mRNA_F-serratus_M_contig853.19935.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig853.19935.1
Unique NamemRNA_F-serratus_M_contig853.19935.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: D7G915_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G915_ECTSI)

HSP 1 Score: 931 bits (2406), Expect = 0.000e+0
Identity = 460/537 (85.66%), Postives = 492/537 (91.62%), Query Frame = 1
Query:  262 MSAKQLGGEGAMHAQNREEKVGLLRKVTPVHAGPLRRRTRFFKAQHYFEIRSSVLLLYKSRKRSSNPGFLESLFSKSTEGDVIDSEIVQAASSQGQWDAAFDMSGAKITVFSPDEKVG-SFPFRISFEGIFILSVSVVDSCDKDSPQRSLYLMAPTAESRSQWVHHCNRAARTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLPYGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIRDNYDE-HVTEDK 1866
            M+AK + G G +HAQ +EEK+GLLRKV PVH+GPLRRRTRF KA HYFEIRSSVLLLYKSR + +NPGFLESLFSKS + D IDSEI+QAASS+GQWDAAFDMSGAK+T  S DEK G SFPFRISFEGIF+LSVSV+D+CDKDSPQRSLYL A +AESRS+W+HHC RAAR+LSRADFEPLKTVGKGQWGKVFLVRK SGPVAGRAA DPGLV    G++ VELLALKEVQLG+NTNI+HVQNERLIMQAVPPH FVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRK+RN+RTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRT+SFCGTEAYLAPEMILRLPYG+SVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPE AK ITGALLQV E RRLGCGK FAAWDDVK NGFFANTDWEALA KKT PPVLPA+PGK+MVNNFDDDFT Q VFWGNDVDANG  PVFYEGELEGFSFIR+N++E    EDK
Sbjct:    1 MTAKAMQGTGTLHAQMQEEKIGLLRKVAPVHSGPLRRRTRFLKALHYFEIRSSVLLLYKSRSKRANPGFLESLFSKSGDADSIDSEIIQAASSRGQWDAAFDMSGAKVTALSADEKGGNSFPFRISFEGIFVLSVSVIDACDKDSPQRSLYLTAASAESRSEWLHHCTRAARSLSRADFEPLKTVGKGQWGKVFLVRKTSGPVAGRAAADPGLVT---GTDNVELLALKEVQLGSNTNINHVQNERLIMQAVPPHQFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKHRNRRTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTSSFCGTEAYLAPEMILRLPYGSSVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEAAKDITGALLQVTEARRLGCGKDFAAWDDVKRNGFFANTDWEALALKKTTPPVLPADPGKDMVNNFDDDFTNQAVFWGNDVDANGASPVFYEGELEGFSFIRNNFNEVEGNEDK 534          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A835Z095_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z095_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 1.150e-173
Identity = 279/534 (52.25%), Postives = 354/534 (66.29%), Query Frame = 1
Query:  325 GLLRKVTPVHAGPLRRRTRFFKA----QHYFEIRSSVLLLYKSR----------------KRSSNPGFLESLFSKSTEGDVIDSEIVQAASSQG----------QWDAAFDMSGAKITVFSPDEKVGSFPFRISFEGIFILSVSVVDSCDKDSPQRSLYLMAPTAESRSQWVHHCNRAARTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLPYGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPV-FYEGELEGFSFIR 1833
            GLL ++ P   G LRRRTRF ++       FEIRS++L+LYK R                  SS+ GFL+++FS++T  D+       + ++ G           W+  FD++GA +     D+K  ++PF+I+F G+             D  + +L L A T + R+ W+     A++ + R DF  LKTVG+GQWGKVFLV+K SG VA R        +  +GS + E+LALKEV L   TNISHVQNERLIM+AVPPH F+V M YAFR+ RFLYYALDFMNGGDLFRHWR++R++R +MAPFYA+EVLLALEHLH H VIYRDLKPENVLLD  GH++LADLGLAK+L+ K  RT SFCGTEAYLAPEM+LR+PY  SVDFWQYGCF++ELYAGRSPFWLPRKPRK IR+NILNG FAYPS VPE  K +  +LL + E  R+G      AW+ VKA  FF  T+W  L  K+  PP++P +PG + VNNFD+DFT Q   WG   D  G+  V  +E EL GF+F+R
Sbjct:   42 GLLARMAPTCRGSLRRRTRFTRSWRSDSDVFEIRSTMLVLYKRRGSXXXXXXXXXXXXAGHTSSSIGFLDAIFSRATVADLDGGGSTGSLAASGAHESEEPNAGNWNCVFDLTGATVAALGGDDKPKAYPFKITF-GVG----------GGDGERGALNLCAETEQQRAAWLKAIEVASKGVRREDFHLLKTVGRGQWGKVFLVKKTSGIVAVRLPTATPYPHGSNGSRE-EILALKEVALSTKTNISHVQNERLIMEAVPPHEFIVNMQYAFRSGRFLYYALDFMNGGDLFRHWRRHRDRRNDMAPFYAAEVLLALEHLHAHNVIYRDLKPENVLLDDVGHVKLADLGLAKMLRDKSGRTTSFCGTEAYLAPEMVLRIPYAYSVDFWQYGCFLFELYAGRSPFWLPRKPRKVIRDNILNGSFAYPSSVPEAVKPLINSLLNINENHRMGSSPDSDAWETVKAQSFFEGTNWARLNTKQEVPPIVPEDPGPQQVNNFDEDFTSQVPTWGEHPDGPGNDSVNAFEEELLGFNFVR 563          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: D7G1Z6_ECTSI (AGC family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z6_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.370e-74
Identity = 206/625 (32.96%), Postives = 279/625 (44.64%), Query Frame = 1
Query:  328 LLRKVTPVHAGPLRRRTRFFKAQH--YFEIRSSVLLLYKSRKRSSNPGFLESLFSKSTEGDVIDSEIV----------QAASSQGQWDAAFDMSGAKITVFSPDE-KVGSFPFRISFEGIFILSVSVVDSCDKDSPQRSLYLMAPTAESRSQWVHHCNRAARTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAG----------RAAQDPG-----------------------------LVNTVDGSNK------VE-------------LLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRT-EMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVD--RTNSFCGTEAYLAPEMILRLPYGASVDFWQYGCFVYELYAGRSPFWLPRK--PRKFIREN---ILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGC--------------------------------GKGFAA---------WDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPV---FYEGELEGFSFIR 1833
