mRNA_F-serratus_M_contig818.19595.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig818.19595.1
Unique NamemRNA_F-serratus_M_contig818.19595.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig818.19595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig818contigF-serratus_M_contig818:363551..363734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size165
Cds size162
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932435.3839242-CDS-F-serratus_M_contig818:363550..3636291622932435.3839242-CDS-F-serratus_M_contig818:363550..363629Fucus serratus maleCDSF-serratus_M_contig818 363551..363629 +
1690964307.7452905-CDS-F-serratus_M_contig818:363550..3636291690964307.7452905-CDS-F-serratus_M_contig818:363550..363629Fucus serratus maleCDSF-serratus_M_contig818 363551..363629 +
1622932435.4013867-CDS-F-serratus_M_contig818:363649..3637321622932435.4013867-CDS-F-serratus_M_contig818:363649..363732Fucus serratus maleCDSF-serratus_M_contig818 363650..363732 +
1690964307.754266-CDS-F-serratus_M_contig818:363649..3637321690964307.754266-CDS-F-serratus_M_contig818:363649..363732Fucus serratus maleCDSF-serratus_M_contig818 363650..363732 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig818.19595.1prot_F-serratus_M_contig818.19595.1Fucus serratus malepolypeptideF-serratus_M_contig818 363551..363732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig818.19595.1

>prot_F-serratus_M_contig818.19595.1 ID=prot_F-serratus_M_contig818.19595.1|Name=mRNA_F-serratus_M_contig818.19595.1|organism=Fucus serratus male|type=polypeptide|length=54bp
DDHPTGNQGQTLLRSISKLQTWHLTQHLAKAKPGALIAPDVTPMLHSPLT
SIGQ
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mRNA from alignment at F-serratus_M_contig818:363551..363734+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig818.19595.1 ID=mRNA_F-serratus_M_contig818.19595.1|Name=mRNA_F-serratus_M_contig818.19595.1|organism=Fucus serratus male|type=mRNA|length=184bp|location=Sequence derived from alignment at F-serratus_M_contig818:363551..363734+ (Fucus serratus male)
GATGACCATCCGACAGGTAATCAAGGGCAAACGCTGTTAAGGTCTATAAG
TAAACTTCAGACTTGGCATTTAACTCAGCGCTTCAATCATAGATTTAAGA
TTTAGCAAAAGCCAAACCGGGGGCCTTGATAGCCCCAGATGTCACCCCAA
TGTTGCACAGCCCTCTTACCAGCATTGGTCAACT
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Coding sequence (CDS) from alignment at F-serratus_M_contig818:363551..363734+

>mRNA_F-serratus_M_contig818.19595.1 ID=mRNA_F-serratus_M_contig818.19595.1|Name=mRNA_F-serratus_M_contig818.19595.1|organism=Fucus serratus male|type=CDS|length=324bp|location=Sequence derived from alignment at F-serratus_M_contig818:363551..363734+ (Fucus serratus male)
GATGACCATCCGACAGGTAATCAAGGGCAAACGCTGTTAAGGTCTATAAG
TAAACTTCAGACTTGGCATTTAACTCAGCGATGACCATCCGACAGGTAAT
CAAGGGCAAACGCTGTTAAGGTCTATAAGTAAACTTCAGACTTGGCATTT
AACTCAGCATTTAGCAAAAGCCAAACCGGGGGCCTTGATAGCCCCAGATG
TCACCCCAATGTTGCACAGCCCTCTTACCAGCATTGGTCAAATTTAGCAA
AAGCCAAACCGGGGGCCTTGATAGCCCCAGATGTCACCCCAATGTTGCAC
AGCCCTCTTACCAGCATTGGTCAA
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