mRNA_F-serratus_M_contig796.19248.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig796.19248.1
Unique NamemRNA_F-serratus_M_contig796.19248.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 9.540e-162
Identity = 256/381 (67.19%), Postives = 307/381 (80.58%), Query Frame = 1
Query:    1 LDPVWGGESQKGESFLLTIPHPREASLGGGGLAIEVFHDDFGDAGNFLGQVVVSGNDFLRLHSPGTFKGSEAQSVEAELQKKPEIPLSDQWLVRGMLFYTLEGVDEGEENPTDVVTEDGDASSVGE-------RARPIPRQRSQYRNLEIRIIEARGLGSSDRFGVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAHGDMPDEPQDRERVG-EVLLTVLSAKGLAKVDYFVESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSLGEQGDFL 1119
            LDPVWG +S++GESFLLTIPHPREAS GGGG+ +EVF +DFGD  +FLGQV+VSGND LR HSPGTFKG+EAQ  + ELQKKPE+PLSDQWLV+G LFY LEGVD+G+E+ TD V  D  +   G        R   +P   SQYR LEIR++EA GL  +DRFG+SDPYVV+RAN + QLG TR++  SL+P WT+PEERFVVAVG E AA+ DLTLEVWD+D+LG+G+FLGQVSLPK +LLE  LPTGP+EC+LEK   EDD FN+LVQGVLTFSIREA+G+MPDEP + E  G +V+LT+LSAKGLAK D F +SDPF +VLLNRREIGRTRT+FKTL+P WS PRETFS+RV  NR   +V+VQLWD  LG++GDFL
Sbjct: 1876 LDPVWGTKSKEGESFLLTIPHPREASFGGGGVVLEVFDEDFGDPSDFLGQVIVSGNDLLRFHSPGTFKGTEAQHRQVELQKKPEVPLSDQWLVQGDLFYKLEGVDKGDEDVTDTVVIDHASIVDGPTDLEETTRGYAVPLLSSQYRRLEIRVMEAGGLAKADRFGLSDPYVVIRANGQTQLGHTRTIALSLDPVWTNPEERFVVAVGFEDAAKCDLTLEVWDEDDLGQGNFLGQVSLPKAQLLEFILPTGPIECELEKKQTEDDGFNELVQGVLTFSIREAYGNMPDEPPEGEGSGGQVMLTILSAKGLAKADVFGKSDPFGMVLLNRREIGRTRTLFKTLDPCWSDPRETFSLRVAGNR--CNVIVQLWDEDLGKRGDFL 2254          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A6H5KE16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE16_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 7.920e-139
Identity = 245/497 (49.30%), Postives = 294/497 (59.15%), Query Frame = 1
Query:    1 LDPVWGGESQKGESFLLTIPHPREASLGGGGLAIEVFHDDFGDAGNFLGQVVVSGNDFLRLHSPGTFKGSEAQSVEAELQKKPEIPLSDQWLVRGMLFYTLEGVDEGEENPTDVVTEDGD-----------------------------------ASSVG-----------ERARP---------IPRQR----------------------------------------------------SQYRNLEIRIIEARGLGSSDRFGVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAHGDMPDEPQDRERVGE-----------------VLLTVLSAKGLAKVDYFVESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSLGEQGDFL 1119
            LDPVWG +S++GESFLLTIPHPREAS GGGG+ +EVF +DFGD  +FLGQV++SGND LR HSPGTFKG+EAQ  + ELQKKPE+PLSDQWLV+G LFY LEGVD+G+E+ TD V  D                                     ASS+G           +R  P         +P Q                                                     SQYR LEIR++EA GL  +DRFG+SDPYVV+RAN + QLGRTR++  SL+P WT+PEERFVVAVG E AA+ DLTLEVWD+D+LG+GDFLGQ                      EK   EDD FN+LVQGVLTFSIREA+G+MPDEP + E  G                  V+LT+LSAKGLAK D F +SDPF +VLLNRREIGRTRT+FKTL+P WS+P ETFS+RV  NR   +V+VQLWD  LG++GDFL
Sbjct:  187 LDPVWGTKSKEGESFLLTIPHPREASFGGGGIVLEVFDEDFGDPSDFLGQVIISGNDLLRFHSPGTFKGAEAQHRQVELQKKPEVPLSDQWLVQGDLFYKLEGVDKGDEDVTDTVVIDHASIVDGPTDLEGTTGGHAVPLLVSANKEIKLFRGRFASSMGSVGPHQVGIQHDRMPPWRANSQHTFLPEQNDPPYTRQHTPTFLRSKEIAPALYVYSTRNCLSLSDSRWFTCDLPPTNGVGQSSQYRRLEIRVMEAGGLAKADRFGLSDPYVVIRANGQTQLGRTRTIALSLDPVWTNPEERFVVAVGLEDAAKCDLTLEVWDEDDLGQGDFLGQ----------------------EKKQTEDDGFNELVQGVLTFSIREAYGNMPDEPPEGEGSGGQALLMSETSPAEKTMSVVMLTILSAKGLAKADVFGKSDPFGMVLLNRREIGRTRTLFKTLDPCWSEPLETFSLRVAGNR--CNVIVQLWDEDLGKRGDFL 659          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A812SJQ6_SYMMI (Rasa4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SJQ6_SYMMI)

