mRNA_F-serratus_M_contig802.19430.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig802.19430.1
Unique NamemRNA_F-serratus_M_contig802.19430.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 303 bits (777), Expect = 4.230e-103
Identity = 151/192 (78.65%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGRRVGHK R  P S NVYL LLVKL+RFLARRTDS F KVVL+RLYMSRTNR PLS+SRLAR+M+DK+E TAVIVGT+TDD RLLEVPK+SVCAL+FTETARARIL +GGEC+TFDQLALR PKGS TVLLRGPK  RE  KHFGHR+T  ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct:    1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 293 bits (750), Expect = 5.480e-99
Identity = 147/192 (76.56%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGRRVGHKVR +P SKNVYL LLV+L+RFLARRTDS F KVVL+RLYMS+TN  P+S+SRL RYM+ KE+ TAVIVGT+TDD RLL++P L VCALKFTE ARARIL AGGE +TFDQLAL+ PKG+ TVLLRGPK+AREAV+HFGHR+T++++HTH  VKPYVRSKGRKFEKARGRR S GFKV
Sbjct:    1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 289 bits (740), Expect = 1.830e-97
Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGID+VAGGRRVGHK R    S+NVYL LLVKL+RFLARRTDSAF K VL+RL+MSRTNR PLSLS LAR+MR+K++  AV+VGTITDD R+L VPK++VCAL+FTETARARI+ AGGEC+TFDQLALR PKGSNTVLLRGPK ARE   HFGHR+T  ++ TH  VKPYVR+KGRKFEKARGRR S GFKV
Sbjct:    1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 288 bits (737), Expect = 5.230e-97
Identity = 144/192 (75.00%), Postives = 166/192 (86.46%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDLVAGGRRVGHK R AP S NVYLGLL KL++FLARRT+S F   VL+RLYMS+TNR PL L RL+++M  K+  TAV+V T+TDD RLLEVPK++VCAL+FTE+AR+RI+AAGGEC+TFDQLAL+ P GSN VLLRGPK+AREA +HFGHRTTV N HTH+ VKPYVRSKGRKFEKARGRR SNGFKV
Sbjct:    1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.610e-93
Identity = 142/192 (73.96%), Postives = 162/192 (84.38%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL +GGRR GHK R AP S NVYL LLVKL+RFLARRTDS F  V+L+RL+MS+ NR P+++SRL R+M+ KE  TAVIVGTITDD R+LEVPKLSV ALK T TARARIL AGGE +TFD+LALR PKG+N VLLRGP D REA+ HFGHR+TV N+HTHD+VKPY RSKGRKFEKARGRRRS GFK+
Sbjct:    1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA)

HSP 1 Score: 276 bits (706), Expect = 4.140e-92
Identity = 143/194 (73.71%), Postives = 163/194 (84.02%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEEN--TAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDLVAGGRRVGHKVR AP S NVYL LLVKL+ FLARRT S F K V +RL+MS+TN+ P+S+S++A+YM  +E    TAVIVGT+TDD+RL E+P L VCAL+FTE ARARI+ AGGEC+TFDQLAL  PKGSN VLLRG  + REA+KHFGHR TV NLHTHD+VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct:   12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 271 bits (692), Expect = 1.050e-90