            +L  V P   G LRRR RF K +   YFE+RS+ LL +   K   N G                               +A +  +W  + D+ GA+  V  P   K  +F F + F               +D  +++L L APTA  R +W+   ++A R +   +FEPL  +G+G +  +    +  G   G          +A  D                               + NT   S+       VE              LA+KEV L   T++  V NER I+  +  HPFVV +  A+R   +LYY LDF+ G DLF  +R+N  K   + A  Y  +V LALEHLH H + YRDLKPEN+L+D++GH+ LAD+GL+K+L +  +  RT + CGT AYLAPEM+LR PYG SVDFWQ+GCFVYELYAG SPFW PR   P +   +    IL G   +P  +   AK +   LL      RLGC                                G G  A         W  VK +GFF + DWEAL       P+ PA  G+ MV NF  ++T+Q   WG D     D       ++ EL GF F+R
Sbjct:  127 VLAGVAPSCFGKLRRRGRFSKWRESVYFELRSTALLAFTDNKPGKNTGTTAGAXXXXXXXXXXXXSFACLAAKIMHPRHSAHAGVEWGWSMDLCGAERVVELPGSTKKDTFAFAVEFPA-------------RDR-KKTLVLAAPTAVDRERWMAAMDKAKRCVHAENFEPLSVIGEGHFATIDEGAEEGGGREGGGYAIGEDVDKARADEAETDAXXXXXXXXXXXXXXXXXXXXXXANTIANTKPASSSKYSDRTVEDSISRSGRHGCDRYLAVKEVALHKGTSLPGVLNERQILGVLQEHPFVVTLRCAWRRGNYLYYGLDFLPGADLFELFRRNAIKMDLQSARVYGGQVALALEHLHNHGICYRDLKPENILVDAKGHLCLADMGLSKILGTGENAVRTMTVCGTRAYLAPEMVLRKPYGLSVDFWQFGCFVYELYAGHSPFWKPRSGPPGRSHDQTVALILAGEIHFPRSIGPVAKALIKDLLGKEVEARLGCRPSSPSXXXXXXXXXXXXXXXXXXXXXXXXXRGPGTLAARPAAAAGGWLSVKQHGFFKDMDWEALLRGDVAAPIKPAGMGRSMVGNFAREYTRQRAGWGGDQQELRDVAEKEGLFKRELMGFDFVR 737          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A836CNX9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX9_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.160e-73
Identity = 190/558 (34.05%), Postives = 261/558 (46.77%), Query Frame = 1
Query:  328 LLRKVTPVHAGPLRRRTRFFKAQ-----HYFEIRSSVLLLYKSRKRSSNPGFLESLFSKSTEGDVIDSEIVQAASSQGQWDAAFDMSGA-KITVFSPDEKVGSFPFRISFEGIFILSVSVVDSCDKDSPQRSLYLMAPTAESRSQWVHHCNRAARTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWR-KNRNKRTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMI------LRLPYGASVDFWQYGCFVYELYAGRSPFW----------LPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGC---------------GKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGD---CPVFYEGELEGFSFIRDNYDEHVTEDKLEIS 1878
            +L +  P   G LRRR R F +       + E+R +VL++YKS+      G L SL S  +   V                A  D++G   I       + G +PF I   G  +                +L+L A  +++R+ W+   NRA    +  D   L T+G+G +GKV L ++      GR           DG     LLALKE+QL     +     ER+++ ++P HPFV+ +  AFR   +LYY  DFM G D+F   R K+      +A FY S+V  AL HLH H ++YRDLKPENVL+D  G++ LAD+GLAK L  +   T + CGT  YLAPEMI      +R+ YG S+DFWQ GC VYELYAG SPFW            R         IL G F  P  +   A  +  ALL      RLG                G G   W DV+A+ FF   DW+A+  K  RPP  P +  K +V NF+   T +P +WG + +A          +  EL GF+F+R          + EI+
Sbjct:   13 MLARTLPSAEGQLRRRRRGFPSTWRTTAEHVELRGTVLVIYKSKG-----GGLRSLSSSKSSRRV----------------ALHDIAGTGAIRANDAATRKGFYPFSIDVPGGTL----------------TLHLAASNSDARANWLKELNRARVVFTHNDLTILSTIGEGHFGKVVLAQRKG--CTGR-----------DG-----LLALKEIQLTPGMQLHTALTERVLLASLPLHPFVITLQLAFRYDNYLYYGFDFMPGADMFELIRRKDMRMNLPIARFYISQVASALSHLHAHNIVYRDLKPENVLVDKVGNLCLADMGLAKRLP-RDGLTYTVCGTRDYLAPEMIEEGRSNVRIGYGLSIDFWQLGCMVYELYAGHSPFWSASHGDCRDDTARPGSGATAARILGGDFKRPRGMEPAAWSLAQALLSQSPAERLGTIASGPRRPSSDVTTVGGG---WGDVRAHAFFEGVDWDAVLRKSVRPPYKPLSTRKSLVANFNAQITARPAWWGAEDEAAARQHRWEQLFTEELRGFAFVRAQPPPQAEPKQAEIA 511          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: M4C181_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C181_HYAAE)

HSP 1 Score: 256 bits (653), Expect = 2.380e-72
Identity = 152/385 (39.48%), Postives = 220/385 (57.14%), Query Frame = 1
Query:  691 SPQRSLYLMAPTAESRSQWVHHCNRAA-RTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTEMAP-FYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLP--YGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIR 1833
            S + ++Y  A T + R+++         R LS  +F   K +G+G +G+V L                   + VD     +L A+KE++LG       V  ER +M+    HPFV+G+ YA    R ++    FM GGDLF H R +     E A  FYA+E+LLALEH+HK  +++RD+KPENVLLDS+GHI+LAD+GLAK L S+ +RT + CGT+ YL PEM  R P  +G SVD WQ+GC ++ELY G  PF+LP+  RK +R+ IL     YP+ +    K +  ALL+  +  RLG   G +   D+KA+ FFA  DW+ +  ++  PP++P  PGKE+V NFD  FT QP    + + A  +    +E +  GF ++R
Sbjct:  105 SSRSTIYFAADTEKDRAKFAAQIAAVQHRKLSLDEFTTHKLLGRGHYGRVVLA-----------------YHVVDR----QLYAIKEMKLG-QVRTKVVFAERAVMEWAGDHPFVMGLEYALARGRSVFLISKFMQGGDLFLHMRNSGGSFHEGAVRFYAAELLLALEHMHKMRILHRDIKPENVLLDSEGHIKLADMGLAKRLASRAERTKTACGTDMYLPPEMAGRHPGGHGLSVDLWQFGCILFELYTGYPPFFLPQSSRKSLRQRILYQPVRYPTDMSSELKSLVTALLEKRQEDRLGYDAGIS---DIKAHEFFAGLDWDLVYQRQLEPPLVPGPPGKELVANFDVQFTDQP----HTIYAPEEIASCFERDFVGFDYVR 460          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A485LK97_9STRA (Aste57867_22519 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK97_9STRA)

HSP 1 Score: 254 bits (649), Expect = 5.250e-72
Identity = 153/388 (39.43%), Postives = 218/388 (56.19%), Query Frame = 1
