mRNA_F-serratus_M_contig840.19790.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI) HSP 1 Score: 376 bits (965), Expect = 3.050e-107 Identity = 323/859 (37.60%), Postives = 380/859 (44.24%), Query Frame = 2
Query: 47 GRGREEVDVLQVSCAQQCFAAVTRGGSLHTWGLDDGSGRLGHGPRPNGKVHDADQDGTGGAEANAGAGTRENVQAVGVGGLNVVAAGASADGRVQLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGGPRGVRGRCVDATGSEKGNGGGEARVVVFQPTLVLLWQRPAGSSTAAAGGRGMPEGRDDLPLRVLQVACGRFHSLAIARSRREN----------------FLQQGVSAPPSTSPTGAGTGTNLLLSWGRAGCGRLGRNPSL-PSQSSNGQSPSHPLSLSRRKALVLPPYTAHLTQVAGGFGVGSIRGDAAVDW--------------------------------SNPSNTPGNRDLNRAGTLLSSAPEP----------PTPRYAPETDGSFDLPAVVECDWSYRVNDHREQGVPLALAPTYNRTDQSN-----------------------------------GGTFSGET---GGDSDLCGPVAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSVAASSTGTFHDSPALSPTNLPQRSEGAVGVGDNRGGXXXXXXXXXXESEGGFERTNVSQSDC-LAPTAV-----GIQGGTLARLYVESIAAGDDHCTAVTAPKRASLDKTDSSVGGXXXXAGVTE-----------ESALTRVFTWGLNAAGQCVQSRATEIVPAPQEAELLSGARTVGCGGGHTMVVL 2281
G G VDV+QVSC + FAAV RGG L+TWGLD GRLGHG G GGA AGTR + +A LKAP RV +L + V+QVSCGA+HTL +T++G LFAWGDNRYGQCGLP W SLSS + S G + GL G + ++S K PGG + G D + KGNG + VF+PTLVLL Q EG DDLPLRVLQVA GR HSLAIA SR + N+L SWG G GRLGR P PS S SPS R+ PP+ + +AG G R R+G APEP PTP + +F++PA V DW+YRVNDHR G PL PT G G T GD GPVA+AAGWRHSVAVT +GA F WGCG++GRLGLGS D P+Q+RALASR+IR+RQAAAGRAHT+FLSE+G VYSCGSNE GQQGR G+ S A QRS + D + VS S C LAPT V G ++ L V+ +AAGDDHCT +T+ + ++ T XXXX S+ RVFTWGLNAAGQC RA E+V APQEAELLSGAR VGCG GHTMVVL
Sbjct: 789 GAGWSAVDVVQVSCGKHFFAAVARGGGLYTWGLDASDGRLGHGS------------GGGGA-----AGTRAD----------------AAGSPFWLKAPVRVAALSADHVVQVSCGAKHTLVITSEGHLFAWGDNRYGQCGLP-WH----------SLSSPADSPRGDGDGQFGLKT-FGQMAKKMSTKK------------FPGGADKAG------------DGSDGGKGNGDSGGGMTVFRPTLVLLRQ----------------EG-DDLPLRVLQVASGRQHSLAIACSRSNDKACVPDNSAXXXXXXXXXXXXXXXXXXXXSARVNHRANVLYSWGATGSGRLGRLPRRNPSSSPFASSPSLTSPSPRQPP---PPHRSKSDSLAGVLPSAKSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLGERREREGGRGGPRSGDGELPAPEPGQQGSAPRATPTPXXXRPPE-AFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGVTEGMTVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSEGRLGLGSHVDANAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRG-GAGSAA-------------------QRSSASQSNADGSSRETSRSTHPAVDGGXXXXXXXVSTSLCMLAPTIVTXXXXXXXXGGVSGLRVQRVAAGDDHCTVLTSSEPNTVTATXXXXXXXXXXXXXXXXXXXXXXXXQGSSSGRRVFTWGLNAAGQCAHGRAAEVVGAPQEAELLSGARAVGCGAGHTMVVL 1537
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A6H5JWJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ8_9PHAE) HSP 1 Score: 359 bits (922), Expect = 6.200e-103 Identity = 324/878 (36.90%), Postives = 384/878 (43.74%), Query Frame = 2
