mRNA_F-serratus_M_contig791.19194.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig791.19194.1
Unique NamemRNA_F-serratus_M_contig791.19194.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig791.19194.1 vs. uniprot
Match: D7G541_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G541_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 4.860e-47
Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 1
Query:  379 LQVEAERQARRNWQGVLKDASIRTGDIRELSSSTPPRVVYDKALTEEGFIGFARDLDLLALPFVTHAGLASLFRKHACHMSPGVVLRSRAKGLFGHFCKLRRENILGKEEIDKLLQSLGLPNVSDQEALSYTFANGTWDLHGFLRHLHDRGWIPSVRDDD 858
            ++ E ERQA + W+     A    GD  E   S P RVV++ ALTEEGF+GFARDLD+LALPF TH GL SLFR++A  ++ G  L++RAKGLF   CK    + LGKE+I KLL  LGLP +SD++AL YT+A+G WD + F RHLHD  WI  V D D
Sbjct:   35 VKAEVERQATQLWEEGFTYAPAMNGDDTETPPSAP-RVVFENALTEEGFLGFARDLDILALPFATHTGLISLFRRYASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPRISDEDALPYTYADGMWDYNAFCRHLHDNQWITEVADGD 193          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig791.19194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G541_ECTSI4.860e-4753.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig791contigF-serratus_M_contig791:7129..21214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size943
Cds size924
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig791.19194.1prot_F-serratus_M_contig791.19194.1Fucus serratus malepolypeptideF-serratus_M_contig791 7147..21214 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932352.334826-UTR-F-serratus_M_contig791:7128..71461622932352.334826-UTR-F-serratus_M_contig791:7128..7146Fucus serratus maleUTRF-serratus_M_contig791 7129..7146 +
1690964266.6616538-UTR-F-serratus_M_contig791:7128..71461690964266.6616538-UTR-F-serratus_M_contig791:7128..7146Fucus serratus maleUTRF-serratus_M_contig791 7129..7146 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932352.3527806-CDS-F-serratus_M_contig791:7146..72901622932352.3527806-CDS-F-serratus_M_contig791:7146..7290Fucus serratus maleCDSF-serratus_M_contig791 7147..7290 +
1690964266.6733878-CDS-F-serratus_M_contig791:7146..72901690964266.6733878-CDS-F-serratus_M_contig791:7146..7290Fucus serratus maleCDSF-serratus_M_contig791 7147..7290 +
1622932352.3664308-CDS-F-serratus_M_contig791:18517..186221622932352.3664308-CDS-F-serratus_M_contig791:18517..18622Fucus serratus maleCDSF-serratus_M_contig791 18518..18622 +
1690964266.6860833-CDS-F-serratus_M_contig791:18517..186221690964266.6860833-CDS-F-serratus_M_contig791:18517..18622Fucus serratus maleCDSF-serratus_M_contig791 18518..18622 +
1622932352.3835135-CDS-F-serratus_M_contig791:18938..191341622932352.3835135-CDS-F-serratus_M_contig791:18938..19134Fucus serratus maleCDSF-serratus_M_contig791 18939..19134 +