Query:  688 DSPQRSLYLMAPTAESRSQWVHHCNRAARTL-SRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISH--VQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTE-MAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRL--PYGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIR 1833
            +S + ++ L A + + R+++V HC+   R + S  DFE LK +GKG +G+V L R+                          L A+KE++ G    + H  +  ER++M+ V  HPFV+G+  AF + R LY    FM GGDLF H + +     E +  FYA+EV+ AL HLH   +++RD+KPENVLLD  GHI+LAD+GL+K L++K  RT + CGT+AYL PEM+ R    +G  VD WQ GC +YEL +G  PF+LP+  +K   + IL     Y S +    + +  ALL+    RRLGC  G A   DVK + +F  T+W+ +  K+T PP+LP   G + VNNFD  FT+Q      D D N D  V    E  GF ++R
Sbjct:  101 ESGRGAVTLAADSEKDRAKFVRHCHAVQRDVPSPKDFETLKLIGKGHYGRVILARRHG-----------------------TLFAIKEMKAGV---VKHKVIHTERMVMEWVADHPFVLGLDVAFSSGRSLYLISKFMPGGDLFLHMQNHGGSFPESIVKFYAAEVVAALAHLHSMHILHRDIKPENVLLDVDGHIKLADMGLSKRLETKHGRTKTMCGTDAYLPPEMVSRTLQGHGLQVDMWQLGCLLYELRSGYPPFYLPQSKQKHTHQRILFQSPKYTSPISPEFQDLLTALLEKDPARRLGCANGIA---DVKDHPWFKGTNWDKVLKKETVPPILPKPAGDDYVNNFDPQFTEQSH--SLDDDKNPDI-VNLAKEFAGFDYVR 456          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A1V9YLI1_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLI1_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.570e-71
Identity = 149/398 (37.44%), Postives = 220/398 (55.28%), Query Frame = 1
Query:  718 APTAESRSQWVHHCNRAARTL-SRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTE-MAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLP--YGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEG-ELEGFSFIRDNYDEHVTEDKLEIS*CTTTL 1896
            A + + R+++V H +   R   S  DFE LK +GKG +G+V L  KA G                      EL A+KE++ G       +  ER++M+ V  HPFV+G+ YAF + R L+    FM GGDLF H + +     E +  FYA+E+++ LEHLH+  +++RD+KPENVLLDS GHI+LAD+GL+K L+S   RT + CGT+ YL PEM+ R P  +G  VD WQ GC +YEL +G  PF+LP+  +K   + IL     + + +    + +  +LL+    +RLG   G A   ++KA+ +F  TDW+ +  K+T PP++P   G ++VNNFD  FT+ P    +D     D   F    E  GF ++R    E   E  L+ +  T  L
Sbjct:  109 ADSEKDRAKFVTHAHAVQRRAPSPKDFETLKLIGKGHYGRVILA-KAHG----------------------ELYAIKEMKAG-QVKPKVIHTERMVMEWVADHPFVLGLDYAFSSGRSLFLVSKFMPGGDLFLHMQNHGGSFAEHVVKFYATELVVGLEHLHRMHILHRDIKPENVLLDSDGHIKLADMGLSKRLESPHARTKTMCGTDTYLPPEMVSRSPQGHGLQVDMWQLGCLLYELRSGYPPFYLPQSKQKHTHQRILFQSPKFTTAISADFQDLLTSLLEKDPSKRLGHSNGIA---ELKAHPWFNGTDWDRVLRKETAPPIVPKPAGDDLVNNFDPQFTELPHTLDDDSSNAKDDSFFSAAKEFAGFDYVRPGLKEPGAESALDAAMVTLNL 479          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: H3GZU8_PHYRM (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GZU8_PHYRM)

HSP 1 Score: 253 bits (646), Expect = 5.940e-71
Identity = 151/388 (38.92%), Postives = 223/388 (57.47%), Query Frame = 1
Query:  688 DSPQRSLYLMAPTAESRSQWVHHCNRAA---RTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTEMAP-FYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLP--YGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIR 1833
            +S + S+Y  A T + R+++   C  AA   R  + ++F  LK +G+G +G+V L    S   A R                 +L A+KE++LG       V  ER +M+ V  HPFV+G+ YA    R ++    FM GGDLF H + +     E A  FYA+E+LLALEH+H  C+++RD+KPENVLLDS+GHI+LAD+GLAK L+S+  RT + CGT+ YL PEM+ R P  +G  VD WQ+GC ++EL AG  PF+LP+  +K   + IL     YP+ +    K +  ALL+  +  RLG   G A   D+KA+ FFA  +W+ +  ++  PP++P  PG  +V NFD  FT+QP    + + A  +    +E +  GF ++R
Sbjct:  104 ESGKGSIYFAADTEKDRAKFA--CQAAAVQHRMPALSEFTTLKLLGRGHYGRVIL----SSYAADR-----------------QLYAIKEMKLG-QVKAKVVFAERAVMEWVGDHPFVMGLDYALARGRSVFLISKFMQGGDLFLHMQNSGGSFKEDAVRFYAAELLLALEHMHNMCILHRDIKPENVLLDSEGHIKLADMGLAKRLESRTGRTKTMCGTDTYLPPEMVGRYPGGHGLPVDLWQFGCILFELRAGYPPFYLPQSSQKSTHQRILYQPVRYPNNMSPELKSLLVALLEKRQEDRLGYRGGIA---DIKAHEFFAGVNWDQVLKRQLEPPLVPGPPGDSLVANFDPHFTEQP----HTIYAPEELASCFERDFAGFDYVR 460          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A3F2RD09_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RD09_9STRA)

HSP 1 Score: 251 bits (642), Expect = 7.490e-71
Identity = 151/419 (36.04%), Postives = 232/419 (55.37%), Query Frame = 1
Query:  688 DSPQRSLYLMAPTAESRSQWVHHCNRAARTL-SRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNK-RTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLP--YGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIRDNYDEHVTEDKLEIS*CTTTLAGHRSDGTPKKE 1932
            +S + ++Y  A T + R+++          + S +DF  LK +G+G +G+V L   A+                       +L A+KE++LG       V  ER +M+ +  HPFV+G+ YA    R +Y    FM+GGDLF H + +    R +   FYA+E+LLA+EH+H  C+++RD+KPENVLLD +GHI+LAD+GLAK L+S+  RT + CGT+ YL PEM+ R P  +G  VD WQ+GC ++EL AG  PF+LP+  +K   + +L     YP+ +    K +  ALL+  +  RLG   G A   D+KA+ FFA  +W+ +  ++ +PP++P  PG+++V NFD  FT+QP    + + A  +    +E +  GF     +YD   T +  E S       GH  D  P+ E