HSP 1 Score: 105 bits (261), Expect = 7.380e-21
Identity = 103/354 (29.10%), Postives = 159/354 (44.92%), Query Frame = 1
Query:   94 LAIEVFHDDFGDAGN--FLGQVVVSGNDFLRLHSPGTFKGSEAQSVEAELQKKPEIPLSDQWLVRGMLFYTLEGVDEGEENPTDVVTEDGDASSVGERARPIPRQRSQY--RNLEIRIIEARGLGSSDRFGVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAV-GREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVL-TFSIREAHGDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFVESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRV-----TDNRHRSSVV-VQLWDNSLGEQGDFL 1119
            L++EV+  D+  +GN  FLG V + G +   L S    K  + QS      KK  +  + Q LV+G + + L                            P+P ++  +  R++E+ I  AR L  +DRFG++DPY VVR N K   G+T  V +SL P W +  E F +   G +      L +E+WD    GKG+FLG   L  ++L +L      V   L+ +     Y +K VQ +  T  ++   G           +    L V+ A+ +A   +F + D F VV  N +E+G T  + K  NP WS  R   S+       T+    S+VV +++W      +GDFL
Sbjct:  462 LSVEVW--DWNASGNSVFLGCVELKGPE---LASFMDVKDMKRQSFTLTTTKK--MSKNSQKLVKGSIVFLLS---------------------------PMPSEKEAFMGRDIELEISAARSLQKADRFGLADPYCVVRWNHKV-AGKTNVVKNSLNPLWRN--EIFQIRTRGTDSLKMCLLYIEIWDQTMNGKGNFLGCFELTGQDLEQLVENNDLVWHTLKPSP----YLSKAVQSLKPTGELQFRLGLSGTTGGAASNIASFELAVMCAENIAPTSFFGDVDSFCVVKSNGKEMGTTAVITKNNNPRWSGERFVVSMHTHVDPDTEETSSSTVVSIEMWSMLALGRGDFL 774          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: UPI001CE1D8E8 (multiple C2 and transmembrane domain-containing protein 1 isoform X1 n=7 Tax=Siniperca chuatsi TaxID=119488 RepID=UPI001CE1D8E8)

HSP 1 Score: 93.6 bits (231), Expect = 5.170e-17
Identity = 84/258 (32.56%), Postives = 122/258 (47.29%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRFGVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQV-----SLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAHGDMP----DEPQDRER----------------VGEVLLTVLSAKGLAKVDYFVESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSLGEQGDFL 1119
            + I +IE R L   D  G+SDPYV  R   +K   R+++VP +L P W    E+F + +  E     D+T  VWD D   + DF+G+      +L KE+   L+LP       LE++     Y   LV   LT S   +  D+     D+PQ+R +                VG V + V+ A+GL   D   +SDPF V+ LN   + +T T++K LNP WSK    F+  V D    S + V ++D       DFL
Sbjct:  381 VSIALIEGRNLIPMDPNGLSDPYVKFRLGHQKY--RSKTVPKTLSPQW---REQFDLHLYEETGGVLDIT--VWDRDTGRRDDFIGRCQLNLSTLAKEQTHHLELP-------LEESRG---YVVLLV--TLTASAHVSIADLSVTPLDDPQERRQILKRYGVLKSFSNFRDVGIVQVKVMRAEGLMAADVTGKSDPFCVLELNNDRL-QTHTVYKNLNPDWSK---VFTFNVKDIH--SVLEVTVFDEDRDRSADFL 613          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A2T2NI50_CORCC (Tricalbin n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2NI50_CORCC)

HSP 1 Score: 82.8 bits (203), Expect = 2.150e-13
Identity = 66/225 (29.33%), Postives = 104/225 (46.22%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLV----QGVLTFSIR-------EAHGDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFVES-DPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNR 1056
            L+I    A+GL + D+F G  DPY VV  N + +LGRT++V  +  P W +     V ++   K A   LT+ ++D ++  K   LG  +   E+L E             +N  E+ +   +     +G+L   +R       E   D   EP    R G    T+  AK L      + S  P+A++LLN RE+  +R M +T NP+W  P  T  + +TD +