Identity = 137/157 (87.26%), Postives = 150/157 (95.54%), Query Frame = 1 
Query:  106 FLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            FL RRTDSAFAKVVL+RLYMS+TNRAPLSLSRL   +R+KE +TAV+VGT+TDDVRLL VPKLSVCAL+FTETARARILAAGGECITFDQLALR PKG+NTVLLRGPK+AREAV+HFGH+TTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct:    2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRL---VRNKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.590e-90
Identity = 136/191 (71.20%), Postives = 160/191 (83.77%), Query Frame = 1 
Query:    4 GIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            GIDL+AGG+ VG K R AP S+NVYL LLV+L+RFLARRT+S F  +VLRRLY S TN+AP+S+ R+ARYM   E   AVIVGT+TDD+RLL VPK+SV AL FTETARARI  AGGEC++FDQLALR PKG+NTVLLRG + ARE  +HFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct:   12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A2D4C5G9_PYTIN (60S ribosomal protein L182 putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C5G9_PYTIN)

HSP 1 Score: 270 bits (689), Expect = 1.060e-89
Identity = 131/192 (68.23%), Postives = 162/192 (84.38%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL+AGG+ VG K R AP SK+VYL LLV+L+RFLARRTDS F  +VL+RLY S TN+ P+S++R+ARYM+D E   AV+VG++TDD+RL +VPKL++ AL+FTETARARI+ AGGEC+TFDQLALR PKG+NTVLLRG K ARE  KHFGH++T+ ++ TH   KPYVRSKGRKFE+ARGRR+S GFKV
Sbjct:    1 MGIDLIAGGKVVGKKSRTAPKSKDVYLNLLVRLYRFLARRTDSKFNSIVLKRLYQSNTNQVPMSIARVARYMKDHEGKIAVVVGSVTDDIRLFDVPKLTIAALRFTETARARIVKAGGECLTFDQLALRAPKGANTVLLRGRKTAREVYKHFGHKSTLESVGTHCGAKPYVRSKGRKFERARGRRKSRGFKV 192
[Close]
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.450e-89
Identity = 137/192 (71.35%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:    1 MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVLRRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSVCALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGR+V HK RKAP S+NVYL LLVKL+ FL+RRTDS F KVVL+RLYMS+ N+ P+S+S++AR+M   E+  AVIVG +TDDVRL E+PKL VCAL+FT  ARARIL AGGEC+TFDQLAL  P GS TVLLRG K+ REA+KHFGH+T+V + HTHD+VKPY+R+KGRKFE+ARGRRRSNGFKV
Sbjct:   11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig802.19430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NFY8_9STRA4.230e-10378.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UVJ6_9STRA5.480e-9976.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y951_AURAN1.830e-9775.52Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A835ZAE3_9STRA5.230e-9775.00Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