Query: 2 GGVEGGGDERVEAGRGRGREEVDVLQVSCAQQCFAAVTRGGSLHTWGLDDGSGRLGHGPRPNGKVHDADQDGTGGAEANA------GAGTRENVQAVGVGGLNVVAAGASADGRVQLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGGPRGVRGRCVDATGSEKGNGGGEARVVVFQPTLVLLWQRPAGSSTAAAGGRGMPEGRDDLPLRVLQVACGRFHSLAIARSRRENFLQQGVSAPPSTSPTG-----------------AGTGTNLLLSWGRAGCGRLGRNPSL-PSQSSNGQSPSHPLSLSRRKALVLPPYTAHLTQVAGGF--------------------------------------------GVGSIRGDAAVDWSNPSNTPGNRDLNRAGTLLSSAPEPPTPRYAPETDGSFDLPAVVECDWSYRVNDHREQGVPLALAPTYNRTDQSNGGTF-------------------------------SGETGGDSDL-------CGPVAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSVAASSTGTFHDSPALSPTNLPQRSEGAVGVGDNRGGXXXXXXXXXXESEGGFERTNVSQSDCLAPTAVGIQGGTLARLYVESIAAGDDHCTAVTA--PKRASLDKTDSSVGGXXXXAGV----------TEESALTRVFTWGLNAAGQCVQSRATEIVPAPQEAELLSGARTVGCGGGHTMVVL 2281
GG EG G+ER G DV+QVSC + FAAV RGG L+TWGLD GRLGHG R DAD++G G +A G LKAP RV +L + V+QVSCGA+HTL +T++G LFAWGDNRYGQCGLP W PSLSS S G + GL G + ++S K F GG + D + KG+G + VF+PT VLLWQ EG DDLPLRVLQVA GR HSLAIA SR + S+ N+L SWG AG GRLGR P PS S S S S R+ PP+ + +AG G G + D P PG + G+ + P PP R PE +F++PA V DW+YRVNDHR G PL PT +G+T G S L GPVA+AAGWRHSVAVT +GA F WGCG+ GRLGLGS D P+Q+RALASR+IR+RQAAAGRAHT+FLSE+G VYSCGSNE GQQGR + SS XXXXXXX + G+ G L V+ +AAGDDHCT +T+ P A XXXX ++ S+ RVFTWGLNAAGQC R E+V APQEAELLSGAR VGCG GHTMVVL
Sbjct: 423 GGTEGRGEERA------GWSAADVVQVSCGKHFFAAVARGGGLYTWGLDASDGRLGHGRRG-----DADREGDGDXXXAVEXXXXXXXXXXXXXXXXXXXXXXXXTGAEAAGGSFWLKAPVRVAALSADTVVQVSCGAKHTLVITSEGHLFAWGDNRYGQCGLP-W----------PSLSSPGDSPRGDGDGQFGLKT-FGQMAKKMSTKK--------FFGGAD----------------KAGDGSDGGKGSGDSGGGMTVFRPTRVLLWQ----------------EG-DDLPLRVLQVASGRQHSLAIACSRSTDKACVPDSSXXXXXXXXXXXXXXXXXXXXXXVVHVNRRENVLYSWGAAGSGRLGRLPPRNPSSSPFASSSPSLTSPSMRQPP--PPHRSKSDSLAGLLPSAKGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGEGXXXXPRSGDGELPPPEPGQQ-----GSAPRATPAPPXXR-PPE---AFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGDTEGMSVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSDGRLGLGSHVDAGAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRGGAGSAARRSSXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXAPTIXXXXXXXXXXXGVSG-----LRVQRVAAGDDHCTVLTSSEPNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQGSSSRRVFTWGLNAAGQCAHGRVVEVVGAPQEAELLSGARAVGCGAGHTMVVL 1211
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A7S3Y2W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2W4_HETAK) HSP 1 Score: 108 bits (271), Expect = 7.000e-23 Identity = 89/275 (32.36%), Postives = 117/275 (42.55%), Query Frame = 2
Query: 1463 GGDSDLCGPVAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSVAASSTGTFHDSPALSPTNLPQR-SEGAVGVGDNRGGXXXXXXXXXXESEGGFERTNVSQSDCLAPTAVGIQGGTLARLYVESIAAGDDHCTAVTAPKRASLDKTDSSVGGXXXXAGVTEESALTRVFTWGLNAAGQCVQSRATEIVPAPQEAELLSG-ARTVGCGGGHTMVVL 2281
GGD G VAAGW HSVAVTA+GA F WGCG GRLGLG+ D P+Q+RALA ++R+ +AAAG HT+FL G V++ G + GQ G +P+ + GA + N G GG V+ +AAG++H T+ GG V+TWGLN + Q R T+ VP P E +LSG AR + G HT+VV+
Sbjct: 18 GGDGGGKGVAFVAAGWAHSVAVTAEGAVFAWGCGEHGRLGLGAHRDAAFPEQLRALAHPALRVAKAAAGYGHTLFLGRDGRVFATGLAKFGQVG--------------------------IPEEMANGAFDLVKN--GRKGFPALLAPLHVGGALAPGXXXXXXXXXXXXXXXXXXXXXXXVD-VAAGENHSVVRTS-------------GGA--------------VYTWGLNLGDRAAQGRGTQAVPVPTEVPILSGKARAITAGAAHTLVVV 236
