mRNA_F-serratus_M_contig8461.19842.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A0N4THB6_BRUPA (Uncharacterized protein n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4THB6_BRUPA) HSP 1 Score: 55.1 bits (131), Expect = 8.730e-9 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 73 RPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
RPYHV+ TTSRP+C+V++R AGLVL T WE+ VL
Sbjct: 15 RPYHVESTTSRPICQVRQRSAGLVLGSETAWESQVL 50
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A3S0ZIY3_ELYCH (Uncharacterized protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZIY3_ELYCH) HSP 1 Score: 55.8 bits (133), Expect = 1.400e-8 Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 40 YKLFFAGLVQERPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
YK L RPYHV+ T SRP+ EVK+RRA LVLRW T WE VL
Sbjct: 54 YKPSLICLCCLRPYHVENTGSRPITEVKQRRAWLVLRWVTAWEHHVL 100
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A183UVC8_TOXCA (Uncharacterized protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UVC8_TOXCA) HSP 1 Score: 55.1 bits (131), Expect = 2.800e-8 Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 43 KLFFAGLVQERPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
K FA RPYHV+ TTSRP+C VK+RRA LVL T WE+ VL
Sbjct: 55 KCAFAVTTCLRPYHVENTTSRPICHVKQRRAWLVLGSETAWESQVL 100
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: V4BHB9_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BHB9_LOTGI) HSP 1 Score: 54.7 bits (130), Expect = 3.230e-8 Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 43 KLFFAGLVQERPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
KL F L RPYHV+ T+SRP+ EVK+RRA LVL W T WE VL
Sbjct: 49 KLIFLCL---RPYHVENTSSRPITEVKQRRARLVLGWVTAWEHRVL 91
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A3S0Z3S7_ELYCH (Uncharacterized protein (Fragment) n=2 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z3S7_ELYCH) HSP 1 Score: 53.5 bits (127), Expect = 5.900e-8 Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 73 RPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWE 168
RPYHV+ T SRP+ EVK+RRA LVLRW T WE
Sbjct: 1 RPYHVENTGSRPITEVKQRRAWLVLRWVTAWE 32
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A0N4TUH7_BRUPA (Uncharacterized protein n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4TUH7_BRUPA) HSP 1 Score: 52.8 bits (125), Expect = 6.190e-8 Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 64 VQERPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
V RPYHV+ TTSRP+C+VK+R A LVL T WE+ VL
Sbjct: 5 VNLRPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 43
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A816YMV4_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816YMV4_9BILA) HSP 1 Score: 52.8 bits (125), Expect = 7.160e-8 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 1
Query: 73 RPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPV 177
RPYHV+ T+SRP+ EVK+RRA LVL W T WE V
Sbjct: 1 RPYHVEYTSSRPITEVKQRRARLVLGWVTAWEYRV 35
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A0N4TUI9_BRUPA (Uncharacterized protein n=3 Tax=Brugia TaxID=6278 RepID=A0A0N4TUI9_BRUPA) HSP 1 Score: 52.4 bits (124), Expect = 7.850e-8 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 73 RPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
RPYHV+ TTSRP+C+VK+R A LVL T WE+ VL
Sbjct: 2 RPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 37
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A8NMS7_BRUMA (Uncharacterized protein n=3 Tax=Brugia TaxID=6278 RepID=A8NMS7_BRUMA) HSP 1 Score: 52.4 bits (124), Expect = 9.340e-8 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 73 RPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPVL 180
RPYHV+ TTSRP+C+VK+R A LVL T WE+ VL
Sbjct: 11 RPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 46
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Match: A0A815TME6_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815TME6_ADIRI) HSP 1 Score: 54.3 bits (129), Expect = 5.080e-7 Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 67 QERPYHVDCTTSRPLCEVKRRRAGLVLRWGTTWEAPV 177
Q RPYHV+ T+SRP+ EVK+RRA LVL W T WE V
Sbjct: 243 QPRPYHVEYTSSRPITEVKQRRARLVLGWVTAWEYRV 279 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8461.19842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8461.19842.1 >prot_F-serratus_M_contig8461.19842.1 ID=prot_F-serratus_M_contig8461.19842.1|Name=mRNA_F-serratus_M_contig8461.19842.1|organism=Fucus serratus male|type=polypeptide|length=64bp RKPPWKKVNVLCFYKLFFAGLVQERPYHVDCTTSRPLCEVKRRRAGLVLRback to top mRNA from alignment at F-serratus_M_contig8461:6793..6984- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8461.19842.1 ID=mRNA_F-serratus_M_contig8461.19842.1|Name=mRNA_F-serratus_M_contig8461.19842.1|organism=Fucus serratus male|type=mRNA|length=192bp|location=Sequence derived from alignment at F-serratus_M_contig8461:6793..6984- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8461:6793..6984- >mRNA_F-serratus_M_contig8461.19842.1 ID=mRNA_F-serratus_M_contig8461.19842.1|Name=mRNA_F-serratus_M_contig8461.19842.1|organism=Fucus serratus male|type=CDS|length=384bp|location=Sequence derived from alignment at F-serratus_M_contig8461:6793..6984- (Fucus serratus male)back to top |