A0A4D9D1Z3_9STRA1.610e-9373.96Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A7S2BC13_9STRA4.140e-9273.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8D0ZR79_PIG1.050e-9087.26Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A5D6XV36_9STRA2.590e-9071.20Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A2D4C5G9_PYTIN1.060e-8968.2360S ribosomal protein L182 putative n=2 Tax=Pythiu... [more]
A0A7S2W9J6_9STRA1.450e-8971.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig802contigF-serratus_M_contig802:358737..365978 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.0
Seed ortholog evalue4.6e-92
Seed eggNOG ortholog2880.D7FML2
Preferred nameRPL18
KEGG koko:K02883,ko:K18749,ko:K21442
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0031090,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055044,GO:0071704,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.ribosomal protein
EggNOG OGsCOG1727@1,KOG1714@2759
Ec32 ortholog descriptioncytoplasmic ribosomal protein L18
Ec32 orthologEc-23_000720.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko04131
Exons3
Model size576
Cds size576
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig802.19430.1prot_F-serratus_M_contig802.19430.1Fucus serratus malepolypeptideF-serratus_M_contig802 358737..365978 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932399.1161451-CDS-F-serratus_M_contig802:358736..3588421622932399.1161451-CDS-F-serratus_M_contig802:358736..358842Fucus serratus maleCDSF-serratus_M_contig802 358737..358842 -
1690964290.0240312-CDS-F-serratus_M_contig802:358736..3588421690964290.0240312-CDS-F-serratus_M_contig802:358736..358842Fucus serratus maleCDSF-serratus_M_contig802 358737..358842 -
1622932399.1289034-CDS-F-serratus_M_contig802:359362..3595341622932399.1289034-CDS-F-serratus_M_contig802:359362..359534Fucus serratus maleCDSF-serratus_M_contig802 359363..359534 -
1690964290.0406022-CDS-F-serratus_M_contig802:359362..3595341690964290.0406022-CDS-F-serratus_M_contig802:359362..359534Fucus serratus maleCDSF-serratus_M_contig802 359363..359534 -
1622932399.141131-CDS-F-serratus_M_contig802:365680..3659781622932399.141131-CDS-F-serratus_M_contig802:365680..365978Fucus serratus maleCDSF-serratus_M_contig802 365681..365978 -
