mRNA_F-serratus_M_contig80.19376.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig80.19376.1
Unique NamemRNA_F-serratus_M_contig80.19376.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: D8LQ55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ55_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 8.250e-149
Identity = 223/269 (82.90%), Postives = 242/269 (89.96%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVV---VDDDDVEDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAE 821
            MARNEEKAQMMMNKWTTMKEQMAKPER RRPFL+SECDNLQDAELWRRDIIRET+KSVHLIQNAGAGEHKIRDLNDQINKLLRER HWDKRI ELGGPDYAANAPK Y+ADGRELPGGGGYMYFGAAK LPGVRELFHKSDVENPRRTRKDMYQ +TPDYYGYRDEEDG+LVAKEAV+EKR+++ AVSEW+AEKRR+++DGE+      DD+          XXXXXX SA+VRAHVPVPSQDAIKEAILKRKK +LLKRLD E+D A+
Sbjct:    1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQAEKRRRLEDGEEEAGGDADDEXXXXXXXXXXXXXXXXXSAEVRAHVPVPSQDAIKEAILKRKKLTLLKRLDGEEDAAD 269          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: W7TA77_9STRA (Pre-mrna-splicing factor isy1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA77_9STRA)

HSP 1 Score: 268 bits (686), Expect = 2.090e-86
Identity = 150/270 (55.56%), Postives = 186/270 (68.89%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQV-------------VVDDDDVEDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKR 794
            MARNEEKAQ M+NKW TMK+ +A  ++ RRPFL+S+C  L +AE WRR II+E TK V  +QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY    P+ Y+ADGRELPGGGGY YFGAAK+LPGV+ELF KS  +  RRTR DMY+ + PDYYGYRDEEDGIL+ KE   EK  I  AV +++   R +  +GE+                             XXXXXX SA V+AHVPVP Q+ I  A++++KK++LL +
Sbjct:    1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAVKAHVPVPCQEDIMTALMEKKKRALLSK 270          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A7S2S7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Y0_9STRA)

HSP 1 Score: 268 bits (685), Expect = 5.330e-86
Identity = 150/278 (53.96%), Postives = 190/278 (68.35%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAK---PERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQ----DGEQVVVDD------DDVEDVQ-------GQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKRL 797
            MARNEEKA  ++NKW TMK + AK   P+R  RP+LA+ECD+L+ AE WR D+I+E +K +  IQNAG GEH+IRDLNDQINKLLRE+ HW KRI ELGGPDY A  P+ ++ADGRELPGGGGY YFGAAKELPGVRELF     + PRRTR  +Y+ +TPDYYGYRDE+D  L+ KEA+ EK  IEEA ++ +  KR++      +GE            DD   +        G+A       +S   +AHVPVPSQD +K+AIL  +K+ LL++L
Sbjct:    1 MARNEEKAMSLLNKWVTMKSEFAKGGGPQR--RPYLATECDDLRQAERWRLDVIKEVSKGIGEIQNAGLGEHRIRDLNDQINKLLREKFHWQKRIRELGGPDYNAIEPRSFDADGRELPGGGGYKYFGAAKELPGVRELFQAEAPQRPRRTRAQIYKTITPDYYGYRDEDDEDLLRKEALAEKEAIEEADAQHQRLKRQRXXXXXXNGEXXXXXXXXXXXXDDAAAMAAAAHSNFGEAMARASAASSTVAKAHVPVPSQDEVKQAILDHRKQQLLQQL 276          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: UPI000C03B492 (pre-mRNA-splicing factor ISY1 homolog n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI000C03B492)