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: UPI001244A0CA (RCC1 repeat-containing protein n=1 Tax=Hymenobacter baengnokdamensis TaxID=2615203 RepID=UPI001244A0CA) HSP 1 Score: 75.1 bits (183), Expect = 6.040e-10 Identity = 165/657 (25.11%), Postives = 231/657 (35.16%), Query Frame = 2
Query: 74 LQVSCAQQCFAAVTRGGSLHTWGLDDGSGRLGHGPRPNGKVHDADQDGTGGAEANAGAGTRENVQAVGVGGLNVVAA-------GASADGRV------QLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGG-PRGVRGRCVDATGSEKGNGGGEARVVVFQPTLVLLW-------------QRPAGSSTAAAGGRGMPEGRDDLPLRVLQVACGRFHSLAIARSRR------ENFLQQGVSAPPSTSPTGA------GTGTNLL------------------LSWGRAGCGRLGRNPSLPSQSSNGQSPSHPLSLSRRKALVLPPYTAHLTQVAGG--FGVGSIRGDAAVDWSNPSNTPGNRDLNRAGTLLSSAPEPPTPRYAPETDGSFDLPAVVECDWSYRVNDHREQGVPLALAPTYNRTDQSNGGTFSGETGGDSDLCGPVAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQI-RALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSVAASSTGTFHDSPALSPTNLPQRSEGAVGVGDN 1864
+QV+ A+ G+L+ WG D+ SG+LG+ + A G A AGTR A G G +AA G ++ G++ AP R +QV+ GA H+LA+ ADG L+AWGDN GQ G +P P S ++ G L G ++ + + NG G G + P V G V G + G V V ++ W A S+ A G MP G R++QVA G F ++A++ S NF Q G + S+S GA TGT L+ +WG G+LG + S S P+++S P L QVA G + + A W LN +G L + + S P V QG PT R V +AAG H+VA+ ADG T+ WG G+LG G+ TTP + + R+ Q A + L+ G +Y+ G N GQ G N + S PA + L Q AVG G N
Sbjct: 209 VQVAAGATHSLALATDGTLYAWG-DNTSGQLGNTSNTSSSTPVAVSQGA------APAGTRFVQVAAGQGFSLALAADGTVYAWGLNSAGQLGTTTPASSNAPLAAAMPAGTRFVQVAAGAMHSLALAADGSLYAWGDNASGQLGT----NNAPTGSPVPVAVSQGAAPAGL---LFGQVAAGSQAAHSLALAADGMPYAWGTNGSGQLGSGSTTLATTPVAVAG-LVQPRGYVQAAVGSRHTVAVQASGVLGAWGSNTHGELGNGTTNSTANSTPVAVGQGAMPAGT-----RLVQVAAGDFTTIALSASGTAYTWGYNNFGQLGNGSTTSSSTPGAVSQGAMPTGTRLVQVAAGPSHMLALAADGTAYAWGSNSSGQLGNGTTTTS--------STPVAVSL-------PAGVRLVQVAVGSSYSLALAADGTAYAWG----------LNSSGYLGNGSTT------------SSSTPVAVS------------QGA----MPTGTRL---------------------VQIAAGNYHAVALAADGTTYAWGQNIYGQLGNGTTTTSTTPVAVSQGALPAGTRLVQVMANNYISQALAADGRLYTWGYNTYGQLGINSTTNSTT----------PAAEYSGLTQWRGLAVGPGAN 761
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A7S3X5W4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X5W4_EMIHU) HSP 1 Score: 70.5 bits (171), Expect = 7.980e-10 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 2
Query: 1490 VAVAAGWRHSVAVTADGATFVWGCGAQGRLGLG-SCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQG 1744
V+VAAG HS+A+TADGA +VWG G +G+LG G P+Q+ ALA R R AAAG +H++F++ G+V+SCG + GQ G
Sbjct: 57 VSVAAGEDHSIAITADGAFWVWGNGQEGQLGHGVEPGFFFRPRQVAALAGR--RAVAAAAGSSHSLFVTADGLVWSCGCGDEGQLG 140
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A8K1C3K3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3K3_PYTOL) HSP 1 Score: 72.0 bits (175), Expect = 5.390e-9 Identity = 77/266 (28.95%), Postives = 116/266 (43.61%), Query Frame = 2
Query: 1490 VAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSVAASSTGTFHDSPALSPTNLPQRSEGAVGVGDNRGGXXXXXXXXXXESEGGFERTNVSQSDCLAPTAVGIQGGTLARLYVESIAAGDDHCTAVTAPKRASLDKTDSSVGGXXXXAGVTEESALTRVFTWGLNAAGQCVQSRATEIVPAPQEAELLSGA--RTVGCGGGHTMVVL 2281