Sbjct:  104 ESGKGAIYFAADTEKDRAKFASQAAAVQHRMPSLSDFTTLKLLGRGHYGRVILSSYAADQ---------------------QLYAIKEMKLG-QVKAKVVFAERSVMEWMGDHPFVMGLDYALARGRSVYLISKFMSGGDLFLHMQNSGGSFREDAVRFYAAELLLAIEHMHNMCILHRDIKPENVLLDHEGHIKLADMGLAKRLESRAGRTKTMCGTDTYLPPEMVGRYPGGHGLPVDMWQFGCILFELRAGYPPFYLPQSSQKSTHQRVLYQPVRYPNNMSPELKSLLMALLEKRQEDRLGYCGGIA---DIKAHEFFAGVNWDQVMRRQLKPPIVPGPPGEDLVANFDPHFTEQP----HTIYAPEELASCFERDFAGF-----DYD---TSEGTESSAVHANQGGH-DDEKPEVE 484          
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Match: A0A662YHG8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHG8_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.410e-70
Identity = 146/388 (37.63%), Postives = 223/388 (57.47%), Query Frame = 1
Query:  688 DSPQRSLYLMAPTAESRSQWVHHCNRAA---RTLSRADFEPLKTVGKGQWGKVFLVRKASGPVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQAVPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNK-RTEMAPFYASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVDRTNSFCGTEAYLAPEMILRLP--YGASVDFWQYGCFVYELYAGRSPFWLPRKPRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWDDVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWGNDVDANGDCPVFYEGELEGFSFIR 1833
            +S + ++   A + + R+++   C  AA   R  S  DF  LK +G+G +G+V L R                     G+   +L A+KE++L +      V  ER +M+ V  HPFV+G+ YA    R ++    FM+GGDLF H + +    R +   FYA+E+LLALEH+H  C+++RD+KPENVLLD +GHI+LAD+GLAK L+S+  RT + CGT+ YL PEM+ R P  +G  VD WQ+GC ++EL AG  PF+LP+  +K   + IL     YP+ +    K +  ALL+  +  RLG   G A   ++KA+ FFA  DW+ +  ++  PP++P  PG+++V NFD  FT+QP    + + A  +    +E +  GF ++R
Sbjct:  107 ESGKGAILFAADSEKDRAKFA--CQAAAVQHRVPSLGDFTTLKLLGRGHYGRVILTR---------------------GAADKQLYAVKEMKL-SQVKAKVVFAERAVMEWVGDHPFVMGLDYALARGRSVFLISKFMSGGDLFLHMQNSGGSFREDAVRFYAAELLLALEHMHNMCILHRDIKPENVLLDHEGHIKLADMGLAKRLESRHGRTKTMCGTDTYLPPEMVGRYPGGHGLPVDLWQFGCILFELRAGYPPFYLPQSSQKSTHQRILYQPVRYPNNMSPELKSLLMALLEKRQEDRLGFRGGIA---ELKAHEFFAGIDWDRVMRRQLTPPLVPGPPGEDLVGNFDPHFTEQP----HTIYAPEELASCFERDFAGFDYVR 463          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G915_ECTSI0.000e+085.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z095_9STRA1.150e-17352.25Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D7G1Z6_ECTSI1.370e-7432.96AGC family protein kinase n=1 Tax=Ectocarpus silic... [more]
A0A836CNX9_9STRA1.160e-7334.05Kinase-like domain-containing protein n=1 Tax=Trib... [more]
M4C181_HYAAE2.380e-7239.48Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A485LK97_9STRA5.250e-7239.43Aste57867_22519 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YLI1_9STRA4.570e-7137.44Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
H3GZU8_PHYRM5.940e-7138.92Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3F2RD09_9STRA7.490e-7136.04Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662YHG8_9STRA2.410e-7037.63Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig853contigF-serratus_M_contig853:297031..307318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score935.6
Seed ortholog evalue1e-269
Seed eggNOG ortholog2880.D7G915
KEGG koko:K13303
KEGG Pathwayko04068,ko04151,map04068,map04151
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0598@1,KOG0598@2759
Ec32 ortholog descriptionAGC-kinase, C-terminal
Ec32 orthologEc-15_002290.1
EC2.7.11.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons10
Model size2553
Cds size1620
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig853.19935.1prot_F-serratus_M_contig853.19935.1Fucus serratus malepolypeptideF-serratus_M_contig853 297292..306646 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932513.9407496-UTR-F-serratus_M_contig853:297030..2972911622932513.9407496-UTR-F-serratus_M_contig853:297030..297291Fucus serratus maleUTRF-serratus_M_contig853 297031..297291 +
1690964345.1084423-UTR-F-serratus_M_contig853:297030..2972911690964345.1084423-UTR-F-serratus_M_contig853:297030..297291Fucus serratus maleUTRF-serratus_M_contig853 297031..297291 +
1622932514.3980205-UTR-F-serratus_M_contig853:306646..3073181622932514.3980205-UTR-F-serratus_M_contig853:306646..307318Fucus serratus maleUTRF-serratus_M_contig853 306647..307318 +
1690964345.2373798-UTR-F-serratus_M_contig853:306646..3073181690964345.2373798-UTR-F-serratus_M_contig853:306646..307318Fucus serratus maleUTRF-serratus_M_contig853 306647..307318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932513.961721-CDS-F-serratus_M_contig853:297291..2977671622932513.961721-CDS-F-serratus_M_contig853:297291..297767Fucus serratus maleCDSF-serratus_M_contig853 297292..297767 +
1690964345.125485-CDS-F-serratus_M_contig853:297291..2977671690964345.125485-CDS-F-serratus_M_contig853:297291..297767Fucus serratus maleCDSF-serratus_M_contig853 297292..297767 +