HSP 1 Score: 247 bits (630), Expect = 8.810e-78
Identity = 136/272 (50.00%), Postives = 177/272 (65.07%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMA-KPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVVVDDDDVEDVQGQAAXXXXXXTSAQVR----------AHVPVPSQDAIKEAILKRKKKSLLKRLDAE 806
            MARN EKA  M+ +W  ++ + A K  + RRPFLA+ECDNLQ+AE WR+ IIRE  K V  IQNAG GE +IRDLND+INKLLRE++HW+ RI ELGGPDYA   PK+ + +G+E+PG  GY YFGAAK+LPGVRELF +     PR+TR ++Y+ V  DYYGYRDE+DG+LV  E  VEK  I  A+ EWE    RK + GE V   D + E++              +            AHVPVPSQ  ++E +++RKK  LL++  +E
Sbjct:    1 MARNAEKAMTMLARWYDLQRKEAGKGIKERRPFLATECDNLQEAEKWRQQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYAKIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRKTRGELYKDVDADYYGYRDEDDGVLVPLEQEVEKEAIARALDEWE----RKKEAGELVTEQDQEEENIYAVTKEQEESDEDMETDQTEEGNQPFVAHVPVPSQKEVEEMLVQRKKMELLEKYASE 268          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A7RT52_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RT52_NEMVE)

HSP 1 Score: 243 bits (621), Expect = 1.950e-76
Identity = 134/272 (49.26%), Postives = 177/272 (65.07%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKW-TTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVVVDDDDVEDVQ----GQAAXXXXXXTSAQVR------AHVPVPSQDAIKEAILKRKKKSLLKRLDAE 806
            MARN EKA  M+++W    +++  K  + RRPFLA+ECDNLQ+AE WR  IIRE  K V  IQNAG GE +IRDLND+INKLLRE++HW+ RI ELGGPDY    PK+ + +G+E+PG  GY YFGAAKELPGVRELF +     PR+TR ++Y+ +  DYYGYRDE+DG+LV  E   E+  I  A+ EW    +RK ++G QV ++D   ED+     G         T           AHVPVPSQ  ++E +++RKK+ LL +  +E
Sbjct:    1 MARNAEKAMTMLSRWYDVQRKEAGKGIKERRPFLATECDNLQEAEKWRHQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYGKIGPKMLDHEGKEVPGNRGYKYFGAAKELPGVRELFEQEPPAPPRKTRGELYKDIDADYYGYRDEDDGVLVPIEQEAEEEAISRAMDEW----KRKKEEG-QVELEDXXXEDIYAVKPGPEGDDEDMDTEEGAEKEQSFVAHVPVPSQKEVEELLVQRKKRELLDKYASE 267          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: K3X334_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X334_GLOUD)

HSP 1 Score: 238 bits (606), Expect = 3.630e-75
Identity = 116/202 (57.43%), Postives = 156/202 (77.23%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGI-LVAKEAVVEKRRIEEAVSEW---EAEKRRKI 617
            MARNEEKAQ ++N+WT+MK+  +   ++RRP+LAS+CDN++DAE WRR IIRE +K V  IQNAG+GEH IRDLND+INK +RE++HW+KRI ELGGPDY+ + P+ Y+ADG  + GGGGY YFGAAK LPGVRELF K +    +RTR+DM++++ PDYYG+RDEED   L+ +E  VE    + A+ EW   EAE++ ++
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASQCDNIKDAERWRRQIIREISKKVADIQNAGSGEHVIRDLNDEINKRMREKRHWEKRIVELGGPDYSRSQPQAYDADGSSVQGGGGYKYFGAAKNLPGVRELFQKEERAPKKRTRQDMFKNIEPDYYGFRDEEDDPQLLQEELEVEAALQKAAIEEWNRVEAERKSQV 202          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A2C9JS12_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JS12_BIOGL)

HSP 1 Score: 240 bits (613), Expect = 4.450e-75