1690964266.7032185-CDS-F-serratus_M_contig791:18938..191341690964266.7032185-CDS-F-serratus_M_contig791:18938..19134Fucus serratus maleCDSF-serratus_M_contig791 18939..19134 +
1622932352.4005535-CDS-F-serratus_M_contig791:19402..195651622932352.4005535-CDS-F-serratus_M_contig791:19402..19565Fucus serratus maleCDSF-serratus_M_contig791 19403..19565 +
1690964266.7150812-CDS-F-serratus_M_contig791:19402..195651690964266.7150812-CDS-F-serratus_M_contig791:19402..19565Fucus serratus maleCDSF-serratus_M_contig791 19403..19565 +
1622932352.4205623-CDS-F-serratus_M_contig791:19964..201021622932352.4205623-CDS-F-serratus_M_contig791:19964..20102Fucus serratus maleCDSF-serratus_M_contig791 19965..20102 +
1690964266.7249475-CDS-F-serratus_M_contig791:19964..201021690964266.7249475-CDS-F-serratus_M_contig791:19964..20102Fucus serratus maleCDSF-serratus_M_contig791 19965..20102 +
1622932352.4343293-CDS-F-serratus_M_contig791:20481..205811622932352.4343293-CDS-F-serratus_M_contig791:20481..20581Fucus serratus maleCDSF-serratus_M_contig791 20482..20581 +
1690964266.735346-CDS-F-serratus_M_contig791:20481..205811690964266.735346-CDS-F-serratus_M_contig791:20481..20581Fucus serratus maleCDSF-serratus_M_contig791 20482..20581 +
1622932352.4597306-CDS-F-serratus_M_contig791:21136..212141622932352.4597306-CDS-F-serratus_M_contig791:21136..21214Fucus serratus maleCDSF-serratus_M_contig791 21137..21214 +
1690964266.7522652-CDS-F-serratus_M_contig791:21136..212141690964266.7522652-CDS-F-serratus_M_contig791:21136..21214Fucus serratus maleCDSF-serratus_M_contig791 21137..21214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig791.19194.1

>prot_F-serratus_M_contig791.19194.1 ID=prot_F-serratus_M_contig791.19194.1|Name=mRNA_F-serratus_M_contig791.19194.1|organism=Fucus serratus male|type=polypeptide|length=308bp
MNSHIKRRERGVVLPEVRSLVDGRPDNIGTLVTSDSRKRQRRTARGKQRL
LYESRARALATREKYASMGKHERQCAAILSLQRAWRSYKLKRLIPLTIQC
MRNARRWTPATLFKMYVSLELQVEAERQARRNWQGVLKDASIRTGDIREL
SSSTPPRVVYDKALTEEGFIGFARDLDLLALPFVTHAGLASLFRKHACHM
SPGVVLRSRAKGLFGHFCKLRRENILGKEEIDKLLQSLGLPNVSDQEALS
YTFANGTWDLHGFLRHLHDRGWIPSVRDDDVQEINDYDECCASGSQGSEG
YTSSSAGP
back to top

mRNA from alignment at F-serratus_M_contig791:7129..21214+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig791.19194.1 ID=mRNA_F-serratus_M_contig791.19194.1|Name=mRNA_F-serratus_M_contig791.19194.1|organism=Fucus serratus male|type=mRNA|length=14086bp|location=Sequence derived from alignment at F-serratus_M_contig791:7129..21214+ (Fucus serratus male)