1622932513.9798546-CDS-F-serratus_M_contig853:298265..2984521622932513.9798546-CDS-F-serratus_M_contig853:298265..298452Fucus serratus maleCDSF-serratus_M_contig853 298266..298452 +
1690964345.1367824-CDS-F-serratus_M_contig853:298265..2984521690964345.1367824-CDS-F-serratus_M_contig853:298265..298452Fucus serratus maleCDSF-serratus_M_contig853 298266..298452 +
1622932514.0032916-CDS-F-serratus_M_contig853:301870..3020101622932514.0032916-CDS-F-serratus_M_contig853:301870..302010Fucus serratus maleCDSF-serratus_M_contig853 301871..302010 +
1690964345.1470497-CDS-F-serratus_M_contig853:301870..3020101690964345.1470497-CDS-F-serratus_M_contig853:301870..302010Fucus serratus maleCDSF-serratus_M_contig853 301871..302010 +
1622932514.026838-CDS-F-serratus_M_contig853:302291..3023971622932514.026838-CDS-F-serratus_M_contig853:302291..302397Fucus serratus maleCDSF-serratus_M_contig853 302292..302397 +
1690964345.1571672-CDS-F-serratus_M_contig853:302291..3023971690964345.1571672-CDS-F-serratus_M_contig853:302291..302397Fucus serratus maleCDSF-serratus_M_contig853 302292..302397 +
1622932514.0532017-CDS-F-serratus_M_contig853:304324..3044091622932514.0532017-CDS-F-serratus_M_contig853:304324..304409Fucus serratus maleCDSF-serratus_M_contig853 304325..304409 +
1690964345.1722574-CDS-F-serratus_M_contig853:304324..3044091690964345.1722574-CDS-F-serratus_M_contig853:304324..304409Fucus serratus maleCDSF-serratus_M_contig853 304325..304409 +
1622932514.0769904-CDS-F-serratus_M_contig853:304760..3048271622932514.0769904-CDS-F-serratus_M_contig853:304760..304827Fucus serratus maleCDSF-serratus_M_contig853 304761..304827 +
1690964345.1827328-CDS-F-serratus_M_contig853:304760..3048271690964345.1827328-CDS-F-serratus_M_contig853:304760..304827Fucus serratus maleCDSF-serratus_M_contig853 304761..304827 +
1622932514.2416823-CDS-F-serratus_M_contig853:305387..3056251622932514.2416823-CDS-F-serratus_M_contig853:305387..305625Fucus serratus maleCDSF-serratus_M_contig853 305388..305625 +
1690964345.1920407-CDS-F-serratus_M_contig853:305387..3056251690964345.1920407-CDS-F-serratus_M_contig853:305387..305625Fucus serratus maleCDSF-serratus_M_contig853 305388..305625 +
1622932514.2918901-CDS-F-serratus_M_contig853:305885..3060671622932514.2918901-CDS-F-serratus_M_contig853:305885..306067Fucus serratus maleCDSF-serratus_M_contig853 305886..306067 +
1690964345.2004583-CDS-F-serratus_M_contig853:305885..3060671690964345.2004583-CDS-F-serratus_M_contig853:305885..306067Fucus serratus maleCDSF-serratus_M_contig853 305886..306067 +
1622932514.318381-CDS-F-serratus_M_contig853:306187..3062771622932514.318381-CDS-F-serratus_M_contig853:306187..306277Fucus serratus maleCDSF-serratus_M_contig853 306188..306277 +
1690964345.2093863-CDS-F-serratus_M_contig853:306187..3062771690964345.2093863-CDS-F-serratus_M_contig853:306187..306277Fucus serratus maleCDSF-serratus_M_contig853 306188..306277 +
1622932514.380205-CDS-F-serratus_M_contig853:306597..3066461622932514.380205-CDS-F-serratus_M_contig853:306597..306646Fucus serratus maleCDSF-serratus_M_contig853 306598..306646 +
1690964345.2225626-CDS-F-serratus_M_contig853:306597..3066461690964345.2225626-CDS-F-serratus_M_contig853:306597..306646Fucus serratus maleCDSF-serratus_M_contig853 306598..306646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig853.19935.1

>prot_F-serratus_M_contig853.19935.1 ID=prot_F-serratus_M_contig853.19935.1|Name=mRNA_F-serratus_M_contig853.19935.1|organism=Fucus serratus male|type=polypeptide|length=540bp
MSAKQLGGEGAMHAQNREEKVGLLRKVTPVHAGPLRRRTRFFKAQHYFEI
RSSVLLLYKSRKRSSNPGFLESLFSKSTEGDVIDSEIVQAASSQGQWDAA
FDMSGAKITVFSPDEKVGSFPFRISFEGIFILSVSVVDSCDKDSPQRSLY
LMAPTAESRSQWVHHCNRAARTLSRADFEPLKTVGKGQWGKVFLVRKASG
PVAGRAAQDPGLVNTVDGSNKVELLALKEVQLGANTNISHVQNERLIMQA
VPPHPFVVGMLYAFRTPRFLYYALDFMNGGDLFRHWRKNRNKRTEMAPFY
ASEVLLALEHLHKHCVIYRDLKPENVLLDSQGHIRLADLGLAKVLKSKVD
RTNSFCGTEAYLAPEMILRLPYGASVDFWQYGCFVYELYAGRSPFWLPRK
PRKFIRENILNGVFAYPSVVPEPAKGITGALLQVVEGRRLGCGKGFAAWD
DVKANGFFANTDWEALAHKKTRPPVLPANPGKEMVNNFDDDFTKQPVFWG
NDVDANGDCPVFYEGELEGFSFIRDNYDEHVTEDKLEIS*
back to top

mRNA from alignment at F-serratus_M_contig853:297031..307318+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig853.19935.1 ID=mRNA_F-serratus_M_contig853.19935.1|Name=mRNA_F-serratus_M_contig853.19935.1|organism=Fucus serratus male|type=mRNA|length=10288bp|location=Sequence derived from alignment at F-serratus_M_contig853:297031..307318+ (Fucus serratus male)
