mRNA_F-serratus_M_contig8.19329.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI) HSP 1 Score: 653 bits (1684), Expect = 6.900e-212 Identity = 440/835 (52.69%), Postives = 572/835 (68.50%), Query Frame = 2
Query: 2 SILADEDVITSLARRQAVQKDVQEALASLASTLSAASKPD-VIPTVMHRFHERVEARAGVAKATEEARVEKEKRTLMDKACSERESVLCEEVRSLKNALNAAEEIRQSIQREAEVGSNGAQAEITRERERARAAENDGEEWHREAEAGALRLESMKAEVGAFHEAMAGLHGEMGAVQRELDVAKTSQDKLTKDLAQAEGRAHKKQEALSAMLIRVKDAEKRIRKESNDKSRLSEELAKV---SRQNEKEISALTAEVDRLKKSGDANRVSCDKLNATNRDLNALLQRLSAELEQLQEAAKADAKRVKVAEGQVHEQEERMHRLGEILTATESRLADAGRETNLVKNALSKVTIERQNNVAEIERQRGDLELLEREKRDLVLDVQERLKTLKVTSTELLRYKKFLTEAERTSEKHISAKMASDDRAKKALDELNEARRSTVVKDKRIEALRLELSTLQRTLEQTSDTAKSRERESAQRLVQLSQANAKLSSEGANVTARLAEVEDCAESTVHKLEDAKKALAKSEEEVRXXXXXXXXXXXXLEVADTRWKAAQGQLAAAERRERRITDEAREHLRDALEAKNKALDTAVREAEANNQRRSMEADASQRAATRDHDRTLVALREEAKKKLAEEAAKRVREVSEARRKTRALFGAFQALQGELRNSEAKGISLERKMSQLSTRVNRSGSSSVASSERSLRGESETRGGEIGE-------------------IGGRSTDVVEAEMASLRRQLNAANQAREASEKGAAEARSRAEDEAKERSTLEESLCCKEGEMLVALERLEALKQHFHETKENSQDAQEDLEGLVRQRESEIEQLTRR 2437
S+L DEDV+T L + QAV+ DV+EALA LAS LS+ S D +I TV HRF ER EARA + + TEEAR EKE+R ++KA ++RES L EV L+ A+ AE QRE E + A EI+R RE++ +AE D W + A AG LRLESM AEV A HEAMAGLHGEMGAVQRELD KTSQDKL DL++AEGR K QEA + + + KDAEKR+RKE+ ++ R+S EL K+ S++ E + LTAE+ RLK+S +R DKLNATNR+LNALLQ LS +LE+ + A ++ KR + +V +E + R+ E L ATE+RLA +GR+ L+K ALSK + E AE +RQRG+L+LLEREK DLVLDVQER++ K + + RY++ L +AE ++ SA +A++ KK LDEL EARR TV++D+RIEALR EL+TL+RTLEQT++ AK+R+RESAQRLVQLSQANAKLSSE + AR+ + E+ E ++A KA AK E++ R LE+A+ RWKAAQGQL AA RRE+ +EAR +R+ALE+K+K TA+RE E + RR MEA+AS RA R+HDR LVA+REEAKKKL EE A+RVREVS+AR+K++A+ A Q LQGEL SEAKG LER++SQLS R++R+GSSSVA + GG G+ G R ++V EAEM SLRRQ+ AA +A+E +++ A EAR RA++E K+RS+LEESLC KE +ML ALERL LK E +E++++ +EDL LVRQRESEIE LTRR
Sbjct: 18 SLLPDEDVVTKLQQGQAVKADVREALARLASALSSVSDNDTIIRTVKHRFDERKEARADLWRVTEEARAEKERRDCLNKAQADRESALQNEVERLERAVKIAENSCTDTQREGERAAASADKEISRLREKSSSAEKDAATWQQRANAGELRLESMTAEVSALHEAMAGLHGEMGAVQRELDGTKTSQDKLAADLSRAEGRYRKSQEACLSTIAKAKDAEKRLRKETEERERVSAELEKLVQMSKEEETKNVTLTAEIKRLKESEGVHRSGSDKLNATNRELNALLQSLSTDLEEAKAAGESSGKRAEALAHEVGVKEGDVQRVREALAATEARLAASGRDKELLKEALSKSSAEAHAKTAEFDRQRGELDLLEREKHDLVLDVQERVRVHKEATADAERYRERLEQAENRLKEGESATLAAELSRKKTLDELGEARRGTVMQDERIEALRSELTTLRRTLEQTTEAAKARDRESAQRLVQLSQANAKLSSESTSARARVIDAEEAVEKAGQDAQEAAKAQAKLEDDGRRAADSVQRLEEELEIANARWKAAQGQLVAANRREKEFAEEARRRMREALESKDKEKVTALREMETHADRRFMEAEASHRAVERNHDRALVAIREEAKKKLLEEEARRVREVSDARKKSKAVVEALQTLQGELTQSEAKGSGLERQVSQLSARMSRAGSSSVAPA-----------GGNGGDGSSAXXXXXXXXXXXXXXSSGARGSEVTEAEMTSLRRQMKAATEAKETAQRSALEARLRADEETKKRSSLEESLCRKESDMLAALERLNQLKIRQKEVEEHAREGEEDLRSLVRQRESEIESLTRR 841
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A7S1SCF1_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SCF1_ALECA) HSP 1 Score: 76.3 bits (186), Expect = 7.650e-12 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = -3
Query: 4371 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVGGYVMVVPDALRMFFVFAKRRQKS 4622
EGDE AVL G+ AEDWP+++QV +EVHD+DGRL V+++L A + E Q G Y+ VP LR+F V A RRQ++
Sbjct: 100 EGDEEAVLRGITAEDWPRVQQVAVEVHDLDGRLQRVLEVLRG--AGLSRLSVERQCPTSNGSYLSFVPRCLRLFHVRAARRQQA 181
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A813K416_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K416_POLGL) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-9 Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = -3
Query: 4347 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVGGYVMVVPDALRMFFVFAKRRQKSDTAGAATT 4622
EGDE AV G++ EDWP+I+QVV EVHDVDGRL VV LL S ++ +V + Q GY+ VP +LR+F V A R G TT
Sbjct: 121 EGDEEAVFQGLNEEDWPRIQQVVAEVHDVDGRLGRVVRLLISHGLSWMEV--KQQEPSVHDGYLSFVPRSLRLFHVRAARAGAPSLDGVETT 210
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A813EZJ2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EZJ2_POLGL) HSP 1 Score: 71.6 bits (174), Expect = 1.310e-8 Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = -3
Query: 4383 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVGGYVMVVPDALRMFFVFAKR 4622