AAAAGCTACAAGATCACCATGAACTCACATATAAAGAGGCGAGAACGAGG GGTCGTTCTTCCAGAAGTACGGTCCCTGGTCGATGGTAGACCCGACAACA TTGGGACGCTTGTAACGAGTGACTCGAGGAAGCGTCAACGTCGAACTGCG CGGGGAAAGCAGGTATCTCCATTACGACACGCTACCACCGTACCGGTATA TTTCTGGGGGAAGTACACAGCACGAAAAGCTATAAGAACAGCAGCGCCCA ATAATATCCAGCTCAACTCTAGCCGTCTAAGGCGATATCATTTTCTATGT CCCCAAATTTCAAGTCTCAACGCCTTTTTGCGTGCTGTGCGCTCGCACGA TCAAACAACCTTAAAAAAAACTCATACAACCACCACAGCAAAGTGCGGCG TAGTAACAGTTACCCTAATTTCACCGCACTTCCGGGTTGTCCTGCGAACT TCTGGGTTCTTCCCTTATTTAACTTACTCTGTAGAAATTCCTCTGCAACT CTAGATGCCCCATGTGGACTATTATTTACATTTTAGATATAACATGTAGC CCACAGGACGACTAGACACCTGTAAATATCATTTTCCGTACATACTTAGA AGCTATCACGAATATATTTTGGCAGAGCCTCCAACCTACGACTTCTAACC TACGACATCTCTGCGCACGGTCTCCAACCACCAGCCCCCAAGATGTCATG ACTTCTTGGATTAAAACTTAGCGGAGGATCTCTTGAACCTTGGAAAGAAC ACTTCGACGACTTTTTCTTTGGGACTGTACGGAGGGTCGTTACTCGGTTA CTTGAGGCATACCTCGTCATACCTCGTCACTTGATTTTGCTACCTATGCT CCTACGTTCTTTCTGATTATTTATCCGGTCTGGCGCGTGGACGGTTGCGC TTCGATCGATACTGTACACGAGAAGCATCTGACGTGCAGTAGCCCTGATA AGTTCTTCCGTGCGTTCCCCCTCATCTGCCTCTTTCTTCCTTATGCGGCG CTCCCCTGCTCTTCGTCTACTAATATTTTCAAGTGAACACCGGTTTCTGG CACTTTCTGGTTGTTATGCTGACATACCTGGTATTCATTCTACGATGATG ATGATGCTCCTCGTATTCTCGAATCCTGTTATTGTAGCATACCACGCTTC CAATAAGCGCAATGTACCGATACCTGCATGTTATTAAATTACTACATTTA GTGCAGAAATAAGCATATTTTTTACCATCATTTTCCACTTTTCAACGATT TCCTTTCCTAATGATCAAATTCTAGTCTGTTTGTTGTAGTTCGAGTAACC GAAAACCATTAGAACTAAATTTTGTGACCTTCCTCTCTTATCTCCAATTA TAATAAAATAGTGATGATACTTGTGCGACTGTTATGGTATATTCTACAAT CGACTGAAGTTCATCACCACTACTATACCAAACCCGATATAACATAATTT ATTAACTGAGTAACTCTGTATCTAGGGCACTCCAAGGAGCCCTCCATGGA GCTCCATGGAGGCTCATGGAGCTcCAGGCCTCCACGGACCTTCATGAAGG CCTGGCGGTCCGTGGAGGCTCCGTGGAGGCCTCCGTGGAGGTTCGTGGAG GCATCCATGGAGGTCCGTGGAGGCCTCCATGGAGCTCCGTGGAGACCTCC CCGGAGGCTCATGGAGCTCCATGGAGTTCCGTGGAGGTCTACGCGGAGGC TCATGAGCCTCCATGGAGTGCCCGATAATGTAAGACACTGCACACGGTGT ACTTTGCTGTTGTTTTGGTGTTCCCGCATGGTGAATAATGTAAGTTCTAC AGTATAACGGTGGGTTTCTCCCCGATATTATACTGTTGATTTTAAGGTAC TAACATTGGGGATGTTGCACCTTTTTGATCCCATGGAGAGTTTTTGTCCC TAGAGCCAATGTTCCCACCTAACTAAACGTCTTGACATCCCCCCCCCCCT GATTGGGTGGATACCTATTAATTTTAATAGAAGGTTTAGATGCTTTCAGG TTTTTCTTTGAAATAATTTCAGGTGATTAACGGTCTCTGGTACTTTCTAT TATATATTATGTTCAAGACTTGTTTGGCGGTCCTCTTTTTCACCTCTTAC TATAACCCTTACTCAACACTCTTTACCTCTGCCTGCTTAAAACCTCTATA TGATTAATAGTAAATACCACGAAGATACTTGTAGATTCGTTTTGCCCATA CCAACAAACAGCTACTTAATCCTGCCACGCACACTTTTTTTTTCGCCTTC ACAAAGATATATTGTGGTACTGCAGTGTTTTTATGGCTGTATTATATCAC TAGCTCTACTTGTTTGGGGGTACCCGGTGGCCCGGTGGTTGGCATGATAT CCGGAGCCTCTGGGGTTTTTGCACGTGACGTTGCGGTTTGGTTTGATGAG TGGTGAGTGACTGAGCTTTCTGTCTCGGGGATCGTGTTTCACTGCAGGAG GGCAGACCTGCAGGACTGCAGGACGATACGCATGTATGTCTGCATGACTG CTTGGTGGCAAATGGAGCAAGCATGTTTGTAATAAATATACCTTCACGGC ACGGCTGCTAGGGTTTTAACATTTGGTCACCCGCCGGAAACTATAAATAG GGTGTTAACGTATGTTCACCTGGTCGCCTCCTAAAACACGATATCGTTTA GGGAAAGGCTTTCAAGCCCCTTTCGGTAAAGCAGAAAATAGAAACCGTGG AGTAAGCAGTGAGGAACAAGGACTACAAATGCTGAGGTAGGTGGACAGGG CCTTCTCGAGCGAAAGAAAATGAAGTGAAGACTGAGGCGGTCGAAGGAAC CGCCAGACACAGTGCATAAGGTAGATTTGTACGTTTTTGTTTTTTTGAAG ATGACATTTGTACGCAGTACGGAAGCGCAAGTCGACGTTATCGTGCGAAA