CAGATATACTGCAGCAACTACTACGAGTAACGCGTTCCCTTCTCACCACG GCGCTTTCTTGCTCCTGTACAGGAGCGATAAGTTTAACGGTCACTCTCCA TCACAACCTGTTGAAGCATATCTTGGAATCAAGCCTTCACGGTTGGCACA AGCTGTGAAAGGAGAGGCGTTCCTACAACGGTAGCTATTCTTCGTCGAAG ACGTCCAGGCTTTTAACCTAAAGTACTCCAGAAGTCATCATCCTGCCCGT GAGCAGGAAACATGTCTGCGAAGCAGCTCGGGGGGGAAGGCGCGATGCAT GCGCAGAACCGAGAGGAAAAGGTTGGACTCCTGCGGAAAGTGACCCCTGT TCATGCAGGGCCGCTGAGAAGGCGCACCCGCTTTTTCAAGGCCCAACACT ATTTCGAGATAAGGTCCTCTGTTCTTCTGCTATACAAGTCCCGAAAGCGC TCCTCCAACCCCGGCTTCCTCGAGTCCCTTTTCTCAAAATCAACAGAGGG GGACGTTATCGACTCGGAGATCGTTCAAGCTGCTTCCAGCCAAGGACAAT GGGATGCTGCATTCGATATGTCTGGTGCAAAAATAACTGTGTTTTCCCCC GATGAGAAGGTAGGCAGCTTTCCATTCCGCATATCGTTTGAGGGCATCTT CATTCTGAGCGTGTCGGTCGTCGACTCCTGCGACAAGGATAGCCCTCAAC GCAGCCTGTACCTCATGGCTCCGACCGCTGAATCTAGGTGAGGGGTTGTC GTACTATCATATGTTGATGGTACTACCCAGCCGCCCCTACTTCGTATGGA GTCGTGAGTCTACGGGGTTGGGTCATGTATTGGGGTCCAGTTGACGAACA ATCCTGGACATCAAGACTTCAACATGTATGGCCGTCACTGCCAGCACAAA CAAGTAGCCTCTTTTCTCGTACAAAATTCGAGATTTATTTTCTTCTACCA AACTGCGCATACGACGAAGTACTCGTACTCCTAGCTATGACGGGAGTATT CGAACATATGGGCTACACATTACAGGTTCTCGATGAATCTCCCGACTTGA TACCCTTTTCCACGAAGAGACGTTGCTCCCGCCTTCCTTCTACGTTGTTG TGCGGCATCCCCATCGCTGCTTTTTAGCCTTTTGCTTTCCAACTCCTCTG CAAATCTCTCTGGAAAATTGGTCGGTGGACATTTTTGCCCTTTGGGGGGT TACGCATCTCGAATACTCCGGTATTATTTTGTCAGGTCACAGTGGGTCCA CCATTGCAATCGAGCAGCGCGGACGTTGTCCAGAGCAGACTTCGAGCCGT TGAAGACAGTGGGAAAAGGACAATGGGGGAAGGTTTTTCTCGTGCGCAAG GCGTCGGGGCCGGTGGCGGGGAGGGCTGCACAAGATCCTGGTCTGGTGAA CACGGTGGACGGTTCGAACAAAGTGAGCACGCACGGTAGGCCCTAGGGTT GCATGGCCGAGACTATTAATAATATAATGGCTTTTACAGAGGGACCCGAG AATAGACCAAGCACGATGACTCATTCGTAAACTGCCGTGTCACAATCTTC AATCTTCGCAGTTTTACGGTATCAACGGAGGAAGGCATATAGATCCCTCC CGAGACGCTAAAGTTTGGAGCTCCATTTGTCCCTTTATCACACACCCTCT CCATACTCCACTAATTGCTGTACTAGCTTGACTCGCGCTGTTGCCCACTC CCAATCACACTAATTAGATCAACTATTAATACTACAGAAACTGTTAAGTG AATAAAATCAGAACGCGCCTATTCTATAGAAGTATCTTCTGGGCATCCTC CAGTCAGGAGAAAAAAACGTCAAAACATTTAGGTGGGATCATAGGCTGCA AATTTATTGTTTTACGTTTCACAACGCTCACCTATCGTCTTGCGCGGTCA AGGTGCACGTATCTGTAGTCCTAAGAACTTACATACTCTACAATGCTGTG ATGGCTAGGTATTGGGCTTTCCCATCTATAGAACCAATTGGCTGCTGTAC AGCCGATCGCCCCGGTTGCTCAGTTGGTAACCTCGAAATCTTCTGACAGG TTGGGACGTGAGTTTGATTCCCGGTAACTGGGATCTGTCCTCGTTAAAAA ATAAAAAATAAAATGCCCAAGTGGACATAACAGTCGACGAGGGAAAGGAA CGGCTGAATCCTTCTCGCGAGAAAAATTAAGGCAAGCACCGCAGAAGAAA GCTGGATGAGAAATCCTGTGCGACCGCGGCTGGTGCGTATATTACTGGGT ATAGTTGAGGCCCGATCGGTGAATGGGAAGAACACAACAACAACAACAAC GTCCAACAAGCCTGACGTCCAGAATAAATGAGAAGAAAACACTCACACAC ACACACACAAACATAAAACAGTATGACCATCACTTGTCGAGTTCTTACCG TCGGGACCGATGACGTTCTCATACATTAGTTTTACCAACGCAAACCATTT TTTTTTTATTCCCCCTGACTAGGGGATGCTCAGACGGTCTAGATGTTCAT TTTTTTCTTTAAACTCAAACCATCGACTGTACGGCAACGTTGCCCAAACC GCCTCCCATCAAAGGAATCAACCCATCTGTCTTTCCCCATTTACGCCCTT GTTCGTCGCGTTTTATCGCGATGCAAGTTCAGCACTCTTGTGAAAACATT ATAATATTTATAGTATATCTATGGTTAAACATTGCTTACCCAGCTTCGGA AACGAGAAAGCCACCGTACGAGTAGGCTCTATAGCACTCCAATATAATAT CGTATCATAAGTACTGCTGTCAGAACAGTTCTATAATATTAATAGTATTA ATACAGAAGTACGTATTACTGCACCAGCAATAATTTCTCAACACGTTCAT GAGCTGAAAACACTCCGCTTCCCCTACACTTGGTACGACTTTTTTTCCAT CTTGATAAGAGGACCAGTACTTGTGCATTCCAACTATCCATTACAATAAT AATGAATGAACAGCGGACAAAACTTCGTACTCGTACTACGAAGTTACGAG TACGTGTACGTCCTCAATCTTCTCTCTTACGATCTCATTGTTTTGTGCTT CCTGTGTGGTTCCACCTCCTGTCTTTCACATCAAATCGAATTTTTCCGTT CGCTCGTGTGATGTTTTTGCTGAGCTGGCTTTCGAGTAAACTTCACGCTA GAGTGTTTTCCATGATTTTCGAAATTCAACCAAAGAGTTTGAACTCGAAG ATCCAGAATACTAAAGAATAGCTGTTACTTACCCGCTCTATAATGGCGCG CTCTCAGTTGTACTTATAATACAGGAAGAGTTTTATTTGTCCGTGGGCAA GAGACAGCAGTAAACCGAAATACGAGACAGACTTGACCCTGTTGGTCGAA ACAGACTACAGCATTGGTTATGCATTGTACCTGCCACCTGGCTATGAAAG CCTAAGATGACAGAAACGGTTTTCGAATAATTTCGTTTTTACGTCAAAAT CATGAACTTGTAATAAAGCTTGCACGTCCCCTATATGTATGTATGGTCAC ACATATAGCAGGAGCATGGATCAACCTGGTAAGGTTGCCAATCCTGCTCG TGGTCAGCTGAACAGGGAAAAGAATATTCCCCTGTCCGCGTTCGTGCCTG AGAATTTGGTCTCTCGAGACGGTTCCGGCAGTACCGTCCCGCGTCAGCTC ATCTCCATACTCAGGCTGAATCTGGTGCTTACTATAAAGCTCGAAATATC CGCATATAGAGAGCCGACAGTACCTATTTACACAAATTAGAGCAGGAGGG TGCAGTCGTACCTTTTACTAAGGGGCCTTCACTTGAAAAGGTAGAGCGTG CAGCTCGTGTCCTCTATGTCACACATTCGGATTCCTTGCGTTACCTCTTC GCACGCATACGTGTACTTGTAATGTAATGCGGGCCCGCTATTACTGTACG TGTGTGAAAGTCCGTACCTGGTACTGGTATAGTACAATTGTACTGTAGTC CCGATTTCTATAATACCCTGAAAGTTTGCCTGGTATCTTGTAAATTGTGT GACAGTACGTGCCAAAAACAAAAGCTGCCGGTACAAGGTTTTTTCAAGGC AGTATGAGAAAAGGCAATGCACGTGCGCGTGCTCTAGTCATGACAAGTTT GATGTCTCCTTTTCTTCCCCTCCAGTGGTTTGGTCGGAAAATCGTGATTC ACCGCCTATCTCGACCAGACTTGAGCGCGGTATTTCATGCACGTTTATGT ATGGTCACACATATAGCAAGAGTATTGATCAACCGGGTAAGGTTGCCAAT CCTGCTCGTGGTCAGCTGAACAGGGAAAATAATATTCCCCTGTCCGCGTT CGTGCCTGATAATTTGGTTTCGCGAGACGGGTTCGGCAGTCCCGTCCCGC GTCAGCCTGCTCATCTCCATACTCGGGCTGAATCTGGTGCTTACTTCCGG GATTCCTCCCGAGTTCCGCGGCGGCGTCCATGTATATATTTTAATCCGCC ATACGCCATCGGGTCAGTCCCGAGTTTATGTGGTCACGCAATTGCGTACC GATGGCGCTCACAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTT CCGAACGATTGCTGCCTTGGCAGGTCACCATGAATTAATATACGCTCTCT TTCCCACACCCACTATTGTTATGAAGTGGGCATGTTGAAGGTACCATAAC ATGTTGAAATGGTTTGTTAAGTTTGGCCTGGACTACGAAAAGTATCCGAG CCGTCCGATGCAGTTTCGAGGAAAGAACCAAATCGGATTTCCGCTTGCCA GTGTTAGCGTCCTCGGTTTCCTTATGTTCCCTACGTTCCTACGTGCCGTG