1690964290.0575523-CDS-F-serratus_M_contig802:365680..3659781690964290.0575523-CDS-F-serratus_M_contig802:365680..365978Fucus serratus maleCDSF-serratus_M_contig802 365681..365978 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig802.19430.1

>prot_F-serratus_M_contig802.19430.1 ID=prot_F-serratus_M_contig802.19430.1|Name=mRNA_F-serratus_M_contig802.19430.1|organism=Fucus serratus male|type=polypeptide|length=192bp
MGIDLVAGGRRVGHKVRKAPASKNVYLGLLVKLFRFLARRTDSAFAKVVL
RRLYMSRTNRAPLSLSRLARYMRDKEENTAVIVGTITDDVRLLEVPKLSV
CALKFTETARARILAAGGECITFDQLALRCPKGSNTVLLRGPKDAREAVK
HFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV
back to top

mRNA from alignment at F-serratus_M_contig802:358737..365978-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig802.19430.1 ID=mRNA_F-serratus_M_contig802.19430.1|Name=mRNA_F-serratus_M_contig802.19430.1|organism=Fucus serratus male|type=mRNA|length=7242bp|location=Sequence derived from alignment at F-serratus_M_contig802:358737..365978- (Fucus serratus male)
ATGGGTATTGATCTGGTGGCTGGTGGGCGCCGTGTTGGCCATAAAGTCCG
CAAGGCGCCGGCGTCTAAGAATGTTTACCTTGGACTGCTAGTGAAGCTTT
TCAGGTTCCTCGCCAGGCGGACCGATAGCGCCTTTGCGAAGGTGGTCCTT
AGGCGCCTGTACATGTCCAGGACCAACCGTGCCCCGCTCTCTCTCTCTCG
TCTGGCACGGTACATGAGGGATAAGGAGGAGAATACTGCGGTCATCGTGG
GGACCATCACGGATGATGTACGCCTCCTTGAGGTGCCCAAGCTATCTGGT
GAGCAATACGAGGCCACGAAATTTTGATGTACCATTTGACTAAGTGAGTG
GCGCCTAGGTCCTCACTCGTAAGGCCTCCAAGAAGCCCAACTATTTGACG
CATACTTCTCTCCATTATCTTATATTACTGTTTGCCTCCAGCGCAGTGCA
ATTCCCAATCTTAAACTTCGTCTGAGATCCGATCCTGGGGTCCAGATACT
ATCAATAGTGATGATTGCCTCGTTGTAACCACACCCACTCCTTTTCGACA
TGTGTACTTGTACTCGTATGGTGGCACCTACAGTTCAAGTAATATATAAA
TATATACCGGTTATAGCAATAATAGCATATCTTTTTTTGTTCGTCGTTTT
GGACTACTAGACTATGCAGTGCCACACTTCTCTAATATTTAAAGTTGTTA
CTGCCTCTTAGCTTTTTACTATCGGTGTAGACTTTTAATATAGCGAGAGA
CTCCGGCCGCAAAACATGGGCATGGACAAGACCGAATTGCGACCCGTGAC
ACCATGCATATCAATCGGTACTGGCAGCGCAGAACAGCTCTAAACTCCCG
CCATAATTTATATAGTTAAGTCTTCGGGTCTCTAGCTTGCTCACGGTAGT
TTAGATTGATCGATCGATTGAATTCTCGCGTAAGCTCATTTAAAAAATCC
AGACCGTGGTCATACTTGTACGGTAGAAAAACACCATCCAGAACGGAAAA
ACGCTCGACTTACTCTCAAACAGGAAACGGCAATGGTACAAAAATACTCA
GAAAAAGGGATATGTCCGAACTATTAATAACAAAAAAACAAACTACAAAG
TAGGATGCAAACAGTTGTTAGGTAACTGCTTGTGCCAGGTGGTCAATATG
ATTTGTGACGCTGGTTGATACAGAGCAGATCCTCCGAATCATCATCTTAT
CTCGAGAATATGAACAGTATCTACTGCAAAAGTTGTCCGCCCTACTTTCC
TTGGATATGAAGATGCTTTGCCTATACGCTAGGCTGGTATGAGCTCCAGC
TCCAGGGTGCTCCGAGCATCTGCCGTATCTTGACCTACTCTGGTACCATG
TACAAAAAACTTTTTGTTTACCCACTGAAAACGTTTTCTCTCCCTACCAC
GTGCGGGACATTACTTTCTACATGGCCACTACTATACAGCTCTTTACACG
AATCTTCCCAACACAAGTTGTATCACTGTGCACTCTCAACCCACTTTGTA