CCATTCGTACGATACCACAGCGGCGGCAACGGTACAGCACTGTCGCCACA GCAGCAGCCAGCCCCGCGCCTCTTCTCCAGCTTTGGCTGGGAGCAGAGGT ACAACAGCGACGGCACAGCACCGTGGCCGCAGCAGCAGCCTATCCCCCGC CCCTTCTGTAGCTTTGGCTGGGAGCAGAGGAGCGCTTGCCGCAATGGACC GCCGGTGAATGGTGGACTGGCGAGTAGCATCGCGCAGGGGTACCACAGCG GCGGCGACGATACAGCCCTGTGGCCGCAGCATCAGCAAGGCCCCTGCCCC TTCTGTAGCTTTGGCTGAGAGCAGAGGGGCGCTTGCCGCAATAGACCGAC GGTAAATGGCGGACTGACCCTCTCACCACCAACCGCCGTTATTTCGAACT CGGCATTTAAGGAGTGGCTTCACTCGGACGAGATGGAGATGCCGGTGTTC TCCCTGTCAGAGGGACCACAGCAGTCGGCGCCGACGGCAGTGGCACTTGC TGCAGCAGCACCTGCGGCTGCAGCGGTGACCGGCATGCGTGTCTTCCCCG CTGTGCCGTCGAAGGGTCTGGGGGGAGCGCCCGCATCGTCAGCGGGCGCA GCAGCGCCGGCGACCGGTGGTACTGTTTTCCCCACTTCGTCGGTGGGGGG GCGGCCAGGGCGCCCGCGTCTGCCGATGGAGCGGCATTGACGGTGGCCCC GACGACCGGCGGTACCGTTCTCTCCGTTGCTTCAGTTGGGGGAGCACCCG CATCGTCAGCAGTAGCAGCGGCATCGGCAAAAGCATTGCCGGCGGCCCCG GCGACTGGCGGTACTCTTCCCTCCACCGCATCAGTTGTGGGAGCACCCGT ATCGTCAGCTGTAGCATTGGTATCGGTAGAAATATCGGCGGTGGAACCGG CGACCAGTGGTACTGTTCCCTCGGTCGCATCAGTTAGGGGGGCAGTCGGG GGGTGCGAGTCGTCCACAGGAGCGGTATCATCGGACGCGGAAGCGGAGGT GGCACCGTCGATCGCTAGTACTGCTGCCCCTGTTAAGTTGGCGGCGAGGG CGACTAGAGCGCTCGCGTCAGCAGCTGAGTCCACTGGTGACAGCTGGGTA TCAAATACCTGCGGCGAGAGGGGGGCGTCCAACCACCCATTTGATCCCGG TACTGTGTATCCGCTGGAGGTCCGCTACAGCAGCGACGGCATGGCAGCAG CAGCAGCAGCAGCAGCAGCAACGAGAACACTATCGACCACGACTCCTGGT GGGATGCAACCTGTGTTGGAACACTTCTGCGACCCTTTGATCCGGGGAAG CGATGCCGGCAGCGTATGAGGAGAGGAAAGGCGGTTCTCGGTGCGAATCT CTCTTTTGACCGCGGGAAAGAATGGGGGCGAATGCGGCATGAAGGGTGAC GGGCTTCGTGCTGAGGGTGAGTTCTTGGTTTGATTTGGCTTGTGCCGAGT ATGACTGGAGAATCACGTGTTTGAAACTGCGTTGGTTTCCTCTTGTAGTG CTCACGAAAATCATGAGGGGGGAGAATATGATATCATGATCCTCGTCGCA GTACAGGCAGATTTGTTGTCCGCGACGCAGCACAGGTAGAACTCTGGTCG TTTCGGGCTGTTGGATTTCATTCTTGAATGCATATTTTTGAGTTTAAATT TGCGCACGTCGAGATCTGGTTTTAATCTTAATGTGCTCCAGAGCAGCTTG TCTCCGTGGTAACTGCTAACAACGGGCATTTCCATATTGCCGCGTTTTTC CTGCGGTATCCGAACTTGATTATTTACTACTTGAACATGTATTAATAGTA TTTTCGGATGGTTTGAACTTTAGCATTTGGGAAATGTTACAACAGGGGGA CTCTTAATAGATTCTTGGTTGTTTTGATATTGATTGGAACAAGAGCAGTA TTAGTAATGAAGGTTTTCCCTGGCGTTCAATATTTTCATGCGCTGGGTTT TCAACTTTGACTGTTTTGGATTTTTTCTCACGATATTATCGTGCTAAATG TCAAATCCTGGGGGGGGGAGTTGAGTATCACATACTTCAACACATATTAA CATGAAAAAGGGATACATTTGTTTTTGGATTGGATTTTGGTCATTGGTTT CGGATATTTTGATGACCGATCCGCGTTTTACCTGCGGAAATTGAGAATTG AGAGAAGCATTGGAACAGGGGGGGTTCTTAAATGTCTGGATATTTTGATG CAAGGAATGGTAGATTATCGAAGACTTGGAGATTTCGGAGATCTGGTAAA TCCGTGAAGACTTTGAGAGATTTGAGAGATCTGGGAGACCTTCAGTTTTA CGAGATCTGTTGGAACTGGAATTGTTGCCATTTTACCTGGCAAGTTTTGA AGAGTCTCCGGAATCGTACCTCGCACCGAGTAAGGGGGCTGTTTGGGGTA CCCGGTGGTCGGCATGATATCCGGAGCCTCTGGGGTTTGTATAAGATGCA TGAGACGTTATGGTTCGTTTTGATGAGTGGTAAGTGACTGGGCTTTCTGT CTTGAGGCTCGTGTTCACTGCAGGAGGACAAGCCTGCAGGACTGCAGGAC GATACGTCTGTATGTCTGCATGACTGCTTGGTAAATTGATCAAGCACGTT TATAATCAATACCTGGTATACCTTCACGGTACGGCTGCTAGGCTAGGGTG