AGCTTTACTTGACGTCTTCTAAATTAACTGTCCACCTTAGGTCGAGCTCT TGGCGCTGAAGGAAGTGCAACTTGGAGCCAACACCAACATTAGCCACGTT CAAAATGAACGTCTCATCATGCAAGCTGTCCCGCCTCACCCGTTTGTGGT GGGCATGCTATACGCCTTCCGAACTCCGAGGTCAGGTGTTCGCCCGCGCA GCTCGAAATCTCACATACACGTTTCAAATTGTTTATCACACATGGTGCTA TCCGAGACCCCGACCCTAAATGCTCTCCAAGGGTTACGGAGAAATGGTTT GTATTAGTACTTGCGGTGGGATGCTCTTTGATGAAAAGGAAGACAAGCGT GGCTTTCCTGCGATGATACAGAAGCGATTTCGAACCCCTCCGTCGATGCG ATTGTGATTTCCAATGGCGTCAGAGGGTGTCGCATTGCTGTCTATTTGAC TTGAACCGCAGGTTCCTGTACTACGCCCTAGACTTCATGAATGGCGGCGA TTTGTTCCGGCACTGGAGGAAAAACCGTAACAAGCGCACCGAGATGGCTC CATTCTACGCCTCAGAGGTAAACGACGGCGTCTTTGAGGTATTTTTATAC AATCGAGGGAACTGCTCTTCTTACCACATGACCCTCGTTCGCTTCACACC ACCCATTTTAACTGAGCTAGATCTTACGTTGATGGTTAATGAAAAATCAG AACACTCCTATCTATACCTTCTGAGCGTCCTCCAGTAAGAAGAAAAACAT GTCAAAACATTTAGGTGGGATCATAGGCTGCAAATACAAAAGATTTTGGT GGCATTTAAACGGGTTCCCCTATGGTAGTTACATTGGGTCAACAGTATAA TGTCAGGGAGAAGCCCACCGTTATACTGTACACACTTACACAAATCGCCA TGCAGGGACACAAGTAAAACAGCAAAAACAAAAACAATGTAGTACAACAT CAAACATGGTAGTAATAAAATACTTCCATAGGCTGTAAAAATACGTAAAC ACTACTGGTACATGGTATTTAAACGGGTTCCCCTATGATAAAAAACCATG GGTCAACAGTATAATATTGGGGAGGTTTTAACAGTATAATATTGGGGAGG TTTTAACAGTATAATATTGGGGAGGAGCCCAGTATTATACTGTACACATA TATTAATCGTCATGCCGAGCCTCCAAACACAACAGAGTGGGGCAACCGTA AATTGTTGGGGAGAGACCTATCGTCGTACTAAACGATACAAGTATATATA CAGACGTGATACTAGAAGTTTGTCCAATACCGGTAACTATTAATAATAAC ATCCGAACACGCCTAAACCTGCGTTTTTTTATATAGGAGAGAATGCGCCA AGTAGATCATTAGTTTACAGTACGATACAGTGCAGTACCCTAGTAATACC CTAGTAAGAGTACAATATATATTGTTGTTTCGTAGGCTAAAAGTAACCTC TTCATCATGGCATTAATCACCATAACGAGACACCAAAACACAACAATTAC CAAAGGCACGATAAGCTAGGGTACATCCACTTTGTTACATTAGGTCTAAG ATCGGATGGGTGTCAATAAGGGAAGTCTACACGTTATAGATATAGAGGTG ATACTGGAAAATTTCCCCAAAGTATTACTATTCGGTACATACTTACTGTA CCAGTAGTACTCTGTGTTACATACTTTATTAGTGTTCAGTACAATACAGT ATGTATATATGGTCATCACATATAGCAGAGTATGGATCAACCGGGTAAAA GGTTGCCAATCCTTCTCGTGTTCAGCTGAACAGGGAAAATGAATTTTCCC CTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCG TCCCGTCCTGCGTCAGCCTGCTCATCTCCATACCCAGGCTGAATCTGGTG CTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTTAT TTTAAATCGCCGTACGCCATCGGGTCAGTCTCGAGTTTGTCGGGTCACGC AGTTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACAGGGTCA GTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCACCATG GACCAATTAATATTCTCCTCTCTTTCCCACAGCTACTAATGGTATGAAGT GGGCATGTTGAAAGTACCGGCAGTACAGTACTGTAGTAATAGTAGTATAC GATAATAACCATCATCGAACAAGACAACGTTAGCCTAAACCTTCTGAGCA TCCTCCGGTCAGGAGGGAAAATGTCAAAACATTCAAGGGATCATGGGCTG CAAATACAAAACCACTTCATGACATTTAAACGGGTTCCCCTATGGTGATA ACATTCGGTCAGCAGTATAATGTCGAGGAGAAGCTCACAGTTATACTGTA CTCGTACATTTACATTAATCGCCATGCAGAGACACCAGAAAAACAAAAAC AAAAACAATGTTGCGTTTCCTGTCTGCCCGGGGATGGATCTCAGGTTCTC TTGGCCCTTGAACACCTACACAAGCACTGCGTCATATATCGGGACCTCAA GCCCGAAAACGTACTCTTGGACTCGCAGGGTGAGATTTCCGCGACGCAAC CCGCGAAGTATGCGACCCCGCCCGGAGGAGTTGTTATTGTCAGGAAATCT TTGAAGTGTCGTCTTATCGGGCGTTAGACGTTGATTGTTGTTCACTTGGT TTTTCGCATTGCAGGACTCCCACATACCTGGTACAGTCTTCCTTCTAGCG GCATTAACTGTAGCGCGTTTTTGTAAAGCCAATATTTCTTGAGTTCGGTA CTCGTAAAGCCTTGGGTTCAGCTGAGTCGCAACATGTTGGTCCAAGGTCC CCATCTTTCACCTCCGTGGGTGTTCTTGGGAACGTTTCCGTTTCCTTGTA GCTGACATATTTATTCGTGACTTGACGCAGGGCATATTCGACTCGCAGAT CTGGGCTTGGCAAAGGTCTTGAAGAGCAAGGTCGACAGGACCAACAGGTG CAATCCTCTGACTCTTTTCATACATTTTTTATGTTTAGCTCGAAGATGAC CCTCCTTTATTTTTAGCGATTCATCATGGACAGGGATACTCGTCGTACCT CGAGGCAATCTCCGGGCGAGCCGCAATTTGTGTCTTGGGGTAAAACCCCT TGTCTTCTGGGGATCGACAAAAAAAAAGGCTAAGGTCGTTGAGCTGCATC GATATTTCAGTTTTCTGGTGACGTGCACCCGATACTTGCGAGCGATTCAG CCTCAACGGGTTCTGTACCGAGGCACGAGTTTTTGACCCCGTTCTCCATT ATTGGGTTTCCCGTTCGCTCTAGATGGAAAATATCATAGTAGACGAAGGT CAGCCCAACCCCCGAGGTATCAAAAGGTCCAATGACTTGTACACTGAACG CGTAAAAGAATATCTCTAGAAAGCAATTCAAACGCTAAGCTGCTGATCGT CAAGCTAATCCTTGTCGGATATTATCAAAATGATTTGATGACAAATTTAT CCAGACAAGCGGACCGAGTCAAACTCCACCCGCTTCTCTCATAACCCCGT TGATCAGTTTCTGTGGAACTGAAGCATACCTCGCACCTGAGATGATTCTG CGTCTCCCTTACGGGGCGTCGGTGGATTTCTGGCAATACGGGTGTTTCGT TTACGAGCTATACGCCGGGCGATCACCGTTTTGGTTGCCTCGGAAGCCAC GAAAATTCATCCGAGAGAACATCCTGAACGGCGTGTTCGCTTATCCATCG GTTGTGCCGGAGCCAGCCAAGGGTATCACAGGTGCTTTACTGCAGGTGCG CGATGAAACGTATTTTACTTTTTTACATCGGTTTTCCAGGCACGGGATAA GGTGGCAGGAGCAGAGCTTCCTTTTTTCAGCAGTGTCATCCATGAGAGAA CCACCGCATGTGTGCATATGTGTGCTTTATAAGCACCGAGAGGCCATCAC AGTTCTAAAAGAACCCTTCTTAAATAAAAACAAAAGCAACAACCTGTACG GAAGTGTAGTCTTGTGCTATAAACGATGAGTAACTCGACACGATCTGCGG ATCAGGTGGTCGAGGGTCGACGCCTCGGGTGCGGGAAAGGGTTCGCAGCA TGGGATGACGTCAAGGCAAATGGCTTTTTTGCTAATACGGACTGGGAAGC TCTTGCTCATAAGAAAACGCGACCGCCAGTCCTTCCGGCAAATCCCGGAA AGGAAATGGTCAACAACTTCGACGACGATTTCACTAAGTAAGTACAAACC TGCGGGGCTTTACGAATGCATTTCTGAATCGACTAAAATTAGCTCCCAGC ACACTTTCTTTTGAAGCTATTCTAACTTAAAGTTATTTTCGGATTTCTTG AAAGCAGGCAACCCGTGTTCTGGGGTAACGACGTGGACGCAAACGGAGAT TGCCCAGTCTTCTACGAGGGCGAACTGGAGGGATTCAGCTTCATCAGGTA AGCCGCTGTTTGCCGATGCTTATTCGATTGGGATGCCTCATGGGCGCTTG