V+VAA H +A++ADG + WG G +G+LG G P+ + ALA + R+ AAGR+H++ ++E G VY+ GSNE G GR GS ++++ + T + S V + ++ G ++ PT V G V+ I G H AV P+R T SS+ + S L V+ WG N GQ ++ T+ V PQ+ LS + GG HT+ L
Sbjct: 91 VSVAAKGSHVLALSADGRLYTWGRGDEGQLGHGDRVSHALPRVVSALAHQ--RVWLIAAGRSHSVAVTEDGAVYTWGSNEDGALGRPTGSDETSSATPTQVDTLYGVKVTQVECGSRHTVVLTSDKRVFSWGWGIYGQLGLGDATSRDI-------PTEVVAFRGK----KVQKICCGFRHSFAVL-PRRLMRSATSSSIAEMLSQS-PDPSSPLVDVWGWGWNEHGQLGETTPTKSVLKPQKILALSNVDLHLLAAGGRHTICQL 341
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: UPI001F5F7D30 (uncharacterized protein LOC124775860 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F7D30) HSP 1 Score: 72.0 bits (175), Expect = 6.490e-9 Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 2
Query: 1496 VAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQS---VAASS---------TGTFHDSPALSPTN 1822
++AG HS+A+TADG + WG G G+LG+GS D P+ ++ L + ++ Q + G H++FL+ETG V++CGS+ GQ G +S V SS TG FH+ ALS +N
Sbjct: 999 ISAGQYHSLALTADGRVYSWGWGVHGQLGIGSIEDALHPKPVKRLNGQVVK--QISGGHGHSLFLTETGEVFTCGSSVFGQLGNGGNIKSSTPVLVSSLPETCVLVSTGYFHNL-ALSTSN 1116
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A3S1BJQ1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BJQ1_ELYCH) HSP 1 Score: 70.9 bits (172), Expect = 6.700e-9 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 2
Query: 1514 HSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQGRNFGSQSV 1768
H VA++++G +VWG +G+LG+GS + TPQ + + I AA GR HT+FL+E+G VY+CG N++GQ G S+ V
Sbjct: 118 HCVAISSEGKVYVWGRNEKGQLGVGSTERIDTPQVLETF--EGLNIVAAACGRRHTLFLTESGKVYACGDNKMGQLGLGNQSEQV 200
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: A0A7S4PM21_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PM21_GUITH) HSP 1 Score: 71.6 bits (174), Expect = 8.240e-9 Identity = 130/508 (25.59%), Postives = 199/508 (39.17%), Query Frame = 2
Query: 317 DGRVQLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGG---PRGVRGRCVDATGSEKGNGGGEARVVVFQPTLVLLWQRPAGSSTAAAGGRG---MPEGRDDLPLRVLQVACGRFHSLAIARSRRENFLQQGVSAPPSTSPTGAGTGTNLL---LSWGRAGCGRLGRNPSLPSQSSNGQSPSHPLSLSRRKALVLPPYTAHLTQVAGGFG-VGSIRGDAAV-DWSNPSNTPGNRDLNRAGTLLSSAPEP-PTPRYAPETDGSFDLPAVVECDWSYRVNDHREQGVPLALAPTYNRTDQSNGGTFSGETG-----------GDSDLCGPV------AVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAA---GRAHTMFLSETGIVYSCGSNEVGQQG 1744
D + + P + S+ Q++CGA HT+A+TA G ++ WG+N++GQ GL R + P+L+++ SS +R +SCG SA +D F+F G+ G G P+ V + + G + V + + W ST+ G + MP L + ++CG A+ R L+ A TG G + SWGR G+LG +QS+ L + P + +T VA G G I D + W SN G LN P P PTP ET D+P + VN G +A T + S G G+ G G L P+ ++ AG HS + DG + WG G +G+LG DV T ++ + R ++A GR HT+ +++ G++Y+ G N+ GQ G
Sbjct: 203 DSQFDIPHPQILQSIHGQDFRQIACGASHTIALTAQGHMYVWGNNKHGQLGLGDVKNRKE-----PTLNTNMSS-----RGIRKISCGENH-----SAFLSDRDV-FTFGDGSEGALGHGNAKSQLVPKHVI-KLTEECRLRDLECGPKYTVALSDLGQMYFWGNMR--STSGKGQKNVFNMPRRFKGLEA-IYGISCGDHEITALVRIPIPPPLEHKFKAGIFIEDTGFGVVEGYIGRACSWGRGSDGKLGHGAGGLTQSN----------LDTPFPIYGPLHNYSITVVACGQDHSGCITDDGKIFTWG--SNKEGQLGLN------DYKPRPQPTPI---ETCIDPDVPRLKTAKNKIFVN--LIMGDWHCIAITNKKKVYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLG----HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLG 663
