEDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYSNTISNT--ETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNT 1539
Y E GGCGT+T +Y ++ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N + +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+ GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD PD +S+GRPSDN F NTI G+ I E D V N FTG S +EF+D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 4.370e-114 Identity = 217/445 (48.76%), Postives = 266/445 (59.78%), Query Frame = 1
Query: 292 GGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYS---PTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDE--TCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1536
GGC T+TD+YN++ S GP+Y+LD +++I+ S TG WLLTS L +L G Y GTS GGD D LRIQST DF E+RG GGSL F T VTSWDT +YE GRSFINCV++++ + +C G+ + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYG QGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A+MESF A+I+DNT N KYGIR+SLG +N+++DN FD S YGLYTY+GSD PD S +DGR DNSF +NTISNT+ MKI E DD T N F FEF+D+ DTVW++N
Sbjct: 413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 372 bits (956), Expect = 8.840e-112 Identity = 230/519 (44.32%), Postives = 293/519 (56.45%), Query Frame = 1
Query: 124 AHSALASVLLAVLGSSWDKVVA----ANDIMTIPDQCTGTKASTRWASATGLNGRIYLED------GGCGTMTDLYNSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTF-TGTS---LFEFKDAQDTVWSSNTFKDADSDLCYKNFMSSTF-ASADETLPPLC 1626
A S+ LL +L S+ A ND ++ PD + + S R+A T R+YLE GGC T+ ++ SR K P+Y +D D+ D+ + T G WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP +D +GRS+I+ VSE + DETCEG +N GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD PD S GR +N F N+ S E +KI EAD T N F G + + F DA ++V NT D + D K S F +D P+C
Sbjct: 8 ATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTK---RLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLD-EGDFELKVTNDSCFDGESDSGYEPVC 512 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig888.20253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig888.20253.1 >prot_F-serratus_M_contig888.20253.1 ID=prot_F-serratus_M_contig888.20253.1|Name=mRNA_F-serratus_M_contig888.20253.1|organism=Fucus serratus male|type=polypeptide|length=506bp MASVAHSALASVLLAVLGSSWDKVVAANDIMTIPDQCTGTKASTRWASATback to top mRNA from alignment at F-serratus_M_contig888:159570..167870- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig888.20253.1 ID=mRNA_F-serratus_M_contig888.20253.1|Name=mRNA_F-serratus_M_contig888.20253.1|organism=Fucus serratus male|type=mRNA|length=8301bp|location=Sequence derived from alignment at F-serratus_M_contig888:159570..167870- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig888:159570..167870- >mRNA_F-serratus_M_contig888.20253.1 ID=mRNA_F-serratus_M_contig888.20253.1|Name=mRNA_F-serratus_M_contig888.20253.1|organism=Fucus serratus male|type=CDS|length=3036bp|location=Sequence derived from alignment at F-serratus_M_contig888:159570..167870- (Fucus serratus male)back to top |