mRNA_F-serratus_M_contig808.19480.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A6H5L1F6_9PHAE (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE) HSP 1 Score: 353 bits (906), Expect = 2.770e-117 Identity = 178/291 (61.17%), Postives = 209/291 (71.82%), Query Frame = 1
Query: 34 DRVSLRAHLTSAPWITWPCAA-LGVGLCCFSIASLRRRTKTCEATKSTGGMPSDDIIPVGTPHPEWVPGLEQSPPEKLGEDHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRPSV 903
R+ +R S+ W+ C +GVG + ++S R R KT + + + HP W+PG +Q PP HV +DP D SCY LMIS+VVPRPI ST A DGTVN APFSYFNTVGHDPP L +SVCR G KKDTL N+ +GEFVVSI+S+WFVEAANHTCG+FPPEVDEM+VAGLTP++S IV+PPR+KESAVNMECKVRHTYDIVN G+ TTTVVFGEVVMFHV HLL E GAG GKPT+ EG PM+RLGGNTYGRLGSVF++ RP V
Sbjct: 7 SRMYMRVPQASSGWVVLGCGVGMGVG---YLLSSRRSRRKTLDRSNLST-------------HPSWIPGDKQPPPGGEDTGHVRIDPRDLKSCYSLMISSVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFTHLLKENGAGEGKPTVNHEGLMPMSRLGGNTYGRLGSVFDISRPRV 281
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: D7G8R2_ECTSI (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.170e-97 Identity = 149/212 (70.28%), Postives = 168/212 (79.25%), Query Frame = 1
Query: 289 PLDCTS--CYPLMISA-----VVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRPSV 903
PL C S C L++ VVPRPI ST A DGTVN APFSYFNTVGHDPP L +SVCR G KKDTL N+ +GEFVVSI+S+WFVEAANHTCG+ PPEVDEM+VAGLTP++S IV+PPR+KESAVNMECKVRHTYDIVN G+ TTTVVFGEVVMFHV HLL E GAG GKPT+ EG P++RLGGNTYGRLGSVF++ RP V
Sbjct: 28 PLGCFSVPCPSLLVHTPVAHQVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGLMPISRLGGNTYGRLGSVFDIPRPRV 239
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: L1IE62_GUITC (Flavin_Reduct domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC) HSP 1 Score: 278 bits (712), Expect = 2.640e-88 Identity = 135/233 (57.94%), Postives = 167/233 (71.67%), Query Frame = 1
Query: 196 IIPVGTPHPEWVPGLEQSPPEKLGEDHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRR 894
++ PHP W G Q P HV L P + SCYPL+ISA VPRPI VS+K+ G VN+AP+SY + HDPP +V+S CRK GDV KDTL NI DT EFVV+I+SEW+ E+ANHTCGNFPPEV+EM+VAGLTPL S I+SPPRV ESA+N EC++ H YD+ N G+ TTTVV GE+V FHV +L+ GAG GKPT+ + KP++RLGG TYGR +VF+L R
Sbjct: 28 VVKESPPHPSWKAGENQ--PIPYPGRHVTLLPSELKSCYPLIISAYVPRPIALVSSKSAAGHVNVAPYSYTGAISHDPPAIVVSCCRKAGDVMKDTLANILDTKEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRLIHQYDMKNAQGKVTTTVVIGEIVAFHVHEGVLEMNGAGEGKPTVNFDALKPLSRLGGCTYGRTTAVFDLPR 258
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A7S0L4A2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4A2_9EUKA) HSP 1 Score: 265 bits (677), Expect = 5.020e-83 Identity = 140/244 (57.38%), Postives = 165/244 (67.62%), Query Frame = 1
Query: 175 GGMPSDDIIPV-GTPHPEWVPGLEQSPPEKLGEDHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKG--GDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRP 897
G + S + V PH W PG +Q P + G V L P D SCYPLMISA VPRPI FVST + G NLAPFSY V HDPP + +S+CR G D KKDTL NI+DTGEFVV I+SEWFVEAANHTCG+F VDE + +GLT L S IV PPRV ESAV+ ECK+ ++I+N G +T TVVFGEVV + DE GAG GKPTIK + Y+ +ARLGGNTYGR+ S F+L RP
Sbjct: 15 GDVASPTTVAVTAPPHEGWKPGEKQPLPFEGG--FVELIPSDLKSCYPLMISAYVPRPIAFVSTVSASGKGNLAPFSYSGCVAHDPPTIAVSICRNGRAADGKKDTLANIDDTGEFVVCIMSEWFVEAANHTCGSFERGVDEFDESGLTRLPSSIVKPPRVGESAVHFECKLSQRHEIINKAGVTTATVVFGEVVKVWAAKGVCDENGAGEGKPTIKFDNYRALARLGGNTYGRVTSTFDLDRP 256