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Match: UPI0018AFC63A (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter ruricola TaxID=2791023 RepID=UPI0018AFC63A) HSP 1 Score: 71.2 bits (173), Expect = 8.640e-9 Identity = 131/506 (25.89%), Postives = 191/506 (37.75%), Query Frame = 2
Query: 380 QVSCGARHTLAVTADGQLFAWGDNRYGQCG-LPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGGPRGVRGRCVDATGSEKGNGGGEARVVVFQPTLVLLWQRPAGSSTAAAGGRGMPEGRDDLPLRVL----QVACGRFHSLAIARSRRENFLQQGVSAPPSTSPTGAGTGTNLLLSWGRAGCGRLGRNPSLPSQSSNGQSPSHPLSLSRRKALVLPPYTAHLTQVAGGFGVGSIRGDAAVDWSNPSNTPGNRDLNRAGTLLSSAPEPPTPRYAPETDG---SFDLPAVVECD---WSYRVNDHREQGVPLALAPTYNRTDQSNGGTFSGETGGDSDLCGPVAVAAGWRHSVAVTADGATFVWGCGAQGRLGLGSCADVTTPQQIRALASRSIRIRQAAAGRAHTMFLSETGIVYSCGSNEVGQQG-----RNFGSQSVAASSTGTFHDSPALSPTNLPQRSEGAV 1849
QV+ G H+LA+ ADG L+AWGDN YGQ G G TP+ + + ++ G L GL W + + N GT P V G N G A ++ W A G G P + P +V QVA G FHS G+ A S L +WG G G+LG NP+ +NG + +P A V Y + VAG +++G+ ++ W+ N G L ++ P P A T D V D W++ N + G+P+A+A T T G +D V VAAG HS+ + ADG+ + WG G+LG + T P + + Q AAG H++ L G +Y+ G N+ G+ G FG V GT+ A + +L R++G++
Sbjct: 147 QVAAGQFHSLALRADGSLWAWGDNTYGQLGNATNAGTTTPNPTPTQVAGTYTQATAGEAHSL-GLRADGSLYAW---GSNYYGQLSRAANAGTTTANPTPAA-----VPGTYTQVAAGNNHNLGLRADGSLW----AWGWNGYGQLGIPANSGNGAP---NPTPAQVAGTYTQVAAGAFHS-------------SGLRADGS------------LYAWGWNGDGQLG-NPA-----NNGNNTPNPT-----PAQVAGTY---VQVVAGRNHTLALQGNGSL-WAWGWNFSGQLGNGSTSGLNAANPTPAATGTALVTRSLSLGLDFGLAVRGDGTLWAWGSNAFGQLGLPIAMAST----------TRPVRVGTATDW---VMVAAGQFHSLGLRADGSLWAWGHNNFGQLGNATNNGTTNPNPTPTQVAGTYT--QVAAGAYHSLGLRADGSLYAWGWNQFGELGIATNSGTFGPNPVPTQVAGTYTQVAAGASHSLGLRADGSL 581 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig840.19790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig840.19790.1 >prot_F-serratus_M_contig840.19790.1 ID=prot_F-serratus_M_contig840.19790.1|Name=mRNA_F-serratus_M_contig840.19790.1|organism=Fucus serratus male|type=polypeptide|length=644bp MSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASback to top mRNA from alignment at F-serratus_M_contig840:7527..14944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig840.19790.1 ID=mRNA_F-serratus_M_contig840.19790.1|Name=mRNA_F-serratus_M_contig840.19790.1|organism=Fucus serratus male|type=mRNA|length=7418bp|location=Sequence derived from alignment at F-serratus_M_contig840:7527..14944+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig840:7527..14944+ >mRNA_F-serratus_M_contig840.19790.1 ID=mRNA_F-serratus_M_contig840.19790.1|Name=mRNA_F-serratus_M_contig840.19790.1|organism=Fucus serratus male|type=CDS|length=3864bp|location=Sequence derived from alignment at F-serratus_M_contig840:7527..14944+ (Fucus serratus male)back to top |