TAAAGTCCTGCTTTAGGCACAACCCTCCTGTCAAATGTACCTCATACTGC
TCGTACCGGTCGCCCCGGTGGTTCAGTTGGTAACCTCAAAACCTTCTGAC
GTAGGGACGTGAGTTCGAATCTCGGTGCAGTCACACAAACTGGAATTTTC
CCCTCTAAAAATTAATATATACCAGGTACCAGGTATATATATTAAAATCA
CGCCGAACAAGGGGAGATCGATTGATTCGTGGGTACCCAAAGTCCGACTT
CACGGTCGAGGAGGGAAAAGCACGGGGGCTGAATCCATCTCGCGATAAAA
ACTACACTGCAGAAGGAAGGTGGATAGATCCTTTGTGACCCTTCTCCTGT
GTGACCCCGGCTGGTGCGTCCACAAGCCTGACGTCCAAAGTAAATGGGAG
AACACACACACATTGATGTTGTACTTGCATGATTTGGAGTTTTTCGGTTC
TCGGGAACACCACACCTAGACTACAATGTGTGTTTCTCATCCCACTTTTA
GTAGTTCAAACTCCGACCTTGGTGAAGCTCTATTTGACATTTTACTTCGA
GTTACAATTGTGGAAGAACAGGCTAGATACTGTATGAAAAGCAAGACCAT
ATAGGAGTAAAAAATAGACTTATAATAGTAGAAAAATGATATCGCCATCC
AGGCGCCAATTTTCCATTTTTCAGGACGGCAGAACAGCTTTCTTTTGTAT
GGACGACATAAATTTTAAATGTCTTGTGTAGTGAAGCTATGGCGCCGACT
AAGTAGTTTATATTATGGAGATAACCTACCAACATCCGCAAATCAGAACA
CCGGACACTCGTTGGTGTAATCATCTTGCCACACAGAACAGCCGTGCTGC
TGTTGAATGGCGCTTTGTTTCGTTCTTGTTGGGACACGTCAGATATAGCA
TTTCCACTTGGATGAAAGGCAACCAAACTGTTTGTGATGGAAGTACTCTA
TTACTAGTACTGTTTTCTAGTGTTTCAGTCATGACCATACAGACAAGAAT
GGATGGAAGAAAACAGGCTTCGACTTTTTGGGAATTGCCTGGTTACATCG
CAGTGCTTGTGCACGGAGCATTCGTTAGAGATCAAACGCTTGCCCAGAGG
TGGGGGGGGACAACGATCGTACAAGTCCAGCAGCTGATCGGAGACGCATT
CGTTTGCAAAGAAGGATGTATGGGTACGAGCAATACGAACTTGACGAATT
GAAAGCTCGCAAAAACTTCCCGGTGCTCTATACATGAGGAGCGCTGTTAG
TACGGCTGTGCCAGAGCAATTGAGCCTACTGCAACCCTATTATATTAATA
CTAAAATACTCTAGTACTATACTACCGCAGTACAGTCAAGTATTAGAGCG
CACGCGGTTACAAAGCCCTTGCGAAATTGTCATTTCCCGTGAGTAAAACG
TACGTTAGAAAACTCAGTTTCCTCTCGCTGACGAATTGAACTTTCCACCG
TGCAATTCCAGTTGTCATCGTTGTAGCATTCAGTCTAATTAATTAGAAAA
GCCTGAGGTACTCTACAAGTATCTCCTTGAATTGCCCTTTTTTTCCCCCA
AGAATAAAGCTCTCGTTAATATTCGGCCGCAAGACACATCCCCCGTATCC
CTGTTGTTCGGTGGACTCGACCAAACTTGGAAACTATTAATACGGTATTA
TAATGAGATTTGGCTTTTTTCAGCCCTCAAAGCCTGCGCGCATCGCCTGC
GCGTAGAGGTGGCTATACACCGGGTACCGAGAGTGGCCGGAAGAAACACC
GACATTGTCCTCGTCGCCCGTTTGAATCGATCCGTTCGGTTTTCAAGTAC
AGTGGGAACAGTGTTGAATATTGTGCACTTGAGTACCCGAAGGGCAACAG
ACTTACCTTTGATGCGAAATCCGAAACATCCGGAGGTTACACTTCTTGCA
ACTTTTTATCATGACGCAAGCGCACGTGGGTATAGATGCCCCATATTGTT
ACTACGCGGGACATGGTGTTGAGATTGAAGGCCTCGGTGGTGAATATATT
CGGTAGAGAGCGAGCAGGTGTCAGGAAGATGACATGAAACTCAACTTTTA
CAATAGCCATATTGCCTAATGCCTCAAAGTAAAAGGCATGCTGAACAGAA
TCGGGAACCGCGTTTTTCCTAGTACTTGAGCAGGACTTTATTAATAATTC
AACGGGGGCAAGGGATTGTACCTTGATTTGCCCTTGCGTTACCTCGAGCT
ACGTTCAGACATTTAAGGCACTAGCGGATATACAAAGGTACAGGTGCCAT
TGTTTTACAGGAGATTGCGGTTCACTTTTATGCCTCTGCTTGCCACCAAT
CGTTTTGACTTGTTTTCGTCGGACATCGCTTGCGAATTGCAATTGCCTTG
ACATAGTTTCGCAAGTTTGCACGGTCGGACCTGTGCGGACCTACTTTGCT
