mRNA_F-serratus_M_contig823.19633.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig823.19633.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI) HSP 1 Score: 558 bits (1439), Expect = 2.660e-191 Identity = 322/578 (55.71%), Postives = 372/578 (64.36%), Query Frame = 1
Query: 73 LFSTAIHWIEFLPAESVAVCCIVCPRIREIAEKDRLWKHFCRQRWSHTNAGD---------------GNYRRAYASLNGWRNP--RLRRVILSTLHSPA-SGQSRTRASQANANNGGHAKNISAMDVGPSRVVVCSADYAWYYRVHPGNRDPQQYRRLRHERPPVGTALDASGGEDGRGGECGEASRP---------SMQLRGFPLPSSSVAEARLSGDEERCFFGTTSGHIYVHECR-DADLSQPHPHLQAR----WTPTVALVTPAGSPVAVRQVMANLEGGCPRGSRLGVLCRPPSGWQPDLNSVG-AGYLFLVDNRAQASTRSIKLGHGYLGGQKFPTSSRGGAAVSAATLSSEGMPFSPSG-GDLFAIGFSGGSIAVLDGRCGEGSGMVGGFVAAHRWLERVRCAGPLLMASYGRTKHIETWDIRMLPSRPLSRDGLAPLLQPPYYAPPAPPRLASLACAHGSPDFWVEPHGLTVAVYGAPRNSQRFGAKHAFWAWPK-IGDSAAQGWRPQSQATGFAG--GRVEM-----AIPGVVNDSDYRLCLSTGIKFVDTHMATVLDPSRVLVDEVVV 1680
L S+A HW+EFLPAE VA+CC VC +++ AE+DRLWK C +RW N G ++ AYASLNGWR+P RLRR ILST + A +G+ TR +Q A GG A NIS MDVGP RVVVCSAD+AWYY V G+ +Q R+ + ++D+ S LRGF LPSS V EAR SGD ERCFFGT SGHI+VH+C D D H + WTPT+AL +P GSPVAVRQV+A EGGCP GSRLGVLCRP WQP+L G GYLFLVD +AQA TR + LG G LGG FPT RGGAAVS A LSSEGMPF SG G+LFA+GF+GG++AV D RC EG GMVGGF HRWL+R+R AGPLLM SYGRTK+IETWD+R LPSR P L P APP LA LAC SPDFWVEPHGL VAV+GAPR+SQRFGAKHAFW WP+ G A P + A G G VE+ +PGVVNDS YR+CLSTG+KF DTHMATVLD SRVLVDE+ V
Sbjct: 16 LISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPP--PGLPSPRLR--APPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAV 589 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig823.19633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig823.19633.1 >prot_F-serratus_M_contig823.19633.1 ID=prot_F-serratus_M_contig823.19633.1|Name=mRNA_F-serratus_M_contig823.19633.1|organism=Fucus serratus male|type=polypeptide|length=547bp MENVHRDSSVGLFSTAIHWIEFLPAESVAVCCIVCPRIREIAEKDRLWKHback to top mRNA from alignment at F-serratus_M_contig823:280253..294725- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig823.19633.1 ID=mRNA_F-serratus_M_contig823.19633.1|Name=mRNA_F-serratus_M_contig823.19633.1|organism=Fucus serratus male|type=mRNA|length=14473bp|location=Sequence derived from alignment at F-serratus_M_contig823:280253..294725- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig823:280253..294725- >mRNA_F-serratus_M_contig823.19633.1 ID=mRNA_F-serratus_M_contig823.19633.1|Name=mRNA_F-serratus_M_contig823.19633.1|organism=Fucus serratus male|type=CDS|length=3282bp|location=Sequence derived from alignment at F-serratus_M_contig823:280253..294725- (Fucus serratus male)back to top |