Identity = 134/287 (46.69%), Postives = 184/287 (64.11%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGE----------------QVVVDDDDVEDVQGQAAXXXXXXTSAQVR---AHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAEDI 827
            MARN EKA   + +W   +    K E+ RRP+LAS+CDNLQ+AE WRR II E ++ V  IQNAG GE K+RDLND+INKLLRE+ HW+ RI EL GPDY    PK+ ++DG+E+PG  GY YFGAAK+LPGVRELF +     PR+TR ++ + +  DYYGYRDE+DGI++  EA VEK+ I+  V EW+ EK+ K+Q GE                + + + DD ED   + +           +   AHVPVPSQ  I++A+L RKK  L++R  +++ + E++
Sbjct:    1 MARNSEKAMTTLARWRASQVGGIK-EKERRPYLASDCDNLQEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIVELNGPDYKKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFDQEPAPAPRKTRAELMKDIDADYYGYRDEDDGIIIPLEAEVEKQVIKTKVQEWK-EKQNKVQTGEMTHEEAHGAEEELFSKEALAEKDDEEDESLKPSTSKDFYREFDKQHFIAHVPVPSQKEIEQALLHRKKMELIQRYASDNLQEEEM 285          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: D0NZZ7_PHYIT (Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZZ7_PHYIT)

HSP 1 Score: 237 bits (605), Expect = 4.980e-75
Identity = 119/207 (57.49%), Postives = 155/207 (74.88%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEA-EKRRKIQDGEQVVV 641
            MARNEEKAQ ++N+WT+MK+  A   ++RRP+LAS+CD L+DAE WRR IIRE +K V  IQNAG+ EH IRDLND+INK +RE++HW++RIA+LGGPDY+ + P+ Y+ADG  +   GGY YFGAAK LPGVRELF K DVE  +RTR+ MY+H+ PDYYG+RD++D   +  E   EKR  + A+  W+A E +RK Q  E V V
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDTLKDAERWRRQIIREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIAQLGGPDYSKSQPQSYDADGTPVSSVGGYKYFGAAKNLPGVRELFQKEDVEPRKRTRQHMYKHIKPDYYGFRDDDDEQQLKDEDEAEKRLRQRAMDGWDAAEAKRKTQVAELVRV 207          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: UPI0003597C0E (pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597C0E)

HSP 1 Score: 239 bits (610), Expect = 1.260e-74
Identity = 137/292 (46.92%), Postives = 184/292 (63.01%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGE-----------------QVVVDDDDVEDVQGQAAXXXXXXTSAQVR--AHVPVPSQDAIKEAILKRKKKSLLKR-----LDAEDDEAEDI 827
            MARN EKA   + +W   +    K E+ RRP+LAS+CDNL +AE WRR II E ++ V  IQNAG GE K+RDLND+INKLLRE+ HW+ RI ELGGPDY    PK+ ++DG+E+PG  GY YFGAAK+LPGVRELF +     PR+TR ++ + +  DYYGYRDE+DGI+V +E   E++ I   V EW+ EK+ K++ GE                 ++  DD +V++V+ +             R  AHVPVPSQ  I+ A+L RKK  LL+R     L  E+ EA+D+
Sbjct:    1 MARNSEKAMTTLARWRASQVGEIK-EKDRRPYLASDCDNLHEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRILELGGPDYRKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPQELEAERKAISSKVREWK-EKQNKVKSGEMTEEEATGKEEELFTAAELAEDDLEVQEVEMEPTESTSDLDLDNQRFIAHVPVPSQKEIEAALLMRKKMELLQRYVSDGLQEEEMEAKDM 290          
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A0B6ZNF1_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZNF1_9EUPU)

HSP 1 Score: 238 bits (607), Expect = 3.470e-74
Identity = 135/286 (47.20%), Postives = 183/286 (63.99%), Query Frame = 3
Query:   24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQV----------------VVDDDDVEDVQGQAAXXXXXXTSAQVR--AHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAEDI 827