TTTTTACTTCTGGTATGCGCGACAAAAGAATTTAACCTGGAAAAGGTTTA CAGATGAGGCAGAATCTTTGTGATGTTCGTGGACGATTGTGTTTCCTTCT GGTAACGTCAATAGTAGAGGCACCAGTAAATGGCACACGAACGGGGTCAC AATCCGAGTAATTTTTTTCGAAGGACAAGAGTTAGGAGATGAACATGGAA TAGTAATTATGCCTCAAACAATCCTCTTCCACTCCCCATCTTATGCAATA TTCTTTGTTTTCGATAGGGACAACTACGACGAGCACGTCACCGAGGATAA GCTTGAGATTTCATAATGTACAACTACACTAGCAGGTCACCGTAGTGATG GGACGCCAAAGAAGGAGGAAGGGAGTTAGACAAGGTGTTCGGTGTATATG GGCTCGAGTATTCGTATTGCCGATGTGGGTGCTGCTTTAGTCCCATCCTT GGATCAGGCAAAAAGAGCAGGTCGCTGGGGCGTCCACCAAGGCGGCAAGC ATCTGTTTTTTCCGTCTTTCACATAAACGAGTTCAGTTTTAGGTTTGAGT GTCAGCCAAGATAAAAGACAAAGGTATTGCTTTGTCCACTCGTGTTACAG CGAATTTACTCAAACGCTAACACCGGTATGAATTTCGCACGGCTGTGATG TTTTCTTTAGTGTTACATAATCGGTCATTGATGTTAAGCGTATTTGTAAC AGCAGTTCTTGCTTGGCTTCTTTCTGTAGTTGTTCGATTGTTGGGGGTTT GGGGAAAAGTTAGCCCTGCGTTGCATTGCATGGCGATCTAATATATAAGT TACATTTATAGATGCGTTTCAAAAGCGTGAGCAACAAAAATATACAGTAG TTGTGTCCACAAGGTGAAATCTTCAAGGTAAATCCTTGTAGATGATTTGG TTTTGGAAACTAATCGTATGACTTCTGCACACACCTTTGTAAGGTAGTTT TTTCAGGTTCATCACATTTTCTAGTATTCGCGGCTGTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig853:297031..307318+

>mRNA_F-serratus_M_contig853.19935.1 ID=mRNA_F-serratus_M_contig853.19935.1|Name=mRNA_F-serratus_M_contig853.19935.1|organism=Fucus serratus male|type=CDS|length=3240bp|location=Sequence derived from alignment at F-serratus_M_contig853:297031..307318+ (Fucus serratus male)
ATGTCTGCGAAGCAGCTCGGGGGGGAAGGCGCGATGCATGCGCAGAACCG
AGAGGAAAAGGTTGGACTCCTGCGGAAAGTGACCCCTGTTCATGCAGGGC
CGCTGAGAAGGCGCACCCGCTTTTTCAAGGCCCAACACTATTTCGAGATA
AGGTCCTCTGTTCTTCTGCTATACAAGTCCCGAAAGCGCTCCTCCAACCC
CGGCTTCCTCGAGTCCCTTTTCTCAAAATCAACAGAGGGGGACGTTATCG
ACTCGGAGATCGTTCAAGCTGCTTCCAGCCAAGGACAATGGGATGCTGCA
TTCGATATGTCTGGTGCAAAAATAACTGTGTTTTCCCCCGATGAGAAGGT
AGGCAGCTTTCCATTCCGCATATCGTTTGAGGGCATCTTCATTCTGAGCG
TGTCGGTCGTCGACTCCTGCGACAAGGATAGCCCTCAACGCAGCCTGTAC
CTCATGGCTCCGACCGCTGAATCTAGATGTCTGCGAAGCAGCTCGGGGGG
GAAGGCGCGATGCATGCGCAGAACCGAGAGGAAAAGGTTGGACTCCTGCG
GAAAGTGACCCCTGTTCATGCAGGGCCGCTGAGAAGGCGCACCCGCTTTT
TCAAGGCCCAACACTATTTCGAGATAAGGTCCTCTGTTCTTCTGCTATAC
AAGTCCCGAAAGCGCTCCTCCAACCCCGGCTTCCTCGAGTCCCTTTTCTC
AAAATCAACAGAGGGGGACGTTATCGACTCGGAGATCGTTCAAGCTGCTT
CCAGCCAAGGACAATGGGATGCTGCATTCGATATGTCTGGTGCAAAAATA
ACTGTGTTTTCCCCCGATGAGAAGGTAGGCAGCTTTCCATTCCGCATATC
GTTTGAGGGCATCTTCATTCTGAGCGTGTCGGTCGTCGACTCCTGCGACA
AGGATAGCCCTCAACGCAGCCTGTACCTCATGGCTCCGACCGCTGAATCT
AGGTCACAGTGGGTCCACCATTGCAATCGAGCAGCGCGGACGTTGTCCAG
AGCAGACTTCGAGCCGTTGAAGACAGTGGGAAAAGGACAATGGGGGAAGG
TTTTTCTCGTGCGCAAGGCGTCGGGGCCGGTGGCGGGGAGGGCTGCACAA
GATCCTGGTCTGGTGAACACGGTGGACGGTTCGAACAAAGTCACAGTGGG
TCCACCATTGCAATCGAGCAGCGCGGACGTTGTCCAGAGCAGACTTCGAG
CCGTTGAAGACAGTGGGAAAAGGACAATGGGGGAAGGTTTTTCTCGTGCG
CAAGGCGTCGGGGCCGGTGGCGGGGAGGGCTGCACAAGATCCTGGTCTGG
TGAACACGGTGGACGGTTCGAACAAAGTCGAGCTCTTGGCGCTGAAGGAA
GTGCAACTTGGAGCCAACACCAACATTAGCCACGTTCAAAATGAACGTCT
CATCATGCAAGCTGTCCCGCCTCACCCGTTTGTGGTGGGCATGCTATACG
CCTTCCGAACTCCGAGGTCGAGCTCTTGGCGCTGAAGGAAGTGCAACTTG
GAGCCAACACCAACATTAGCCACGTTCAAAATGAACGTCTCATCATGCAA
GCTGTCCCGCCTCACCCGTTTGTGGTGGGCATGCTATACGCCTTCCGAAC
TCCGAGGTTCCTGTACTACGCCCTAGACTTCATGAATGGCGGCGATTTGT
TCCGGCACTGGAGGAAAAACCGTAACAAGCGCACCGAGATGGCTCCATTC
TACGCCTCAGAGGTTCCTGTACTACGCCCTAGACTTCATGAATGGCGGCG
ATTTGTTCCGGCACTGGAGGAAAAACCGTAACAAGCGCACCGAGATGGCT
CCATTCTACGCCTCAGAGGTTCTCTTGGCCCTTGAACACCTACACAAGCA
CTGCGTCATATATCGGGACCTCAAGCCCGAAAACGTACTCTTGGACTCGC
AGGGTTCTCTTGGCCCTTGAACACCTACACAAGCACTGCGTCATATATCG
GGACCTCAAGCCCGAAAACGTACTCTTGGACTCGCAGGGGCATATTCGAC
TCGCAGATCTGGGCTTGGCAAAGGTCTTGAAGAGCAAGGTCGACAGGACC
AACAGGGCATATTCGACTCGCAGATCTGGGCTTGGCAAAGGTCTTGAAGA
GCAAGGTCGACAGGACCAACAGTTTCTGTGGAACTGAAGCATACCTCGCA
CCTGAGATGATTCTGCGTCTCCCTTACGGGGCGTCGGTGGATTTCTGGCA
ATACGGGTGTTTCGTTTACGAGCTATACGCCGGGCGATCACCGTTTTGGT
TGCCTCGGAAGCCACGAAAATTCATCCGAGAGAACATCCTGAACGGCGTG
TTCGCTTATCCATCGGTTGTGCCGGAGCCAGCCAAGGGTATCACAGGTGC
TTTACTGCAGTTTCTGTGGAACTGAAGCATACCTCGCACCTGAGATGATT
CTGCGTCTCCCTTACGGGGCGTCGGTGGATTTCTGGCAATACGGGTGTTT
CGTTTACGAGCTATACGCCGGGCGATCACCGTTTTGGTTGCCTCGGAAGC
CACGAAAATTCATCCGAGAGAACATCCTGAACGGCGTGTTCGCTTATCCA
TCGGTTGTGCCGGAGCCAGCCAAGGGTATCACAGGTGCTTTACTGCAGGT
GGTCGAGGGTCGACGCCTCGGGTGCGGGAAAGGGTTCGCAGCATGGGATG
ACGTCAAGGCAAATGGCTTTTTTGCTAATACGGACTGGGAAGCTCTTGCT
CATAAGAAAACGCGACCGCCAGTCCTTCCGGCAAATCCCGGAAAGGAAAT
GGTCAACAACTTCGACGACGATTTCACTAAGTGGTCGAGGGTCGACGCCT
CGGGTGCGGGAAAGGGTTCGCAGCATGGGATGACGTCAAGGCAAATGGCT
TTTTTGCTAATACGGACTGGGAAGCTCTTGCTCATAAGAAAACGCGACCG
CCAGTCCTTCCGGCAAATCCCGGAAAGGAAATGGTCAACAACTTCGACGA
CGATTTCACTAAGCAACCCGTGTTCTGGGGTAACGACGTGGACGCAAACG
GAGATTGCCCAGTCTTCTACGAGGGCGAACTGGAGGGATTCAGCTTCATC
AGGCAACCCGTGTTCTGGGGTAACGACGTGGACGCAAACGGAGATTGCCC
AGTCTTCTACGAGGGCGAACTGGAGGGATTCAGCTTCATCAGGGACAACT
ACGACGAGCACGTCACCGAGGATAAGCTTGAGATTTCATAAGGACAACTA
CGACGAGCACGTCACCGAGGATAAGCTTGAGATTTCATAA
back to top