TTAACGTTTGTCCACCCGCCGGAAACTATAAATAGGGTGCTAACGTATGG TCATCTGGCCGGCCTCTGAAACACTACTATTTGTAAAAACTGCGCTACCT AGATAACACCACATCTTTCCCTTTTGAATTTCTAGTAGCTAGATTCACCT GATAATTATTAGAGACTAAACTTGTGCCTTTCCTTGACAAACTGTCATTT GTTTGCCTCTATTTTGGTGTACCTGAATGTTATATACTATATACTATATA CTGGTAGTGATTAATGTAAGTCTATAGTTTAAAGGTGAGTTTTCCCCCGA CGTTATACTGTTGACCCTGTGCTACTACCATCGGGGAACCCGGGCAAATG CCATGAAGAGGTTTTGCCCTTACAGCCTATGCCAACTCTCCACCTAACTA AACGCTTTGACATCCCCCCCTCATTGGGCGGATACTAGTAATTCTAAAAT CTAACAGAATGTTTAGCTTTAGATGTGTTCAGATGTTTCTTTTTAAAAAT GTATCAACGCACCCAACTAAATATGCTCGACTTATTTCTCCCTGGATGGT GTGAGTTCTTGGAACTGAGGTTTAGATGCGTTCAGATTATTCATTAAACT GCCCTGACTACGAGCATCTACACCGTCGGGGGGAAGTGTGTCGAATTTAT TGGTAGGGAACATCGGCCCAACTCTAAACACATCCAAACCCTCCGAACAA TCGTCGGCGAGACTCCCATCTGAACACATTCAAATCTCCAGACCATCAAC CCCTTTCGGGGCCCTTTCGGGGCCCTTTCGGGGCCCTTTCGGGGTCCTTT CGAGGTCCTTTTGGGGCCCTTTCGGGGCCCTTTCGAGGCCCTTTCGAGGC CCTTCCGGGGAAACTGGGGTCATGAGGTTTGAGTGGCTACACGCCTGACC TGCCAACAGTCCCGATTGGCGGCGATGAACCCCAACAAAGCGAAATCGTT TCCCGCGGTAACCGTGCCTGCGGTAGCAAAGTTGGGACATCGCCGCCGCG GAAACGTGGGACCCGAAGCGAGGGGAGGAGGAATGCTCGGAGGGCACAAG CGAGTAAGTGACAGTGTCGACGATGGAGAAGTCAAGGCGTGGTGAGATTG CCACACCCAACACGTTAAAAGAAGGAAGGTAAGAACCTGGGTAGGAAACA CCTGGAGGAACTGAGCGAAAGGTGAAGGACATTTGCTCGAAAAAAACGAC CGGGGAAGCGGGCGGAGAGGAAGTCTGTCCTCAAGAAACACAAGGCCACC AGGGCGAGGTCTCGGCTGGAGGAGATCACGGTCGGCACGTTCAACGTTCG CACAGCAGCGGTCAATGGTGTCAACGGTATCGGACACATCGACACTCTGC TGAGAACCTGTGCTGCAAGGGGTCGTGACGTCATCGGATTGCAGGAAACC AAAATGGACGAAATTTCCGAAATTCTACATCTGGATACCGCGTTTTTTTG TGGTGATTGCAGCATGGTTAAGGGAAGGAAAGGATAGCATGGGGTTGTTG GACTGGAGATAAAGGAGGAGATGGTCTAAAACCCTGGCGAGGACGGCATC ACAATCAAGTGCATCAGCGTTCGTCTCCAAAAGGCCCGAATTTAGGTTAA ACCAAATTCCGTTACGGCCGTGGTAGCCTATGCCCCGACCGAGGAAGCGC CGGAGGGGCAGAAGGTCAAATACATGGCAGCTCTGAACTGCACCGTAGCA TCAGTACCTGCTCGGGAATACGTCTTCGCTTCAACAGACGCGAACGCCAG GACAGGAAAGACGGGTGAGGGCGGAGGAGAAACCGACAGCAAAGTGTTGG GCGCATATGCCCGAGACAAGCTCAACGACAACGGCAAACCACTGCTGGGT TTCGCAGATGACAACAAGCTCGCTCTTCTGAACAGTTTCTTTCGCACCCC CAAAAGTGGCGTGTCTTATACGTTCCAGAGCGCCAATCGCAGCAAGGGAC AAGCATGTTTGGATTGTATTTTGACAAATCAGGCGGACCGCCGTCTCCTC CGCTGCGGTAACGTCCGTCGGCCTTAGAGGACCAGAATCGGATCACAATC TCGTGTACACCAAAGTCCGCATCCCACGCAGGTCCGCACCAAACCGGAGG AAGAGGGACAGTACCGAGGAAACTCCGAAGCTGGCCGACCTTAGGTGGTT GATGACTGACCCGACCCTTCGATGCCAGGTTGCGAACGCGATGGTTGACG CCTACTGCCAATCCCCGATGGCATCTTCATCGGTGACATCGCCACCGACA TGGCCGACGTCATGCTTTCCACTGCGGACAAATTGGTACCGCGCTCTAAG CGCCCACGCGGAGCACAGGGTTGGTGCGCGGGGCCCGGTGTGGAAGCTAA AATGAATGCAGCATGGAAACAGAAAGTGGATGCGAGGAGGCACCTACGCG CAGAACCCCACAGCAGAAACCTTCGAAAGGCCGTGAAGATGGCTGGAAAA AACCTTCGGAAGGTGCGCAAGGCTGCCGTGCTGAGCTTCTTTTGGGGCTT CGATCGCAAACTCGAAACACGCACTCGAGAAGGCGACTGGGTTGTTTTTT ACAAGCACCTTAAGCTGATGAACCTGGAAGGGAAGCGGGACCGCAGCTCA GCGTACGTCAAAGACGAGAACGGCGTCCTCCTGAGGGACGTTGAACTCAT CCGCGAACGATGGATCCGGTGGTTCCACACTCTCCTCAACGCCAAGTCAC