            MARN EKA   + +W   +    K E+ RRP+LAS+CDNLQ+A+ WRR II E ++ V  IQNAG GE K+RDLND+INKLLRE+ HW+ RI ELGGPDY    PK+ + DG+E+PG  GY YFGA+K+LPGVRELF +     PR+TR ++ + +  DYYGYRDE+DGI+V  E   EK+ I+  V EW+ EK+ KIQ GE                  + +DD+  D +  +A         + R  AHVPVPSQ  I+EA+L+RKK  L++R  ++  + E++
Sbjct:    1 MARNSEKAMTTLARWRASQVGGIK-EKDRRPYLASDCDNLQEADKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIKELGGPDYRKTGPKMLDGDGKEVPGNKGYKYFGASKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPLELEAEKKAIKFKVREWK-EKQNKIQMGEITQDEAHKPEGELFTPAEINEDDEDSDPEISSAMNAAINDLDKQRFIAHVPVPSQQEIEEALLERKKMELMQRYASDSLQEEEM 284          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ55_ECTSI8.250e-14982.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TA77_9STRA2.090e-8655.56Pre-mrna-splicing factor isy1 n=1 Tax=Nannochlorop... [more]
A0A7S2S7Y0_9STRA5.330e-8653.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI000C03B4928.810e-7850.00pre-mRNA-splicing factor ISY1 homolog n=3 Tax=Astr... [more]
A7RT52_NEMVE1.950e-7649.26Predicted protein n=1 Tax=Nematostella vectensis T... [more]
K3X334_GLOUD3.630e-7557.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2C9JS12_BIOGL4.450e-7546.69Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
D0NZZ7_PHYIT4.980e-7557.49Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthor... [more]
UPI0003597C0E1.260e-7446.92pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Aply... [more]
A0A0B6ZNF1_9EUPU3.470e-7447.20Uncharacterized protein n=1 Tax=Arion vulgaris Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig80contigF-serratus_M_contig80:362369..366767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score425.6
Seed ortholog evalue1.7e-116
Seed eggNOG ortholog2880.D8LQ55
Preferred nameISY1
KEGG koko:K10352,ko:K12870
KEGG Pathwayko03040,ko04530,map03040,map04530
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0070013,GO:0071008,GO:0071012,GO:0071013,GO:0071014,GO:0071020,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.generation of catalytic spliceosome for second transesterification step
EggNOG OGsKOG3068@1,KOG3068@2759
Ec32 ortholog descriptionIsy1-like splicing
Ec32 orthologEc-26_006080.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041,ko04147,ko04812
Exons3
Model size887
Cds size810
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig80.19376.1prot_F-serratus_M_contig80.19376.1Fucus serratus malepolypeptideF-serratus_M_contig80 362423..366744 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932389.92749-UTR-F-serratus_M_contig80:362368..3624221622932389.92749-UTR-F-serratus_M_contig80:362368..362422Fucus serratus maleUTRF-serratus_M_contig80 362369..362422 -
1690964285.0785098-UTR-F-serratus_M_contig80:362368..3624221690964285.0785098-UTR-F-serratus_M_contig80:362368..362422Fucus serratus maleUTRF-serratus_M_contig80 362369..362422 -