Sbjct:  457 LQITFHGAQGLKNPDKFSGTPDPYAVVSINNRNELGRTKTVHENANPRWNETMNIIVTSL---KDA---LTINIFDFNDFRKDKELGTATFALEKLEE-------------ENEHENLHMEVMSGGRPRGILQADVRFFPVLEGETLEDGTVEPPPESRTGIAKFTIEQAKDLDGTKSLIGSLSPYAILLLNGREVHTSRAMKRTNNPIW--PDATKEMLITDRK 660          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A2T3BEY7_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3BEY7_AMORE)

HSP 1 Score: 81.6 bits (200), Expect = 5.120e-13
Identity = 67/232 (28.88%), Postives = 101/232 (43.53%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLEL-DLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAH--GDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFV-ESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSLG 1101
            L + I  A+GL + D+F G  DPY VV  N   +L +T+ +  +  P W   E +FV+           LTL+++D +   K   LG  S P E + E+ D     +E               +V  +  F + E     D   EP      G    TV  AK L      + + +P+AV+LLN +EI  TR + +T NP+W    +   V +TD +     +V   D  LG
Sbjct:  453 LAVTIHGAQGLKNPDKFSGTPDPYAVVSFNNGAELAQTKVIKENANPKWN--ETKFVIVTSFNDT----LTLQIFDYNEYRKDKELGTASFPLERVEEITDYENEQLEI-----VSNGKPRGAVVADIRFFPVLEGRELADGKKEPPPESNTGIARFTVEQAKDLDGTKSLIGQLNPYAVLLLNNKEIHTTRKLKRTNNPIWDNGSK--EVLITDRKSAKLGLVIKDDRDLG 671          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A6A6JZY1_9PLEO (Tricalbin n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JZY1_9PLEO)

HSP 1 Score: 81.6 bits (200), Expect = 5.130e-13
Identity = 69/241 (28.63%), Postives = 110/241 (45.64%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEEL--------LELDL-----PTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAHGDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFV-ESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSL 1098
            L+I    A+GL + D+F G  DPY VV  N +  L RT++   +  P W +     V ++   K A   LT+ ++D +++ K   LG  +   E+L        L L++     P G ++ D+         F  +++G +   ++        EP    R G    TV  AK L      V +  P+AV+LLN RE+ ++R M +T NP+W  P  T  + +TD +     VV   D  L
Sbjct:  456 LQITFHGAQGLKNPDKFSGTPDPYAVVSINNRAPLARTKTAHENANPRWNETVNVIVTSL---KDA---LTIGIFDYNDIRKDKELGTATFALEQLEEDQEHENLHLEVLSGGRPRGILQADVR--------FFPVLEGAVVDGVQ--------EPPPESRTGIAKFTVEQAKDLDGTKSLVGQLSPYAVLLLNGREVQKSRIMKRTNNPIW--PDATKELLITDRKKAKLGVVLKDDRDL 672          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A8E2ENW5_9PEZI (Tricalbin n=1 Tax=Glonium stellatum TaxID=574774 RepID=A0A8E2ENW5_9PEZI)

HSP 1 Score: 81.3 bits (199), Expect = 6.810e-13
Identity = 63/221 (28.51%), Postives = 108/221 (48.87%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIR---EAHG----DMPDEPQDRERVGEVLLTVLSAKGLAKVDYFV-ESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNR 1056
            L++    A+GL + D+F G  DPY VV  N +++LGRT++V  +  P W +     + ++      +  LT++++D + + K   LG  + P E+L E      P      +N + +   N   +G++   IR      G    D  +EP      G V  TV  AK L      + + +P+AV+LLN +EI  ++ + +T NPVW  P  +  + +TD +
Sbjct:  453 LQVTFHGAQGLKNPDKFSGTPDPYAVVSINSRQELGRTKTVHENANPRWNETVNVIITSL------KDSLTIQLYDYNEIRKDKELGTATFPLEQLEE-----NPEH----ENQNIEVMANGRARGIVQADIRFFPVLKGIKLEDGTEEPPPESMTGIVKFTVEQAKELDGSKSLIGQLNPYAVLLLNGKEIHISKKLKRTNNPVW--PDASKEILITDRK 656          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A6A6T4S6_9PLEO (Tricalbin n=1 Tax=Lophiostoma macrostomum CBS 122681 TaxID=1314788 RepID=A0A6A6T4S6_9PLEO)

