mRNA_F-serratus_M_contig8148.19562.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: D7FUV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV8_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.230e-50 Identity = 91/133 (68.42%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNA-----KRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRR 402
+RP+ETPKDLKKRV L+KSL SVH+RL+QTEKQIFDLERSYLEETRLYGNVLQGWDAYL++KGKG + + GG+ GG + SE KRAKGVEL+ERLFSLGSVTSPAAKG+ K ED RR
Sbjct: 16 VRPSETPKDLKKRVRGLDKSLTSVHERLVQTEKQIFDLERSYLEETRLYGNVLQGWDAYLDTKGKGVADGGKGEAAAGGRGGGNKREAASEGEEGEGANKRAKGVELEERLFSLGSVTSPAAKGLQKLEDARR 148
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A6H5KBZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ7_9PHAE) HSP 1 Score: 119 bits (299), Expect = 5.830e-32 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKG-----KGEIA 231
+RP+ETPKDLKKRV L+KSL SVH+RL+QTEKQIFDLERSYLEETRLYGNVLQGWDAYL++KGKG KGE A
Sbjct: 16 VRPSETPKDLKKRVRGLDKSLTSVHERLVQTEKQIFDLERSYLEETRLYGNVLQGWDAYLDTKGKGVAAGGKGEAA 91
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A484KC30_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KC30_9ASTE) HSP 1 Score: 64.3 bits (155), Expect = 3.030e-10 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1
Query: 67 LNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAK--GIHKQEDKRRTSGRQGDAGG 432
LNK + + L + EKQ++DLE SYL+E+ +GN L+G++ +L S K N KR++ +L++RLFSL SVTSPAA+ G+ +++ K S + AGG
Sbjct: 19 LNKK-QKLQEELRKVEKQVYDLETSYLQESGTFGNALRGFEGFLSSSNKNS-------------------------NLKRSRKFQLEDRLFSLSSVTSPAAEELGLRREDGKLDHSQGRSKAGG 116
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: UPI001C277A45 (chromatin modification-related protein eaf6-like n=3 Tax=Salvia TaxID=21880 RepID=UPI001C277A45) HSP 1 Score: 64.7 bits (156), Expect = 4.500e-10 Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
LR + PK + +++L + D L EKQ+++LE SYL+ET +GNVL+G+D +L S S N KR++ +L++R+FSL SVTSPAA
Sbjct: 6 LRGSNNPKAM---LSSLLNKREKLQDELRSVEKQVYELETSYLQETTTFGNVLKGFDGFLSSS-------------------------KSASNLKRSRKFQLEDRVFSLSSVTSPAA 94
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A022PPS1_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PPS1_ERYGU) HSP 1 Score: 64.3 bits (155), Expect = 6.300e-10 Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
LR + PK + +++L K +H+ L E Q+++LE SYL+ET +GNVL+G+D +L S + N KR++ ++++R+FSL SVTSPAA
Sbjct: 6 LRSSNNPKLM---LSSLLKKREKLHNELRSVENQVYELETSYLQETNTFGNVLKGFDGFLSSS-------------------------KNTTNLKRSRKFQIEDRVFSLSSVTSPAA 94
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A484KJQ9_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KJQ9_9ASTE) HSP 1 Score: 61.6 bits (148), Expect = 7.500e-9 Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 88 VHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAK--GIHKQEDK 396
+ D L + EKQ+++LE SYL+E+ +GN L+G++ +L S K N KR++ +L++RLFSL SVTSPAA+ G+ +++ K
Sbjct: 25 LQDELRKVEKQVYELETSYLQESGTFGNALRGFEGFLSSLNKNS-------------------------NLKRSRKFQLEDRLFSLSSVTSPAAEELGLRREDGK 104
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: E9GD93_DAPPU (Chromatin modification-related protein MEAF6 n=2 Tax=Daphnia TaxID=6668 RepID=E9GD93_DAPPU) HSP 1 Score: 60.8 bits (146), Expect = 1.380e-8 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 43 DLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNA-KRAKGVELQERLFSLGSVTSPAA-KGIHKQEDKR--RTSGRQGDAGGSG 438
DL+ ++ L K V + L E+QI+ E SYLE+T+LYGN+++GWD YL S SK+S ++ KR + + ERLFS S+TS AA GI +R R+S + AG SG
Sbjct: 9 DLRSELSDLVKRRIEVAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLNS-----------------------TSKLSNPSSDKRNRKFKENERLFSKSSITSMAAVSGIIDLNSERAERSSETESQAGMSG 121
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A7N0VKN8_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VKN8_KALFE) HSP 1 Score: 59.3 bits (142), Expect = 4.700e-8 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 1
Query: 88 VHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRR 402
+H+ L EKQ+++LE SYL+++ GNVL+G++ YL S + N KR++ + ++RLFSL SVTSPAA+ + D R
Sbjct: 26 LHEELRSIEKQVYELETSYLQDSSHIGNVLKGYEGYLSSS-------------------------KNAPNMKRSRKFQTEDRLFSLSSVTSPAAEELRNGRDDGR 105
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A830BBD4_9LAMI (Chromatin modification-related protein meaf6 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BBD4_9LAMI) HSP 1 Score: 59.3 bits (142), Expect = 4.880e-8 Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
LR + PK + +++L + + L EKQ+++LE SYL+ET +GN +G+D +L S + N KR++ +L++R+FSL SVTSPAA
Sbjct: 6 LRGSNNPKAM---LSSLLNKREKLQNELRSVEKQVYELETSYLQETNTFGNAFKGFDGFLSSS-------------------------KNTANIKRSRKFQLEDRVFSLSSVTSPAA 94
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A6J1KUD2_CUCMA (chromatin modification-related protein MEAF6-like isoform X1 n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1KUD2_CUCMA) HSP 1 Score: 59.3 bits (142), Expect = 4.970e-8 Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 82 ASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRRT 405
A +HD L EKQ++D+E +YL++ GNVL+G++ +L ASK S L KR++ +L +RLFSL SVTSPAA+ + D R+
Sbjct: 24 AKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLS------------------------ASKNSAL-LKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRS 106 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8148.19562.1 >prot_F-serratus_M_contig8148.19562.1 ID=prot_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=polypeptide|length=167bp MGINTTLRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEback to top mRNA from alignment at F-serratus_M_contig8148:3587..9345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8148.19562.1 ID=mRNA_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=mRNA|length=5759bp|location=Sequence derived from alignment at F-serratus_M_contig8148:3587..9345- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8148:3587..9345- >mRNA_F-serratus_M_contig8148.19562.1 ID=mRNA_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig8148:3587..9345- (Fucus serratus male)back to top |