1622932390.01878-UTR-F-serratus_M_contig80:366744..3667671622932390.01878-UTR-F-serratus_M_contig80:366744..366767Fucus serratus maleUTRF-serratus_M_contig80 366745..366767 -
1690964285.1419513-UTR-F-serratus_M_contig80:366744..3667671690964285.1419513-UTR-F-serratus_M_contig80:366744..366767Fucus serratus maleUTRF-serratus_M_contig80 366745..366767 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932389.9495025-CDS-F-serratus_M_contig80:362422..3625871622932389.9495025-CDS-F-serratus_M_contig80:362422..362587Fucus serratus maleCDSF-serratus_M_contig80 362423..362587 -
1690964285.1016936-CDS-F-serratus_M_contig80:362422..3625871690964285.1016936-CDS-F-serratus_M_contig80:362422..362587Fucus serratus maleCDSF-serratus_M_contig80 362423..362587 -
1622932389.970479-CDS-F-serratus_M_contig80:363164..3633181622932389.970479-CDS-F-serratus_M_contig80:363164..363318Fucus serratus maleCDSF-serratus_M_contig80 363165..363318 -
1690964285.1132553-CDS-F-serratus_M_contig80:363164..3633181690964285.1132553-CDS-F-serratus_M_contig80:363164..363318Fucus serratus maleCDSF-serratus_M_contig80 363165..363318 -
1622932389.996214-CDS-F-serratus_M_contig80:366253..3667441622932389.996214-CDS-F-serratus_M_contig80:366253..366744Fucus serratus maleCDSF-serratus_M_contig80 366254..366744 -
1690964285.1291218-CDS-F-serratus_M_contig80:366253..3667441690964285.1291218-CDS-F-serratus_M_contig80:366253..366744Fucus serratus maleCDSF-serratus_M_contig80 366254..366744 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig80.19376.1

>prot_F-serratus_M_contig80.19376.1 ID=prot_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=polypeptide|length=270bp
MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDI
IRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDY
AANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRK
DMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQD
GEQVVVDDDDVEDVQGQAAAAASAATSAQVRAHVPVPSQDAIKEAILKRK
KKSLLKRLDAEDDEAEDIG*
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mRNA from alignment at F-serratus_M_contig80:362369..366767-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig80.19376.1 ID=mRNA_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=mRNA|length=4399bp|location=Sequence derived from alignment at F-serratus_M_contig80:362369..366767- (Fucus serratus male)
CCCAGGGACACCCTTCAGCAAACATGGCGCGTAACGAGGAGAAGGCGCAA ATGATGATGAACAAATGGACAACCATGAAAGAGCAAATGGCCAAGCCAGA GAGGTCGAGGCGGCCATTCCTTGCTTCGGAATGCGACAACCTCCAAGACG CGGAGCTCTGGCGTAGGGACATCATCCGCGAGACCACGAAAAGCGTTCAC CTGATCCAGAACGCTGGGGCGGGAGAGCACAAGATTCGTGATTTGAATGA CCAAATCAACAAGCTCTTGCGAGAGCGGAAGCATTGGGACAAACGAATAG CGGAGTTAGGTGGACCAGACTACGCTGCCAATGCCCCCAAATTGTACAAT GCAGACGGTCGGGAGCTACCGGGGGGTGGGGGCTACATGTATTTCGGTGC GGCGAAGGAGCTACCGGGCGTCCGCGAGCTTTTCCATAAGTCCGACGTGG AAAACCCGAGGCGGACGAGGAAAGACATGTATCAACATGTCACTCCAGAT TACTACGGATACCGGTAAGTGAGGTGGTGGTGCTGCTAGCGCCGAGAAAC GACAACTCGAAATCCTTAGTTCGCGATTGTCCTGGACTCTCTCTCCGATT