HSP 1 Score: 80.9 bits (198), Expect = 9.130e-13
Identity = 63/241 (26.14%), Postives = 110/241 (45.64%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEEL--------LELDL-----PTGPVECDLEKNADEDDYFNKLVQGVLTFSIREAHGDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFV-ESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSL 1098
            L++    A+GL + D+F G  DPY VV  N + +LGRT++V  +  P W +     + ++      +  LT+ ++D +   K   LG  +   E+L        L L++     P G ++ D+         F  +++G +   ++        EP    R G    TV  AK L      + +  P++V+LLN RE+ +++ M +T NP+W  P  +  + +TD +     VV   D  L
Sbjct:  453 LQVTFHGAQGLKNPDKFSGTPDPYAVVSINNRGELGRTKTVHENANPRWNETVNIIITSL------KDSLTINLYDYNEYRKDKGLGTATFALEQLEADDEHENLHLEVMSGGRPRGVLQADVR--------FFPVLEGAVVDGVQ--------EPPPESRTGIAKFTVEQAKDLDGTKSLIGQLSPYSVLLLNGREVTKSKIMKRTNNPIW--PDASKELLITDRKKAKLGVVIKDDRDL 669          
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Match: A0A6A6IBE4_9PLEO (Tricalbin n=1 Tax=Trematosphaeria pertusa TaxID=390896 RepID=A0A6A6IBE4_9PLEO)

HSP 1 Score: 80.5 bits (197), Expect = 1.220e-12
Identity = 70/235 (29.79%), Postives = 107/235 (45.53%), Query Frame = 1
Query:  421 LEIRIIEARGLGSSDRF-GVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVGREKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLEKNADEDDYFNKLVQGVLTFSIR-------EAHGDMPDEPQDRERVGEVLLTVLSAKGLAKVDYFVES-DPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTDNRHRSSVVVQLWDNSL 1098
            L+I    A+GL + D+F G  DPY VV  N + +L RT++V  +  P W++     + ++   K A   LT+ ++D +   K   LG  +   E+L E D        D  +N   +       +GVL   +R       E   D   EP    R G    TV  AK L      + +  P+AV+LLN+RE+ ++R M +T  P+W  P  T  + +TD +     VV   D  L
Sbjct:  455 LQITFHGAQGLKNPDKFSGTPDPYAVVSINNRNELARTKTVHENANPRWSETVNIIITSL---KDA---LTITLYDFNEYRKDKELGTATFALEQL-ETD--------DEHENMHLEVMSGGRPRGVLQADVRFFPVLEGETLEDGTKEPPPESRTGIAKFTVEQAKDLDGSKSMIGTLSPYAVLLLNQREVHKSRVMKRTNQPIW--PDATKELLITDRKKAKLGVVIKDDRDL 672          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig796.19248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEV4_ECTSI9.540e-16267.19C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KE16_9PHAE7.920e-13949.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812SJQ6_SYMMI7.380e-2129.10Rasa4 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
UPI001CE1D8E85.170e-1732.56multiple C2 and transmembrane domain-containing pr... [more]
A0A2T2NI50_CORCC2.150e-1329.33Tricalbin n=1 Tax=Corynespora cassiicola Philippin... [more]
A0A2T3BEY7_AMORE5.120e-1328.88Uncharacterized protein n=1 Tax=Amorphotheca resin... [more]
A0A6A6JZY1_9PLEO5.130e-1328.63Tricalbin n=1 Tax=Westerdykella ornata TaxID=31875... [more]
A0A8E2ENW5_9PEZI6.810e-1328.51Tricalbin n=1 Tax=Glonium stellatum TaxID=574774 R... [more]
A0A6A6T4S6_9PLEO9.130e-1326.14Tricalbin n=1 Tax=Lophiostoma macrostomum CBS 1226... [more]
A0A6A6IBE4_9PLEO1.220e-1229.79Tricalbin n=1 Tax=Trematosphaeria pertusa TaxID=39... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig796contigF-serratus_M_contig796:112288..117069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.4