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A835ZDF3_9STRA (Flavin_Reduct domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF3_9STRA) HSP 1 Score: 263 bits (672), Expect = 3.230e-82 Identity = 132/238 (55.46%), Postives = 166/238 (69.75%), Query Frame = 1
Query: 196 IIPVGTPHPEWVPGLEQSPPEKLGE-DHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRPSVK 906
+ TPHPEW PG Q P G+ + V LDP SCY L+IS+ VPRPI FVS+ +G NLAPFSYFN V HDPP++ I +CRK G+ KKD+L NIE GEFVVSI+S+WF+E+ANH CG+F +VDEM ++GLT + IV PP V ESA+NMECK+ H Y++ N G TTTVV G+VVMFHVL +LD G KPT+ + +P+ARLGGNTYG + +VF+L RP K
Sbjct: 32 VTTTTTPHPEWQPGQNQ--PHPYGDSERVALDPAALASCYGLVISSGVPRPIAFVSSLDSEGRRNLAPFSYFNFVAHDPPLVAIGICRKRGE-KKDSLANIEARGEFVVSIMSDWFIESANHCCGDFSSDVDEMALSGLTAARAKIVEPPLVAESAINMECKLVHKYEVKNAAGTDTTTVVIGQVVMFHVLEAVLDTVTHGPTKPTVHFDKLRPIARLGGNTYGIVNTVFDLPRPDRK 266
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A7S4C094_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C094_CHRCT) HSP 1 Score: 248 bits (634), Expect = 2.170e-76 Identity = 132/259 (50.97%), Postives = 168/259 (64.86%), Query Frame = 1
Query: 133 LRRRTKTCEATKSTGGMPSDDIIPVGTPHPEWVPGLEQSPPEKLGEDHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCR-KGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRPSVK 906
LR+ + A +T G P PHP W PG +Q P + +D V LDP + SCYPL+IS+ VPRPI FVST + G NLAPFSY V HDPP +V+ +CR + D KKDTL NI+ TGEFVV I+SEWFVEAANH C F VDE + +GLT + S V PPRV ESA++ EC +RH +++VN G T+T+V GEVVM H + + GAG GKPTI ++P++RLGG+TYGR S+F+L RP K
Sbjct: 24 LRQLSGISAAYTATAGPP---------PHPRWNPGEKQPLPFQT-KDFVALDPKELKSCYPLVISSYVPRPIAFVSTLSASGEGNLAPFSYSGVVAHDPPTIVVGICRGRNADGKKDTLANIDATGEFVVCIMSEWFVEAANHCCSAFERGVDEFDQSGLTRVPSTRVKPPRVGESAMHYECVLRHRHEVVNASGVVTSTMVVGEVVMMHAASAVCNVDGAGEGKPTIDFAKFQPISRLGGDTYGRTLSMFDLPRPDRK 272
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: C1N2T0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N2T0_MICPC) HSP 1 Score: 244 bits (623), Expect = 1.240e-75 Identity = 121/210 (57.62%), Postives = 147/210 (70.00%), Query Frame = 1
Query: 277 VPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAG---HGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRP 897
+P DP D SCYPLMISAVVPRPI FVS+ + DG NL+PFSY + HDPP ++ S CRK G KKDT NIE T EFVV ++SEWFV AANHTCGNF E DE +++GLT + S V PPRVKESA +MECK+RH+YD+ N G T T + GEVVMFH+ EA A GKP + + Y P+ RLGG+TYGR+GS ++L RP
Sbjct: 2 LPFDPKDLKSCYPLMISAVVPRPIAFVSSLSADGVGNLSPFSYATVISHDPPCVMFSACRKPGGAKKDTWANIEATKEFVVCVMSEWFVNAANHTCGNFDAEDDEFDLSGLTRVPSAKVKPPRVKESAFHMECKLRHSYDVTNADGVVTATAIVGEVVMFHI-----HEAVANVEWEGKPRVDMARYAPVCRLGGDTYGRVGSGYDLPRP 206
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A061SEF3_9CHLO (Flavo protein oxygenase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEF3_9CHLO) HSP 1 Score: 244 bits (622), Expect = 1.450e-74 Identity = 128/246 (52.03%), Postives = 163/246 (66.26%), Query Frame = 1
Query: 184 PSDDIIPVGTP-HPEWVPGLEQSPPEKLGEDHVPLDP--LDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKGGDV--KKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRPSVK 906
PSD + P G P HP+W G E PP GE+ + LDP L YPL+ISAVVPRPI FV T + G NLAPFSYF + HDPP + I +CR KKDTL NI T EF ++++SEWFVE+ANHTCG F +VDE+ +AGLTPL S+ V+PPRVKES+V++ECK+ HTY++ N G T T+V G VVMFHV + + +G+ + + YKP++RLGGNTYGR F+L RP K