ATTCATTATATAGTCAATGTACTTGTACTACGAGTAACCAATACGCTGAA TGTGTGAGAAATAACAAACAACGACTATCGAACAAGCAAAACCCTTTTTT ACTACCTCTTTTTTTTTGTACAAAAATGTATGCAGTACTTAATACCTGGT AGTAGATAAACTTGAAGCCAGGAGAAGAGTACAGTGCCGGTACTTGTTCA GTGCCAGCTTAATCTTTTCGTCAGTCTTGCTAGTCCACAGTAGGTATAAT AGCGATTGGTCTAAGTATGGCGCAATACAATTGGCTTCACCCGGACATGA TACTTACGCCGGCACTTTCAACATGCCCGGTGGTTCAGTTGGTGACCTCG AAACCCTCTGCCGTTGGGCGTGAGTTCGAATCTCGGCGCAGTCACACGAG CTGGGATTTTTCCTCACATCATGCCCAACAAGTGGAGAACGATTATTTCG TGGGTACACAAAATTCAACTTCACGGTCGATGAGGGAAAGGGGTGGTTGA ATCCTTCTCGCGATAAAAAAATTAAGGCAAGCACCGCAGAAGGAAGGTGG AGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTGCATCCAC AAGTCTGACGTCCACAATGAATGGGATGGCAACACATATACACAAACACA AACACACACACGATTCATATCACTAGGGACAAAGAGGCGCATATTACTGG TTCCATTGTGACCTGCCAAGGCAGCACCCGTTTGGAACTACCATGAGGTT TACTGGCCCTGTGCCGGCGGACTCTTGGCAGTTTTTGTTTGAAGAAAAAC TGAACGCATCTAGACCTTCTGAGTATACTGTACCCCAGTCAGGGGGAAAA TGTCAAAACATTTAGGCGGGATCATAGGCTGCAAATACGAAACCTCTCCA TGGCATTTGAAGGTGTCCCCGATGGTAATAACATTGGGTCAATAGTATAA TGTCGGGGAGAAGCCCACCGTTATGCTGTATACCCGCCGCGGAACTCGCG AGGAATCCCATAAGTAAGCACCAGGTTCAGCCTGAGTATGGAGATAAGCA GGCTGGCGCGGGACGGGACTGCCGAACCTGTCTCGCGAGACCAAATTCTC AGGCGCAAATTCGGACAGGGAAATATTCATTTCTCCTGTTCAGCTGACCA CGAGCAGGATTGGCAACCTTACCCGGTCGATTCATACTCTTGCTATATGC GTGACCATACACTTACATCAATCGCCATGTTGTTCAAACTGAAGAGCCCT CTTGGGGCACCTCGGATAACGGAGCAACCATGGCGCCATGGCAGCTCTGC AACGTACATACGTGATAATATGACTCAGGGCTATCGGCCTGGGGGGGCTT GTAGGTCATGTTGCACGATACCAAGGAAATCGTCTCGGAGCCCAGGACCG TTCCTCGTTGTTTCTCACTATACTATTTGGACCACGGTCATAACCCTTCA AATACCTCCTGTGACCTATATCATAGCCCCCGGACAAAGCCGGTGGAGGT AGGCTGCCCTATCGCCGCGTGTCCATTTGCATAGCACACGGTAAACACTG CAGATAAAGGTCCGAGACTAGTTGATACCTCTCTTGTGGCAATATATTTT CGAGAATTGAGCTTGGTCGGCCCGAGCCAGGTCTCCCGCTATACAGCAGT AGGAACGGCAACAGGTATGGACCGCTCTTGAGCCTGATATTGCCTCCGAG ATCGCGGTTTTGCTCAGCAGACCTCCCCAACCCCTGCTGGAGCAGCACCC TCCGAAGAGGACAACCTTCTACGTGCTACTAAGCCGAAGAAAGTTGTCTA AATGTGTGTAGTCATATTTCTGTGGCATTTGTGTTGTGGTGGAACTCCCG GGCTAACACAAAGCCACCAAAAAGTCGGCCGCCGAACCTCGGTACATGAC CTTCGAAGCCCAAACCATCCTACTGAACAAAGAAACATGACTATGCACTC TCACGTTTGGAAGATGTGGCGGGGGGGACATCAGCGATCTCGCACCTCAT ATTGCCGATACCAAAATTGTACTTTGAGGCATAAACGCCCATATTTACGC CTTTGTTGTACCGATCAACCTATTTTTTTAATTTTGTAGATGTGTCAGAA TGTTTCTGGACCGTTCCTGGCCAATCAGGGGCGGAGCTGCCGATATTTAT ATGCCCTTAATAACTATTTGACGAACCGTCACAGAAAAATTTCATATGAA TGAGGCGTTCTATTCCTATGAAAAAAAGGGGCCCCGTTGAGGATTTGAAC AAAAGGGCGAAAAGGACGACCAGGCAGGTATGTATGTCTTCAACATAGTC CAGAAAAGACCAAACACCGGTCGGTGTTCACCTGAACGTCGGCGTGTTTG GCGTGTGTTGATGGTTCTGCTTCACGGGTTTCCCAGAAAAAATCGTAACC GTAAACCTTGCCCAAGATGGGGTGATCCTTGTTTACAGTAACGAAGCAGG ATGAGCAACGTCGTTACAGTACTGTCTGTATAATGGTTAGGGTAGGTAAC CTGGCTCGACGAGAGGCCCCCGTCAGCAGAAACGAACGAAAAATGATCTT GTACCAAGTATAGTTGGTCAGTTCCAGTAGGTGTGATTGACCCACTCAAA CCTCTGCCCGACGCCACTTGCGATAACATCTTGACTGCTGTCAGATCGCC CACCACTTCGCTGTTTAGTGGAAGGCGCGTTGTATTTTTTGCAATACGCT GCCCGTTTGAGGCGGGTTTCCCGTCTGGTGGATAATCTAATTCGCTTGCC AGCTCAGTTCCGCATGAAGCGCCCCGAACCTGTCGAGTACTGTACAACGG TAATAGAGCTGTGAGATGACATATTTTGGCTCTTGAAACGTCTCGTCAGG