Seed ortholog evalue2.2e-143
Seed eggNOG ortholog2880.D8LEV4
KEGG koko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activator activity
EggNOG OGsKOG1030@1,KOG1030@2759
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons10
Model size1122
Cds size1119
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig796.19248.1prot_F-serratus_M_contig796.19248.1Fucus serratus malepolypeptideF-serratus_M_contig796 112288..117067 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932363.2214441-CDS-F-serratus_M_contig796:112287..1123261622932363.2214441-CDS-F-serratus_M_contig796:112287..112326Fucus serratus maleCDSF-serratus_M_contig796 112288..112326 +
1690964272.142197-CDS-F-serratus_M_contig796:112287..1123261690964272.142197-CDS-F-serratus_M_contig796:112287..112326Fucus serratus maleCDSF-serratus_M_contig796 112288..112326 +
1622932363.2394233-CDS-F-serratus_M_contig796:112788..1128991622932363.2394233-CDS-F-serratus_M_contig796:112788..112899Fucus serratus maleCDSF-serratus_M_contig796 112789..112899 +
1690964272.15605-CDS-F-serratus_M_contig796:112788..1128991690964272.15605-CDS-F-serratus_M_contig796:112788..112899Fucus serratus maleCDSF-serratus_M_contig796 112789..112899 +
1622932363.2552528-CDS-F-serratus_M_contig796:113634..1137361622932363.2552528-CDS-F-serratus_M_contig796:113634..113736Fucus serratus maleCDSF-serratus_M_contig796 113635..113736 +
1690964272.1696591-CDS-F-serratus_M_contig796:113634..1137361690964272.1696591-CDS-F-serratus_M_contig796:113634..113736Fucus serratus maleCDSF-serratus_M_contig796 113635..113736 +
1622932363.2671726-CDS-F-serratus_M_contig796:114118..1142651622932363.2671726-CDS-F-serratus_M_contig796:114118..114265Fucus serratus maleCDSF-serratus_M_contig796 114119..114265 +
1690964272.179311-CDS-F-serratus_M_contig796:114118..1142651690964272.179311-CDS-F-serratus_M_contig796:114118..114265Fucus serratus maleCDSF-serratus_M_contig796 114119..114265 +
1622932363.284043-CDS-F-serratus_M_contig796:114524..1146441622932363.284043-CDS-F-serratus_M_contig796:114524..114644Fucus serratus maleCDSF-serratus_M_contig796 114525..114644 +
1690964272.190432-CDS-F-serratus_M_contig796:114524..1146441690964272.190432-CDS-F-serratus_M_contig796:114524..114644Fucus serratus maleCDSF-serratus_M_contig796 114525..114644 +
1622932363.296095-CDS-F-serratus_M_contig796:114952..1151141622932363.296095-CDS-F-serratus_M_contig796:114952..115114Fucus serratus maleCDSF-serratus_M_contig796 114953..115114 +
1690964272.2033534-CDS-F-serratus_M_contig796:114952..1151141690964272.2033534-CDS-F-serratus_M_contig796:114952..115114Fucus serratus maleCDSF-serratus_M_contig796 114953..115114 +
1622932363.3147569-CDS-F-serratus_M_contig796:115524..1155901622932363.3147569-CDS-F-serratus_M_contig796:115524..115590Fucus serratus maleCDSF-serratus_M_contig796 115525..115590 +
1690964272.2132723-CDS-F-serratus_M_contig796:115524..1155901690964272.2132723-CDS-F-serratus_M_contig796:115524..115590Fucus serratus maleCDSF-serratus_M_contig796 115525..115590 +
1622932363.327158-CDS-F-serratus_M_contig796:115751..1158741622932363.327158-CDS-F-serratus_M_contig796:115751..115874Fucus serratus maleCDSF-serratus_M_contig796 115752..115874 +