TCTCGCTGGTCCGGTATTCTTTCCAGACATGAGTGTTAACACAATGCTTA
TGGACTACCGTTAAGCGTTTGCTATCTAACTCGCGCGAAAGAGTTTCCCT
GAACTAGAGATGTAGTACGTAGTCTAGAAATACAGCTGTTGTGGGATCAT
GGACCGTATTGGTGGTCTCAATTTAAAAGTGCATGCTCGTATGTTGGGAA
AGGAGTCGATTCGAACAGGTTTTTGAGTAGGAAGAATGTGTTTTCTCTCG
TTAACAGCCCTGCAATATATCCTTATATATCCTGCCCTGCCCTATAAAGT
GTTTATTGTTTGTAAAGAACCAGCACAACAAAAACCGTCTCAAATCTTAT
TGTTCATTTTAAGCAAGAACAGCGGTACTACAGTTTTTTGGGTACCCGCT
GCCACTAGGAACCTCTCAGACTCAAAACTGTTTTAATACTGTAGGAAACG
AAGAATGCGCCAGCACGAGGGAAAGTAATATTGGGCAAAAACTTTAGCTG
GTTTATCTTTTATTAAGAAGGGTCTCCTTGCAAGAAGAGGGAAACTATAT
TTTTAGGTTATTTAAGGTTATCGATGAGAGACCAAAAAGACCATACAAGC
CAAGTGTGGGCAGTTGTTCAGCGAAACGGGTAGCGTCGAAACCGAGCACC
GAGCCACAGGGCGAGCCAGCTAGAACCGTCGGGCATGTTTGTCGACATAA
GCCATGGCCACGAACACTGTAGTCACTGTCACTGTCGGGGAGATGAAGAT
GCCAAATATGTTTCCAAACGGTGTTGGTACGGTAGTCGGTCGAGGAAAAA
CAGAACGAGGAAGACAGCCGCCTGTATTCTGCATTGTGGGGGATGATGTA
CCCGAGGTTGACGACAGAAAAGTATAGAGGCCGGTCGGCAGCATTAACAC
CCACATGCCGTGTTTTGTGCCGGCTTCTCTGTTACGGGAAACGTTTGAGT
TGATGTATCAAAGTGGCCATGTGGATTCATCTTGGGGTAACTTTTGAAGC
GTTATGCTTAAAAAATCTAGAGAAACTAGTGTGGTTGCAAAGTTGTATTC
TCCAGTTTTTTTCAAGTATTTGAGAGAAGTAATGTGCGTCATACGTAAGA
TTAATCATAGTGTTCCAGTTCGCAAGATATTTTGAGTGTCTTGGAACATT
GGTGCCGCCTTGAAAATTGTGTCGAGAATAGTATAGGAGTATAATAGTAC
AACAAAACCCGTGTTTGGCTGGAAGATTCCTCCACGTTGAGAGAGGCCAC
CGGGCGCTCACTCATTTTTCCGCAAGCCCCCGCAAAATACATGCCGAAAA
TACACCGAAGCTTCAAATATTCGTAATTGCTAAGCCAACATCCCAACTGT
TTACCTATTCGCGTTCATATCTTATCGCTTGGAGGCTTGCGATCATCAGC
GGTTTCAATTCCGCTCTATTACAGGAAGTAAAAGCTGAACAGTCGCAATA
TACTCATACTGCGGTTTCATGAATTAGAGCATGAAGCTCTGGGAGTACAC
GCACATTTCACGAACATCTGTTATTTTAGCCTTGTCAGTTGCTGTTCGAA
AATATAATGGCGAGACTCGTCGCGAAATGCGCCACTGTTGGTAGATGCGT
CATAGTGATCGCCTCACCACCAATGGACAAATGTTGCAATTTTGGTCCCA
TTTTCAATAAGCTCATCTTGGTTCACGGCTCAAGCATCGTGGTTCAAAAT
CTAGGACCATTTCGCTTTCGCAAAGAAGGAGTTTTCAGAATGCTATACAG
TTCAATTCTCTCGAATGGTAACAAGCGTTGCAGTAGCGTCAAGTCACACG
GTAACATATCCCAAAATTAGTTGGCATGAGCAGATACGCACAAACTTGTA
CCTGGTATATGTGATACGAAGTATGTCGCCGTTACTTTCAACATGCACAC
TTCATACCAATAGCGGGTATGGGAAAGAGAGGCGCATATTAATTGGTCCA
TGGTGACCTGCTAAGGCAGCACTCGTTGATGAAACTACCTTGAAGTTTAC
CGGCCCTGTGCCGACGGACTCTCGGCAGTGAACGCCATCGGTACGCAATT
GCGTGACCCGATAAACTCGGGACTTACCCGATGGCGTATGGCGGTTTCAT
ATAAATATACTGGTATGGACGCCGCCGCGGAACTCGGGAGAAATTCCGTA
CGTAAGCACCAGCTCCCAGATTCAGCCTGAGTATGGGGATGAGCAGGCCA
ACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCTCGGACA
CGAACGCGGACAGGGGAATAATCATTCTCCCTGTTCAGCTGACCACGAGC
AGGATTGGCAACCTTACCAGTTGATCCATGCTCTTGCTATATGTGTGACC
ATACATACTATCGAGAGGTTTGACGGTTGTGCATCCATCACTTGAACCAT
TAGACTGAGTCGCCCCTATAACTCCATTTTGTAAGCATCCATTTTCCGAA