Sbjct: 34 PSDWLPPSGDPPHPDWKVG-ENQPPPFSGEEMMALDPSELGGARAYPLVISAVVPRPIAFVCTLSAAGVRNLAPFSYFGAMSHDPPHVCIGICRSRSKATGKKDTLANILATKEFTLNMMSEWFVESANHTCGEFDDDVDELSLAGLTPLPSLKVAPPRVKESSVHLECKLVHTYEVRNEYGVVTATIVIGRVVMFHVHKEVAGKTPSGN--VIVDFQRYKPVSRLGGNTYGRTAGTFDLPRPDRK 276
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A5B8MV84_9CHLO (Flavin_Reduct domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MV84_9CHLO) HSP 1 Score: 243 bits (621), Expect = 2.400e-74 Identity = 125/233 (53.65%), Postives = 162/233 (69.53%), Query Frame = 1
Query: 214 PHPEWVPGLEQSPPEKLGEDH-VPLDP--LDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCRKG--GDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRP 897
PHP W P + + P+ + E V LDP + CYPL+ISAVVPRP+ FVST + DG NLAPFSYF T HDPP +++ +CR G G KKDT+ NI+DT EF V+++SEWF+E ANHTCGN+ PEVDEM ++GLT L S+ V PPRVKESAV+MECK++H Y+ + GE T TVV GE+VMFHV + + +G + L+ +P++RLGGNTYGR F+L RP
Sbjct: 47 PHPNWEPPQQLAIPDHIEESKMVALDPKVIGGKKCYPLIISAVVPRPVAFVSTVSKDGKQNLAPFSYF-TAMHDPPCVILCICRAGHRGGGKKDTMENIDDTKEFTVNVLSEWFLEQANHTCGNYDPEVDEMALSGLTKLPSLKVKPPRVKESAVHMECKLKHKYETKGYDGEDTATVVVGEIVMFHVNEGVARKTPSG--STYVGLDELQPISRLGGNTYGRSRECFDLARP 276
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Match: A0A8J6C7I8_DIALT (Flavin_Reduct domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7I8_DIALT) HSP 1 Score: 237 bits (604), Expect = 7.180e-72 Identity = 120/230 (52.17%), Postives = 153/230 (66.52%), Query Frame = 1
Query: 214 PHPEWVPGLEQSPPEKLGEDHVPLDPLDCTSCYPLMISAVVPRPIGFVSTKAVDGTVNLAPFSYFNTVGHDPPMLVISVCR--KGGDVKKDTLTNIEDTGEFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKVRHTYDIVNHMGESTTTVVFGEVVMFHVLPHLLDEAGAGHGKPTIKLEGYKPMARLGGNTYGRLGSVFELRRP 897
PHP W P + PP HV LDP SCYPLMISA VPRPI FVST++ NLAPFSY HDPP + SV + D KKDTL NI+++GEFVV ++SEW+VEAANH CG FP DE +++GLT + S+ V PPRV E+AV ECK+ H +++ N GE + T++ GEVVM H+ + + GAG GKPT++ + +PM+RLGGNTYGR S F+L RP
Sbjct: 43 PHPLWAPP-QPMPPPFADASHVSLDPTALASCYPLMISAFVPRPIAFVSTRSDKYGGNLAPFSYAGLFNHDPPTVGFSVVSNARAPDGKKDTLANIDESGEFVVHVMSEWYVEAANHCCGAFPRGEDEFDLSGLTRVPSLKVGPPRVGEAAVAFECKLAHRHEMRNAKGEVSATLILGEVVMIHLAAGVCELDGAGAGKPTVRFDALQPMSRLGGNTYGRTTSTFDLPRP 271 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig808.19480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig808.19480.1 >prot_F-serratus_M_contig808.19480.1 ID=prot_F-serratus_M_contig808.19480.1|Name=mRNA_F-serratus_M_contig808.19480.1|organism=Fucus serratus male|type=polypeptide|length=301bp MSRALSHIGDRVSLRAHLTSAPWITWPCAALGVGLCCFSIASLRRRTKTCback to top mRNA from alignment at F-serratus_M_contig808:323176..333710- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig808.19480.1 ID=mRNA_F-serratus_M_contig808.19480.1|Name=mRNA_F-serratus_M_contig808.19480.1|organism=Fucus serratus male|type=mRNA|length=10535bp|location=Sequence derived from alignment at F-serratus_M_contig808:323176..333710- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig808:323176..333710- >mRNA_F-serratus_M_contig808.19480.1 ID=mRNA_F-serratus_M_contig808.19480.1|Name=mRNA_F-serratus_M_contig808.19480.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig808:323176..333710- (Fucus serratus male)back to top |