mRNA_F-serratus_M_contig84.19775.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: D8LCT7_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT7_ECTSI) HSP 1 Score: 215 bits (548), Expect = 2.820e-66 Identity = 103/132 (78.03%), Postives = 115/132 (87.12%), Query Frame = 2
Query: 284 SLPPGGTVSLGVSRRPPPDGESDALLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTHAPPRKCQALVVGQDMI 679
+LPPGGTVSLGVSRRPPPD S LL RSK+G+GEKTWGFCTSDGGAA +KEGDVIG+ALDFTDLPMLFF+RGG PLG GDELAVMRIRGTVYPA GV GGA +++AFA L H PPRKC+AL+VGQDM+
Sbjct: 2 TLPPGGTVSLGVSRRPPPDDASGELLSRSKLGDGEKTWGFCTSDGGAAGTLKEGDVIGIALDFTDLPMLFFTRGGDPLGEGDELAVMRIRGTVYPAFGVGGGAALSVAFAGDSLAHTPPRKCEALIVGQDMM 133
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: A0A7S2CN07_9STRA (SPRY domain-containing protein 7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN07_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.680e-22 Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 2
Query: 149 PPFTMHGTLRGKNVVVDR---MRVSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSRRPPPDGESDALLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTHAPPRKCQALVVGQDMI 679
P + RG NV VD + ++GDG+AL AP+EQD+AYWE+ +T G + +GV+R+ GE D S E ++W C A +++GDV+GVA DLP L F++ G + D V +I GTVYP V + GGA + F ++ + PP + L+V + ++
Sbjct: 39 PHIGIPDDFRGPNVKVDTGESLCITGDGVALASAPIEQDAAYWEIHVTKT---GLIKVGVARKMN-RGELDKTFDASAKDENGRSW--CLDGTDTRANLEDGDVVGVAFTQADLPNLSFTKNGKAINFAD---VKKIPGTVYPVVMIGGGASIEAVFDPEKMNNQPPPTFKPLMVVRSIL 209
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: A0A7S4Q9N0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q9N0_9DINO) HSP 1 Score: 97.4 bits (241), Expect = 4.980e-20 Identity = 62/163 (38.04%), Postives = 88/163 (53.99%), Query Frame = 2
Query: 194 VDRMRVSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSRRPPP-DGESDALLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTHAPPRKCQALVVGQDMI 679
V+ VSG G+ LG A VEQD+AYWEV + SLP GG+ +GV+R+ P D A + ++W + +A + EGDV+GVA +LP L F G PL G +V IRGTV PA V GGA +++AF + PP + L+ + ++
Sbjct: 58 VNGATVSGSGVVLGGAEVEQDAAYWEVRVVSLPEGGSCCMGVARQTVPLDAALSAPMRPGAEAGAAQSWALSS----LSASLMEGDVVGVAFGLGELPNLRFFCNGEPLEVG---SVTHIRGTVCPAFSVHGGAVLSVAFERDGFRYPPPARFTELIPTRSLL 213
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: A0A7S4QBI5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QBI5_9DINO) HSP 1 Score: 95.5 bits (236), Expect = 2.920e-19 Identity = 65/170 (38.24%), Postives = 87/170 (51.18%), Query Frame = 2
Query: 194 VDRMRVSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSR-------------RPPPDGESDAL-LGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTHAPPRKCQALV 661
+D VSG G+ LG A VEQD+AYWEV + +LP GG+ +GV+R RP P+ A L + +W + A+A + EGDV+GVA +LP L F G PL RG +V +RGTV PA V GGA +T+ F + PP K L+