CGAGGCTTGACCCGAACATCGCTGAAGACCTTGATCAGTGGCCCGAAAAC ATGCCGCTAGGAGTTCAGCCCACGGTGCAGGAGCTGACAGCCACCATCTG CTCGTTGGTGAACGGAAAAGCTGTCGGACCGGACGGAGTCTCCGCTGAGC TGTTCAAGATCACCTTCAACGGTGATCCTGTCCTGCGCCGGAGACTGCTC GATATTGTTGTTGTATTTTGGGGGGGAGGGCGAGGTGCCGCAGCAGTGGA AAGATGCCATTGTCATGGTACTCCACAAAAAGAAGGATCGGACAGAGTGC GGCAACTACAGGGGCATCTCGCTGGTAGCGCATGCCGGCAGGATACTGCT GAAAATCATCGTTCACCGCCTCAGCGAGTACTGTGAGCGCGAGGGGATCT TGCCGGAGGAACAGAGTGATTTCCGACCAAACCGTTCTACAACCGATATA ATGTTTGTGATTCGTCGGTTGCGGGAGGTGGCCCGGAAGAAACGAATTCC GTTTTATGTATGCTTTGTCGACCTTACCAAAGCGTACGACTCCGTTGATC GAACCCTCCTCTGGACAATACTCGCCCGTTTTGGTGTGCCACAGAATATG ATCTCGGTCATTCGTCGATTCCACGATGGCATGCGAGCATGCCTGCGGCT CGACGACAGGGTGTGCTCGAGGTGGTTTGCTGTGGAACAAGGTTTTTGTC AAGGGTGCGTACTTGCGCCTCTCCTGTTCAACATATTTTTCACGGCGGTT ATAAACGTGGGCTCCACGCGTTTTAAGGCGGACGAAGGCATCATGGACAC TTTGGTACACACGAGGAAGAAAAGGGAGTGGGGGGCGCGGGGAAGCAACC TCCGGAGAGTCAGTCCTGGCGACGCCGCTTTGGGGCATGCTTTACACTGA CGATGCCGGGGTCGTCTCGAGATCACCCGAGCAGCTGAGGAAGATTATGG AGGTGATCGTGGTCGTGCGCGCGGCGTTTGGCCTCACCGTCATCGAAGGC CAAGACTGAGATCATGTTTTCACGCGCGAAGGTGATGCTGGAGTCCACCG CCACATTCAGCGTAGAGGCAGCGGGCCAGGTGTACAACCAGACGAACGAA TTTGCATACCTAGGGGGAAACGACAACTATAACGCCGACCTGTCCATCGA GGTCGACCGGCGCATACGCAATGCATGGTGCAGCTTCCGGAAGTACACCC TCGAACTGTACGGCCGACCGAGCGCTCTCCTCGAACTCAAAATACGGATG CTAACAGCCGAGGTACTCGAGACAATACTGTACGCCTGCGTCACGTGAAG CCCGCGCGCGTGCCACTACGACACGCTGCGCTGAGCCTACAACAGCTTCT TGACTCGCTGTATCGGTTGGCGAAAGCAAATCGTGCCGACCACCCGATTT CCTATCTGGACACGCTTGTCAAGATGGGAATCGAGAGCATCGAGGCGACT TTACGCAGAACGCGTATTCTGTTTGCGGGATTTGTAGCGCGCATGAAGGA TACGAGACTGCCGAAGTGCGTGATGTTCGAATAGATGGTGGGGGGCGCGG ACTGTGTGGGGGGCCAGGAAAAAGAATGGATGGGGTGTTTCCTGGACGAC CTCAGAGCTTTCGGCATCAACGCCAACCAGTGGACGATTGCAGCCCAGGG CGAGGGGGAATGGCACAGAACGGCAGAACAAGGGCCCTGGGCGGAACAAT TCATGGCAAAATGGATCGCTGCAGAGAAAACCAAGGCTGGACTACGGCAT GCAGTGGTATGCCCGAACGTGACGGGAAGGACCAAGGAGAGGATAGCCCA AAGCAAGCGGGCTTGTGCTGGTTCACTCGCCCTTACCGGTATTGACTAGC CACAAGTGGCGCGAACTTGTGCCCTCCGGGCGTTTGGTTTGCAGATGTCA TGGCGTATTTTTCTGGTGTTACGTTTGTTTTGTTTTGCTTCGTTCTCGTC TCTATGCTTTCGTTGAAGTCGCGGCCCTTCGTTCAATCGTCCTTCGGTAT GCAGGCGCCTCGATAGCCACACGTGTTTACTTTTTTTTTTGGAGATGTTG GCTTTTCCGAGTACTTTCTGTACCATTTTCGCTTTATCTTTGTATTATAG TACGTCGTACATTCTTTCCTTCCGAATGGTGTTTTTCTACCTTGTGACCA CGGGCTGGAGTTTTTACATCAGCTTGTGTAAGAATTCAATCAATCAATCA AAAATCGCCTGTTAGAACAAAATATCCACACTGGATACACAGGGGCCCCG ATATTGTATTGTCACCCGATTGGTCTATTAATAGTAGGTAACCCCGCACA CGAGCTACTAGTGCGGAAGTCTTTGGTTCGATTCTTATTTACCAAAGCAG GATTTTTATTCTGGTGTCCGTAGTGGAAAGCTTGAGAACATGATTACGAA GTAAAATCCAACCATTAGTTGACGAGTTGTAAGAGTCCTGGACTTGCATC GCGATAATAATCGAGAAGCGGGGAGAAATGGGACGATCCTTAGTGATCAC AACAGGCAGGATGGTAACGTTGCAGTGGGGTTGGGGATCTAGCACGTTGA GGCCCTTCGGCCATAAGTTAGACACAAACAAAACAAAACAAAATTGGTAA AATATCTACAAGAATAATATTAGACAAGGTAGGTTAGGGCACATTAATAT