1690964272.22596-CDS-F-serratus_M_contig796:115751..1158741690964272.22596-CDS-F-serratus_M_contig796:115751..115874Fucus serratus maleCDSF-serratus_M_contig796 115752..115874 +
1622932363.346051-CDS-F-serratus_M_contig796:116116..1163451622932363.346051-CDS-F-serratus_M_contig796:116116..116345Fucus serratus maleCDSF-serratus_M_contig796 116117..116345 +
1690964272.2369173-CDS-F-serratus_M_contig796:116116..1163451690964272.2369173-CDS-F-serratus_M_contig796:116116..116345Fucus serratus maleCDSF-serratus_M_contig796 116117..116345 +
1622932363.3619888-CDS-F-serratus_M_contig796:117047..1170671622932363.3619888-CDS-F-serratus_M_contig796:117047..117067Fucus serratus maleCDSF-serratus_M_contig796 117048..117067 +
1690964272.2474635-CDS-F-serratus_M_contig796:117047..1170671690964272.2474635-CDS-F-serratus_M_contig796:117047..117067Fucus serratus maleCDSF-serratus_M_contig796 117048..117067 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig796.19248.1

>prot_F-serratus_M_contig796.19248.1 ID=prot_F-serratus_M_contig796.19248.1|Name=mRNA_F-serratus_M_contig796.19248.1|organism=Fucus serratus male|type=polypeptide|length=373bp
LDPVWGGESQKGESFLLTIPHPREASLGGGGLAIEVFHDDFGDAGNFLGQ
VVVSGNDFLRLHSPGTFKGSEAQSVEAELQKKPEIPLSDQWLVRGMLFYT
LEGVDEGEENPTDVVTEDGDASSVGERARPIPRQRSQYRNLEIRIIEARG
LGSSDRFGVSDPYVVVRANRKKQLGRTRSVPSSLEPAWTDPEERFVVAVG
REKAARFDLTLEVWDDDNLGKGDFLGQVSLPKEELLELDLPTGPVECDLE
KNADEDDYFNKLVQGVLTFSIREAHGDMPDEPQDRERVGEVLLTVLSAKG
LAKVDYFVESDPFAVVLLNRREIGRTRTMFKTLNPVWSKPRETFSVRVTD
NRHRSSVVVQLWDNSLGEQGDFL
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mRNA from alignment at F-serratus_M_contig796:112288..117069+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig796.19248.1 ID=mRNA_F-serratus_M_contig796.19248.1|Name=mRNA_F-serratus_M_contig796.19248.1|organism=Fucus serratus male|type=mRNA|length=4782bp|location=Sequence derived from alignment at F-serratus_M_contig796:112288..117069+ (Fucus serratus male)
CTCGATCCGGTATGGGGAGGCGAGAGTCAAAAAGGAGAGGTGAGATGACG TTCACGCCCTGAACAACGCCTTCGCATACGGGGAGAGTAGGTGGCGTTTC AATCGTAGATTTTCTAAGGGGCAGTTAACACCGACCGATTGATCGTCCTG GCTGGCGCGCATCCAATTTGGCGAAAATGACATCATATTCGCGTCGTTCC GTTAATTACTCGGCCAGCCTTGCTACCGAGCGTTACGCCAGTCTTGCATT CCTCCGGCAGACCCCACCTACCACGGGCGCGAAAGACGTCTATCAAGCGC GGTTTGACGCAATTCGAACGTAGGGGCATGTTCCATAGCGGGGACGGTAA CACTGCCGTTGAGGAACGGATATGGTCAACAGAAATGAGTAGGTCTTAGC TTAGACCAACATTACACGAGTACAGTACTCACTATCCAGCTGGAATGTCC CTCGCGGTGCACTCACTTTGCAATCAATCCTTTGCCGAATCCTACGGCCA GAGCTTTTTGCTGACCATCCCGCACCCTCGGGAGGCGTCTTTGGGAGGGG GAGGACTCGCCATCGAAGTTTTCCACGACGATTTCGGTGATGCGGGTAAC TTCCTTGGGCAGGTGAGCCGCCTCTTGCCCCCTTACACACCCTACGACAG AGATAGTAGGACAGTGTCCTCCCACGGACTACGCGGCTTGATCGTCATGG GCTTTGGATTCTGACTCCACGTTTGAGTTGCGGGCTTTCTTGCCCTCTTC TTTACTTTTTTTTAGCATAAACTGTGAGATCTCGCCTCCGACCCCCGTTG ATCTCTTTGCAACGAAGCATGCACATGCGTCGACAAGGGCGAAAATAGAG ACGTTTTTATGTACATTAAGTTGTTTATTTTATTTTGCCTCCCTCCTTTT TTTTTCTCTTACCCAAGGTTTCTATAAATAACGAATGTAGTCGGATGCTA AACAGCCTAGACCAGTTAGCTGACTGGCAAATGCTACGGTCGAGGGTTTG AGTCTTAGACAAGAAGCAACCTTGAGGGAAATTAATACTGGCGACGAAGA AATTCTCGGGAGGGGGGGAAGGATGACTCTGACAGGACAGGGCATTACTT ACTTCATGTATAAATAGACACCCAGACTGGCAAAGGGATAGGGGCTCTTC