Sbjct: 52 LDGDTVSGSGVVLGGAEVEQDAAYWEVRVVTLPEGGSCCMGVARQSVPLDAPLVAPARPDPEVLGAATDLAEAGAAPASVSWALSS----ASALLNEGDVVGVAFGQGELPNLRFFCNGEPLERG---SVAHVRGTVCPAFSVHGGAVLTVTFEHDGFRYTPPAKFTELI 214
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: F0Y3A2_AURAN (SPRY domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3A2_AURAN) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-17 Identity = 62/157 (39.49%), Postives = 83/157 (52.87%), Query Frame = 2
Query: 209 VSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSRRPPPDGESDALLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTHAPPRKCQALVVGQDMI 679
+ G G+A +EQD+AYWE+ + + G +GV R +A LG ++G+G+ +W + AAA EGDVIGVA +LP L F G L G V RIRG V+PA V+GGAK+ F HAPPR AL V Q++I
Sbjct: 47 LGGSGVAYTSTAIEQDAAYWELHVEAA---GPFRVGVCRE-----LGEAQLG-GELGDGQTSWALDS----AAAGAVEGDVIGVAFGQAELPNLSFFLNGELLEHG---MVNRIRGEVFPAASVTGGAKLRCVFDEANFEHAPPRTHSALRVTQNII 187
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: K0T616_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T616_THAOC) HSP 1 Score: 72.4 bits (176), Expect = 6.930e-11 Identity = 69/207 (33.33%), Postives = 90/207 (43.48%), Query Frame = 2
Query: 56 MGCCESIMRVILGGGTVDGGKAEIELGGSS-GPPFTMHGTLRGKN---VVVDRMRVSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSRRP------PPDGESDAL-----LGRSKIGEGEKTWGFCTSDGGAAAE-------------VKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGA 592
MG C S I GG E+ S+ G P HG R + + + +VSG GLAL PVEQD+AYWE+ ++ PG T G DGE D + K E ++ +G A+ ++ GDVIGVAL +DLPM+ G PL E + R RGTVYPAV + GA
Sbjct: 1 MGACCSCFDAITGGKHSGESSQEMTTRNSARGVPPASHGLSRAMSAPTISIQGFKVSGSGLALTRIPVEQDAAYWEIHVSI--PGQTAPSGDEDGDLQDVDVNDDGEEDPYAVKFGVATRKDREFYRSLETVEEEGDQASSRDDGTFLMRPISNLRHGDVIGVALQQSDLPMIQILLNGEPLL---ECIINRFRGTVYPAVYMPAGA 202
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: A0A1Z5JFB4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFB4_FISSO) HSP 1 Score: 68.9 bits (167), Expect = 5.290e-10 Identity = 58/167 (34.73%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 191 VVDRMRVSGDGLALGCAPVEQDSAYWEVAITSLPP-GGTVSLGVSRRPPPDGESDALLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGAKVTLAFAARELTH---APPRKCQALVVGQDMI 679
V D ++SG GL L VEQD+AYWE I P VS GV+ + D RS E + + + + +VK+GDV+G+A+ +DLPM+ F G PL +LAV R RG VYPA+ + +T+ F RE +P + L+V + +I
Sbjct: 44 VQDDCKMSGYGLGLVGVAVEQDAAYWEAHIQHDPGMSQEVSFGVATK------KDQQFYRSM--EEQDSADAKGTSLMRSIKVKDGDVVGIAVQQSDLPMVQFLLNGEPL---HDLAVNRFRGAVYPAIYLPENDGLTVRFVFRESEFEKLSPHARFGPLIVARGII 199
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: B8BUW6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUW6_THAPS) HSP 1 Score: 70.9 bits (172), Expect = 1.150e-9 Identity = 72/215 (33.49%), Postives = 95/215 (44.19%), Query Frame = 2
Query: 56 MGCCESIMRVILGG------GTVDGGKAEIELGGS-SGPPFTMHGTLRGKN---VVVDRMRVSGDGLALGCAPVEQDSAYWE--VAITSLP--PGGTVSLGVSRRPPPDGESDA-----------------LLGRSKIGEGEKTWGFCTSDGGAAA-----EVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGVSGGA 592