GATGAGGAGGACGGAATTCTAGTGGCAAAGGAGGCCGTCGTGGAAAAGCG AAGGATCGAAGAGGCCGTGTCCGAGTGGGAGGCGGAGAAGCGTCGGAAGA TCCAAGACGGGGAGCAAGTCGTCGTAGACGATGATGATGTCGAGGACGTA CAGGTGAGATATGATAGCTGGATATTTATACGAAATGGTTCCGCAACGGT CTTGCGAGCAATGCATTCGTATTTTGGTATCGGGTGAACAAAAGGACAGG TGTCAAAAAGTCATGTTCACATCTAAAGATACTCGTGTGCTAACGTCAAA CATTGTTATCGGGTTGTCGAGGAGAGATGGTGCGTGTTTTTATCCTGAAG GGCCTTGTTCGCATTTCTTTTTAGCCAAGAGGTCGGACCGTCCCATGGCC AAATGTGCAATTTTGGCGGTGATGCTTTCACTTTTACACGCCGTCAGTCC GTTCTCTTGTGTGCTATTAATAGTACTATACTATTAATAGCACCAAGACT GGCCAGACTTTTGCACCAACGGCAAAACGATCCTTTGGCCGAACCCCATC GAGGTCTTTTCCACAAGAACTGAAGGATGTGTCGGAAGCGTATCGCATGC CAAACCAAAAACCAAAAATCTTGTAGACTGCCGTTGGACAACCGCTTTAT GCAGTCGGTAGGTTCCGGTATCTCGTGTGACCGCGACTCTCTCACCGCTT TCTTTCGCTACCGCGCTGCCTTCTCTCAAGGGACAAGCGGCCGCAGCGGC ATCCGCGGCGACCTCGGCACAAGTGCGCGCGCACGTCCCTGTTCCATCGC AGGATGCTATCAAGGAGGCCATCCTTAAAAGAAAAAAAAAGTCGCTGCTG AAACGCCTCGATGCAGAAGACGACGAGGCCGAAGATATTGGATGAGGCGT TCACCTACCTTTGTCCTGAAAACTCTGTAACGGAAGCTTTGTGCGGATG
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Coding sequence (CDS) from alignment at F-serratus_M_contig80:362369..366767-

>mRNA_F-serratus_M_contig80.19376.1 ID=mRNA_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig80:362369..366767- (Fucus serratus male)
ATGGCGCGTAACGAGGAGAAGGCGCAAATGATGATGAACAAATGGACAAC
CATGAAAGAGCAAATGGCCAAGCCAGAGAGGTCGAGGCGGCCATTCCTTG
CTTCGGAATGCGACAACCTCCAAGACGCGGAGCTCTGGCGTAGGGACATC
ATCCGCGAGACCACGAAAAGCGTTCACCTGATCCAGAACGCTGGGGCGGG
AGAGCACAAGATTCGTGATTTGAATGACCAAATCAACAAGCTCTTGCGAG
AGCGGAAGCATTGGGACAAACGAATAGCGGAGTTAGGTGGACCAGACTAC
GCTGCCAATGCCCCCAAATTGTACAATGCAGACGGTCGGGAGCTACCGGG
GGGTGGGGGCTACATGTATTTCGGTGCGGCGAAGGAGCTACCGGGCGTCC
GCGAGCTTTTCCATAAGTCCGACGTGGAAAACCCGAGGCGGACGAGGAAA
GACATGTATCAACATGTCACTCCAGATTACTACGGATACCGATGGCGCGT
AACGAGGAGAAGGCGCAAATGATGATGAACAAATGGACAACCATGAAAGA
GCAAATGGCCAAGCCAGAGAGGTCGAGGCGGCCATTCCTTGCTTCGGAAT
GCGACAACCTCCAAGACGCGGAGCTCTGGCGTAGGGACATCATCCGCGAG
ACCACGAAAAGCGTTCACCTGATCCAGAACGCTGGGGCGGGAGAGCACAA
GATTCGTGATTTGAATGACCAAATCAACAAGCTCTTGCGAGAGCGGAAGC
ATTGGGACAAACGAATAGCGGAGTTAGGTGGACCAGACTACGCTGCCAAT
GCCCCCAAATTGTACAATGCAGACGGTCGGGAGCTACCGGGGGGTGGGGG
CTACATGTATTTCGGTGCGGCGAAGGAGCTACCGGGCGTCCGCGAGCTTT
TCCATAAGTCCGACGTGGAAAACCCGAGGCGGACGAGGAAAGACATGTAT
CAACATGTCACTCCAGATTACTACGGATACCGGGATGAGGAGGACGGAAT
TCTAGTGGCAAAGGAGGCCGTCGTGGAAAAGCGAAGGATCGAAGAGGCCG
TGTCCGAGTGGGAGGCGGAGAAGCGTCGGAAGATCCAAGACGGGGAGCAA
GTCGTCGTAGACGATGATGATGTCGAGGACGTACAGGGATGAGGAGGACG
GAATTCTAGTGGCAAAGGAGGCCGTCGTGGAAAAGCGAAGGATCGAAGAG
GCCGTGTCCGAGTGGGAGGCGGAGAAGCGTCGGAAGATCCAAGACGGGGA
GCAAGTCGTCGTAGACGATGATGATGTCGAGGACGTACAGGGACAAGCGG
CCGCAGCGGCATCCGCGGCGACCTCGGCACAAGTGCGCGCGCACGTCCCT
GTTCCATCGCAGGATGCTATCAAGGAGGCCATCCTTAAAAGAAAAAAAAA
GTCGCTGCTGAAACGCCTCGATGCAGAAGACGACGAGGCCGAAGATATTG
GATGAGGACAAGCGGCCGCAGCGGCATCCGCGGCGACCTCGGCACAAGTG
CGCGCGCACGTCCCTGTTCCATCGCAGGATGCTATCAAGGAGGCCATCCT
TAAAAGAAAAAAAAAGTCGCTGCTGAAACGCCTCGATGCAGAAGACGACG
AGGCCGAAGATATTGGATGA
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