TCAGAGTGGAAGAGGCGGCCGATCACTGAACCCCTTGGACAAAAATATTG TTGCTGAAAATTAACAACCTATCCCAGTCAGTATTGGCTGCTGCCTGGGT GATAAATTCCTGGCTAGACGAAAACGGACGAGGCAAAGGCcatCATGGCC TCTCCCTCACCTCCCCCCATCTCCGCTGCCGCTAAAACGCTAACCAGGTC GTAGTTTCGGGCAACGACTTTCTGCGCCTTCACTCACCGGGCACGTTCAA AGGTTCCGAGGCTCAGAGCGTTGAGGCAGAGCTTCAGAAGAAACCAGAGG TGAAAAAAAGTGGCACCCCAAGTATGGCGGCGTGGACACGCTGGGGCTGA AGCAAGCTCTTGTCTACATCGACAGATGATACTACAATCCTCTGTTCAGT TTCCATGTCGGGCTATGCCGGGTATTTTTAACTTCGTGATATTTCCGACA AGCTTCGTGTGGGTTTTTGCCACATCTCGCTGAATCGACGCTCTTCCGCG ATACCGGGTTCATTTCTCCGCCAATCGGCCACCAAGCCTGTATTCATGAC GCTTTTTGGCAAGTGTGTAGCTTGGCAACACTCGAAACAGTGATTTCCCC CTGATTCAGAAGAGGGCGGCGTGTGATCAACTCTCTTTCCTTCCCCCCTC CCCAATACGCGTCGCTCGCTTGGAGCGACAGATCCCGCTGTCTGACCAAT GGCTGGTTCGGGGCATGCTCTTTTACACGCTGGAAGGCGTTGACGAAGGG GAAGAAAATCCGACCGATGTCGTTACCGAGGATGGAGACGCTTCCTCGGT GGGAGAGCGGGCTAGACCGATCCCTCGGCAGGAAAGAGGGGGCGACGTTT TGCTCTGAAAGTACTGGAGCTTTCATTGGAAGCCTAGGAAAAAGAATGCG TAGAAGGCATAAAGTAGTGACGCAACAACACACCGCGATGGCATGTTTTT GACCTGCCGCGGCATGGAAAGCGATGCCTTGCGCAGAATGTCCCGAAGAT AAACCCACCGAACGAAACCATTGAACGCCGCCTCCTGACCCCGACCCTAC GTGAATAGCGACCTTTCGAATTCGTCCACACCATCACCAGCGCTCTCAGT ATCGGAACCTGGAGATACGGATCATAGAGGCGCGAGGCCTCGGAAGTTCC GACAGGTTTGGTGTTTCCGACCCGTACGTCGTCGTACGCGCAAACAGAAA AAAACAGGTGATGATTTGGAGGCTTTTTGTTTTGTGCGTTGTGTGGAGAG AATACTGACTATTAAGTCGCAGCTCGTCTTGGCGATATTATCCCACTTAT CGACCGGATGGAAACTGCTCACTCCAGCTGTACAGCGATCGGAGCCTGGA GAAAAGCAATCGACTCTTACCCCGGTAAAACGCGGGTAATTAAAAGCTTC TTCGTATTTGATAGATCGAATAGATCGATCGTATGCGCGAGAGAACATTA TTGGCCCAATGGCAAGCCGTTCCCGACTTCTCGACGCCGGAACTTCCGAT CGCGAGTCATCTCAGCTGGGACGCACGCGCAGTGTGCCGTCCTCGCTGGA GCCAGCGTGGACAGATCCGGAGGAACGGTTTGTCGTGGCGGTTGGCCGGG AAAAAGCAGCTAGGTTCGATCTCACCCTCGAAGTTTGGGACGACGACAAT CTTGGGAAGGGGGACTTCCTGGGGCAGGTAAGCGCAAGAATGGACCAACC GTGGAACGGGACGGCAGGGTGGGCGCCAGGGTGGGGGGTTAAGTCGCCTT CACTACATGAAAGGAATGGAGTGTAGCTCGTGATGTTGAATGGGTCGTAT TTTTCCCTTTGAAGTGTTGACATCAGTCGGCGTCAGATACAGCAGCAACA ATCGGAGCCCTTCAACTCACAAAAGACTCCATATACGATTTGTCCTACTA GGAATCCTGACCCAGCGTGGTCTTTTGAAAGAACAAGTTATGCTAGCCTG TTGTCACCCATTGGTCAACCATGTAAGGGTTACAAGTAGGCGTTTTACGA ATCCGGTCGGCCCGCTGTATTACCGCTCGAAGCCCGACGTCACACGTTCC TCGTTTCCCCCATCCCTAAAAAATGGATGCGCTAAAGGTTTCCCTCCCTA AGGAAGAGCTCTTGGAGCTTGATCTTCCCACTGGGCCCGTGGAATGCGAC CTGGTGAGTCGTTGCAAATAGTCCCATAACCTCTTGCGGGTCGTATTTTT CGGGTTCTGTACTCGGCACGAACTACTAATAGTTTGCCGAGCGAAAGGCC TTGGCCTTTCGAGAGGAGAAACGAAATTAAAAAATGCTCACTCATCGATA CATTCTCAAAACAGGAAAAAAACGCCGATGAGGATGACTACTTCAACAAG CTTGTGCAGGGCGTGCTGACGTTCTCGATCCGAGAAGCCCATGGAGACAT GCCCGACGAGCCTCAAGATAGGGAACGCGTGGGGGAGGTACGGGCGTTTA ATACCCTCTCTATATCCGACTGCGGTGCTAAGGATGCCTCGGTCGACATG CGTGAAATCAGTTAAACACAGCACGCTCGCGGCGAGCCAACGAATGAAAA CGTTTATTTTGAAAATCCCTCTTGAGACACGCGCCGGCTTGCATGCTTGG AGACGCTGTTGTCCTCCTCCGAGACGACTATCTGCGGTTTTGTCTCCTTC CCCCCCCCATCTCGACGATGGCGTTTTAGGTGTTGCTGACGGTTCTTTCT GCGAAAGGTCTGGCGAAGGTCGACTACTTTGTTGAATCAGACCCGTTCGC GGTGGTCTTGCTCAACCGTCGAGAGATCGGCCGCACTCGGACAATGTTTA AGACTCTGAACCCTGTCTGGAGCAAACCGCGGGAAACTTTCTCTGTGCGG GTGACGGACAACAGACACCGGTCCAGCGTTGTCGTGCAGCTATGGGACAA TAGCCTAGGTATGCCAGGCAGCCACTATGGCGATGTTTGGACTCTAGATG TTATTTATCCTCGACGCTACGGGATCTTGCCCAGCGTTAGAATTTAGCAC CTCGGAACCAACAGTTGAAGGAGGGAGCGGGTTGAACGGTGCCCCCCCCC CCAAGGTGAAGGATAGGATAACGGTATCAACACCGATCCTCCCAGATAAC AGTTTAATTGAGTGGCATGTCGGTATAATGATATGGAGATCGTTTGTTCA