EGDE AV G+ EDWP+I+QVV EVHDVDGRL VV LL S ++ +V + Q GY+ VP +LR+F V A R
Sbjct: 871 EGDEEAVFQGLHEEDWPRIQQVVAEVHDVDGRLGRVVRLLISHGLSWMEV--KQQEPSVHDGYLSFVPRSLRLFHVRAAR 948
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A7S4RML8_9DINO (Hypothetical protein (Fragment) n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RML8_9DINO) HSP 1 Score: 69.7 bits (169), Expect = 1.560e-8 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = -3
Query: 4377 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVGGYVMVVPDALRMFFVFAKRRQ 4622
EGDE AVL G+ A DWP+++QV +EVHDV+GRL V+++L A + E QR G Y+ VP +LR+F V A R Q
Sbjct: 244 EGDEEAVLLGIAASDWPRVQQVAMEVHDVNGRLDRVLEVLRR--AGLRRLHVERQRPSTDGSYLSFVPRSLRLFHVRAARGQ 323
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A7S0VV62_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VV62_9CRYP) HSP 1 Score: 60.8 bits (146), Expect = 2.690e-7 Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = -3
Query: 4383 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVGGYVMVVPDALRMFFVFAKR 4622
EGDEL VL G++ EDW +QVVLEVHDV+ RLA V LL V E Q++ G +++VP LR+F+V A R
Sbjct: 35 EGDELLVLLGIEDEDWHIFQQVVLEVHDVEHRLARVRALLERRGFK---VTVEQQKSEWDDGALLLVPLELRLFYVHAVR 111
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: R1E205_EMIHU (Methyltransf_21 domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E205_EMIHU) HSP 1 Score: 55.5 bits (132), Expect = 5.820e-6 Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = -3
Query: 4503 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLL 4622
EGDELAVL G+ A W IRQVV EVHD++GRL VV LL
Sbjct: 18 EGDELAVLRGISARHWAAIRQVVAEVHDINGRLDRVVALL 57
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A368DI49_9FLAO (FkbM family methyltransferase (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A368DI49_9FLAO) HSP 1 Score: 56.2 bits (134), Expect = 7.390e-6 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = -3
Query: 4503 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLL 4622
EG E AVL G++ EDW KI+ +V+EVHD+DGRL SV++LL
Sbjct: 30 EGAEWAVLQGINDEDWMKIKSLVIEVHDIDGRLESVMELL 69
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: UPI0013ECCB76 (FkbM family methyltransferase n=1 Tax=Paludisphaera soli TaxID=2712865 RepID=UPI0013ECCB76) HSP 1 Score: 60.1 bits (144), Expect = 1.050e-5 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = -3
Query: 4440 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLLASTPAAFDDVCWELQRTREVG 4622
E E VL G+D DWP+IRQVVLEVHD+DGRL +V+L A F+ V + + +RE G
Sbjct: 201 ENSEWEVLAGIDEADWPRIRQVVLEVHDIDGRLGRIVELFARH--GFEVVADQEEWSREFG 259
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Match: A0A2N1T8H9_9SPIR (Methyltransferase n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-1 TaxID=2013832 RepID=A0A2N1T8H9_9SPIR) HSP 1 Score: 60.5 bits (145), Expect = 1.070e-5 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = -3
Query: 4503 EGDELAVLHGVDAEDWPKIRQVVLEVHDVDGRLASVVDLL 4622
EG EL +L G+ DWPKIRQ+V+EVHD+DGRLA+V DLL
Sbjct: 253 EGAELDILRGIADGDWPKIRQIVMEVHDIDGRLAAVSDLL 292 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19329.1 >prot_F-serratus_M_contig8.19329.1 ID=prot_F-serratus_M_contig8.19329.1|Name=mRNA_F-serratus_M_contig8.19329.1|organism=Fucus serratus male|type=polypeptide|length=1271bp MHRFHERVEARAGVAKATEEARVEKEKRTLMDKACSERESVLCEEVRSLKback to top mRNA from alignment at F-serratus_M_contig8:882080..895745+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19329.1 ID=mRNA_F-serratus_M_contig8.19329.1|Name=mRNA_F-serratus_M_contig8.19329.1|organism=Fucus serratus male|type=mRNA|length=13666bp|location=Sequence derived from alignment at F-serratus_M_contig8:882080..895745+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:882080..895745+ >mRNA_F-serratus_M_contig8.19329.1 ID=mRNA_F-serratus_M_contig8.19329.1|Name=mRNA_F-serratus_M_contig8.19329.1|organism=Fucus serratus male|type=CDS|length=7626bp|location=Sequence derived from alignment at F-serratus_M_contig8:882080..895745+ (Fucus serratus male)back to top |