ACGGTTACCATGACCCTACTTTGAAACGCTAAGCTATACAAACAAATGTG
CGGCGAACGCCTGCTTTCCGCCCGCGCGCCTCCGAAATCTCAAGTGTGTG
CCCTCAAGTTCACCGAGACGGCTCGTGCTCGCATCCTTGCTGCCGGTGGG
GAGTGCATCACGTTTGACCAGCTGGCGCTTCGCTGTCCTAAGGGCTCCAA
CACCGTCCTGCTGCGTGGCCCCAAGGACGCACGTGAGGCTGTCAAGCACT
TCGGCCACAGGACCACGTGAGTTGTATACCGTGAATATGTCCATTAGTTT
ATGTTTTCATGATATTTTAGAATTACCTTAACTGTTCGAATGCATCACAA
CACACTCTTTAGATTGATTATGCAGTATTTTTTATGAAACTGATTTTTTT
TCAGAGTCACAAATGTTTGTGTAGGCTGTATGTGCATATCAGAAAAGAAA
ATAGTTCAGGACACTGATGAATGATGTGAAAATGTAACGATATCCGAGAG
TGTTGTCGCCTTCTACTGACGGTTACCCGCAGCCTCTATATTGCTGAGTA
CTGAGGCTTTTTCTGGTTGTTTTGTAACATTCAATTTTTGTTGGAAGAAC
CCTCGCTTAACTATTACATACTGTATACTGTATTGCAAAGAAACGAATAC
TCCTGGGTTGTCGAATCCTAAAAAAGATGCAAGTGTGATGACGAATCCGG
CAACCAAACTGTCTTATTGGGGATCAGTTCAATATTGCAGCATGTTCAAT
ATCGTACAATGGACGCTTTCATTCAATTTGCGGCAGGGTTAACAACTTGC
ACACGCACGATTCTGTCAAGCCATACGTGCGCTCCAAGGGACGCAAGTTC
GAGAAGGCTCGTGGACGTCGCAGGTCCAACGGTTTCAAGGTA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig802:358737..365978-

>mRNA_F-serratus_M_contig802.19430.1 ID=mRNA_F-serratus_M_contig802.19430.1|Name=mRNA_F-serratus_M_contig802.19430.1|organism=Fucus serratus male|type=CDS|length=1152bp|location=Sequence derived from alignment at F-serratus_M_contig802:358737..365978- (Fucus serratus male)
ATGGGTATTGATCTGGTGGCTGGTGGGCGCCGTGTTGGCCATAAAGTCCG
CAAGGCGCCGGCGTCTAAGAATGTTTACCTTGGACTGCTAGTGAAGCTTT
TCAGGTTCCTCGCCAGGCGGACCGATAGCGCCTTTGCGAAGGTGGTCCTT
AGGCGCCTGTACATGTCCAGGACCAACCGTGCCCCGCTCTCTCTCTCTCG
TCTGGCACGGTACATGAGGGATAAGGAGGAGAATACTGCGGTCATCGTGG
GGACCATCACGGATGATGTACGCCTCCTTGAGGTGCCCAAGCTATCTGAT
GGGTATTGATCTGGTGGCTGGTGGGCGCCGTGTTGGCCATAAAGTCCGCA
AGGCGCCGGCGTCTAAGAATGTTTACCTTGGACTGCTAGTGAAGCTTTTC
AGGTTCCTCGCCAGGCGGACCGATAGCGCCTTTGCGAAGGTGGTCCTTAG
GCGCCTGTACATGTCCAGGACCAACCGTGCCCCGCTCTCTCTCTCTCGTC
TGGCACGGTACATGAGGGATAAGGAGGAGAATACTGCGGTCATCGTGGGG
ACCATCACGGATGATGTACGCCTCCTTGAGGTGCCCAAGCTATCTGTGTG
TGCCCTCAAGTTCACCGAGACGGCTCGTGCTCGCATCCTTGCTGCCGGTG
GGGAGTGCATCACGTTTGACCAGCTGGCGCTTCGCTGTCCTAAGGGCTCC
AACACCGTCCTGCTGCGTGGCCCCAAGGACGCACGTGAGGCTGTCAAGCA
CTTCGGCCACAGGACCACTGTGTGCCCTCAAGTTCACCGAGACGGCTCGT
GCTCGCATCCTTGCTGCCGGTGGGGAGTGCATCACGTTTGACCAGCTGGC
GCTTCGCTGTCCTAAGGGCTCCAACACCGTCCTGCTGCGTGGCCCCAAGG
ACGCACGTGAGGCTGTCAAGCACTTCGGCCACAGGACCACGGTTAACAAC
TTGCACACGCACGATTCTGTCAAGCCATACGTGCGCTCCAAGGGACGCAA
GTTCGAGAAGGCTCGTGGACGTCGCAGGTCCAACGGTTTCAAGGTAGGTT
AACAACTTGCACACGCACGATTCTGTCAAGCCATACGTGCGCTCCAAGGG
ACGCAAGTTCGAGAAGGCTCGTGGACGTCGCAGGTCCAACGGTTTCAAGG
TA
back to top