ACATACGTGGTATACAATGAAGAAGTGTCTATCACAAGGAAACATGGGAC CAATAACGGTTATTGGGCGACGAGGAGTCAAAAATATTAAGAACATACAT ACATGCAAGTTTTACACTTTCTTCAAAAGTCTTCACCCACCGACACGCAT ACTTTTACGGAAATTGACGCGGTTGGGTTTGAGTGGGTACATCCATACGG GATTTAGTTGGGTTTCCGGTGATAGTCTTTTTAGGTCAACATGAAAATGT CGCCAAAAAGCTCTCCGTTACCCCACGGGTATACTTTTACGCCAAACACC AGAGTAGGTTCTAAACTACTTCAAGCACGACATGATAGGATCCAATGAGG AAGAAGATCACCGGTTCGCGACTCTCCTACGAAAATAAGCTAAGACCAAT CCCGCAACTGTCTATGCAAGGGAGCATTTGGCGTGTGTTTATGTTTCGTT ATCCCAATATTGAATATCCGTGCTTTCCCTTCCAAACAGAGGCTTTTGTA CGAAAGCCGTGCGCGAGCGTTAGCTACCCGCGAGAAGTATGCCTCCATGG GCAAACATGAGCGACAGTGCGCGGCCATCTTGTCATTGCAGAGGGTAAGC TCTTGGCTGCTCGGCGTACTCTGCAAGCCATATAGGTATTTGGTTTGCAC CGAGATAGAGCAGCGTGCTCACGTCCCTTTAGCGGAGTATGAACCCTCAT TTCAAGTGATATGAAAGTACTGTATCATGTATTATAGTGTTAAACTGCGT AAAAATGGCACTACGCGCGATAACCTAACCTCTTTTGTAGCCTAGTTTTT TGTGGAGGTTGGTCGTTTTTCACTGCCCCTCCTAGTAGGATCCAGAATCA ACCATGCTTGAACCTCTACGCTCTCTCTTCATGTAATTACCTTGATTCTT TTGTTGCCAGGCCTGGCGGTCATATAAGCTGAAAAGGCTTATACCCCTCA CGATCCAGTGCATGCGAAATGCCCGTCGATGGACCCCTGCCACGTTGTTC AAAATGTACGTGTCATTGGAACTTCAAGTGGAGGCTGAGAGGCAGGCGAG GCGAAACTGGCAAGGAGTGCTCAAGGACGCCTCCATCAGAACTGGGGACA TCAGAGGTCGGCAAAAACTTGAACCCTGGGAATCTACAGCCTTTTGTCTC GGCCACCGAAGGACCGTGAATGTCCGTGTGAAACTATGTAGAGAAGATAA GACGTCATCGTGTCCATCCCACTCCATGGGGGACACAATATACGTTTTCT CTTGCGCCTAAGGTGTCTATCTGGGCTATCAGTACGTCCCTTTCTAAAGT AACACCGAATCGCAACTGACACTACTACTGCTACTACTACAGTATCTTTG TCTTCCCAACTCCTCCCGTGACAGAATTATCAAGTAGTACGCCGCCGCGG GTTGTGTACGACAAAGCTCTAACGGAAGAAGGATTCATCGGTTTCGCAAG AGATCTCGATCTCCTAGCGCTTCCATTTGTGACCCATGCCGGGCTCGCCT CTCTTTTTAGGAAACATGCTTGTCACATGAGTCCTGGGTGAGAAGCGATG TGCATGCGCTCTTGTTCTACAACACACCACGTTTAGTTTGTGTACCGGGA AGAAATGCCGTTCGTGCGCAAAGAACGAACTATTAATATTCAAGGGGAGG AGCTGAGCATGTATGACAGTATATATAGACATGCTCGCCGAAGCCCATTT GCCGGTTTTCTGGCGAGCGCAGATCCCCATTACAATCGATCTCGTTCGAG TTAACTTCCTGTTGAAAAATACCAACTATCAATTGTACAGTATCTGTATC CTTCGCGTCGGTATCGGGTCACTTTTGGTATATTTTGGTTCTTGACACAA ACTTATGAGACGTCGCGTGACGTCTTCTGCACATATTTTTCAAGACACCT TCCTCAGCGAACATCGCTGTGTCCGTGATTTTCCAGAGTCGTCTTACGAT CAAGGGCTAAAGGCCTCTTCGGTCATTTCTGTAAGTTGAGGAGGGAAAAT ATACTGGGAAAGGAGGAGATAGACAAACTGCTACAATCCTTAGGACTGCC AAATGTTTCGGACCAGGAAGCTCTGTGAGTCTAACTGTGGATGGGTAGAG CTAAAAGGTCAGCGATACGAGGGGTGGAGCCGAGTAGTAAGAGGTTAAAC GGCTGGAATTTTATTACTATAACTATAGACATATGTTTGTTGTAGTGGTT GATCACGGGTATGTCAGAGCGGTGCAATGCTGACAGTCTAGTGCAAAAGT GTTCTCTCGTCAAAATAGAGGAGTCATCGTCTCGGGCCACTGAAAATTAA CAGACACAAAAGGCGATCAGTTTTCTTACTTAAACTTCGGCAGGTATAGA GCTTGCAGTTGCTGAGTCACAACATAGATAAAAAATAATCACCTTTCTCT AACGCGCCAATCTTGTCTAATCTTCTCTTTTCTTTATCCAACCGCTTGGT AAGATCCTACACCTTTGCAAACGGCACTTGGGACTTGCATGGATTCTTGC GGCATTTGCACGATCGCGGTTGGATTCCAAGTGTCAGAGACGATGACGTG CAGGTACAGTTAAGACGCACGCCCATGGCATGTCTCCGTAAATGGCTGAA CCAGTGTCAGTGTACTTTTATGTCACTTGCATGATATATACTGTACTGTA TAAAGGAAACATTATTAATATTTTGTAGAAGTAGTATGTTTCTCTCCGAT