TTTCCCCCGATGAGCTGTTTTGACACCGTCCTCTCTGGAGTCGGTGTCAT ATTCGCCAAACTCTCCCATTGGTCCTTTAGAGCTATACCAGTCAGTACTG ACCGACTAACCTGACCAGTTAGTTCGTTAATATCCGGTAATTCTAACCGT TTATCGTGGGGTCCGAGTCTCGGTGTGTTGAGTTTCTCTTGTTCTACGAA CCCAAGGTCTAGCAGACGGAAATCAACCCACCAGACCGCTAGGTACTTCA TTTTCTGCTATAGATCTCCCTCGTTTTTATCCCTGAGTGGTTCAGGGTGG GATGATTCTCGACCACTGTAATTATTTGGCATGTCTGTTCCTGTGATAGG TCGGCCAACGTTATCGCCATCCCTAACTACGCGGTGTTAGCCGAGTTCAT CTGGCCCAGTCGTGCGTGACTCGCGATACAAGCAACAAATAATGATGCCG TCTTTCATAGGAGAGCAAGGAGATTTTCTCGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig796:112288..117069+

>mRNA_F-serratus_M_contig796.19248.1 ID=mRNA_F-serratus_M_contig796.19248.1|Name=mRNA_F-serratus_M_contig796.19248.1|organism=Fucus serratus male|type=CDS|length=2238bp|location=Sequence derived from alignment at F-serratus_M_contig796:112288..117069+ (Fucus serratus male)
CTCGATCCGGTATGGGGAGGCGAGAGTCAAAAAGGAGAGCTCGATCCGGT
ATGGGGAGGCGAGAGTCAAAAAGGAGAGAGCTTTTTGCTGACCATCCCGC
ACCCTCGGGAGGCGTCTTTGGGAGGGGGAGGACTCGCCATCGAAGTTTTC
CACGACGATTTCGGTGATGCGGGTAACTTCCTTGGGCAGAGCTTTTTGCT
GACCATCCCGCACCCTCGGGAGGCGTCTTTGGGAGGGGGAGGACTCGCCA
TCGAAGTTTTCCACGACGATTTCGGTGATGCGGGTAACTTCCTTGGGCAG
GTCGTAGTTTCGGGCAACGACTTTCTGCGCCTTCACTCACCGGGCACGTT
CAAAGGTTCCGAGGCTCAGAGCGTTGAGGCAGAGCTTCAGAAGAAACCAG
AGGTCGTAGTTTCGGGCAACGACTTTCTGCGCCTTCACTCACCGGGCACG
TTCAAAGGTTCCGAGGCTCAGAGCGTTGAGGCAGAGCTTCAGAAGAAACC
AGAGATCCCGCTGTCTGACCAATGGCTGGTTCGGGGCATGCTCTTTTACA
CGCTGGAAGGCGTTGACGAAGGGGAAGAAAATCCGACCGATGTCGTTACC
GAGGATGGAGACGCTTCCTCGGTGGGAGAGCGGGCTAGACCGATCCCTCG
GATCCCGCTGTCTGACCAATGGCTGGTTCGGGGCATGCTCTTTTACACGC
TGGAAGGCGTTGACGAAGGGGAAGAAAATCCGACCGATGTCGTTACCGAG
GATGGAGACGCTTCCTCGGTGGGAGAGCGGGCTAGACCGATCCCTCGGCA
GCGCTCTCAGTATCGGAACCTGGAGATACGGATCATAGAGGCGCGAGGCC
TCGGAAGTTCCGACAGGTTTGGTGTTTCCGACCCGTACGTCGTCGTACGC
GCAAACAGAAAAAAACAGCAGCGCTCTCAGTATCGGAACCTGGAGATACG
GATCATAGAGGCGCGAGGCCTCGGAAGTTCCGACAGGTTTGGTGTTTCCG
ACCCGTACGTCGTCGTACGCGCAAACAGAAAAAAACAGCTGGGACGCACG
CGCAGTGTGCCGTCCTCGCTGGAGCCAGCGTGGACAGATCCGGAGGAACG
GTTTGTCGTGGCGGTTGGCCGGGAAAAAGCAGCTAGGTTCGATCTCACCC
TCGAAGTTTGGGACGACGACAATCTTGGGAAGGGGGACTTCCTGGGGCAG
CTGGGACGCACGCGCAGTGTGCCGTCCTCGCTGGAGCCAGCGTGGACAGA
TCCGGAGGAACGGTTTGTCGTGGCGGTTGGCCGGGAAAAAGCAGCTAGGT
TCGATCTCACCCTCGAAGTTTGGGACGACGACAATCTTGGGAAGGGGGAC
TTCCTGGGGCAGGTTTCCCTCCCTAAGGAAGAGCTCTTGGAGCTTGATCT
TCCCACTGGGCCCGTGGAATGCGACCTGGTTTCCCTCCCTAAGGAAGAGC
TCTTGGAGCTTGATCTTCCCACTGGGCCCGTGGAATGCGACCTGGAAAAA
AACGCCGATGAGGATGACTACTTCAACAAGCTTGTGCAGGGCGTGCTGAC
GTTCTCGATCCGAGAAGCCCATGGAGACATGCCCGACGAGCCTCAAGATA
GGGAACGCGTGGGGGAGGAAAAAAACGCCGATGAGGATGACTACTTCAAC
AAGCTTGTGCAGGGCGTGCTGACGTTCTCGATCCGAGAAGCCCATGGAGA
CATGCCCGACGAGCCTCAAGATAGGGAACGCGTGGGGGAGGTGTTGCTGA
CGGTTCTTTCTGCGAAAGGTCTGGCGAAGGTCGACTACTTTGTTGAATCA
GACCCGTTCGCGGTGGTCTTGCTCAACCGTCGAGAGATCGGCCGCACTCG
GACAATGTTTAAGACTCTGAACCCTGTCTGGAGCAAACCGCGGGAAACTT
TCTCTGTGCGGGTGACGGACAACAGACACCGGTCCAGCGTTGTCGTGCAG
CTATGGGACAATAGCCTAGGTGTTGCTGACGGTTCTTTCTGCGAAAGGTC
TGGCGAAGGTCGACTACTTTGTTGAATCAGACCCGTTCGCGGTGGTCTTG
CTCAACCGTCGAGAGATCGGCCGCACTCGGACAATGTTTAAGACTCTGAA
CCCTGTCTGGAGCAAACCGCGGGAAACTTTCTCTGTGCGGGTGACGGACA
ACAGACACCGGTCCAGCGTTGTCGTGCAGCTATGGGACAATAGCCTAGGA
GAGCAAGGAGATTTTCTCGAGAGCAAGGAGATTTTCTC
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