MG C S I GG G DG E+ S +G P HG R + + + +VSG GLAL P+EQD+AYWE V + LP P +GESD L ++ EG++T + D G A ++ DVIGVA+ +DLPM+ F G PL E + R RGTV+PAV + GA
Sbjct: 1 MGGCCSCFDGITGGKHGNDSGNSDGKSTEMATRNSIAGVPPPTHGVSRAMSAPTIQIQGYKVSGSGLALAKIPIEQDAAYWEWHVHLPGLPRPPXXXXXXDEFHDVQMNGESDDPYAIKFGVATRKDRNFYKLLQNVEDEGDET---SSQDDGTALMRAIPNLRHNDVIGVAVQQSDLPMIQFLLNGEPL---PECTINRFRGTVFPAVYIPVGA 209
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: A0A7S2PAN9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PAN9_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 9.060e-9 Identity = 53/151 (35.10%), Postives = 74/151 (49.01%), Query Frame = 2
Query: 209 VSGDGLALGCAPVEQDSAYWEVAI-TSLPPGGTVSLGVSRRPPPDGESDALLGRSKIG-EGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAV-----GVSGGAKVTLAFAARELTHAPP 640
V G GLAL VEQ+S YWE + T P TV +GVS R + + +L S + E T CT A+++K+GDVIG+ + ++LPM+ G D L V R RGTVYP++ G + T + + H PP
Sbjct: 91 VKGYGLALTDVSVEQESCYWEWRVRTGGNPTVTVMVGVSNRR--NSKFYEILASSSVPPEQHGTKFMCT-----ASDLKDGDVIGIVVQQSELPMIQLYVNGEIE---DGLQVTRFRGTVYPSIYLPQKGSNNDVSATFLYREEQYVHGPP 231
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Match: B8BT59_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT59_THAPS) HSP 1 Score: 62.0 bits (149), Expect = 1.630e-7 Identity = 52/164 (31.71%), Postives = 73/164 (44.51%), Query Frame = 2
Query: 182 KNVVVDRMRVSGDGLALGCAPVEQDSAYWEVAITSLPPGGTVSLGVSRRPPPDGESDA-------LLGRSKIGEGEKTWGFCTSDGGAAAEVKEGDVIGVALDFTDLPMLFFSRGGAPLGRGDELAVMRIRGTVYPAVGV----SGGAKVTLAFAARELTHAPP 640
K + V G GLAL VEQD AYWE + ++ VS PP G S+ +L S I E + F A + +K+GDV+GV + +++PM+ G D L V R RGTVYPA+ + G T+ + + H PP
Sbjct: 50 KTSIDSSSEVGGHGLALVDVAVEQDRAYWEFRVK-------MNACVSSWPPMFGVSNKRNAAFYKILAESTIPEEKHGTKFMC----AVSNLKDGDVVGVVVTQSEIPMIQIYLNGEIQ---DGLQVTRFRGTVYPAIYLPNCSEGFMSATMLYREDQFVHGPP 199 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig84.19775.1 >prot_F-serratus_M_contig84.19775.1 ID=prot_F-serratus_M_contig84.19775.1|Name=mRNA_F-serratus_M_contig84.19775.1|organism=Fucus serratus male|type=polypeptide|length=209bp MGCCESIMRVILGGGTVDGGKAEIELGGSSGPPFTMHGTLRGKNVVVDRMback to top mRNA from alignment at F-serratus_M_contig84:300742..305805- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig84.19775.1 ID=mRNA_F-serratus_M_contig84.19775.1|Name=mRNA_F-serratus_M_contig84.19775.1|organism=Fucus serratus male|type=mRNA|length=5064bp|location=Sequence derived from alignment at F-serratus_M_contig84:300742..305805- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig84:300742..305805- >mRNA_F-serratus_M_contig84.19775.1 ID=mRNA_F-serratus_M_contig84.19775.1|Name=mRNA_F-serratus_M_contig84.19775.1|organism=Fucus serratus male|type=CDS|length=1254bp|location=Sequence derived from alignment at F-serratus_M_contig84:300742..305805- (Fucus serratus male)back to top |