CTTAAAAAAATACACGTACTTGTATCAGCAAGCACAGTAGTTTGAGAAAT ACTTCCTGTACTGCGAAAAGTAGCCACTCTTGCGGTCACCATTAACTTGT TGGTGGCTACCAAATACCGTAAGAATCTGGGATATCCCTTAACATGCACA AATGTCTTTTCAAATCCCAATACGTCATCCGTGAGGTGCCAACTTTAGTA TTGCCTGAAGGTCATAATGTAAAATTTAATATCTTCACATACTTACACAG TCGTGTTTCTACTTTTGGAAAGTACCGAAAGTCGTGCTCTCCGTGCTTCA TGTACGAAAGGCGCTGACTGGACGCGAGCTTGTGATCTATTTACGATCTC AACAAAACTTTAAGTGGAGACTCAAGAGCCCCCCGATGGCACGTGTCACC CCAAGCAGGAAATCAACGATTACGACGAGTGTTGTGCGAGCGGATCGCAG GGTTCTGAAGGTTATACAAGCAGTTCCGCGGGCCCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig791:7129..21214+

>mRNA_F-serratus_M_contig791.19194.1 ID=mRNA_F-serratus_M_contig791.19194.1|Name=mRNA_F-serratus_M_contig791.19194.1|organism=Fucus serratus male|type=CDS|length=1848bp|location=Sequence derived from alignment at F-serratus_M_contig791:7129..21214+ (Fucus serratus male)
ATGAACTCACATATAAAGAGGCGAGAACGAGGGGTCGTTCTTCCAGAAGT
ACGGTCCCTGGTCGATGGTAGACCCGACAACATTGGGACGCTTGTAACGA
GTGACTCGAGGAAGCGTCAACGTCGAACTGCGCGGGGAAAGCAGATGAAC
TCACATATAAAGAGGCGAGAACGAGGGGTCGTTCTTCCAGAAGTACGGTC
CCTGGTCGATGGTAGACCCGACAACATTGGGACGCTTGTAACGAGTGACT
CGAGGAAGCGTCAACGTCGAACTGCGCGGGGAAAGCAGAGGCTTTTGTAC
GAAAGCCGTGCGCGAGCGTTAGCTACCCGCGAGAAGTATGCCTCCATGGG
CAAACATGAGCGACAGTGCGCGGCCATCTTGTCATTGCAGAGGAGGCTTT
TGTACGAAAGCCGTGCGCGAGCGTTAGCTACCCGCGAGAAGTATGCCTCC
ATGGGCAAACATGAGCGACAGTGCGCGGCCATCTTGTCATTGCAGAGGGC
CTGGCGGTCATATAAGCTGAAAAGGCTTATACCCCTCACGATCCAGTGCA
TGCGAAATGCCCGTCGATGGACCCCTGCCACGTTGTTCAAAATGTACGTG
TCATTGGAACTTCAAGTGGAGGCTGAGAGGCAGGCGAGGCGAAACTGGCA
AGGAGTGCTCAAGGACGCCTCCATCAGAACTGGGGACATCAGAGGCCTGG
CGGTCATATAAGCTGAAAAGGCTTATACCCCTCACGATCCAGTGCATGCG
AAATGCCCGTCGATGGACCCCTGCCACGTTGTTCAAAATGTACGTGTCAT
TGGAACTTCAAGTGGAGGCTGAGAGGCAGGCGAGGCGAAACTGGCAAGGA
GTGCTCAAGGACGCCTCCATCAGAACTGGGGACATCAGAGAATTATCAAG
TAGTACGCCGCCGCGGGTTGTGTACGACAAAGCTCTAACGGAAGAAGGAT
TCATCGGTTTCGCAAGAGATCTCGATCTCCTAGCGCTTCCATTTGTGACC
CATGCCGGGCTCGCCTCTCTTTTTAGGAAACATGCTTGTCACATGAGTCC
TGGAATTATCAAGTAGTACGCCGCCGCGGGTTGTGTACGACAAAGCTCTA
ACGGAAGAAGGATTCATCGGTTTCGCAAGAGATCTCGATCTCCTAGCGCT
TCCATTTGTGACCCATGCCGGGCTCGCCTCTCTTTTTAGGAAACATGCTT
GTCACATGAGTCCTGGAGTCGTCTTACGATCAAGGGCTAAAGGCCTCTTC
GGTCATTTCTGTAAGTTGAGGAGGGAAAATATACTGGGAAAGGAGGAGAT
AGACAAACTGCTACAATCCTTAGGACTGCCAAATGTTTCGGACCAGGAAG
CTCTAGTCGTCTTACGATCAAGGGCTAAAGGCCTCTTCGGTCATTTCTGT
AAGTTGAGGAGGGAAAATATACTGGGAAAGGAGGAGATAGACAAACTGCT
ACAATCCTTAGGACTGCCAAATGTTTCGGACCAGGAAGCTCTATCCTACA
CCTTTGCAAACGGCACTTGGGACTTGCATGGATTCTTGCGGCATTTGCAC
GATCGCGGTTGGATTCCAAGTGTCAGAGACGATGACGTGCAGATCCTACA
CCTTTGCAAACGGCACTTGGGACTTGCATGGATTCTTGCGGCATTTGCAC
GATCGCGGTTGGATTCCAAGTGTCAGAGACGATGACGTGCAGGAAATCAA
CGATTACGACGAGTGTTGTGCGAGCGGATCGCAGGGTTCTGAAGGTTATA
CAAGCAGTTCCGCGGGCCCCGAAATCAACGATTACGACGAGTGTTGTGCG
AGCGGATCGCAGGGTTCTGAAGGTTATACAAGCAGTTCCGCGGGCCCC
back to top